BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473629 Length=1779 Score E Sequences producing significant alignments: (Bits) Value AT1G31470.1 | Symbols: NFD4 | Major facilitator superfamily pro... 2712 0.0 AT1G31460.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 699 0.0 > AT1G31470.1 | Symbols: NFD4 | Major facilitator superfamily protein | chr1:11262918-11264963 REVERSE LENGTH=1787 Length=1787 Score = 2712 bits (1468), Expect = 0.0 Identities = 1681/1785 (94%), Gaps = 9/1785 (1%) Strand=Plus/Plus Query 1 ATCATCTTCCTTTGTATATGAGACCTCGTATCAGAGATGCATCTGAAAAACTCCGACCTA 60 ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct 3 ATCATCTTCCTTTGTATATGAGACCTCGTATCAGAGATGTTTCAGATAAACTCCGACCTA 62 Query 61 ATCGAGCCTCCTTCGACGAC---GAAGGAAAGTTTCACCGGAAACA-CATTCCGCCTCTC 116 | |||||||||||||||||| ||| |||||||||||||||||| | ||||||||||| Sbjct 63 ACCGAGCCTCCTTCGACGACGGAGAAACAAAGTTTCACCGGAAACATC-TTCCGCCTCTC 121 Query 117 AGGACCATGTTCGGTCGATGGCGGAAATGGACTGTTCTTGTGGCAGCGATCTGGATCCAA 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 AGGACCATGTTCGGTCGATGGCGGAAATGGACTGTTCTTGTGGCAGCGATCTGGATCCAA 181 Query 177 GCATCCACGGGAACCAACTTCGATTTCTCTGCTTACTCTTCCCATCTCAAATCAGTACTC 236 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 182 GCATCGACGGGAACCAACTTCGATTTCTCAGCTTACTCTTCCCATCTCAAATCAGTTCTC 241 Query 237 GGAATATCTCAGGTGAGGTTGAATTACCTCGCGGTGGCTTCTGATTTGGGGAAAGCGTTT 296 ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 242 GGAATTTCTCAGGTGAGGTTAAATTACCTCGCCGTGGCTTCTGATTTGGGGAAAGCGTTT 301 Query 297 GGATGGTCTTCGGGGATTGCTTTAGGTTATTTCCCTCTCTCCGTCGTTCTTTTCGCTGCG 356 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 GGATGGTCGTCTGGGATTGCTTTAGGTTATTTCCCTCTCTCCGTCGTTCTTTTCGCTGCG 361 Query 357 GCGGCTATGGGATTTGTTGGTTATGGTGTTCAGTGGCTAGTCATCACCAACATCATCACT 416 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 362 GCGGCTATGGGATTTGTTGGTTACGGTGTTCAGTGGCTAGTCATCACCAACATCATCACT 421 Query 417 TTGCATTATTCTCTGGTGTTTCTGTGTTGCTTGTTGGCTGGATTAAGCATCTGTTGGTTC 476 |||| |||||||||||||||||| || |||||||| ||||||||||| |||||||||||| Sbjct 422 TTGCCTTATTCTCTGGTGTTTCTCTGCTGCTTGTTAGCTGGATTAAGTATCTGTTGGTTC 481 Query 477 AACACAGCATGTTTTATCCTCTGCATTCGTCATTTCCCGAACAATCGTGCTCTCGCCTTA 536 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 482 AACACAGCATGTTTCATCCTCTGCATTCGTCATTTCCCGAACAATCGTGCTCTCGCCTTA 541 Query 537 TCTTTAACGGTAAGCTTCAATGGAATTAGTGCAGCATTGTACTCCCTTGCTTTCAATGCA 596 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 542 TCTTTAACGGTAAGCTTCAATGGAATCAGTGCAGCATTGTACTCCCTTGCTTTCAATGCA 601 Query 597 ATTAACCCGTCGTCTTCGAATCTATACCTTCTGCTGAACTCTCTGGTTCCCCTTGTTGTC 656 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 602 ATTAACCCGTCGTCGTCCAATCTATACCTTCTGCTGAACTCTCTGGTTCCCCTTGTTGTT 661 Query 657 TCGTTTGCTGCTCTTTATCCAGTTCTTACTAAACCTTCTATAGATCCTACACCAGACAAT 716 || |||||||||||||| ||||||||||||||||| ||| ||||| |||| || ||| || Sbjct 662 TCCTTTGCTGCTCTTTACCCAGTTCTTACTAAACCGTCTCTAGATACTACTCCGGACTAT 721 Query 717 GAATCCCGGC-GAAATGACTCCCATGTGTTTACCATTTTGAATGTCTTAGCCGTTACGAC 775 || |||| || || ||||||||||||||||||||||||||||||| ||||| || | || Sbjct 722 GATTCCC-GCAGACATGACTCCCATGTGTTTACCATTTTGAATGTTTTAGCTGTCATTAC 780 Query 776 AAGTTTTCACCTTCTTCTATCCAGTTCCAGTACTTCATCAGCTCGTTTGAATTTCATTGG 835 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 781 GAGTTTCCACCTTCTCCTATCTAGTTCCAGTACTTCATCAGCGCGTTTGAATTTCATTGG 840 Query 836 AGCTATCGTCCTTCTGGTTTTCCCCTTGTGTGCTCCTCTTCTCGTCTATGCTCGAGATTA 895 |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 841 AGCTGTCGTCCTTCTGGTTTTCCCCTTGTGTGCTCCTCTTCTCGTTTATGCTCGGGATTA 900 Query 896 CTTTCTTCCTGTTATTAATGCTCGTTTAAACCATGAAAGCTCTGGCTATGTTATGCTTAA 955 ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CTTTCTTCCGGTCATTAACGCTCGTTTAAACCATGAAAGCTCTGGCTATGTTATGCTTAA 960 Query 956 CATAGATGAGCTCAAGAGCCAAAAAGCGTCTGTTTCCAGCAAAATTGGGTATGAACAAT- 1014 ||||||||||||||||| ||||||| |||| ||||||||||||| |||||||||| || Sbjct 961 CATAGATGAGCTCAAGAACCAAAAAACGTCCGTTTCCAGCAAAACCGGGTATGAAC-ATA 1019 Query 1015 TGGGGACTGCTAAGGAAGGGAACATAGTGATGCTCGGTGATGAACACTCCTTTCAATTGC 1074 |||||||||||||||||||||||| ||||| ||||||||||||||| || |||| ||||| Sbjct 1020 TGGGGACTGCTAAGGAAGGGAACACAGTGAGGCTCGGTGATGAACATTCGTTTCGATTGC 1079 Query 1075 TCATAAGTAGATTGGAATTTTGGTTATACTACATTGCGTATTTCTGTGGTGGCACTATTG 1134 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1080 TCATAAGTAGATTGGAGTTTTGGTTATACTACATTGCGTATTTCTGTGGTGGCACAATTG 1139 Query 1135 GCCTTGTGTATAGCAACAATTTGGGACAGATTGCTCAGTCTTTAGGACAAAACTCTACAA 1194 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 1140 GCCTTGTTTACAGCAACAATTTGGGACAGATTGCTCAGTCTTTGGGACAAAACTCTACTA 1199 Query 1195 CCCTCGTCACAATCTACTCTTCATTCTCCTTCTTCGGTCGATTGCTCTCTGCCGCACCAG 1254 | || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1200 CACTAGTCACAATCTACTCTTCATTCTCCTTCTTCGGTAGATTGCTCTCTGCCGCACCAG 1259 Query 1255 ATTTTATGCACAAGAGATTTCGTTTGACAAGAACCGGCTGGTTTGCAATTGCACTCTTAC 1314 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 1260 ATTTTATGCACAAGAGATTTCGTTTAACAAGAACCGGCTGGTTTGCAATCGCACTCTTAC 1319 Query 1315 CAACTCCAATCGCTTTCTTTTTACTAGCGATATCATCCTCACAACAAATAGCATTGCAAA 1374 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct 1320 CAACTCCAATCGCTTTCTTTTTACTAGCGGTATCATCCTCACAACAAACAGCATTGCAGA 1379 Query 1375 CGGCAACCGCCTTAATCGGTCTGAGCTCAGGTTTCATATTTGCAGCTGCAGTCTCCATAA 1434 | |||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct 1380 CCGCAACCGCATTAATCGGTCTGAGTTCAGGTTTCATATTCGCAGCCGCAGTCTCCATAA 1439 Query 1435 CATCTGATCTCTTTGGACCCAATAGCGTAGGTGTTAACCACAACATTCTCATCACAAACA 1494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 CATCTGATCTCTTTGGACCCAATAGCGTAGGTGTTAACCACAACATTCTCATCACAAACA 1499 Query 1495 TACCAATCGGCTCACTCTTATACGGTTACATCGCTGCCTCTATTTACGAAGCCAACGCAA 