BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473529
Length=3454
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33700.1 | Symbols: | Beta-glucosidase, GBA2 type family pr... 5040 0.0
AT4G10060.1 | Symbols: | Beta-glucosidase, GBA2 type family pr... 957 0.0
AT1G33680.1 | Symbols: | KH domain-containing protein | chr1:1... 431 2e-119
> AT1G33700.1 | Symbols: | Beta-glucosidase, GBA2 type family
protein | chr1:12208308-12214182 REVERSE LENGTH=3476
Length=3476
Score = 5040 bits (2729), Expect = 0.0
Identities = 3233/3473 (93%), Gaps = 47/3473 (1%)
Strand=Plus/Plus
Query 1 TCTCTCTCTCTGCTCTGGAGAATTGAACAGAGAAACCTTTTGGTCTCAGGTTTATTATAT 60
|||||||||| ||||||||||||| |||||||||| |||| | | || | ||||||
Sbjct 32 TCTCTCTCTCAGCTCTGGAGAATTAAACAGAGAAA--TTTT--T-T--GG-GT-TTATAT 82
Query 61 CAAAGATGCAAAACGTTCCTGAAGACCAAAACCAAATGGTCATAGATGATAAACTTCCTC 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 83 CAAAGATGCAAAACGTTCCTGAAGACCAAAACAAAATGGTCATAGATGATAAACTTCCTC 142
Query 121 CATTTTCATGGGAAAGGAAGTTGAACAGTCAAGCAAAGACCCCTTCTGAGTTCAAATTGA 180
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 143 CATTTTCATGGGAAAGAAAGTTGAACAGTCAAGCAAAGACTCCTTCTGAGTTCAAATTGA 202
Query 181 GTAAACGAGATCATC-TTCATCTGTTTCCATTAGGATACAGATTGTGGCGTCATACCAAA 239
||||||||||||| | | ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 203 GTAAACGAGATCA-CATGCATCTGTTTCCATTAGGCTACAGATTGTGGCGTCACACCAAA 261
Query 240 GACGAAGCCGCAAAAGGAAGGGCTTCGATCTTCGATATCTTCAGAAAACACCATATAACA 299
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 262 GACGAAGCCGCCAAAGGAAGAGCTTCGATCTTCGATATCTTCAGAAAACACCATATTACG 321
Query 300 GGAGATCATGGAGTCCCTTTGGGAGGAATTGGTGCAGGAAGCATTGGAAGGAGTTACAAG 359
|||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 322 GGAGATCACGGTGTCCCTTTAGGAGGAATTGGTTCAGGAAGCATTGGAAGGAGTTACAAG 381
Query 360 GGTGAGTTTCAGCAGTTCAAGCTATTCCCAAAAATTTGTGAGGAAGCTCCAATACTCACA 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 382 GGTGAGTTTCAGCAGTTCAAGCTGTTCCCAAAAATTTGTGAGGAAGCTCCAATCCTCACA 441
Query 420 AACCAATTCTCTGCCTTTGTTTCTCGTCCTGGCGATGTGAATTACTCAACTGTTCTATGC 479
|||||||||||||| ||||||||||||||||| | |||||| ||||||||||||||||
Sbjct 442 AACCAATTCTCTGCTTTTGTTTCTCGTCCTGGAGGTGTGAAACACTCAACTGTTCTATGT 501
Query 480 CCATCAAAGCCACAAGTTATTAAAGACAATGGAGGTTATTTATGCAAAGGCCAAGTTCCA 539
|||||||||||||||||| | |||||||||||||| ||||||||| ||||||||| ||||
Sbjct 502 CCATCAAAGCCACAAGTTGTCAAAGACAATGGAGGCTATTTATGCCAAGGCCAAGCTCCA 561
