BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473479
Length=2154
Score E
Sequences producing significant alignments: (Bits) Value
AT1G32970.1 | Symbols: | Subtilisin-like serine endopeptidase ... 2239 0.0
AT1G32980.1 | Symbols: | Subtilisin-like serine endopeptidase ... 1164 0.0
> AT1G32970.1 | Symbols: | Subtilisin-like serine endopeptidase
family protein | chr1:11948721-11951982 REVERSE LENGTH=2205
Length=2205
Score = 2239 bits (1212), Expect = 0.0
Identities = 1543/1704 (91%), Gaps = 17/1704 (1%)
Strand=Plus/Plus
Query 458 TCTCTCCTAGAGACTTCAACGGTCACGGGACACACGTGGCTGCAACCGCTGCTGGCTCGT 517
||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
Sbjct 512 TCTCTCCTAGAGACTTCGACGGTCACGGGACACACGTGGCTGCAACAGCTGCTGGCTCAT 571
Query 518 TTGTCGCGGACGC-AAGCTACTTAGCTCTGGGGAGAGGAACCGCTAGAGGTGGAGCCCCT 576
||||| ||||| | || |||||||| || |||||||||||||||||||| || |||||
Sbjct 572 TTGTCCCGGACACGAA-CTACTTAGGACTTGGGAGAGGAACCGCTAGAGGCGGGGCCCC- 629
Query 577 A-GGGCCCGCATTGCTATGTACAAGGCTTGTTGGCACTTAGCATCTATAGGAACAGCTAC 635
| |||| ||||| |||||||||||||||||||||||||||| | || |||| || ||||
Sbjct 630 ACGGGCACGCATAGCTATGTACAAGGCTTGTTGGCACTTAG--T-TACAGGAGCAACTAC 686
Query 636 TTGTTCAGCTGCAGATATGTTGAAAGCAATAGACGAAGCCATTCACGATGGTGTAGACGT 695
|||||||||||| ||| || | ||||||||||| ||||| |||||||||||||| |||||
Sbjct 687 TTGTTCAGCTGCGGATTTGGTAAAAGCAATAGATGAAGCTATTCACGATGGTGTCGACGT 746
Query 696 TTTGTCAATCT-CGACATCGTTCCCAATTCCTCTGTTTCCGGAAGTGGACGCTCGGGACG 754
|||||| |||| | || | ||| | ||||||||||||||||||||||| ||| ||||
Sbjct 747 TTTGTCGATCTCCAACGGC-TTCTCGGTTCCTCTGTTTCCGGAAGTGGACACTCAAGACG 805
Query 755 CTATGGCGGTTGGAGCGTTTCATGCGGTTGCCAAGGGAATTCCCGTCGTCTGTTCCGGTG 814
| |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct 806 GTGTGGCGGTTGGAGCGTTTCATGCAGTTGCCAAGGGAATTCCCGTCGTTTGTGCCGGTG 865
Query 815 GTAACGCGGGT-CCTGCTTCTCAAACCGTTACCAACACGGCTCCTTGGATCATTACCGTT 873
| ||||| ||| ||| ||||||| || ||| ||||||||||||||||||||||||||||
Sbjct 866 GCAACGCTGGTCCCT-CTTCTCAGACTATTAGCAACACGGCTCCTTGGATCATTACCGTT 924
Query 874 GCTGCAACCACTCAAGATCGGTCTTTTCCAACACTTATTACACTAGGCAACAATATTACT 933
||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| | ||
Sbjct 925 GCTGCAACCACTCAAGATCGGTCTTTTCCCACATTTATTACACTTGGCAACAATGTCAC- 983
Query 934 A-TTGTGGGTCAAGCATTGTATCAAGGTCCAGACATGGATTTCACCGGGCTGGTTTACCC 992
| ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||
Sbjct 984 AGTTGTGGGTCAAGCATTGTATCAAGGTCCAGATATTGATTTCACCGAGCTGGTTTACCC 1043
Query 993 CGAAGGTCCAGGAGCAAGCAACGAGACATTTTCCGGAGTTTGTGAAGATCTTGCCAAGAA 1052
|||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1044 TGAAGATTCAGGAGCAAGCAACGAGACATTTTATGGAGTCTGTGAAGATCTTGCCAAGAA 1103
Query 1053 TCCAGCTCGTATAATAAAAGAAAAGATTGTTTTGTGTTTCACAAAATCGACGGA-TTATG 1111
||||||| ||||||| ||||||||||||| || ||||||||||||||||| || ||||
Sbjct 1104 CCCAGCTCATATAATAGAAGAAAAGATTGTCTTATGTTTCACAAAATCGAC-GAGTTATA 1162
