BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473486
Length=1532
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33080.1 | Symbols: | MATE efflux family protein | chr1:119... 2316 0.0
AT1G33110.1 | Symbols: | MATE efflux family protein | chr1:120... 1474 0.0
AT1G33100.1 | Symbols: | MATE efflux family protein | chr1:119... 1406 0.0
> AT1G33080.1 | Symbols: | MATE efflux family protein | chr1:11985707-11990482
FORWARD LENGTH=1685
Length=1685
Score = 2316 bits (1254), Expect = 0.0
Identities = 1445/1538 (94%), Gaps = 9/1538 (1%)
Strand=Plus/Plus
Query 1 ATGGACG-GAGGAGGAGGAGAGGTGACGGAGACTCTGCTGAAAAAGACGGCGGAGAATGG 59
|||| || || ||| |||||| ||||||||||| || ||||||||| || |||||||| |
Sbjct 46 ATGG-CGAGAAGAGAAGGAGAAGTGACGGAGACCCTTCTGAAAAAGTCGACGGAGAATCG 104
Query 60 CCGAGAAGA---GGATGGATTGGGGATGAAGGAGAAGGTTTGGAGGGAATCTAAGAAGCT 116
| ||||||| |||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct 105 CGGAGAAGATCGGGATGGGTTAGGGATGAAGGAGAAGGTTTGGAGGGAATCTAAAAAGCT 164
Query 117 ATGGGTTGTGGCTGGACCTGCGATCTTTACGAGATTCTCTACGTCCGGACTTTCTTTGAT 176
||||||||||||||| || |||||||||||||| ||||| ||||||||||| ||||||||
Sbjct 165 ATGGGTTGTGGCTGGGCCGGCGATCTTTACGAGGTTCTCCACGTCCGGACTATCTTTGAT 224
Query 177 AACTCAAGCTTTCATTGGCCACCTTGGCCCAACCGAGTTGGCTGCTTACTCCATCACTCT 236
|| |||||||||||||||||| |||||| | ||||||||||| |||||||||||||||||
Sbjct 225 AAGTCAAGCTTTCATTGGCCATCTTGGCTCTACCGAGTTGGCCGCTTACTCCATCACTCT 284
Query 237 CACCGTTCTCCTCCGTTTTAGTAATGGTATCTTGTTAGGCATGGCTAGTGCCCTAGAAAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 285 CACCGTTCTCCTCCGTTTTAGTAATGGTATCTTGTTAGGCATGGCTAGTGCGCTAGAAAC 344
Query 297 ACTATGTGGTCAAGCCTACGGAGCAAAACAATATCATATGCTTGGGATCTACCTCCAAAG 356
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 345 ACTATGTGGTCAAGCCTATGGAGCAAAACAATATCATATGCTTGGGATCTACCTCCAAAG 404
Query 357 GTCATGGATCGTCCTCACAGGCTGTACCATTTGCCTCATGCCCATATACATCTTTTCGGG 416
||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||
Sbjct 405 ATCATGGATCGTCCTCACAGGCTGTACCATTTGCCTTATGCCCATCTACATCTTTGCAGG 464
Query 417 CCCTATCCTCTTGGCCTTAGGTCAAGAGGAACGCCTAGTCCGTGTGGCTCGGATCATAGC 476
|||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||
Sbjct 465 CCCTATTCTCTTGGCTTTAGGTCAAGAGGAACGCCTTGTTCGTGTGGCTCGGATCATAGC 524
Query 477 TCTATGGGTCATAGGCATTAACATCTCCTTTGTGCCTTCCTTCACTTGCCAAATGTTCCT 536
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 525 TCTATGGGTCATAGGCATCAACATCTCCTTTGTGCCTTCCTTCACTTGCCAAATGTTCCT 584
