BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473708
Length=1439
Score E
Sequences producing significant alignments: (Bits) Value
AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydroge... 2073 0.0
AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate d... 2023 0.0
AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydroge... 1098 0.0
> AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydrogenase
1 | chr5:4576202-4578402 FORWARD LENGTH=1539
Length=1539
Score = 2073 bits (1122), Expect = 0.0
Identities = 1357/1464 (93%), Gaps = 42/1464 (3%)
Strand=Plus/Plus
Query 1 ATGGCGGCGTTTTTGCAAACTAACATGACTCTGGATTCGATCAAGATCGTCCC-GGGAAG 59
|||||||||||||||||||| ||||| | |||| || |||||||||||||||| |||||
Sbjct 19 ATGGCGGCGTTTTTGCAAACGAACATCAGTCTGAATGCGATCAAGATCGTCCCGGGGAA- 77
Query 60 ATACAGTTCTCTCACCG------A---TCGTGCGCCGTATCGAATTAGGTGCGCCGCCGC 110
||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 78 ATACAGTTCTCTCACCGATCATCAGTTTCGTGCGCCGTATCGAATTAGGTGCGCCGCCGC 137
Query 111 TTCACC-GGTGAAAAAACGGTATAACATCGCTCTGCTTCCCGGCGATGGTATCGGTCCCG 169
|||||| || ||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 138 TTCACCTGG-GAAAAAACGGTATAACATCGCTCTGCTTCCCGGAGACGGTATCGGTCCAG 196
Query 170 AAGTTATATCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGGTTTCTCCAAGGACTGGAGT 229
||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct 197 AAGTTATCTCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGATCTCTCGAAGGACTGGAGT 256
Query 230 TTGATTTCCAGGAGATGCCTTTCGGAGGAGCAGCCTTGGATTTGGTCGGAGTTCC-TCTG 288
|||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| | ||
Sbjct 257 TTGATTTCAAGGAGATGCCTGTCGGAGGAGCAGCCTTGGATTTGGTTGGAGTTCCAT-TG 315
Query 289 CCGGAGGAAACTTCCACGGCTGCAAAAC-AGTCTGATGCCGTTCTTCTTGGAGCTATCGG 347
||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||| ||
Sbjct 316 CCGGAGGAAACTTTCACGGCTGCAAAACTA-TCTGATGCCATTCTTCTTGGAGCTATTGG 374
Query 348 AGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGGTCTCTTACACCT 407
||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct 375 AGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGCTCTGTTTTACCT 434
Query 408 TCGAAGAGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCACAGCTAGT 467
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 TAGAAGAGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCACAGCTAGT 494
Query 468 TGATGCTTCCACACTGAAGAAAGAAGTAGCACAAGGTGTTGATATGATGATTGTAAGGGA 527
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 495 TGATGCTTCCACACTGAAGAAAGAAGTAGCAGAAGGTGTTGATATGATGATTGTTAGGGA 554
Query 528 GCTCATTGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACCATCAATGAAAATGGCGA 587
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 555 GCTCACAGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACGATCAATGAAAATGGCGA 614
Query 588 AGAAGTCGGTGTTAATACAGAGATCTACGCTGCTCACGAGATTGACAGAATTGCTCGTGT 647
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 AGAAGTCGGCGTTAGTACAGAGATCTACGCTGCTCACGAGATTGACAGAATTGCTCGTGT 674
Query 648 TGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCTGTCGATAAAGCCAATGT 707
|||||||||||||||||||||||||||||||| || |||||||| || |||||||||||
Sbjct 675 AGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAACTTTGTTCTGTTGACAAAGCCAATGT 734
Query 708 GTTGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGCCTCTGAATATCCAGA 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GTTGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGCCTCTGAATATCCAGA 794
Query 768 TGTTGAACTATCGCATATGTATGTCGATAATGCTGCAATGCAGCTTATCCGTTACCCGAA 827
|||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 795 TGTTGAACTATCACATATGTATGTCGATAATGCTGCAATGCAGCTTATTCGTGACCCGAA 854
Query 828 ACAGTTTGACACAATCGTCACCAATAACATTTTTGGTGATATATTGTCTGATGAAGCTTC 887
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 855 ACAGTTTGACACAATCGTTACCAATAACATTTTTGGTGATATATTGTCTGATGAAGCTTC 914
Query 888 AATGATCACTGGAAGCATTGGGATGCTTCCATCTGCAAGTCTTGGTGAATCGGGACCTGG 947
||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct 915 AATGATCACTGGAAGCATTGGAATGCTTCCATCTGCTAGTCTCGGTGAATCGGGACCTGG 974
Query 948 ACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAAGACAAGGCAAACCC 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 ACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAAGACAAGGCAAACCC 1034
Query 1008 ATTGGCCACCATTCTCAGTGCGGCGATGCTTCTCAAGTATGGACTTGGAGAAGAAACGGC 1067
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||
Sbjct 1035 ATTGGCCACCATTCTCAGCGCGGCGATGCTTCTGAAGTATGGACTTGGAGAAGAAAAGGC 1094
Query 1068 TGCAAAGAGGATTGAAGACGCGGTCTTGGATGCTCTGAACAAAGGTTTCAGAACCGGAGA 1127
||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||
Sbjct 1095 TGCAAAGAGGATTGAAGACGCTGTCGTGGATGCTCTGAACAAAGGGTTCAGAACCGGAGA 1154
Query 1128 CATCTACTCCCCCGGAAATAAACTGGTGGGATGCAAGGAAATGGGTGAGGAGGTTCTCAA 1187
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 CATCTACTCCCCTGGAAATAAACTGGTGGGATGCAAGGAAATGGGTGAGGAGGTTCTCAA 1214
Query 1188 ATCACTGGACTCCAAAGTTCCAGCTACTGTTTAAGTTTACTGATGATTT-AA--A----A 1240
|||| |||| ||||||||||||||||||||||||||||| ||||||||| || | |
Sbjct 1215 ATCAGTGGAATCCAAAGTTCCAGCTACTGTTTAAGTTTATTGATGATTTGAAGCACTTGA 1274
Query 1241 AA--GT--GTGTAGCCCTTGGTTTTACGGTTACTTGTATGCTAATCCATGTATTAGAAAC 1296
|| || ||||||| |||||||||||||| |||| |||||||||||||| | | |
Sbjct 1275 AAAAGTTTGTGTAGCACTTGGTTTTACGGTCACTTATATGCTAATCCATGCA--ACA--- 1329
Query 1297 TGTAGTATTCTAGCTTTTATAATAAATAAAATATTTGGGATCGAATTCTGCAATTTAAAG 1356
| | ||| | ||||||||||||||||| ||||||||||||| |||||||||| ||||
Sbjct 1330 T-T-GTA--C---CTTTTATAATAAATAAATTATTTGGGATCGA-TTCTGCAATTCAAAG 1381
Query 1357 ACAAGATTCTCCAAGAACATTTGACAAGTCTCCTGCCTC-ACTTACCCTGTTCTTGAAGA 1415
|||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||
Sbjct 1382 ACAAGATTCTCCAAAAACATTTGACAGGTCTCCTGCCTTTACTTACCTTGTTCTTGAAGA 1441
Query 1416 TTGAGAAGTTCTCTCCAACTACAA 1439
||||||| |||||| |||||||||
Sbjct 1442 TTGAGAATTTCTCTTCAACTACAA 1465
> AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate
dehydrogenase 3 | chr1:11142714-11144633 REVERSE LENGTH=1360
Length=1360
Score = 2023 bits (1095), Expect = 0.0
Identities = 1292/1379 (94%), Gaps = 46/1379 (3%)
Strand=Plus/Plus
