BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473605 Length=1638 Score E Sequences producing significant alignments: (Bits) Value AT1G34580.1 | Symbols: | Major facilitator superfamily protein... 2418 0.0 > AT1G34580.1 | Symbols: | Major facilitator superfamily protein | chr1:12660551-12663870 FORWARD LENGTH=1918 Length=1918 Score = 2418 bits (1309), Expect = 0.0 Identities = 1541/1652 (93%), Gaps = 19/1652 (1%) Strand=Plus/Plus Query 1 AATGTATTATCTTTGTTCATTTGGTTTT---ACGATTAAAAAAC-----AACAACAATTC 52 |||||||| ||||||||||||||||||| || | ||||||| || |||| ||| Sbjct 1 AATGTATTCTCTTTGTTCATTTGGTTTTACAACCAAAAAAAAACAAAAAAAAAACACTTC 60 Query 53 ATTTGTAAGACATAAGCAAAATGG-CTATCGGAGGATTGGCTCTTGATGTCTCCGGCGCC 111 || |||||||||||||||||||| | | |||||||||||||||||||||||| ||||| Sbjct 61 ATGCGTAAGACATAAGCAAAATGGCCGGT-GGAGGATTGGCTCTTGATGTCTCCAGCGCC 119 Query 112 GGAAACATAGATGCCAAGATCACAACCGCAGTTGTCATGAGTTGCATTGTGGCTGCCTCA 171 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 120 GGAAACATTGATGCCAAGATCACAGCCGCAGTTGTCATGAGTTGCATTGTGGCTGCCTCA 179 Query 172 TGTGGTCTCATTTTTGGCTACGATATCGGAATATCAGGGGGTGTGACAACAATGAAGCCG 231 |||||||||||||||||||| || |||||||| |||||||||||||| || ||||||||| Sbjct 180 TGTGGTCTCATTTTTGGCTATGACATCGGAATCTCAGGGGGTGTGACGACTATGAAGCCG 239 Query 232 TTTCTTGAGAAATTCTTTCCATCGGTTCTTAAAAAAGCTTCGGAAGCTAAGACGAATGTG 291 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 TTTCTTGAGAAATTCTTTCCATCGGTTCTTAAAAAAGCTTCGGAAGCTAAGACGAATGTC 299 Query 292 TACTGCGTCTACGACAGCCAACTTCTTACGGCCTTCACATCTAGCCTTTATGTTGCCGGC 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TACTGCGTCTACGACAGCCAACTTCTTACGGCCTTCACATCTAGCCTTTATGTTGCCGGC 359 Query 352 TTAGTCGCTTCCTTAGTGGCTAGCCGTCTCACAGCGGCTTATGGTCGCCGCACCACCATG 411 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 360 TTAGTAGCTTCCTTAGTGGCTAGCCGTCTCACAGCGGCTTATGGTCGCCGAACCACCATG 419 Query 412 ATCCTTGGCGGTTTCACTTTCCTCTTTGGTGCCCTGATCAATGGCTTAGCTGCCAACATC 471 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 420 ATCCTTGGCGGTTTCACTTTCCTCTTTGGTGCTCTGATCAATGGCTTAGCTGCTAACATC 479 Query 472 GCCATGCTTATCTCCGGTCGGATTTTGTTAGGATTTGGTGTTGGCTTCACAAACCAGGCA 531 |||||||| |||||||||||||||||| ||||||||||||| || ||||| |||||||| Sbjct 480 GCCATGCTCATCTCCGGTCGGATTTTGCTAGGATTTGGTGTCGGTTTCACCAACCAGGCG 539 Query 532 GCTCCGGTGTATTTATCGGAAGTAGCACCACCGCGATGGCGTGGAGCATTTAAC-TCCGG 590 |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| || || Sbjct 540 GCTCCGGTATATCTATCGGAAGTAGCACCACCGCGATGGCGTGGAGCATTCAACATC-GG 598 Query 591 CTTT-CAATTCTTCATCGGTGTCGGAGTAGTAGCAGCCAATCTAATAAACTACGGTACGG 649 |||| || | ||||||| || | |||||||||||||||||||||||||| |||||||| | Sbjct 599 CTTTTCA-TGCTTCATCAGTATGGGAGTAGTAGCAGCCAATCTAATAAATTACGGTACCG 657 Query 650 ACAGCCACCGTAACGGCTGGCGTATCTCTTTAGGTCTAGCTGCTGTACCAGCCGCGATCA 709 | || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 658 ATAGTCACCGTAACGGCTGGCGTATCTCGCTAGGTCTAGCTGCTGTACCAGCCGCGATCA 717 Query 710 TGACCGTGGGATGTCTATTCATTTCCGATACACCTTCTAGCCTCTTGGCGCGTGGGAAAC 769 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 718 TGACCGTGGGATGTCTATTCATTTCCGACACACCTTCTAGCCTCTTGGCGCGTGGGAAAC 777 Query 770 