Query 537 CCAAGCTCAGAGTAAGAACAAGATCATCGCCTACGTGGCTGCTGTCTCGTTAGGGGTCCA 596
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 585 CCAAGCTCAGAGTAAGAACAAGATCATCGCCTACGTTGCTGCTGTTTCGTTAGGAGTCCA 644
Query 597 TGTCTTGTTGTCGTGGC-TCTTAGTGGTTCATTTTGATTTCGGGATCGCTGGTGCCATGA 655
|||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 645 TGTCTTCTTGTCGTGGCTTC-TAGTGGTTCATTTTGATTTCGGGATCGCTGGTGCCATGA 703
Query 656 CTTCATCGCTCATAGCGCATTGGTTGCCTAACATTGCGCAGCTCCTGTTCGTTACGTGCG 715
| || |||||| |||| |||||||||||||||||||||||| | | || || || ||||
Sbjct 704 CCTCTTCGCTCGTAGCACATTGGTTGCCTAACATTGCGCAGGTTTTATTTGTCACATGCG 763
Query 716 GTGGATGTAAGGACACGTGGAGAGGATTCTCTTGGTTGGCTTTCAAGGATCTTTGGCCCG 775
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 764 GTGGATGTACGGAAACGTGGAGAGGATTCTCTTGGTTGGCTTTCAAGGATCTTTGGCCCG 823
Query 776 TTTTTAAACTATCAGTATCTTCCGGTGGCATGATTTGCTTGGAGCTATGGTACAACTCGA 835
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 824 TTTTTAAACTATCTGTATCTTCCGGTGGCATGATTTGCTTGGAGCTATGGTACAACTCGA 883
Query 836 TCTTGATTCTGCTCACGGGAAACTTAAAAAACGCTGAGGTGGCCCTTAACGCACTTGCAA 895
||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct 884 TCTTGATTCTGCTCACGGGAAACTTGAAAAACGCTGAGGTTGCTCTTAACGCACTTGCAA 943
Query 896 TCTGCATCAATATAAATGCACTGGAGATGATGGTAGCCTTCGGCTTCATGGCAGCAGCAA 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 TCTGCATCAATATAAATGCACTGGAGATGATGGTAGCCTTCGGCTTCATGGCAGCAGCAA 1003
Query 956 GTGTAAGAGTTTCAAACGAGATCGGGAGTGGAAACTCTAAAGGAGCCAAATTTGCGACAA 1015
||||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct 1004 GTGTAAGAGTTTCAAACGAGATCGGGAGTGGGAATTCTAATGGAGCCAAATTTGCAACAA 1063
Query 1016 TAATAGTAGTTTCGACATCACTTTCAATAGGAATCATCATCTTCTTTGTCTTCCTGTTTT 1075
| | || ||||||||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct 1064 TGGTTGTGGTTTCGACATCACTTTCGATAGGAATCATCTTCTTCTTTATCTTCCTGTTTT 1123
Query 1076 TAAGAGGAAGGGTTTCATACATTTTTACAACAAGTGAAGCTGTCGCCGCACAAGTAGCCG 1135
|||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1124 TAAGAGAAAGGGTTTCATACATTTTTACAACAAGTGAAGCTGTTGCCACACAAGTAGCCG 1183
Query 1136 ATCTTTCTCCACTCTTGGCCTTCTCCATTCTCTTGAACAGTGTTCAGCCAGTTCTCTCTG 1195
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1184 ATCTTTCTCCACTCTTGGCCTTCTCCATTCTCTTGAACAGTATTCAACCAGTTCTCTCTG 1243
Query 1196 GAGTTGCTGTTGGAGCGGGATGGCAAAAATACGTTACG-TACGTTAACCTTGCTTGCTAT 1254
||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||