Query 540 AATATAGGAATTGAGTCTTGGGACTGGAACATGACAGGGGAAAAATCTACCTACCATGCT 599
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 562 AATATGGGAATTGAGTCTTGGGACTGGAACATGACAGGGGAAAAATCTACTTACCATGCT 621
Query 600 CTTTATCCGAGGTCTTGGACCGTCTATGATGGTGAACCTGACCCTGAACTCAGAATAGTT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 CTTTATCCGAGGTCTTGGACCGTCTATGATGGTGAACCTGACCCTGAACTCAGAATAGTT 681
Query 660 TCTCGTCAAGTCTCTCCCTTTATACCTCATAATTACGAGGAAAGCAGTCTTCCGGTTTCA 719
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 682 TCACGTCAAGTCTCTCCCTTTATACCTCATAATTACGAGGAAAGCAGTCTTCCGGTTTCG 741
Query 720 GTTTTCAACTTCACGGTGACTAATACTGGAGCAGAACAAGCAATTGTTACTCTGCTCTTT 779
||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||
Sbjct 742 GTTTTCAACTTCACGGTGACTAATACTGGAGCAGAACCAGCAATTGTAACTTTGCTCTTT 801
Query 780 ACTTGGGAGAATTCTGTGGGAGGAGCCTCTGGATTAACTGGACAGCACTTTAACTCAACA 839
||||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||
Sbjct 802 ACTTGGGAGAATTCTGTGGGAGGTGCTTCTGGACTAACTGGACAACACTTTAACTCAACT 861
Query 840 ATGAAGGCAAAAGATGGAGTTCATGCAGTAGCCTTACAGCACAAGACAGCAAATGGACAC 899
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 ATGAAAGCAAAAGATGGAGTTCATGCAGTAGCCTTACAGCACAAGACAGCAAATGGACAC 921
Query 900 CCACCAGTTAGCTATGCAATTGCGGCAAAAGAAACAGAGGATGTTCGTGTCTCCTCGTGT 959
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 922 CCACCTGTTAGCTACGCAATTGCGGCAAAAGAAACAGAGGATGTTCGTGTCTCCTCATGT 981
Query 960 CCTTGTTTTATAGTTTCGGGCACTACTCCTAA-CAAAATCACAGCAGGAGATATGTGGGA 1018
|||||||| || ||||| |||||||||||||| |||| ||||||||||||||||||||||
Sbjct 982 CCTTGTTTCATTGTTTCTGGCACTACTCCTAATCAAA-TCACAGCAGGAGATATGTGGGA 1040
Query 1019 TGAGATTAAAAAGAATGCATCATTCGACAAGTTGACCAGCAATGCATGCTCTCCTTCAAA 1078
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1041 TGAGATTAAAAAGAATGCATCATTCGACAAGTTAACCAGCAATGCATGCTCTCCTTCGAA 1100
Query 1079 ACCTGGAACTTCCATTGGAGCAGCCATAGCAGCAAAAGTGAAAGTTCCACCAGGCTGTGA 1138
|||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 1101 ACCTGGAACTTCCATTGGAGCAGCCATAGCAGCAAAGGTGAAAGTTCCACCGGGATGTGA 1160
Query 1139 CCGAACAGTCACATTTTCGCTCTCTTGGGATTGTCCCGAGGCTAGATTCGATGAGAAGAC 1198
||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1161 CCGCACAGTCACATTTTCCCTCTCTTGGGATTGTCCCGAGGCTAGATTCGACGAGAAGAC 1220
Query 1199 TTACCATAGACGATACACAAGATTCTACGGAAGTTTAGGAAATGCAGCGGTAGCAATGGC 1258
||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct 1221 TTACCATAGACGATACACAAGATTCTATGGTAGTTTAGGAAATGCTGCGGTAGCAATGGC 1280
