BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473657
Length=935
Score E
Sequences producing significant alignments: (Bits) Value
AT1G35140.1 | Symbols: PHI-1, EXL7 | Phosphate-responsive 1 fam... 1362 0.0
> AT1G35140.1 | Symbols: PHI-1, EXL7 | Phosphate-responsive 1 family
protein | chr1:12851997-12853128 FORWARD LENGTH=1132
Length=1132
Score = 1362 bits (737), Expect = 0.0
Identities = 873/939 (93%), Gaps = 8/939 (1%)
Strand=Plus/Plus
Query 1 AAATGGCGACTTTTGTGATGGGTTACTTCTTATTGTTCGCTGTTGCGTTT-GTGTGTTTG 59
||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||
Sbjct 91 AAATGGCTTCTTTTGTGATGGGATACTTCTTATTGTTCGCTGTTGC-TTTCATGTGTTTG 149
Query 60 GATGCGAGGACGGACAAAACGCAAGATTATACGTCGTTTCAGTACCATAAAGGAGCTCTC 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 GATGCGAGAACGGACAAAACGCAAGATTATACGTCGTTTCAGTACCATAAAGGAGCTCTC 209
Query 120 CTCACCGGAGACGTCTCCATCAACCTGATATGGTACGGTAAGTTTAAACCGTCGCAGCGT 179
|||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 210 CTCACCGGAGACGTTTCCATCAACCTAATCTGGTACGGTAAGTTTAAACCGTCGCAGCGT 269
Query 180 GCAATCGTAACCGACTTCGTTGCTTCCCTCTCGTCTTCCCGGAGATCGACCGTTGCTCAA 239
|||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 270 GCAATCGTAACCGATTTCGTTGCTTCCCTCTCGTCTTCCCGGAGATCGACCATGGCTCAA 329
Query 240 AA-CCCATCGGTTGCCACGTGGTGGAAGACGGTGGAGAAGTATTACCACGTCAGCAAGAC 298
|| ||| || || ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 330 AATCCC-TCAGTCGCCACGTGGTGGAAGACGGTGGAGAAGTATTACCAATTCCGCAAGAT 388
Query 299 GACGACGACACGTGGACTCACTCTCTCACTCGGAGAACAGATTCTCGATGAAGGATACTC 358
||| |||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||
Sbjct 389 GACCACGACACGTGGACTCAGTCTCTCCCTCGGAGAACAGATCCTCGACCAAGGATACTC 448
Query 359 AATGGGAAAATCTTTAACAGAGAGAAACCTCAAA-ACCTTGGCCGCTAAAGGCCGTCAAA 417
||||||||||||||||||||||| |||||||||| | ||||||||| ||||| | ||||
Sbjct 449 AATGGGAAAATCTTTAACAGAGAAAAACCTCAAAGA-CTTGGCCGCAAAAGGTGGCCAAA 507
Query 418 GCTATGCGGTTAACGTGGTGTTGACCTCAGCTGACGTGTCGGTCCAAGGCTTTTGCATGA 477
|||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 508 GCTACGCGGTTAACGTCGTGTTGACCTCAGCTGACGTGACGGTCCAAGGCTTTTGCATGA 567
Query 478 ACCGATGCGGGTCACACGGGTCAGGTTCCGGGTCAGGCAAGAAAGGATCAAGATTCGCTT 537
|| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 568 ACAGATGCGGGTCACACGGGACTGGTTCCGGGTCAGGCAAGAAAGGATCAAGATTCGCTT 627
Query 538 ACATCTGGGTCGGGAACTCAGAGAA-ACAATGTCCAGGACAATGCGCGTGGCCATTCCAC 596
|||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 628 ACATCTGGGTTGGAAACTCAGA-AACACAATGTCCAGGACAATGCGCGTGGCCATTCCAC 686
Query 597 GCGCCTGTTTATGGACCGCAAAGCCCACCACTTGTTGCACCAAACAACGACGTTGGTTTA 656
||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 687 GCGCCGGTTTACGGACCGCAAAGCCCACCACTAGTGGCACCAAACAACGACGTTGGTTTA 746
Query 657 GATGGGATGGTCATTAACTTGGCGAGTCTTTTGGCTGGGACCGCAACGAACCCATTCGGA 716
|| |||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||
Sbjct 747 GACGGGATGGTGATTAACTTGGCGAGTCTCATGGCTGCGACGGCAACGAACCCGTTCGGA 806
Query 717 GATGGGTATTACCAAGGGCCTAAAACGGCACCGCTTGAAGCTGGATCGGCTTGTACTGGA 776
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 807 GATGGATATTACCAAGGGCCTAAAACGGCACCGCTTGAGGCTGGATCGGCTTGTACTGGA 866
Query 777 GTCTATGGGAAAGGTTCGTATCCTGGTTATGCTGGAGAGTTACTTGTGGATGCAACGACC 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 GTCTATGGGAAAGGTTCGTATCCTGGTTATGCTGGAGAGTTACTTGTGGATGCAACGACC 926
Query 837 GGTGGGAGTTATAACGCTAAGGGATTGAATGGGAGGAAATATTTGCTACCGGCTTTGTTT 896
|||||||||||||||| ||||||| |||||||||| ||||||||| ||||||||||||||
Sbjct 927 GGTGGGAGTTATAACGTTAAGGGACTGAATGGGAGAAAATATTTGTTACCGGCTTTGTTT 986
Query 897 GACCCCAAAACATCTACTTGCTCGACTATGTTTTGAATA 935
||||| |||||| | ||||||||||| |||||||||||
Sbjct 987 GACCCTAAAACAGATTCTTGCTCGACTCTGTTTTGAATA 1025
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45713073770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5