Query 1112 GTACCGTGATCCAGGCTGCATCAGATGTATTTAACCTTGATGGCTACGGCGTGATCGTAG 1171
||||| |||| |||||||||||||||||| |||| ||||||||||||||||||||||| |
Sbjct 1163 GTACCATGATTCAGGCTGCATCAGATGTAGTTAAACTTGATGGCTACGGCGTGATCGTTG 1222
Query 1172 CAAGAAATCCAGGCTATCAGCTTAATCCATGCGACGGTTTTCCCTGTCTCGCTGTAGATT 1231
|||||||||| ||| ||||||||| ||||||| |||||| ||||| || ||||| ||||
Sbjct 1223 CAAGAAATCCGGGCCATCAGCTTAGTCCATGCTTCGGTTTCCCCTGCCTTGCTGTCGATT 1282
Query 1232 ACGAACTAGGAACCGATATACTCTTCTACATACGTTCCTCTAGATCACCAGTCGCCAAGA 1291
||||||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1283 ACGAACTTGGAACTGATATACTCTTCTACATACGTTCCACTAGATCACCTGTCGCCAAGA 1342
Query 1292 TTCAACCTACAAGAACGTTGGTTGGAATTCCCGTGGCTACAAAGGTCGCGACTTTCTCAT 1351
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1343 TTCAACCTACAAGAACGTTGGTTGGACTTCCCGTGGCTACAAAGGTCGCGACTTTCTCAT 1402
Query 1352 CGAGAGGACCTAGTTCGATCTCTCCTGCAATTCTCAAGCCTGATATTGCAGCACCTGGAG 1411
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1403 CGAGAGGACCTAATTCCATCTCTCCTGCAATTCTCAAGCCTGATATTGCAGCACCTGGAG 1462
Query 1412 TGAACATACTCGCAGCTACTTCTCCAAACGATACATTCTATGACAGAGGATTTGCTATGA 1471
| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 1463 TAAACATACTCGCAGCGACTTCTCCAAATGATACATTCTATGACAAAGGATTTGCTATGA 1522
Query 1472 AATCAGGAACATCAATGTCGA-CTCCTGTTGTTGCAGGAATTGTAGCACTCCTTAAGTCT 1530
|||||||||| || ||||| | ||||||||||||||||||||||||||||||| ||||||
Sbjct 1523 AATCAGGAACGTCGATGTC-AGCTCCTGTTGTTGCAGGAATTGTAGCACTCCTCAAGTCT 1581
Query 1531 TTGCACCCTCATTGGTCTCCTGCCGCCATTAGATCCGCCATTGTTACTACAGCTTGGAGA 1590
|||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1582 GTGCACCCTCATTGGTCGCCTGCTGCCATTAGATCCGCCATTGTTACTACAGCATGGAGA 1641
Query 1591 ACGGATCCATCCGGTGAACCCATTTTCGCAGACGGATCAAACCGTAAATTAGCTGATCCA 1650
|| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1642 ACAGATCCGTCCGGTGAACCCATTTTTGCAGACGGATCAAACCGTAAATTAGCTGATCCA 1701
Query 1651 TTTGACTACGGAGGAGGCGTTGTGAACTCAGAGAAAGCCGCAAAACCCGGTCTTGTTTAC 1710
|||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct 1702 TTTGACTACGGAGGAGGCGTTGTGAATTCAGAGAAAGCAGCAAACCCCGGTCTTGTTTAC 1761
Query 1711 GATATGGGAGTTAAGGATTATGTTCTCTACTTGTGCTCCGTTGGTTACACAGATTCATCC 1770
|||||||||||||| ||||| | ||||||||||| || ||||||||||||||||||||
Sbjct 1762 GATATGGGAGTTAAAGATTACATCCTCTACTTGTGTTCAGTTGGTTACACAGATTCATCT 1821
Query 1771 ATTACTAGACTCGTCCGGAAGAAGACGGTTTGTGCAAACCCTAAGCCTTCTGTTCTTGAT 1830
|||||| |||||||| | |||||||| || |||||||||||||| ||||| |||||||||
Sbjct 1822 ATTACTGGACTCGTCAGCAAGAAGACAGTATGTGCAAACCCTAAACCTTCAGTTCTTGAT 1881
Query 1831 CTTAACTTGCCTTCAATCACAATCCCAAACCTTGCAAAAGAAGTTACTATCACTAGAACC 1890
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1882 CTCAATTTGCCTTCAATCACAATCCCAAACCTTGCAAAAGAAGTTACTATCACTAGAACG 1941
Query 1891 GTTACCAACGTTGGACCAGTAGGGTCAGTTTACAAGGCTGTGATTGAGGCTCCGATGGGT 1950
|||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||
