BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473571
Length=1984
Score E
Sequences producing significant alignments: (Bits) Value
AT1G34180.2 | Symbols: anac016, NAC016 | NAC domain containing ... 2139 0.0
AT1G34190.1 | Symbols: anac017, NAC017 | NAC domain containing ... 736 0.0
> AT1G34180.2 | Symbols: anac016, NAC016 | NAC domain containing
protein 16 | chr1:12448726-12451287 FORWARD LENGTH=1898
Length=1898
Score = 2139 bits (1158), Expect = 0.0
Identities = 1506/1666 (90%), Gaps = 56/1666 (3%)
Strand=Plus/Plus
Query 317 GTCTATCGATGTTGAAGACGGGAGATCGACAGTGGTTCTTTTTCACTCCAAGGAATAGGA 376
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 224 GTCTATCGATGTTGAAGACGGGAGATAGACAGTGGTTCTTTTTCACTCCAAGGAATAGGA 283
Query 377 AGTATCCAAACGCAGCTAGGTCAAGCAGAGGTACTGCTACTGGGTATTGGAAGGCAACGG 436
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| || |
Sbjct 284 AGTATCCTAACGCAGCTAGGTCAAGTAGAGGTACTGCAACTGGTTATTGGAAGGCGACAG 343
Query 437 GAAAGGATCGAGTCATTGAGTACAATTCCAGATCGGTTGGACTCAAGAAGACTCTTGTTT 496
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 344 GAAAGGATCGAGTCATTGAGTACAATTCAAGATCTGTTGGACTCAAGAAGACTCTTGTTT 403
Query 497 TCTATAGAGGTCGGGCTCCTAATGGTGAGCGAACTGACTGGGTGATGCACGAGTACACGA 556
||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |
Sbjct 404 TCTATAGAGGTCGTGCTCCTAATGGTGAGAGAACTGACTGGGTGATGCATGAGTACACTA 463
Query 557 TGGATGAAGAAGAGCTCGGGAGATGTAAGAACGCCAAGGAGTATTATGCTCTTTATAAGC 616
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 464 TGGATGAAGAAGAGCTAGGGAGATGTAAGAACGCTAAGGAGTATTATGCTCTTTATAAGC 523
Query 617 TGTACAAGAAAAGTGGGGCTGGTCCCAAAAATGGTGAACAGTATGGTGCTCCGTTTCAAG 676
| || ||||| |||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 524 TTTATAAGAAGAGTGGGGCTGGTCCTAAGAATGGTGAACAGTATGGTGCTCCGTTCCAAG 583
Query 677 AAGAAGAATGGGTTGATAGTGATAGTGAAGATGCAGATAATGTTGCTGTACCGGATTATC 736
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 584 AAGAAGAATGGGTTGATAGTGATAGTGAAGATGCAGATAGTGTCGCTGTACCGGATTATC 643
Query 737 CTGTGGTTCGTTATGAGAACAGTCGTCGTGCGGATAATATTAAATTTTCCAATCCTGTCA 796
| ||||| ||||||||||| ||| | ||| |||| ||| |||||||| |||||||||||
Sbjct 644 CCGTGGTCCGTTATGAGAATGGTCCTTGTGTGGATGATACTAAATTTTGCAATCCTGTCA 703
Query 797 ATCTTCAGTTAGAGGATATCGAGAAGCTTCTCAATGAAGTCCCAGATGCACCCGGGGTTA 856
| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 704 AACTTCAGTTAGAGGATATTGAGAAGCTTCTCAATGAAATCCCAGATGCACCCGGGGTTA 763
Query 857 ACTCAA-GACAATTCAATGAGTTTGTTGGTGCTCCGCAGGGTAATAGCGCAGAAGTGATA 915
|| ||| |||| || ||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct 764 AC-CAAAGACAGTTTGATGAGTTTGTTGGTGTTCCACAGGGTAATAGTGCAGAAGTGATA 822