Query 1259 TCACGACGCTCTTTTAAACTTTTCTGAATGGGAAACTCAGATTGAAGAGTGGCAAGCTCC 1318
||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1281 TCACGACGCTCTTCTCAACTTTCCTGAATGGGAAACTCAGATTGAAGAGTGGCAAGCTCC 1340
Query 1319 TATTCTTGCTGACACAACACTTCCTGAGTGGTATCGAATAACTCTCTTCAACGAACTATA 1378
| |||||||||||||||||||||||||||||||| || |||| |||||||| ||||||||
Sbjct 1341 TGTTCTTGCTGACACAACACTTCCTGAGTGGTATAGAGTAACCCTCTTCAATGAACTATA 1400
Query 1379 CTATTTCAACTCAGGGGGGACCATGTGGACTGATGGTTTACCTCCAAAGCAAAGCTTAGA 1438
||||||||||||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct 1401 CTATTTCAACTCAGGAGGAACAATGTGGACCGATGGTTTACCTCCAAAGCAAAGCTTAGA 1460
Query 1439 TAGTATAGGAAGGAGAAAGATCTCTCTCAGTATATCAACCACT-GACAATACTGATCCAG 1497
|||||||||||| ||||||||||||||| || ||||||||| | ||||| | ||||| ||
Sbjct 1461 TAGTATAGGAAGAAGAAAGATCTCTCTCGGTTTATCAACCA-TAGACAAAAATGATCAAG 1519
Query 1498 ACCAGAACGACATAGCCTTAGACATCCTGGGAAGAATCGATGCGGTCTGCTCACAGATTC 1557
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 ACCAGAACAACGTAGCCTTAGACATCCTGGGAAGAATCGATGCGGTCTGCTCACAGATTC 1579
Query 1558 ATGCTCCTTTATCCTCAAATGCTGCGCTTGGAA-CTACTATGATTCAGAACACCTCAGAG 1616
| ||||||||| |||||||||||||||| |||| | |||||||||||||||||| |||||
Sbjct 1580 ACGCTCCTTTAACCTCAAATGCTGCGCTCGGAAAC-ACTATGATTCAGAACACCACAGAG 1638
Query 1617 AACATTGGACAATTCCTTTACCTAGAAGGAATTCAATATCTAATGTACAATACTTATGAT 1676
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1639 AACATTGGACAGTTCCTTTACCTAGAAGGAGTTCAATATCTAATGTACAATACTTATGAT 1698
Query 1677 GTTCATTTCTACTCTTCTTTCGCATTGCTTATGCTTTTTCCAAAACTTGAGCTAAGTATC 1736
|||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||
Sbjct 1699 GTTCATTTCTACTCCTCTTTTGCATTGCTCATGCTTTTTCCAAAAATTGAGCTAAGTATC 1758
Query 1737 CAGAGAGATTTCGCGGCTGCGGTTCTGATGCATGATTCCAGCAAGAAACAGGTCATGAGC 1796
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1759 CAGAGAGATTTCGCGGCTGCGGTTCTGATGCATGATTCTAGCAAGAAACAGGTCATGAGC 1818
Query 1797 TCTGGCGAATTTGTTACCAGAAAAGCTCTAGGAGCTGTTCCTCATGATATCGGTTTGAAC 1856
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 1819 TCTGGCGAATTTGTTACCAGAAAAGTTCTAGGAGCTGTTCCTCATGATATTGGTTTGAAC 1878
Query 1857 GATCCTTGGTTTGAAGTTAATGCTTATAACTTGTTCAACACGGATAGATGGAAAGACTTG 1916
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1879 GATCCTTGGTTTGAACTTAATGCTTATAACTTGTTCAACACGGATAGGTGGAAAGACTTG 1938
Query 1917 AACTCCAAGTTTGTTCTTCAAGTTTACAGAGATGTGGTTGCGACTGGTGACCTGAACTTT 1976