Sbjct 1244 GAGTTGCTGTTGGAGCGGGATGGCAGAAATATGTTACGGT-CGTTAACCTTGCTTGCTAT 1302
Query 1255 TACCTTGTTGGAATTCCTTCCGGTGTTTTTCTTGGCTATGTCGTTGGTTTACAAGTCAAA 1314
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1303 TACCTTGTTGGAATTCCTTCCGGTCTTTTTCTTGGCTATGTCGTTGGTTTACAAGTCAAA 1362
Query 1315 GGTGTTTGGTTAGGATTGATTTTCGGAATCTTCGTTCAGACTTGCGTGCTTACCGTAATG 1374
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1363 GGTGTTTGGTTAGGAATGATTTTCGGAATCTTCGTTCAGACTTGCGTGCTTACAGTAATG 1422
Query 1375 ACTATGAGGACAGACTGGGATCAACAGGTGTCTTCGTCGCTGAAACGTTTGAACCGTTGG 1434
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1423 ACTATGAGAACAGACTGGGATCAACAGGTGTCTTCGTCGTTGAAACGTTTGAACCGTTGG 1482
Query 1435 GTTGAACCAGAATCCCCAAGTCGAAATCAAACTTTACAAAACGAATGATTGTGAAGATTT 1494
|||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1483 GTTGAACCAGAATCCCCAAGTCGAAACCAAACTTTACAAAACGAATGATGGTGAAGATTG 1542
Query 1495 AAGTAAAACTTGAGTTTGTAATCGAATTTTAAATCTCT 1532
|||||||||||||||||||| ||||||||| ||| |||
Sbjct 1543 AAGTAAAACTTGAGTTTGTATTCGAATTTTGAATTTCT 1580
> AT1G33110.1 | Symbols: | MATE efflux family protein | chr1:12004927-12008833
FORWARD LENGTH=1857
Length=1857
Score = 1474 bits (798), Expect = 0.0
Identities = 1251/1468 (85%), Gaps = 37/1468 (3%)
Strand=Plus/Plus
Query 1 ATGGACGGAGGAGGAGGAGAGGTGACGGAGACTCTGCTGAAAAAGACGGCGGAGAATGGC 60
|||| |||||||||||||||| | |||| | || || ||||||||||||||||||| |||
Sbjct 158 ATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGTTGAAAAAGACGGCGGAGAACGGC 217
Query 61 CGAG-A-AG-AGGATGGA-TTGGGGATGAAGGAGAAGGTTTGGAGGGAATCTAAGAAGCT 116
||| | || ||||| || || ||| ||||| | |||||||||| ||||| ||||||||
Sbjct 218 GGAGAAGAGAAGGAT-GAGTTAGGGTTGAAGCAAAAGGTTTGGATTGAATCAAAGAAGCT 276
Query 117 ATGGGTTGTGGCTGG-ACCTGCGATCTTTACGAGATTCTCTACGTCCGGACTTTCTTTGA 175
|||| ||||||| || || |||||||| ||||||||||| |||| |||| |||| | |
Sbjct 277 ATGGATTGTGGC-GGCGCCAGCGATCTTCACGAGATTCTCAACGTTCGGAGTTTCAATAA 335
Query 176 TAACTCAAGCTTTCATTGGCCACCTTGGCCCAACCGAGTTGGCTGCTTACTCCATCA-CT 234
||| |||| ||||||| ||||| ||||| || | ||||||||||||||||| |||| ||
Sbjct 336 TAAGTCAATCTTTCATCGGCCATCTTGGTCCTATAGAGTTGGCTGCTTACTCTATCACCT 395
Query 235 CTCACCGTTCTCCTCCGTTTTAGTAATGGTATCTTGTTAGGCATGGCTAGTGCCCTAGAA 294
|||||||||||||||| ||||||||||||||||||||||| ||||| ||||| | |||
Sbjct 396 -TCACCGTTCTCCTCCGGTTTAGTAATGGTATCTTGTTAGGTATGGCCAGTGCATTGGAA 454
Query 295 ACACTATGTGGTCAAGCCTACGGAGCAAAACAATATCATATGCTTGGGATCTACCTCCAA 354