Sbjct 1942 GTTACCAACGTTGGACCAGTAGGGTCAGTTTATAAGCCTGTGATTGAGGCTCCAATGGGT 2001
Query 1951 GTTAACGTGACCGTGACACCGAGGACATTAGTGTTCAACGCTAAGAACAGGAAGCTCTCG 2010
|||||||||||||||||||| || |||||||||||||| ||| | | |||||||||||||
Sbjct 2002 GTTAACGTGACCGTGACACCAAGCACATTAGTGTTCAATGCTTATACCAGGAAGCTCTCG 2061
Query 2011 TTCAAGGTCCGTGTGATAACGAACCATAGAGTGAACACTGGCTACTACTTTGGAAGCTTG 2070
|| ||||| ||||| |||||||||||| |||||||||||| ||||||||||| ||||||
Sbjct 2062 TTTAAGGTTCGTGTCTTAACGAACCATATAGTGAACACTGGATACTACTTTGGTAGCTTG 2121
Query 2071 ACTTGGACTGACTCTGTTCATAATGTGGCCATTCCTGTGTCTGTCAGAACTCAAATCTTA 2130
|||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||| |
Sbjct 2122 ACTTGGACCGACTCTGTTCATAATGTGGTTATTCCTGTGTCTGTGAGAACTCAGATCATG 2181
Query 2131 CAGCGTTATTACGATGAGAATTGA 2154
||||||||||| ||||| || |||
Sbjct 2182 CAGCGTTATTATGATGAAAACTGA 2205
Score = 435 bits (235), Expect = 1e-120
Identities = 338/385 (88%), Gaps = 18/385 (5%)
Strand=Plus/Plus
Query 1 ATGACGAAAACACCGATTCTTATGGCTATATGTCTAATGCTTGCTCTCAACATTGCTGCT 60
||||||| | ||| ||||||| |||||||||||||||||||| |||| |||| |||||||
Sbjct 1 ATGACGAGAGCACTGATTCTTGTGGCTATATGTCTAATGCTTACTCTAAACAATGCTGCT 60
Query 61 GAAACTAAGGTTCATATAGTGTATCTCGGTGA-AAGGCAACACGATGATCCTGACTCCGT 119
|| ||||||||||| ||||||||||| ||||| || |||||||||||||||||||| ||
Sbjct 61 GAGACTAAGGTTCACATAGTGTATCTAGGTGAGAA-ACAACACGATGATCCTGACTCAGT 119
Query 120 CACCGAGTCTCATCATCAGATGCTTTGGTCAATCCTTGGAAGTAAAGAAGCTGCACATGA 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 120 CACCGAGTCTCATCATCAGATGCTTTGGTCAATCCTCGGAAGTAAAGAAGCTGCACATGA 179
Query 180 TTCAATGGTGTATAGTTATCGTCATGGCTTCTCAGCTTTCGCAGCCAAACTTAC-AGATT 238
|||||| | | | ||||||||||||||||||||||||||||| || | |||
Sbjct 180 CTCAATG----AC-G----C--CATGGCTTCTCAGCTTTCGCAGCCAAACTAACCA-ATT 227
Query 239 CCCAAGTGATTCAACTCTCAGAATTCTACGAATTGCAAACAACTAGGACATGGGATTACT 298
|||||||| |||||||||||| |||||||| || || ||||||||||| ||||||||||
Sbjct 228 TCCAAGTGAATCAACTCTCAGA-TTCTACGAGTTACAGACAACTAGGACTTGGGATTACT 286
Query 299 TGA-AACATACTTCAAGACATCCAAAGAATCTTCTAAACCAAACTAACATGGGAGACAAA 357
| | |||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 287 T-ACAACACACTTCAAAACATCCAAAGAATATTCTAAACCAAACTAACATGGGAGACCAA 345
Query 358 GTCATCATTGGCGTCGTTGACTCCG 382
||||||| ||||| ||||||||||
Sbjct 346 CTCATCATCGGCGTTGTTGACTCCG 370
Score = 124 bits (67), Expect = 3e-27
Identities = 67/67 (100%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 385 ATATGGCCAGAGTCTGAATCATTCAGTGACAATGGTCTTGGACCAATACCAAAACGTTGG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 ATATGGCCAGAGTCTGAATCATTCAGTGACAATGGTCTTGGACCAATACCAAAACGTTGG 470
Query 445 AAAGGAA 451
|||||||
Sbjct 471 AAAGGAA 477
> AT1G32980.1 | Symbols: | Subtilisin-like serine endopeptidase
family protein | chr1:11954278-11955362 REVERSE LENGTH=879
Length=879
Score = 1164 bits (630), Expect = 0.0