||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct 1939 AACTCCAAGTTTGTTCTTCAAGTTTACAGAGATGTGGTTGCAACTGGTGACTTAAACTTT 1998
Query 1977 GCGAAAGCGGTTTGGCCATCGGTTTACACTGCCATTGCTTACTTGGACCAGTTTGATAAA 2036
||||||||||||||||| |||||||||||||| || || |||||||||||||||||||||
Sbjct 1999 GCGAAAGCGGTTTGGCCGTCGGTTTACACTGCAATCGCCTACTTGGACCAGTTTGATAAA 2058
Query 2037 GACGGAGATGGGATGATTGAGAACGAAGGGTTTCCAGATCAGACTTATGACGCATGGTCT 2096
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 2059 GACGGAGACGGGATGATTGAAAACGAAGGGTTTCCAGATCAGACTTATGACGCGTGGTCT 2118
Query 2097 TGCTCGGGAGTTAGCGCTTACTGCGGTGGTCTCTGGGTCGCAGCTCTTCAGGCCGGATCT 2156
||||| |||||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct 2119 TGCTCAGGAGTTAGTGCTTATTGCGGGGGTCTTTGGGTCGCGGCTCTTCAGGCCGGATCT 2178
Query 2157 GCGTTGGCCCGTGAAGTTGGGGACAACGGAGCTGCGGTTTACTTCAACGCTAAGTATGAG 2216
||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 2179 GCGTTGGCCCGTGAAATTGGGGACAATGGGGCTGCAGTTTACTTCAACGCTAAGTATGAG 2238
Query 2217 AAAGCGAGAAGCGTTTACGAGAAGCTTTGGAACGGTTCTTATTTCAATTACGACAATAGT 2276
||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2239 AAAGCTAGAAGCGTTTACGAGAAGCTTTGGAACGGTTCTTATTTCAATTACGATAACAGT 2298
Query 2277 CGAAGCGGCTCGAGCTCGTCGATCTTGGCTGATCA-ATTGGCTGGACAATGGTACGCGAG 2335
||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 2299 CGAAGCGGCTCGAGCTCGTCGATCTTGGCTGATCAGAT-GGCTGGACAATGGTATGCGAG 2357
Query 2336 AGCTTGTGGACTGAAGCCGATAGCGAAAGAAGAGTGGATAAAGAAAGCATTGGAGACGGT 2395
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2358 AGCTTGTGGACTGAAGCCGATAGCGAAAGAAGAATGGATAAAGAAAGCGTTGGAGACGGT 2417
Query 2396 CTACGACTTCAATGTGATGAGAGTGAGAGATGGGACACGTGGTGCTGTGAACGGGATGTT 2455
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2418 CTACGACTTCAATGTGATGAGAGTGAGAGATGGAACACGTGGTGCTGTGAACGGGATGTT 2477
Query 2456 ACCTGATGGACGAGTAGACACAAGCACGATGGTATCGAGGGAGGTTTGGGCCGGGACTAC 2515
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 2478 ACCTGATGGACGAGTAGACACAAGCACGATGGTGTCGAGGGAGGTTTGGGCTGGGACAAC 2537
Query 2516 ATACTCGGTTGCGGCTTGTATGATACAAGAAGGGCTTGCAGATAAAGGTTTTAGGACAGC 2575
||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 2538 ATACTCGGTCGCGGCTTGTATGATTCAAGAAGGGCTTGCGGATAAAGGTTTTAGGACAGC 2597
Query 2576 AAGTGGAATCTATGAGGCCGCTTGGTCCGACCGTGGTCTCGGCTGCGCATTTCAGACACC 2635
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2598 AAGTGGAATCTATGAGGCCGCTTGGTCCGACCGTGGTCTAGGCTGCGCATTTCAGACACC 2657