|||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct 455 ACACTATGTGGTCAAGCCTACGGAGCTAAACAAAATCATATGCTCGGGATCTACCTCCAA 514
Query 355 AGGTCATGGATCGTCCTCACAGGCTGTACCATTTGCCTCATGCCCATATACATCTTTTCG 414
||||||||||||||||| ||||| |||||||||||||||| |||| | || ||||| ||
Sbjct 515 AGGTCATGGATCGTCCTTACAGGTTGTACCATTTGCCTCACGCCCGTCTATATCTTCTCT 574
Query 415 GGCCCTATCCTCTTGGCCTTAGGTCAAGAGGAACGCCTAGTCCGTGTGGCTCGGATCATA 474
|||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 575 GGCCCTATCCTCTTAGCCTTAGGTCAAGAGGAACGCATTGTCCGTGTGGCTCGGATCATA 634
Query 475 GCTCTATGGGTCATAGGCATTAACATCTCCTTTGTGCCTTCCTTCACTTGCCAAATGTTC 534
|| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct 635 GCCCTATGGGTCATAGGCATCAACTTCTCTTTTGTGCCTTCCTTCACTTGCCAAATGTTC 694
Query 535 CTCCAAGCTCAGAGTAAGAACAAGATCATCGCCTACGTGGCTGCTGTCTCGTTAGGGGTC 594
|||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 695 CTCCAAGCTCAGAGCAAGAACAAGATCATTGCCTACGTGGCTGCTGTCTCCTTAGGGGTC 754
Query 595 CATGTCTTGTTGTCGTGGCT-CTTAGTGGTTCATTTTGATTTCGGGATCGCTGGTGCCAT 653
|||||||| ||||||||||| |||| |||||||||| |||| |||||| ||||||| ||
Sbjct 755 CATGTCTTCTTGTCGTGGCTACTTA-TGGTTCATTTCAATTTTGGGATCACTGGTGCTAT 813
Query 654 GACTTC-ATCGCTCA-TAGCGCAT-TGGTTGCCTAACATTGCGCAGCTCCTGTTCGTTAC 710
||| || | |||| | | ||| | ||||||||||| ||||| || ||| ||||||| ||
Sbjct 814 GACCTCTA-CGCT-AGTTGCGT-TCTGGTTGCCTAATATTGCCCAACTCTTGTTCGTCAC 870
Query 711 GTGCGGTGGATGTAAGGACACGTGGAGAGGATTCTCT-TGGTTGGCTTTCAAGGATCTT- 768
||||||||| ||||||||||| ||||||||||||||| || | ||| ||||| ||| ||
Sbjct 871 GTGCGGTGGGTGTAAGGACACATGGAGAGGATTCTCTATGAT-GGCCTTCAAAGAT-TTA 928
Query 769 TGGCCCGTTTTTAAACTATC-AGTATCTTCCGGTGGCATGATTTGCTTGGAGCTATGGTA 827
|||||||| || ||||| || | | ||||||||||| ||| |||||||||| ||||||||
Sbjct 929 TGGCCCGTCTTCAAACTTTCTA-TGTCTTCCGGTGGAATGCTTTGCTTGGAACTATGGTA 987
Query 828 CAACTCGATCTTGATTCTGCTCACGGGAAACTTAAAAAACGCTGAGGTGGCCCTTAACGC 887
|||||| |||||| | |||||||| ||||| || |||||||| || ||||| ||| | ||
Sbjct 988 CAACTCAATCTTGGTACTGCTCACTGGAAATTTGAAAAACGCAGAAGTGGCTCTTGATGC 1047
Query 888 ACTTGCAATCTGCATCAATATAAATGCACTGGAGATGATGGTAGC-CTTCGGCTTCATGG 946
||| ||||||||| |||| ||||||| ||||||||||||| |||| ||| || || |||
Sbjct 1048 ACTAGCAATCTGCCTCAACATAAATGGACTGGAGATGATGATAGCACTTGGGTTTT-TGG 1106
Query 947 CAGCAGCAAGTGTAAGAGTTTCAAACGAGATCGGGAGTGGAAACTCTAAAGGAGCCAAAT 1006
|||| ||||| |||||||| || |||||| |||| ||||||||| | ||||||||||| |
Sbjct 1107 CAGCTGCAAGCGTAAGAGTGTCCAACGAGCTCGGTAGTGGAAACCCCAAAGGAGCCAAGT 1166