Query 1 ATGGCGGCGTTTTTGCAAACTAACATGACTCTGGATTCGATCAAGATCGTCCCGGGAAGA 60
|||||||||||||||||||||||||| | | | || | ||||| | |||||||||
Sbjct 17 ATGGCGGCGTTTTTGCAAACTAACAT--C-C--G--TC--TGGAGATCATACCGGGAAGA 67
Query 61 TACAGTTCTCTCACCG------A---TCGTGCGCCGTATCGAATTAGGTGCGCCGCCGCT 111
|||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 68 TACAGTTCTCTCACCGATCATAAGTTTCGTGCGCCGTATCGAATTAGGTGCGCCGCCGCT 127
Query 112 TCACCGGTGAAAAAACGGTATAACATCGCTCTGCTTCCCGGCGATGGTATCGGTCCCGAA 171
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 128 TCACCGGTGAAAAAACGGTATAACATCACTCTGCTTCCCGGCGATGGTATCGGTCCAGAA 187
Query 172 GTTATATCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGGTTTCTCCAAGGACTGGAGTTT 231
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 188 GTTATATCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGATTTCTCCAAGGACTAGAGTTT 247
Query 232 GATTTCCAGGAGATGCCTTTCGGAGGAGCAGCCTTGGATTTGGTCGGAGTTCC-TCTGCC 290
||||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||||
Sbjct 248 GATTTCCAGGAGATGCCTTTCGGCGGAGCAGCTTTGGATTTGGTCGGAGTTCCAT-TGCC 306
Query 291 GGAGGAAACTTCCACGGCTGCAAAACAGTCTGATGCCGTTCTTCTTGGAGCTATCGGAGG 350
||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 307 GGAGGAAACTTCCACTGCTGCTAAACAGTCTGATGCCATTCTTCTTGGAGCTATCGGAGG 366
Query 351 GTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGGTCT-CTTACACCTTC 409
|||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||
Sbjct 367 GTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGGTCTGCTTA-ACATTC 425
Query 410 GAAGAGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCACAGCTAGTTG 469
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 426 GAAGAGATCTCAATGTCTTTGCTAATTTGAGACCTGCTACAGTTTTACCACAGCTAGTTG 485
Query 470 ATGCTTCCACACTGAAGAAAGAAGTAGCACAAGGTGTTGATATGATGATTGTAAGGGAGC 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 ATGCTTCCACACTGAAGAAAGAAGTAGCACAAGGTGTTGATATGATGATTGTAAGGGAGC 545
Query 530 TCATTGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACCATCAATGAAAATGGCGAAG 589
||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 546 TCACTGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACGATCAACGAAAATGGCGAAG 605
Query 590 AAGTCGGTGTTAATACAGAGATCTACGCTGCTCACGAGATTGACAGAATTGCTCGTGTTG 649
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 AAGTCGGTTTTAATACAGAGATCTACGCTGCTCACGAGATTGACAGAATTGCTCGTGTTG 665
Query 650 CATTCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCTGTCGATAAAGCCAATGTGT 709
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 666 CATTCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCTGTTGACAAAGCCAATGTCT 725
Query 710 TGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGCCTCTGAATATCCAGATG 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 TGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGCCTCTGAATATCCAGATG 785
Query 770 TTGAACTATCGCATATGTATGTCGATAATGCTGCAATGCAGCTTATCCGTTACCCGAAAC 829
|||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||
Sbjct 786 TTGAACTATCACATATGTATGTCGATAATGCTGCGATGCAGCTTGTCCGTGACCCGAAAC 845