Query 2636 AGAGGCATGGACCACGAACGATGAGTATAGGTCACTTTGTTACATGAGGCCATTAGCTAT 2695
|||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 2658 AGAGGCATGGACCACGAACGATGAATATAGGTCACTTTGCTACATGAGGCCTTTAGCTAT 2717
Query 2696 ATGGGGTATACAATGGGCACACACAATGCCACAACCTAACAGAGAACAAGAAGTATCTCT 2755
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 2718 ATGGGGTATACAATGGGCACACACAATGCCAAAACCTAACAGAGAACAAGAAGTATCGCT 2777
Query 2756 CAGGCAACAAGAGGAAGATGCAACGTCTGTGTTATTTCAACAACACGCTGGGTTTATCAA 2815
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2778 CAGGCCACAAGAGGAAGATGCAACGTCTGTGTTGTTTCAACAACACGCTGGGTTTATCAA 2837
Query 2816 AGTGGCTCACTATCTGAAAAACACCAAGGGAAAGGACCATAGAAACCGCCTTCAGACTGC 2875
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2838 AGTGGCTCACTATCTGAAAAACACTAAGGGAAAGGACCATAGAAACCGCCTCCAGACTGC 2897
Query 2876 GTACGAGACCTTCCTCAGGGTAATTCGCCTATAAGCCAGGGCAAGACCTAACTATGAGTC 2935
||| ||||| ||||||| | ||||||||||| |||||| || ||||||||| || |||
Sbjct 2898 GTATGAGACATTCCTCAAGACGATTCGCCTATAGGCCAGGCCACGACCTAACTTTGCGTC 2957
Query 2936 GCAGGACATCCA-GTTCTGTTCAGAGATATCCATTCCTTATTTTTGGTCTCTTTTACTAT 2994
||||||||||| |||||||||||| ||||||| | ||||||||||||||||| || |
Sbjct 2958 TCAGGACATCCAAGTTCTGTTCAGA--TATCCATAC-TTATTTTTGGTCTCTTTCACGGT 3014
Query 2995 TGTTGCTACCCTCTTCTATGTGTTTATTTCAATTGTTGGATATTATTACTTTACCATTGT 3054
| |||| |||||||| |||| |||||||||| |||||||||| |||| ||||| ||| |
Sbjct 3015 TTTTGCGACCCTCTTTTATGCGTTTATTTCATTTGTTGGATA--ATTAATTTACGATTAT 3072
Query 3055 AGACAGAAGCAAATGTTAATAATTAACTTTCTACTCT--ACA--GCACAGAGAAATTATC 3110
|||||||||||||||||||||| | ||||||||| | ||| || | ||| || ||
Sbjct 3073 AGACAGAAGCAAATGTTAATAA--A-CTTTCTACTGTCGACAATGCTTA-AGAT-TT-TC 3126
Query 3111 CTGTAACAAGGCTCTCAAAACCTAGCACTACTGAAATTAAAGaaaaaaaaaaa-aaaaaC 3169
||||||||||||||| || |||| | ||||||||| ||| ||||||||||| ||||||
Sbjct 3127 -TGTAACAAGGCTCTCGAA-CCTAACTCTACTGAAAAAAAA-AAAAAAAAAAACAAAAAC 3183
Query 3170 TGAAGCAAGAATCAGTAAAAATGATCACAACTTCTTAGAAATACCTTAAGCAATAGCAGC 3229
||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 3184 TGAAGCAAGAAACTGTAAAAGTGATCACAACTTCTTAGAAACACCTTAAGCAATAGCAGC 3243
Query 3230 AATACAGATACAGAAGAGGAGCGAATTAGGGTGTACTCAGATCACAGTGCAAAATCTAAA 3289
| |||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||
Sbjct 3244 AGTACAGATACAGAAGAGGAGCGAATTAGGGTTTACTCAGATCACAGTACATAATCTAAA 3303
Query 3290 GGGAGAATGAGTCATGCATGTTTAGATCCAACAATTATAAGAAGACATATC-A---G--G 3343