Query 1007 TTGCGACAATAATAGTAGTTT-CGACATCACTTTCAATAGGAATCA-T-CATCTTCTTTG 1063
|||| ||| ||| | |||| | |||||||| || ||||||| | | | | ||||| |
Sbjct 1167 TTGCAACACTAACCGCGGTTTTC-ACATCACTCTCTTTAGGAAT-AGTTC-TATTCTTCG 1223
Query 1064 TCTTCCTGTTTTTAAGAGGAAGGGTTTCATACATTTTTACAACAAGTGAAGCTGTCGCCG 1123
||||| ||||| | |||||||| ||||| |||||||| || ||||||||||||||||| |
Sbjct 1224 TCTTCTTGTTTCTGAGAGGAAGAGTTTCCTACATTTTCACTACAAGTGAAGCTGTCGCAG 1283
Query 1124 CAC-AAGTAGCCGATCTTTCTCCACTCTTGGCCTTCTCCATTCTCTTGAACAGTGTTCAG 1182
| | |||| |||||||||||||| || || ||||| ||||| ||| |||| ||||||||
Sbjct 1284 C-CGAAGTTGCCGATCTTTCTCCGCTTTTAGCCTTTTCCATCCTCATGAATAGTGTTCAA 1342
Query 1183 CCAGTTCTCTCTGGAGTTGCTGTTGGAGCGGGATGGCAAAAATACGTTACGTACGTTAAC 1242
|| ||||||||||||||||| || ||||| ||||||||| ||| ||||| |||||||||
Sbjct 1343 CCCGTTCTCTCTGGAGTTGCCGTCGGAGCTGGATGGCAAGGATATGTTACTTACGTTAAC 1402
Query 1243 CTTGCTTGCTATTACCTTGTTGGAATTCCT-TCCGGTGTTTTTCTTGGCTATGTCGTTGG 1301
|||||||||||||||||||| ||||||||| | ||| || | ||||| |||||||||||
Sbjct 1403 CTTGCTTGCTATTACCTTGTCGGAATTCCTATT-GGTATTATCCTTGGTTATGTCGTTGG 1461
Query 1302 TTTACAAGTCAAAGGTGTTTGGTTAGGATTGAT-TTTCGGAATCTTCGTTCAGACTTGCG 1360
||| ||||| ||||| || ||| | ||| || | ||| ||||| |||||||||||||| |
Sbjct 1462 TTTGCAAGTGAAAGGCGTATGGATCGGAATGCTCTTT-GGAATATTCGTTCAGACTTGTG 1520
Query 1361 TGCTTACCGTAATGACTATGAGGACAGACTGGGATCAACAGGTGTCTTCGTCGCTGAAAC 1420
|||||||||| |||||| |||| ||||| ||||||||||||||||| ||||| ||| ||
Sbjct 1521 TGCTTACCGTCATGACTCTGAGAACAGATTGGGATCAACAGGTGTCAACGTCGTTGAGAC 1580
Query 1421 GTTTGAACCGTTGGGTTGAACCAGAATC 1448
|||| || || ||||||| |||||||||
Sbjct 1581 GTTTAAATCGGTGGGTTGTACCAGAATC 1608
> AT1G33100.1 | Symbols: | MATE efflux family protein | chr1:11997683-12001308
FORWARD LENGTH=1476
Length=1476
Score = 1406 bits (761), Expect = 0.0
Identities = 1238/1466 (84%), Gaps = 42/1466 (3%)
Strand=Plus/Plus
Query 1 ATGGACGGAGGAGGAGGAGAGGTGACGGAGACTCTGCTGAAAAAGA-CGGCGGAGAATGG 59
|||| |||| ||||||||||| | |||||| ||||| ||||||||| |||| || | |
Sbjct 1 ATGGCCGGAAGAGGAGGAGAGCTCACGGAGGCTCTGGTGAAAAAGACCGGC--AG-A--G 55
Query 60 CCGAGAAGAGGATGGA-TTGGGGATGAAGGAGAAGGTTTGGAGGGAATCTAAGAAGCTAT 118
|||||||||| || ||||||||||||||||||||||||| ||||| ||||| || |
Sbjct 56 --AAGAAGAGGAT-GAGTTGGGGATGAAGGAGAAGGTTTGGATTGAATCAAAGAAACTGT 112
Query 119 GGGTTGTGGCTGG-ACCTGCGATCTTTACGAGATTCTCTACGTCCGGACTTTCTTTGATA 177
|||||||||| || || |||||||| || |||| |||||||| |||| |||| || ||