ACGATCAAGCTCACACGTCGCTGCTTAAGCTACGTGGCGTCGAAAACATAGCTGACGTGG 829 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 ACGATGAAGCTCACACGTCGCTGCTTAAGCTACGTGGCGTCGAAAACATAGCTGACGTGG 837 Query 830 AAATTGAGCTAGCAGAGTTG-TCTAGATCAAGCCAACTAGCCATTGAGGCTAGAGCCGAA 888 ||| ||||||||||||||| | ||| |||||||| |||||||||||||||||||||||| Sbjct 838 AAACCGAGCTAGCAGAGTTGGT-TAGGTCAAGCCAGCTAGCCATTGAGGCTAGAGCCGAA 896 Query 889 CCGTTTATGAAGACGATATTGGAGAGACGGTATAGGCCTCATCTTGTGGTTGCTGTGGCG 948 | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 897 CTGTTTATGAAGACGATATTGCAGAGACGGTATAGGCCTCATCTTGTGGTTGCTGTGGTG 956 Query 949 ATACCATGTTTTCAACAGTTAACCGGGATCACGGTTAATGCGTTCTATGCGCCGGTTCTG 1008 ||||||||||||||||||||||| || || ||||| || ||||||||||||||||||||| Sbjct 957 ATACCATGTTTTCAACAGTTAACTGGAATAACGGTGAACGCGTTCTATGCGCCGGTTCTG 1016 Query 1009 TTTCGATCGGTTGGGTTTGGTTCTGGTCCGGCTCTTATTGCGACGTTGATACTCGGGTTG 1068 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1017 TTTCGATCGGTTGGGTTTGGTTCTGGTCCGGCTCTTATTGCGACGTTCATACTCGGGTTT 1076 Query 1069 GTTAATCTTGGTTCGCTTCTTGTCTCAACCATGGTTATTGACCGGTTTGGTAGACGGTTT 1128 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 1077 GTTAATCTTGGTTCGCTTCTTCTCTCAACAATGGTTATTGACCGGTTTGGTAGACGGTTT 1136 Query 1129 TTGTTCATTGCTGGTGGTATTCAGATGTTTCTCTGCCAGATTGCAGTGGCTGTGTTACTA 1188 |||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||||| Sbjct 1137 TTGTTCATTGCTGGCGGTATTCTGATGCTTCTCTGTCAGATTGCAGTGGCTGTGTTACTA 1196 Query 1189 GCAGTGACAGTGGGAGCCAACGGGGACGGAGAGATGAAGAAGGGTTACGCCGTGACGGTG 1248 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1197 GCTGTGACAGTGGGAGCCACCGGGGACGGAGAGATGAAGAAGGGTTACGCCGTGACGGTG 1256 Query 1249 GTGGTGTTACTTTGCATATACTCGGCTGGGTTTGGATGGTCGTGGGGGCCATTGAGCTGG 1308 ||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| Sbjct 1257 GTGGTGTTACTTTGCATATACGCAGCTGGGTTTGGATGGTCGTGGGGGCCATTAAGCTGG 1316 Query 1309 CTTGTCCCGAGTGAGATATTCCCACTCAAGATGCGACCGGCTGGTCAAAGCTTAAGCGTC 1368 |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct 1317 CTTGTCCCAAGTGAGATATTCCCACTCAAGATACGACCAGCTGGTCAGAGCTTAAGCGTT 1376 Query 1369 GCCGTGAACTTCGCCGCAACGTTCGCTCTCTCTCAGACGTTCTTAGCAACGCTCTGCGAT 1428 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 1377 GCCGTGAACTTCGCCGCAACGTTTGCTCTCTCTCAAACGTTCTTAGCAACGCTCTGCGAT 1436 Query 1429 TTCAAGTACGGTGCGTTCTTGTTTTATGGCGGTTGGATCTTTAGTATGACGGTGTTCGTC 1488 |||||||||||||| ||||||||||| |||||||||||||||| |||||| | |||||| Sbjct 1437 TTCAAGTACGGTGCTTTCTTGTTTTACGGCGGTTGGATCTTTACAATGACGATATTCGTC 1496 Query 1489 ATCATGTTCTTGCCGGAGACCAAAGGGATCCCTGTGGATTCTATGTATCAAGTTTGGGAG 1548 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1497 ATCATGTTCTTGCCCGAGACCAAAGGGATACCTGTGGATTCTATGTATCAAGTTTGGGAG 1556 Query 1549 AAGCATTGGTATTGGCAACGGTTCACTAAACGGACGTCAA-TATGAAAGATACAATATTG 1607 ||||||||||||||||||||||| ||||||| |||||||| | | |||||| |||||||| Sbjct 1557 AAGCATTGGTATTGGCAACGGTTTACTAAACCGACGTCAACT-TAAAAGATGCAATATTG 1615 Query 1608 CTATGGTTTA-CATTTTCCATGGATTATGTTT 1638 | |||| || ||||||| ||||||||||||| Sbjct 1616 CAATGGGTTCGCATTTTCAATGGATTATGTTT 1647 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80923278540 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5