||||||||||||||||||| |||||||||||| |||||||||||||||| | | | |
Sbjct 3304 GGGAGAATGAGTCATGCATATTTAGATCCAACGATTATAAGAAGACATAACGAACAGCTG 3363
Query 3344 AGGAACTGCTGAGGCT--GTCTCAAACACGATGTGCAGTTTCCGAATGCAAGTCTACTAA 3401
|||||||||| | ||| ||||||| || |||||||||||| |||||||||||||||||
Sbjct 3364 AGGAACTGCTAATGCTCTGTCTCAATCAGGATGTGCAGTTTAGGAATGCAAGTCTACTAA 3423
Query 3402 CCTTGCATTAGTTATGATCTTCTGGAGAGCCGCATCATAAGCCTGGTCTGCAT 3454
|||||||||| ||||||||||| | ||||| |||||||||||||||||||||
Sbjct 3424 CCTTGCATTACATATGATCTTCTAGCGAGCCACATCATAAGCCTGGTCTGCAT 3476
> AT4G10060.1 | Symbols: | Beta-glucosidase, GBA2 type family
protein | chr4:6288827-6295402 FORWARD LENGTH=3034
Length=3034
Score = 957 bits (518), Expect = 0.0
Identities = 1105/1378 (80%), Gaps = 82/1378 (6%)
Strand=Plus/Plus
Query 89 AAAC-CAAATGGTCATAGATGATAAACTTCCTCCATTTTCATGGGAAAGGAAGTTGAACA 147
|||| |||||||| | |||| | ||| |||| | | | ||| || ||||||||||||
Sbjct 156 AAACTCAAATGGTTGGAAATGAGAGACTACCTCAAGTAACGTGGCAACGGAAGTTGAACA 215
Query 148 GTC-AAGCAAAGACCCCTTCTGAGTTCAA-ATTGAGTA-AACGAGATCATCTTCATCTGT 204
| | ||| |||| ||||||||||||||| | |||||| || ||||| |||||||||||
Sbjct 216 G-CAAAGTGAAGAACCCTTCTGAGTTCAAGA-TGAGTATAA-GAGATGTTCTTCATCTGT 272
Query 205 TTCCAT-TAGGATACAGATTGTGGCGTCATACCAAAGACGAAGCCGCAAAAGGAAGGGCT 263
|||| | |||| || |||||||||||| | || ||||| || || ||||||||| |
Sbjct 273 TTCC-TCTAGGCTATAGATTGTGGCGTTACACTAAAGAAGAGGCAAAAAAAGGAAGATTT 331
Query 264 TCGATCTTCGATATCTTCAGAAAA-CACCATATAACAGGAGATCATGGAGTCCCTTTGGG 322
||||| | ||||||||||| |||| | |||| ||| ||| || ||||| ||||| || ||
Sbjct 332 TCGATGTACGATATCTTCA-AAAAGCGCCATGTAAGAGGCGACCATGGTGTCCCATTAGG 390
Query 323 AGGAATTGGTGCAGGAAGCATTGGAAGGAGTTACAAGGGTGAGTTTCAGCAGTTCAAGCT 382
|||||||||| ||||||||| |||||||||||||| ||||| ||||||||||| |||||
Sbjct 391 TGGAATTGGTGGAGGAAGCATCGGAAGGAGTTACAAAGGTGAATTTCAGCAGTTTAAGCT 450
Query 383 ATTCCCAAAAATTTGTGAGGAAGCTCCAATACTCACAAACCAATTCTCTGCCTTTGTTTC 442
||||| ||||||||||| ||||||||||| ||||||||||| ||||||| ||||| ||
Sbjct 451 CTTCCCTAAAATTTGTGAAGAAGCTCCAATCCTCACAAACCAGTTCTCTGTTTTTGTGTC 510
Query 443 TCGTCCTGG-CGATGTGAATTACTCAACTGTTCTATGCCCATCAAAGCCACAAGTTATTA 501
| || || | | ||| ||||| ||||||||||||||| |||||||| || | |
Sbjct 511 GAGACCCGGTGGCT-TGAGCTACTCCACTGTTCTATGCCCAACAAAGCCA-AA---A-T- 563
Query 502 AAGACAATGGAGGTTATTTATGCAAAGGCCAAGTTCCAAATATAGGAATTGAGTCTTGGG 561
| || ||| || | || ||| | | | ||||||| || || ||||
Sbjct 564 CTG-TAA--AAGG-TA---AAACAGAGG---A--T-----T-TAGGAATAGAATCATGGG 605