Query 830 AGTTTGACACAATCGTCACCAATAACATTTTTGGTGATATATTGTCTGATGAAGCTTCAA 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 846 AGTTTGACACAATCGTCACCAATAACATTTTTGGTGATATATTGTCTGATGAAGCTTCAA 905
Query 890 TGATCACTGGAAGCATTGGGATGCTTCCATCTGCAAGTCTTGGTGAATCGGGACCTGGAC 949
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 906 TGATCACTGGTAGCATTGGGATGCTTCCATCTGCAAGTCTTGGTGAATCGGGACCTGGAC 965
Query 950 TCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAAGACAAGGCAAACCCAT 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 TCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAAGACAAGGCAAACCCAT 1025
Query 1010 TGGCCACCATTCTCAGTGCGGCGATGCTTCTCAAGTATGGACTTGGAGAAGAAACGGCTG 1069
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1026 TGGCCACCATTCTCAGTGCGGCGATGCTTCTCAAGTATGGACTTGGAGAAGAAAAGGCTG 1085
Query 1070 CAAAGAGGATTGAAGACGCGGTCTTGGATGCTCTGAACAAAGGTTTCAGAACCGGAGACA 1129
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1086 CAAAGATGATTGAAGACGCGGTCGTGGATGCTCTGAACAAAGGTTTCAGAACCGGAGACA 1145
Query 1130 TCTACTCCCCCGGAAATAAACTGGTGGGATGCAAGGAAATGGGTGAGGAGGTTCTCAAAT 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 TCTACTCCCCCGGAAATAAACTGGTGGGATGCAAGGAAATGGGTGAGGAGGTTCTCAAAT 1205
Query 1190 CACTGGACTCCAAAGTTCCAGCTACTGTTTAAGTTTACTGATGATTTAAAAAAGTGTGTA 1249
|| |||||||||||||||| | ||||||| | | | | |||||||
Sbjct 1206 CAGTGGACTCCAAAGTTCC---T---GTTTAAG---A---A--A---A-----GTGTGTA 1243
Query 1250 GCCCTTGGTTTTACGGTTACTTGTATGCTAATCCATGTATTAGAAACTGTAGTATTCTAG 1309
|||||||||||||| ||||||| | ||||||| |||||||||||||||||| | || |||
Sbjct 1244 GCCCTTGGTTTTACTGTTACTTTTTTGCTAATACATGTATTAGAAACTGTATTCTTGTAG 1303
Query 1310 CTTTTATAATAAATAAAATATTTGGGATCGAATTCTGCAATTTAAAGACAAGATTCTCC 1368
|||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct 1304 CTTTTATAATAA-TAAAATATTTGGGATCGA-TTCTGCAATTCAAAGACAAAATTCTCC 1360
> AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydrogenase
2 | chr1:30287763-30290298 FORWARD LENGTH=1460
Length=1460
Score = 1098 bits (594), Expect = 0.0
Identities = 952/1125 (85%), Gaps = 24/1125 (2%)
Strand=Plus/Plus
Query 109 GCTTCACC-GGTGAAAAAACGGTATAACATCGCTCTGCTTCCCGGCGATGGTATCGGTCC 167
||||| || ||| |||||||| || | |||| |||| |||||||| || || ||||||||
Sbjct 176 GCTTCCCCTGGT-AAAAAACGATACACCATCACTCTCCTTCCCGGAGACGGCATCGGTCC 234
Query 168 CGAAGTTATATCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGGT-TTCTCCAAGGACTGG 226
|| ||| | || |||| || |||||||||||| ||||||| | || | ||||| |||
Sbjct 235 GGAGGTTGTCTCCATTGCCAAAAATGTGCTTCAGCAAGCTGGATCTT-TGGAAGGAGTGG 293
Query 227 AGTTTGATTTCCAG-GAGATG-CCTTTCGGAGGAGCAGCCTTGGATTTGGTCGGAGT-TC 283
| ||| | |||| | |||||| || || |||||||| || ||||||||||||||||| |
Sbjct 294 AATTTAACTTCC-GTGAGATGCCCATT-GGAGGAGCTGCTTTGGATTTGGTCGGAGTGCC 351
Query 284 CTCTGCCGGAGGAAACT-TCCACGGCTGCAAAACAGTCTGATGCCGTTCTTCTTGGAGCT 342
|| |||||||||| ||| | | | ||||||||| | || ||||| || |||||||||||
Sbjct 352 CT-TGCCGGAGGAGACTAT-CTCAGCTGCAAAAGAATCAGATGCAGTGCTTCTTGGAGCC 409
Query 343 ATCGGAGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAG-ATGGGTCT-CT 400
|| ||||||||||||||||| || ||||| ||||||||||| |||||| | |||| | ||