Query 916 GAAAGCACATTGCTGAATAATTCTTCTGGAGAGTTTCTTGACCCCCGGAA-AATTGGAGT 974
| ||||||||||||||||||||||||||||||| | ||||||| |||| ||| ||| |
Sbjct 823 CAGAGCACATTGCTGAATAATTCTTCTGGAGAGTATATTGACCCTCGGACGAAT-GGAAT 881
Query 975 GTTCTTGCCAAATGGCCAGCCATACAACAGGCACTCGAGTTTTCAGTCCCAACTGAAGTC 1034
|||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |
Sbjct 882 GTTCTTGCCAAATGGCCAGCTATACAACAGGGACTCGAGTTTTCAGTCCCATTTGAA-T- 939
Query 1035 AGCAAACTCATTTGAGGCTACCTCTGGTATGGCACCTCTTCTAGATTTTGAGAAGGAGGA 1094
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 940 -------TCATTTGAGGCTACCTCTGGTATGGCACCTCTTCTAGATAATGAGAAGGAGGA 992
Query 1095 GGACTACATTGAAATGGATGATCTTCTGATCCCTGAACTCGGAGCTTCT-CTAACTGAGA 1153
| |||||||||||| ||||||||||||||||||| ||||| |||||| | ||| ||||
Sbjct 993 G---TACATTGAAATGAATGATCTTCTGATCCCTGAGCTCGGTGCTTCTTC-AACAGAGA 1048
Query 1154 AATCCACAGAGTTCTTGAGAC-ACGGTGAATTTGGTGATGTTAATGAATATGACCAATTG 1212
|||||||||||||||||| || | |||||||||||||||||||||||||| |||||||||
Sbjct 1049 AATCCACAGAGTTCTTGA-ACCATGGTGAATTTGGTGATGTTAATGAATACGACCAATTG 1107
Query 1213 TTCCATGACATTCTCGTGTCTTTGGATGACCCTGTTTTTCAGGGAACTTCTACAAATCTG 1272
||| ||||||| || | |||||||||||||||||||||| |||||
Sbjct 1108 TTCAATGACAT--------------AT--C--TGTTTTTCAGGGAACTTCTACAGATCTG 1149
Query 1273 TCTTCTCTGAGTAATTTTACTAATAACACATCAGACCAGAGACAGCAAT-ACCTTAATCA 1331
|||| ||||||||||||||||||||||||||||| ||| |||||||||| || ||| | |
Sbjct 1150 TCTTGTCTGAGTAATTTTACTAATAACACATCAGGCCAAAGACAGCAATTACTTTA-TGA 1208
Query 1332 ACAGTTTCAGTACCAGGCCCCTGAGAACCAGCTGAATAACTTCATGTATCCTAGTACCAC 1391
|||||| ||||||||| | |||||||||||||| ||||||| |||| |||||||||||||
Sbjct 1209 ACAGTTCCAGTACCAGACACCTGAGAACCAGCTTAATAACTACATGCATCCTAGTACCAC 1268
Query 1392 TATTAATCAGTTCACTGACAATATGTGGTTTAAAGATGATCAGGCTGCTCTCTTTGTTCA 1451
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1269 TCTTAATCAGTTCACTGACAATATGTGGTTTAAAGATGATCAGGCTGCTCTCTATGTTCA 1328
Query 1452 ACCAC-A-A-TCTTCTTCTGGAGCATTCGCTTCACAGTCAACAGGTGTGATGCCTGAGTC 1508
||||| | | |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1329 ACCACCACAATCTTCTTCTGGAGCATTCACTTCACAGTCAACAGGTGTGATGCCTGAGTC 1388
Query 1509 TATGAATCCCACTATGAGTGTAAATCCCCAAGACAAGGAAGGCCAAAATGGTGGTGGAAC 1568
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 1389 TATGAATCCCACTATGAGTGTAAATCCCCAATACAAGGAAGGACAAAATGGTGGTGGAAC 1448
Query 1569 AAGGAGCCAGTTCTCATCAGCTCTGTGGGAATTATTGGAATCAATACCATCAACACCAGC 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1449 AAGGAGCCAGTTCTCATCAGCTCTGTGGGAATTATTGGAATCAATACCATCAACACCAGC 1508