Query 562 ACTGGAACAT-GACAGGGGAAAAATCTACCTACCATGCTCTT-TATCCGAGGTCTTGGAC 619
|||||||||| || |||||| ||||||||||| |||||| || ||||| |||||||||||
Sbjct 606 ACTGGAACATGGA-AGGGGACAAATCTACCTATCATGCT-TTGTATCCAAGGTCTTGGAC 663
Query 620 CGTCTATGATGGTGAACCTGACCCTGAACTCAGAATAGTTTCTCGTCAAGTCTCTCCCTT 679
|| ||| | || ||||||||||||||||||||||||||||||||||| || || ||
Sbjct 664 CG--TAT-ACAACGAGCCTGACCCTGAACTCAGAATAGTTTCTCGTCAAGTGTCGCCTTT 720
Query 680 TATACCTCATAATTACGAGGAAAGCAGTCTTCCGGTTTCAGTTTTC-AACTTCACGGTGA 738
|||||||||||| ||| ||||||||||||||||||| || |||||| || || ||| |||
Sbjct 721 TATACCTCATAACTACAAGGAAAGCAGTCTTCCGGTATCGGTTTTCGAATTT-ACGATGA 779
Query 739 CTAATACT-GGAGCAGAACAAGCAATTGTTACTCTGCTCTTTACTTGGGAGAATTCTGTG 797
||| || ||| |||| |||||| |||||| ||||||||||||||||||| || |||
Sbjct 780 GTAAC-CTTGGAAAAGAAGAAGCAACGGTTACTTTGCTCTTTACTTGGGAGAACTCAGTG 838
Query 798 GGAGGAGCCTCTGGATTAACTGGACAGCACTTTAACTCAACAATGAA-GGCAAA-AGATG 855
|||||||| ||||| ||||||||| | ||||| ||||||||||| || || ||| |||||
Sbjct 839 GGAGGAGCTTCTGGTTTAACTGGAGAACACTTCAACTCAACAAT-AATGG-AAAGAGATG 896
Query 856 GAGTTCATGCAGTAGCCTTACAGCACAAGACAG-CAAATGGACACCCACCAGTTAGCT-A 913
|||| |||||| ||| ||||| |||||||| | ||| |||||| || ||||||| || |
Sbjct 897 GAGTACATGCAATAGTTTTACATCACAAGACGGGCAA-TGGACATCCGCCAGTTA-CTTA 954
Query 914 TGCAATTGCGGCAAAAGAAACAGAGGATGTTCGTGTCTCCTC-GTGTCCTTGTTT-TATA 971
|| ||||| || |||||||||||||||||| |||||| | |||||| || || | ||
Sbjct 955 CGCTATTGCAGCGCAAGAAACAGAGGATGTTCATGTCTC-TGAGTGTCCATGCTTCT-TA 1012
Query 972 GTTTCGGG-CACTACTCCTAACA-AAATCACAGCAGGAGATATGTGGGATGAGATTAAAA 1029
||||| || |||| ||||||| | ||||||||||| ||| |||||||||||||||||||
Sbjct 1013 GTTTCTGGTCACT-CTCCTAA-AGAAATCACAGCAAAAGAGATGTGGGATGAGATTAAAA 1070
Query 1030 AGAATGCATCATTCGACAAGTTGACCAGC-AATGCATGCTCTCCTTCAAAACCTGGAACT 1088
|||| |||||||||| |||| | |||| || || |||| ||||| | ||| |||||
Sbjct 1071 AGAACAAATCATTCGACGAGTTAAACAGCGAAC-CAGGCTCACCTTCGAGACCCGGAACA 1129
Query 1089 TCCATTGGAGCAGCCATAGCAGCAAAAGTGAAAGTTCCACCAGGCTGTGACCGAACAGTC 1148
|||||||||||||||||||| || |||||||| ||||| ||||| |||||||| || |||
Sbjct 1130 TCCATTGGAGCAGCCATAGCTGCTAAAGTGAAGGTTCCTCCAGGTTGTGACCGTACTGTC 1189
Query 1149 ACATTTTCGCTCTCTTGGGATTGTCCCGAGGCTA-GATTCGATGAGAAGACTTACCATAG 1207
|| ||||| ||||| ||||| ||||| |||| | | ||| |||| ||||||||||| ||
Sbjct 1190 ACGTTTTCACTCTCATGGGACTGTCCTGAGG-TGCGGTTCAATGAAAAGACTTACCACAG 1248
Query 1208 ACGATACACAAGATTCTACGG-AAGTTTAGGAAATGCAGCGGTAGCAA-TGGCTCACGAC 1265