Sbjct 113 GGGTTGTGGC-GGCGCCAGCGATCTTCACAAGATACTCTACGTTCGGAGTTTCAATGGTA 171
Query 178 ACTCAAGCTTTCATTGGCCACCTTGGCCCAACCGAGTTGGCTGCTTACTCCATCA-CTCT 236
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||| || |
Sbjct 172 ACTCAAGCTTTCATTGGCCATCTTGGCCCAACCGAGTTGGCCGCTTACTCTATCACCT-T 230
Query 237 CACCGTTCTCCTCCGTTTTAGTAATGGTATCTTGTTAGGCATGGCTAGTGCCCTAGAAAC 296
|||| ||||||||||||| |||||||||||||||||||| ||||| |||| |||| |||
Sbjct 231 CACCATTCTCCTCCGTTTCAGTAATGGTATCTTGTTAGGTATGGCCGGTGCACTAGGAAC 290
Query 297 ACTATGTGGTCAAGCCTACGGAGCAAAACAATATCATATGCTTGGGATCTACCTCCAAAG 356
| |||||||||||||||||||||| |||||||| || ||||| |||||||||||||||||
Sbjct 291 ATTATGTGGTCAAGCCTACGGAGCCAAACAATACCAGATGCTCGGGATCTACCTCCAAAG 350
Query 357 GTCATGGATCGTCCTCACAGGCTG-TACCATTTGCCTCATGCCCATATACATCTTTTCGG 415
||||||||||||||||||||| || ||||||||||||||||||| | | ||||||| |||
Sbjct 351 GTCATGGATCGTCCTCACAGG-TGGTACCATTTGCCTCATGCCCGTCTTCATCTTTGCGG 409
Query 416 GCCCTATCCTCTTGGCCTTAGGTCAAGAGGAACGCCTAGTCCGTGTGGCTCGGATCATAG 475
||||||||||||| || |||||||||||||||||| | || |||||||||||| || |||
Sbjct 410 GCCCTATCCTCTTAGCTTTAGGTCAAGAGGAACGCATTGTTCGTGTGGCTCGGGTCTTAG 469
Query 476 CTCTATGGGTCATAGGCATTAACATCTCCTTTGTGCCTTCCTTCACTTGCCAAATGTTCC 535
| ||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||| |
Sbjct 470 CCCTATGGGTCATAGGCATCAACTTCTCCTTCGTGCCCTCCTTCACTTGCCAAATGTTTC 529
Query 536 TCCAAGCTCAGAGTAAGAACAAGATCATCGCCTACGTGGCTGCTGTCTCGTTAGGGGTCC 595
||||||||||||| ||||||||||| || |||||||| |||||||||| |||||| |||
Sbjct 530 TCCAAGCTCAGAGCAAGAACAAGATTATTTCCTACGTGACTGCTGTCTCCTTAGGGCTCC 589
Query 596 ATGTCTTGTTGTCGTGGCTCTTAGTGGTTCATTTTGATTTCGGGATCGCTGGTGCCATGA 655
||||||| || ||||||||| |||||| |||||| |||| |||||| ||||||| ||||
Sbjct 590 ATGTCTTCTTCTCGTGGCTCCTAGTGGCTCATTTCAATTTTGGGATCACTGGTGCGATGA 649
Query 656 CTTC-ATCGCTCATAGCGCAT-TGGTTGCCTAACATTGCGCAGCTCCTGT-TCGTTACGT 712
| || || ||| || ||| | |||||||||| ||||| ||||||| ||| | || || |
Sbjct 650 CCTCTAT-GCTAATTGCGT-TCTGGTTGCCTATCATTGTGCAGCTCTTGTAT-GTAACAT 706
Query 713 GCGGTGGATGTAAGGACACGTGGAGAGGATTCTCT-TGGTTGGCTTTCAAGGATCTT-TG 770
| |||||||||||||| || ||||||||||||||| || ||||| ||||| ||| || ||
Sbjct 707 GTGGTGGATGTAAGGATACATGGAGAGGATTCTCTATG-TTGGCCTTCAAAGAT-TTGTG 764
Query 771 GCCCGTTTTTAAACTATCAGTATCTTCCGGTGGCATGATTTGCTTGGAGCTATGGTACAA 830
|||||| || |||||||| | ||||||||||| ||| ||||||||||| ||||||||||
Sbjct 765 GCCCGTCTTAAAACTATCTTTGTCTTCCGGTGGAATGCTTTGCTTGGAGTTATGGTACAA 824