Query 1629 CTCTGCCTGTGAGGGTCCTCTTAACCAGACCTTTGTGCGTATGTCTAGCTTCAGCCGGAT 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1509 CTCTGCCTGTGAGGGTCCTCTTAACCAGACCTTTGTGCGTATGTCTAGCTTCAGCCGCAT 1568
Query 1689 CAGGTTCAATGGAACGTCAGTGGCTAGTAGAAAAGTCACTTTAGCAAAGAAGCGTATCAG 1748
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1569 CAGGTTCAATGGAACGTCAGTGACTAGTAGAAAAGTCACTGTAGCAAAGAAGCGTATCAG 1628
Query 1749 TAACAGAGGTTTTCTTCTGTTATCAATTATGGGTGCTTTGTGTGCCATCTTCTGGGTGTT 1808
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1629 TAACAGAGGTTTTCTTCTGTTATCAATTATGGGTGCTTTGTGTGCTATCTTCTGGGTGTT 1688
Query 1809 CATAGCCACAGTTGGAGTTTTGGGAAGACCTGTCTTGTCGTGACCTAGACTCTTGTTTCA 1868
|| |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct 1689 CAAAGCCACCGTTGGAGTTATGGGAAGACCTCTCTTGTCGTGACCTAGACTCTTGAATCT 1748
Query 1869 GGATAAATTAGAAGAAAGCATGATCCTCATCTTTGGTTATGTATAGAGTTT-AA----TT 1923
||| | | ||| ||| |||||| |||||||| ||||||||||||||| || ||
Sbjct 1749 TGATTCAGCATAAGTTAGCCTGATCCACATCTTTGATTATGTATAGAGTTTGAAAGAGTT 1808
Query 1924 -----CTTAACAAATGGCttttttttttCTTCTGGATTCTCTGATG 1964
||||||||| | ||| ||||||| |||||||||||||||
Sbjct 1809 TAATTCTTAACAAAAGA-TTTCTTTTTTC--CTGGATTCTCTGATG 1851
Score = 311 bits (168), Expect = 2e-83
Identities = 182/189 (96%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 130 ATGGTTGATTCTTCTCCTGATTCGTGTTTCAAAGCTGGTAAGTTTAGCGCTCCAGGTTTT 189
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGGTTGATTCTTCTCGTGATTCGTGTTTCAAAGCTGGTAAGTTTAGTGCTCCAGGTTTT 60
Query 190 CGATTTCACCCGACTGATGAAGAGCTTGTGGTTTATTATCTTAAGAGGAAGATCTGTTGT 249
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CGATTTCACCCTACTGATGAAGAGCTTGTGGTTTATTATCTTAAGAGGAAGATCTGTTGT 120
Query 250 AGAAAACTTAGAGTCAACGCCATTGGTGTCGTTGATGTCTACAAAGTCGATCCTTCTGAA 309
| ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 121 AAAAAACTTCGAGTCAATGCCATTGGTGTCGTTGATGTTTACAAAGTCGATCCTTCTGAA 180
Query 310 TTGCCTGGT 318
|||||||||
Sbjct 181 TTGCCTGGT 189
> AT1G34190.1 | Symbols: anac017, NAC017 | NAC domain containing
protein 17 | chr1:12451451-12454142 FORWARD LENGTH=2180
Length=2180
Score = 736 bits (398), Expect = 0.0
Identities = 647/763 (85%), Gaps = 33/763 (4%)
Strand=Plus/Plus
Query 119 TTGTTACGGAGATGGTTGATTCTTCTCCTGATTCGTGTTTCAAAGCTGGTAAGTTTAGCG 178
|||||||| |||||| |||||||| || |||||||||||||||| || || ||||| |
Sbjct 268 TTGTTACGTAGATGGCGGATTCTTCACCCGATTCGTGTTTCAAAGGAGGCAAATTTAGTG 327
Query 179 CTCCAGGTTTTCGATTTCACCCGACTGATGAAGAGCTTGTGGTTTATTATCTT-AAGAGG 237
||||||| ||||||||||| || |||||||||||||||||| | |||||| || ||||||
Sbjct 328 CTCCAGGGTTTCGATTTCATCCAACTGATGAAGAGCTTGTGATGTATTAT-TTGAAGAGG 386
Query 238 AAGATCTGTTGTA-GAA-A-ACTTAGAGTCAACGCCATTGGTGTCGTTGATGTCTACAAA 294