||||||||||| |||||| || || || ||| ||||||| || | || |||| | ||||
Sbjct 1249 ACGATACACAAAATTCTATGGCAACTT-AGGCGATGCAGCAGT-GAAAATGGCCCGCGAC 1306
Query 1266 GCTCTTTTAAACTTTTC-T-GAATGGGAAACTCAGATTGAAG-AGTGGCAA-GCTCCTAT 1321
|||||| |||| || | | || ||||| |||||||||||| | |||||| || |||||
Sbjct 1307 GCTCTTCTAAA-TTA-CGTTGATTGGGAGTCTCAGATTGAAGCA-TGGCAAAGC-CCTAT 1362
Query 1322 TCT-TGCTGACACAACACTTCCTGAGTGGTATCGAATAACTCTCTTCAACGAACTATACT 1380
||| | | ||||| ||||||||||| ||||| ||| | ||||| ||||||||||||||||
Sbjct 1363 TCTCT-CAGACACTACACTTCCTGACTGGTACCGAGTTACTCTATTCAACGAACTATACT 1421
Query 1381 ATTTCAACTCAGGGGGGACCATGTGGACTGATGGTTTACCTCCAAAGCAAAGCTTAGA 1438
|||||||||| || || || || ||||| ||||| || ||||| ||| ||||| ||||
Sbjct 1422 ATTTCAACTCCGGAGGAACTATCTGGACAGATGGCTTGCCTCCCAAGGAAAGCATAGA 1479
> AT1G33680.1 | Symbols: | KH domain-containing protein | chr1:12203945-12208698
FORWARD LENGTH=2819
Length=2819
Score = 431 bits (233), Expect = 2e-119
Identities = 315/353 (89%), Gaps = 11/353 (3%)
Strand=Plus/Minus
Query 3111 CTGTAACAAGGCTCTCAAAACCTAGCACTACTGAAATTAAAGaaaaaaaaaaa-aaaaaC 3169
|||||||||||||||| |||||| | ||||||||| ||| ||||||||||| ||||||
Sbjct 2779 CTGTAACAAGGCTCTC-GAACCTAACTCTACTGAAA-AAAAAAAAAAAAAAAACAAAAAC 2722
Query 3170 TGAAGCAAGAATCAGTAAAAATGATCACAACTTCTTAGAAATACCTTAAGCAATAGCAGC 3229
||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 2721 TGAAGCAAGAAACTGTAAAAGTGATCACAACTTCTTAGAAACACCTTAAGCAATAGCAGC 2662
Query 3230 AATACAGATACAGAAGAGGAGCGAATTAGGGTGTACTCAGATCACAGTGCAAAATCTAAA 3289
| |||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||
Sbjct 2661 AGTACAGATACAGAAGAGGAGCGAATTAGGGTTTACTCAGATCACAGTACATAATCTAAA 2602
Query 3290 GGGAGAATGAGTCATGCATGTTTAGATCCAACAATTATAAGAAGACATATC-A---G--G 3343
||||||||||||||||||| |||||||||||| |||||||||||||||| | | | |
Sbjct 2601 GGGAGAATGAGTCATGCATATTTAGATCCAACGATTATAAGAAGACATAACGAACAGCTG 2542
Query 3344 AGGAACTGCTGAGGCT--GTCTCAAACACGATGTGCAGTTTCCGAATGCAAGTCTACTAA 3401
|||||||||| | ||| ||||||| || |||||||||||| |||||||||||||||||
Sbjct 2541 AGGAACTGCTAATGCTCTGTCTCAATCAGGATGTGCAGTTTAGGAATGCAAGTCTACTAA 2482
Query 3402 CCTTGCATTAGTTATGATCTTCTGGAGAGCCGCATCATAAGCCTGGTCTGCAT 3454
|||||||||| ||||||||||| | ||||| |||||||||||||||||||||
Sbjct 2481 CCTTGCATTACATATGATCTTCTAGCGAGCCACATCATAAGCCTGGTCTGCAT 2429
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 171922113661
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5