1554 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1500 TACCAATCGGCTCACTCTTATACGGTTACATCGCTGCCTCCATTTACGAAGCCAACGCAA 1559 Query 1555 TCCCCGAGATAACACCAATCGTGTCTGACTCAATCGTTTGCATCGGAAGAGATTGCTACT 1614 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1560 GCCCCGATATAACACCAATAGTGTCTGACTCAATCGTTTGCATCGGAAGAGATTGCTACT 1619 Query 1615 TCAAAACGTTTGTGTTTTGGGGTTTCTTATCAATCGTCGGCGTCATCTCAAGTCTGTTAC 1674 |||||||||||||||||||||||| ||| || ||| |||||||| |||||||||||| || Sbjct 1620 TCAAAACGTTTGTGTTTTGGGGTTGCTTGTCTATCCTCGGCGTCGTCTCAAGTCTGTCAC 1679 Query 1675 TGTACATAAGAACCAAACCGGTTTATCACCGGCTTGAACAAGACCAGGTTTCATTAACCT 1734 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 1680 TGTACATACGAACCAAACCGGTTTATCACCGGCTTGAACAAGACAAGGTTTCATTAACAT 1739 Query 1735 CATCGTACAAGGATCTTGATCCATTGTAAATCAAATTTGTAACAC 1779 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1740 CATCGTACAAGGATCTTGATCCATTGTAAATCAAATCTGTAACAC 1784 > AT1G31460.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). | chr1:11261541-11263364 REVERSE LENGTH=1824 Length=1824 Score = 699 bits (378), Expect = 0.0 Identities = 422/444 (95%), Gaps = 0/444 (0%) Strand=Plus/Plus Query 1336 TACTAGCGATATCATCCTCACAACAAATAGCATTGCAAACGGCAACCGCCTTAATCGGTC 1395 |||||||| |||||||||||||||||| ||||||||| || |||||||| |||||||||| Sbjct 1 TACTAGCGGTATCATCCTCACAACAAACAGCATTGCAGACCGCAACCGCATTAATCGGTC 60 Query 1396 TGAGCTCAGGTTTCATATTTGCAGCTGCAGTCTCCATAACATCTGATCTCTTTGGACCCA 1455 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 61 TGAGTTCAGGTTTCATATTCGCAGCCGCAGTCTCCATAACATCTGATCTCTTTGGACCCA 120 Query 1456 ATAGCGTAGGTGTTAACCACAACATTCTCATCACAAACATACCAATCGGCTCACTCTTAT 1515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATAGCGTAGGTGTTAACCACAACATTCTCATCACAAACATACCAATCGGCTCACTCTTAT 180 Query 1516 ACGGTTACATCGCTGCCTCTATTTACGAAGCCAACGCAATCCCCGAGATAACACCAATCG 1575 ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| | Sbjct 181 ACGGTTACATCGCTGCCTCCATTTACGAAGCCAACGCAAGCCCCGATATAACACCAATAG 240 Query 1576 TGTCTGACTCAATCGTTTGCATCGGAAGAGATTGCTACTTCAAAACGTTTGTGTTTTGGG 1635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TGTCTGACTCAATCGTTTGCATCGGAAGAGATTGCTACTTCAAAACGTTTGTGTTTTGGG 300 Query 1636 GTTTCTTATCAATCGTCGGCGTCATCTCAAGTCTGTTACTGTACATAAGAACCAAACCGG 1695 ||| ||| || ||| |||||||| |||||||||||| |||||||||| |||||||||||| Sbjct 301 GTTGCTTGTCTATCCTCGGCGTCGTCTCAAGTCTGTCACTGTACATACGAACCAAACCGG 360 Query 1696 TTTATCACCGGCTTGAACAAGACCAGGTTTCATTAACCTCATCGTACAAGGATCTTGATC 1755 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 361 TTTATCACCGGCTTGAACAAGACAAGGTTTCATTAACATCATCGTACAAGGATCTTGATC 420 Query 1756 CATTGTAAATCAAATTTGTAACAC 1779 ||||||||||||||| |||||||| Sbjct 421 CATTGTAAATCAAATCTGTAACAC 444 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88001555385 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5