|||| | ||||| ||| | |||||||| || | || ||||| |||||||| ||||||
Sbjct 387 AAGA--T-TTGTAGGAAGAGGCTTAGAGTTAATGTTATCGGTGTTGTTGATGTTTACAAA 443
Query 295 GTCGATCCTTCTGAATTGCCTGGTCTATCGATGTTGAAGACGGGAGATCGACAGTGGTTC 354
| |||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||
Sbjct 444 ATGGATCCTGAGGAATTGCCTGGTCAATCAATGTTGAAGACGGGAGATAGACAGTGGTTC 503
Query 355 TTTTTCACTCCAAGGAATAGGAAGTATCCAAACGCAGCTAGGTC-AAGCAGAGGTACTGC 413
| |||||||||||||| ||||||||||||||||||||||||||| || ||||| ||||
Sbjct 504 TATTTCACTCCAAGGAGTAGGAAGTATCCAAACGCAGCTAGGTCTAA-TAGAGGAACTGA 562
Query 414 TACTGGGTATTGGAAGGCAAC-GGGAAAGGATCGAGTCATTGAGTACAATTCCAGATCGG 472
| ||||||||||||||| || ||| |||||||||||||||||||| ||||| |||||||
Sbjct 563 AAATGGGTATTGGAAGGCTACAGGG-AAGGATCGAGTCATTGAGTATAATTCTAGATCGG 621
Query 473 TTGGACTCAAGAAGACTCTTGTTTTCTATAGAGGTCGGGCTCCTAATGGTGAGCGAACTG 532
| ||||| || ||||||||||||||||||||||| |||||||||| ||||||||| ||||
Sbjct 622 TGGGACTTAAAAAGACTCTTGTTTTCTATAGAGGCCGGGCTCCTAGTGGTGAGCGGACTG 681
Query 533 ACTGGGTGATGCACGAGTACACGATGGATGAAGAAGAGCTCGGGAGATGTAAGAACGCC- 591
| ||||||||||| ||||| |||||||||||||| || || ||||||||||||||| ||
Sbjct 682 ATTGGGTGATGCATGAGTATACGATGGATGAAGATGAACTAGGGAGATGTAAGAAC-CCT 740
Query 592 AAGGAGTATTATGCTCTTTATAAGCTGTACAAGAAAAGTGGGGCTGGTCCCAAAAATGGT 651
||||||| ||||||||||||||| ||| ||||||||||||||||||||| || ||||||
Sbjct 741 CAGGAGTACTATGCTCTTTATAAGTTGTTCAAGAAAAGTGGGGCTGGTCCTAAGAATGGT 800
Query 652 GAACAGTATGGTGCTCCGTTTCAAGAAGAAGAATGGGTTGAT-AGTGATAGTGAAGATGC 710
||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||
Sbjct 801 GAACAGTATGGTGCTCCGTTTCAAGAAGAGGAATGGGTTGATGA-TGATAATGAAGATGT 859
Query 711 -A--GATAATG-T-T-GCTGTACCGGATTATCCTGTGGTTCGTTATGAGAACAG-TCGTC 763
| | || || | | ||||| || || | |||||||||||||||||| | | |||||
Sbjct 860 GAATGCTATTGCTGTAGCTGTGCCAGAGCAACCTGTGGTTCGTTATGAGGAT-GCTCGTC 918
Query 764 GTGCGGATAATATTAAA-TTTTCCAATCCTGTCAATCTTCAGTTAGAGGATATCGA-GAA 821
||| |||| | | | | |||| |||||||| | ||||||||||||||||||||| ||
Sbjct 919 GTGTGGATGAGAGGAGACTTTTT-AATCCTGTTATTCTTCAGTTAGAGGATATCGATGA- 976
Query 822 GCTTCTCAATG-AAGTCCC-AGATGCACCCGGGGTTAACTCAA 862
||||||||||| || |||| | ||||||| || ||| |||||
Sbjct 977 GCTTCTCAATGGAA-TCCCTA-ATGCACCTGGTGTTC-CTCAA 1016
Score = 658 bits (356), Expect = 0.0
Identities = 635/766 (83%), Gaps = 34/766 (4%)
Strand=Plus/Plus
Query 1081 TTTGAGAAGGAGGAGGACTACATTGAAATGGATGA---TCTTCTGATCCCTGAACTCGGA 1137
||||||||||| | || | ||||||||||||||| |||||||||||||||| |||||
Sbjct 1170 TTTGAGAAGGA--A-GATTTCATTGAAATGGATGATCTTCTTCTGATCCCTGAATTCGGA 1226
Query 1138 GCTTC-TCTAACTGAGAAATCCACAGAGTTCTTGAGA-CACGGTGAATTTGGTGATGTTA 1195