Identities = 728/775 (94%), Gaps = 8/775 (1%)
Strand=Plus/Plus
Query 1272 TAGATCACCAGTCGCCAA-GATTCAACCTACAAGAACGTTGGTTGGAATTCCCGTGGCTA 1330
|||||| ||| ||| ||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 111 TAGATCGCCACTCG-CAAGGATTCAACCTACAAGAACGTTGGTTGGACTTCCCGTGGCTA 169
Query 1331 CAAAGGTCGCGACTTTCTCATCGAGAGGACCTAGTTCGATCTCTCCTGCAATTCTCAAGC 1390
||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct 170 CAAAGGTCGCGACTTTCTCATCGCGAGGACCTAGTTCCATCTCTCCCGCAATTCTCAAGC 229
Query 1391 CTGATATTGCAGCACCTGGAGTGAACATACTCGCAGCTACTTCTCCAAACGATACATTCT 1450
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 230 CTGATATTGCAGCACCTGGAGTGAACATACTCGCAGCTACTTCTCCAAATGATACATTTT 289
Query 1451 ATGACAGAGGATTTGCTATGAAATCAGGAACATCAATGTCGACTCCTGTTGTTGCAGGAA 1510
||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 290 ATGACGGAGGATTTCCTATGAAATCAGGAACATCAATGTCGACTCCTTTTGTTGCAGGAA 349
Query 1511 TTGTAGCACTCCTTAAGTCTTTGCACCCTCATTGGTCTCCTGCCGCCATTAGATCCGCCA 1570
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct 350 TTGTAGCACTCCTTAAGTCTTTGCACCCTCATTGGTCTCCGGCCGCCATTAGATCTGCTA 409
Query 1571 TTGTTACTACAGCTTGGAGAACGGATCCATCCGGTGAACCCATTTTCGCAGACGGATCAA 1630
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 410 TTGTTACTACAGCTTGGAGAACAGATCCATCCGGTGAACCCATTTTCGCAGACGGATCAA 469
Query 1631 ACCGTAAATTAGCTGATCCATTTGACTACGGAGGAGGCGTTGTGAACTCAGAGAAAGCCG 1690
|||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 470 ACCGTAAATTAGCTGATCCATTTGACTATGGAGGAGGCGTTGTCAATTCAGAGAAAGCCG 529
Query 1691 CAAAACCCGGTCTTGTTTACGATATGGGAGTTAAGGATTATGTTCTCTACTTGTGCTCCG 1750
| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct 530 CGAAACCCGGTCTTGTTTACGATATGGGAGTTAACGATTATGTTCTATATTTGTGCTCCG 589
Query 1751 TTGGTTACACAGATTCATCCATTACTAGACTCGTCCGGAAGAAGACGGTTTGTGCAAACC 1810
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 590 TTGGTTACACAGATTCATCCATTACTAGACTTGTCCGCAAGAAGACGGTTTGTGCAAACC 649
Query 1811 CTAAGCCTTCTGTTCTTGATCTTAACTTGCCTTCAATCACAATCCCAAACCTTGCAAAAG 1870
|||| ||||| |||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct 650 CTAAACCTTCAGTTCTTGACCTCAAATTGCCTTCAATCACAATCCCAAACCTTGCAAAAG 709
Query 1871 AAGTTACTATCACTAGAACCGTTACCAACGTTGGACCAGTAGGGTCAGTTTACAAGGCTG 1930
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 710 AAGTTATTATCACTAGAACCGTTACCAACGTTGGACCAGTAGGGTCAGTTTATAAGGCTG 769
Query 1931 TGATTGAGGCTCCGATGGGTGTTAACGTGACCGTGACACCGAGGACATTAGTGTTCAACG 1990
| ||||||||||| |||||||||||||| ||||||||||| || |||||||| |||||||
Sbjct 770 TCATTGAGGCTCCAATGGGTGTTAACGTTACCGTGACACCAAGCACATTAGTATTCAACG 829
Query 1991 CTAAGAAC-AGGAAGCTCTCGTTCAAGGTCCGTGTGATAACGAACCATAGAGTGA 2044
|||||| | ||||||||||||||||| ||||||||| | || |||||||||||
Sbjct 830 CTAAGA-CGAGGAAGCTCTCGTTCAAAGTCCGTGTGTT--CG--CCATAGAGTGA 879
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106826759760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5