Query 831 CTCGATCTTGAT-TCTGCTCACGGGAAACTTAAAAAACGCTGAGGTGGCCCTTAACGCAC 889
|||| | ||| | | ||||||| ||||| || |||||||| |||||||| ||| | ||||
Sbjct 825 CTCGGTATTGGTAT-TGCTCACTGGAAATTTGAAAAACGCAGAGGTGGCTCTTGATGCAC 883
Query 890 TTGCAATCTGCATCAATATAAATGCACTGGAGATGATGGTAGC-CTTCGGCTTCATGGCA 948
| ||||||||||||| ||||||||||||||||||||| |||| ||| || || |||||
Sbjct 884 TAGCAATCTGCATCAGCATAAATGCACTGGAGATGATGATAGCACTTGGGTTTT-TGGCA 942
Query 949 GCAGCAAGTGTAAGAGTTTCAAACGAGATCGGGAGTGGAAACTCTAAAGGAGCCAAATTT 1008
|||| |||||||||||| || |||||| |||| ||||||||| | ||||||||||| |||
Sbjct 943 GCAGTAAGTGTAAGAGTGTCCAACGAGCTCGGTAGTGGAAACCCCAAAGGAGCCAAGTTT 1002
Query 1009 GCGACAATAATAGTAGTTT-CGACATCACTTTCAATAGGAATCA-T-CATCTTCTTTGTC 1065
|| ||| | |||| |||| | || ||||| || |||||||| | | | | ||||| ||
Sbjct 1003 GCAACATTGATAGCGGTTTTC-ACGTCACTCTCTATAGGAAT-AGTTC-TATTCTTCGTT 1059
Query 1066 TTCCTGTTTTTAAGAGGAAGGGTTTCATACATTTTTACAACAAGTGAAGCTGTCGCCGCA 1125
|| ||||||| || ||||| |||| |||||||| || ||||||||||||||||| ||
Sbjct 1060 TTTTTGTTTTTGAGGGGAAGAATTTCCTACATTTTCACTACAAGTGAAGCTGTCGCGGC- 1118
Query 1126 C-AAGTAGCCGATCTTTCTCCACTCTTGGCCTTCTCCATTCTCTTGAACAGTGTTCAGCC 1184
| |||| || |||||||||||||| || || || ||||| ||||||||||||||||| ||
Sbjct 1119 CGAAGTTGCTGATCTTTCTCCACTTTTAGCATTTTCCATCCTCTTGAACAGTGTTCAACC 1178
Query 1185 AGTTCTCTCTGGAGTTGCTGTTGGAGCGGGATGGCAAAAATACGTTACGTACGTTAACCT 1244
|||||||||||||| || | ||||||||||||||| ||| || | |||||||||||
Sbjct 1179 TGTTCTCTCTGGAGTGGCAATCGGAGCGGGATGGCAAGGATATGTGGCTTACGTTAACCT 1238
Query 1245 TGCTTGCTATTACCTTGTTGGAATTCCT-TCCGGTGTTTTTCTTGGCTATGTCGTTGGTT 1303
|||||||||||||||||| ||||||||| | |||||| | ||||| ||||| |||||||
Sbjct 1239 TGCTTGCTATTACCTTGTCGGAATTCCTATT-GGTGTTATCCTTGGTTATGTTGTTGGTT 1297
Query 1304 TACAAGTCAAAGGTGTTTGGTTAGGATTGATTTTCGGAATCTTCGTTCAGACTTGCGTGC 1363
| ||||| |||||||| ||| ||||| || |||| ||||| |||||||||||||| ||||
Sbjct 1298 TGCAAGTGAAAGGTGTATGGATAGGAATGCTTTTTGGAATATTCGTTCAGACTTGTGTGC 1357
Query 1364 TTACCGTAATGACTATGAGGACAGACTGGGATCAACAGGTGTCTTCGTCGCTGA-AACGT 1422
| ||||| |||||| | || ||||| |||||||||||||| ||| ||||| ||| || |
Sbjct 1358 TCACCGTCATGACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAGAAA-T 1416
Query 1423 TTGAACCGTTGGGTTGAACCAGAATC 1448
| ||||| ||||||| |||||||||
Sbjct 1417 ATAAACCGGTGGGTTGTACCAGAATC 1442
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75602020770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5