||||| || |||||||||| || || |||||| || | || |||||||| | ||| |||
Sbjct 1227 GCTTCTTC-AACTGAGAAAGCCGCACAGTTCTCGA-ACCATGGTGAATTCGACGATTTTA 1284
Query 1196 ATGAATATGACCAATTGTTCCATGAC-ATTCTCGTGTCTTTGG--AT-GACCCTGTTTTT 1251
|||| | ||||||||||||||||||| ||| | ||||||||| || || ||| || |
Sbjct 1285 ATGAGTTTGACCAATTGTTCCATGACGTTTC-CATGTCTTTGGATATGGAACCTATTGAT 1343
Query 1252 CAGGGAACTTCTACAAATCTGTCTTCTCTGAGTAATTTTACTAA-TAACACATCAGACCA 1310
|||||||||||| |||||||||||||||||||| ||| | |||| | |||||||||||||
Sbjct 1344 CAGGGAACTTCTGCAAATCTGTCTTCTCTGAGTGATTCTGCTAACT-ACACATCAGACCA 1402
Query 1311 GAGACAGCAA-TACCTTAATCAACAGTTTCAGTACCAGGC-CCCTGAGAACCAGCTGAAT 1368
| ||||||| | |||| |||||||||| ||| ||||| | ||| ||||||||||||||
Sbjct 1403 AAAACAGCAACT-CCTTTATCAACAGTTCCAGGACCAGACTCCC-GAGAACCAGCTGAAC 1460
Query 1369 AACTTCATGTATCCTAGTACCACTATTAATCAGTTCACTGA-CAATATGTGGTTTAAAGA 1427
||| ||||| |||||||||| ||| | ||||| ||||| | | |||| ||||| | ||
Sbjct 1461 AACATCATGGATCCTAGTACAACTCTCAATCAAATCACT-AGCGATATTTGGTTCGAGGA 1519
Query 1428 TGATCAGGCTGCTCTCTTTGTTCAACCACAAT-CTTCTTCTGGAGCATTCGCTTCACAGT 1486
||||||||| ||| |||| ||||| ||||| ||| |||||||||||| ||||||| |
Sbjct 1520 TGATCAGGCCATTCTATTTGATCAACAACAATCCTT-TTCTGGAGCATTTGCTTCACCCT 1578
Query 1487 CAACAGGTGTGATGCCTGAGTCTATGAATCCCACTATGAGTGTAAATCCCCAAGACAAGG 1546
|| |||||||||||||||| || | ||||| ||||||||||| ||| |||||| | | |
Sbjct 1579 CATCAGGTGTGATGCCTGATTCCACCAATCCTACTATGAGTGTGAATGCCCAAGGCCATG 1638
Query 1547 AAGGCCAAAATGGTGGTGGAACAAGGAGCCAGTTCTCATCAGCTCTGTGGGAATTATTGG 1606
|| |||||||||||||||||||| |||||||||||||| ||| |||||| |||| |||
Sbjct 1639 AAATCCAAAATGGTGGTGGAACAACAAGCCAGTTCTCATCGGCTTTGTGGGCATTAATGG 1698
Query 1607 AATCAATACCATCAACACCAGCCTCTGCCTGTGAGGGTCCTCTTAACCAG-ACCTTTGTG 1665
| |||||||| ||||| ||||||||||| ||||||||||| ||||||| | ||||||||
Sbjct 1699 ACTCAATACCTTCAACGCCAGCCTCTGCGTGTGAGGGTCCCCTTAACC-GAACCTTTGTA 1757
Query 1666 CGTATGTCTAGCTTCAGCCGGATCAGGTTCAATGGAACGTC-AGT-G---GCTAGTAGAA 1720
|||||||||||||||||||| || ||||||||||||| | | | | | || ||| ||
Sbjct 1758 CGTATGTCTAGCTTCAGCCGTATGAGGTTCAATGGAAAGGCTAATGGAACGCCAGT-GAG 1816
Query 1721 AAGTCACTTTAGCAAAGAAGCGTATCAGTAACAGAGGTTTTCTTCTGTTATCAATTATGG 1780
| | || ||||||||||| |||| || ||||||||||||||||| |||||||| |||
Sbjct 1817 TACT-ACCATAGCAAAGAAGGGTATTAGAAACAGAGGTTTTCTTCTATTATCAATCGTGG 1875
Query 1781 GTGCTTTGTGTGCCATCTTCTGGGTGTTCATAGCCACAGTTGGAGT 1826
|||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1876 GTGCTTTGTGTGCCATCTTCTGGGTGTTGGTAGCCACAGTTCGAGT 1921
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98292667110
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5