Sbjct 410 ATTGGAGGGTACAAATGGGATAACAATGAAAAACATCTGAGGCCTGAGAAGGGGT-TACT 468
Query 401 TACACCTTCGAAG-AGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCA 459
| || |||| | || ||||||||||||||| ||| |||||||||||||||| | |||
Sbjct 469 T-CAGATTCG-TGCAGCTCTCAAAGTCTTTGCAAATCTGAGACCTGCTACAGTCCTCCCA 526
Query 460 CAGCTAGTTGATGCTTCCACAC-TGAAGAAAGAAGTAGCACAAGGTGTTGATATGATGAT 518
||| |||| ||||||||||| | | |||| ||| |||||| ||||||||||| | ||| |
Sbjct 527 CAGTTAGTGGATGCTTCCAC-CTTAAAGAGAGAGGTAGCAGAAGGTGTTGATCTAATGGT 585
Query 519 TGTAAGGGAGCTCATTGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACCATCAATGA 578
|||||||||||| | |||||||||||||||||||||||||| ||||| | | ||||||
Sbjct 586 TGTAAGGGAGCTTACAGGAGGTATTTACTTTGGAGAGCCAAGGGGCATAAAGACCAATGA 645
Query 579 AAATGGCGAAGAAG-TCGGTGTTAATACAGAGATCTACGCTGCTCACGAGATTGACAGAA 637
||||||||| |||| | ||| ||||||| ||| | || ||||||||||||||||| ||||
Sbjct 646 AAATGGCGAGGAAGTTGGGT-TTAATACTGAGGTTTATGCTGCTCACGAGATTGATAGAA 704
Query 638 TTGCTCGTGTTGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCTGTCGATA 697
||||||||||||| |||||||||||| ||||| |||||||||||||||||||||| || |
Sbjct 705 TTGCTCGTGTTGCCTTCGAGACTGCTCGGAAACGGCGTGGCAAGCTGTGTTCTGTTGACA 764
Query 698 AAGCCAATGTGTTGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGCCTCTG 757
|||| ||||| ||||| || ||||| || ||||||||| |||||||||| ||||||||||
Sbjct 765 AAGCTAATGTTTTGGAAGCCTCAATCTTATGGAGGAAACGAGTAACAGCATTAGCCTCTG 824
Query 758 AATATCCAGATGTTGAACTATCGCATATGTATGTCGATAATGCTGCAATGCAGCTTATCC 817
||||||| |||||||| || || ||||||||||| || ||||| || ||||||||| | |
Sbjct 825 AATATCCTGATGTTGAGCTGTCACATATGTATGTTGACAATGCCGCGATGCAGCTTGTTC 884
Query 818 GTTACCCGAAACAGTTTGACACAATCGTCACCAATAACATTTTTGGTGATATATTGTCTG 877
|| |||| |||||||||||||| |||||||| || |||||||||||||||||||| || |
Sbjct 885 GTGACCCAAAACAGTTTGACACCATCGTCACAAACAACATTTTTGGTGATATATTATCCG 944
Query 878 ATGAAGCTTCAATGATCACTGGAAGCATTGGGATGCTTCCATCTGCAAGTCTTGGTGAAT 937
||||||||||||||||||| |||||||| || ||||| |||||||| ||||| |||| |
Sbjct 945 ATGAAGCTTCAATGATCACAGGAAGCATAGGAATGCTGCCATCTGCTAGTCTCAGTGATT 1004
Query 938 CGGGACCTGGACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAAGACA 997
|||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| || |
Sbjct 1005 CGGGACCTGGACTCTTTGAACCTATACATGGTTCTGCACCTGATATTGCTGGACAGGATA 1064
Query 998 AGGCAAACCCATTGGCCACCATTCTCAGTGCGGCGATGCTTCTCAAGTATGGACTTGGAG 1057
|||||||||||||||| |||||||| || || || |||||||| || || ||||||||||
Sbjct 1065 AGGCAAACCCATTGGCAACCATTCTAAGCGCTGCAATGCTTCTGAAATACGGACTTGGAG 1124
Query 1058 AAGAAACGGCTGCAAAGAGGATTGAAGACGCGGTCTTGGATGCTCTGAACAAAGGTTTCA 1117
|||||| ||| || ||||| ||||||||||| || |||| |||||||||||| || ||||
Sbjct 1125 AAGAAAAGGCAGCCAAGAGAATTGAAGACGCAGTGTTGGTTGCTCTGAACAACGGATTCA 1184
Query 1118 GAACCGGAGACATCTACTCCCCCGGAA-ATAAACTGGTGGGATGCAAGGAAATGGGTGAG 1176
|||| |||||||| |||||| | |||| | ||||||||||| |||||||| ||||| |||
Sbjct 1185 GAACTGGAGACATATACTCCGCGGGAACA-AAACTGGTGGGCTGCAAGGAGATGGGAGAG 1243
Query 1177 GAGGTTCTCAAATCACTGGACTCCAAAGTTCCAGCTACTGTTTAA 1221
|||||||| || ||| |||||||| ||||||||||| ||||||||
Sbjct 1244 GAGGTTCTGAAGTCAGTGGACTCCCAAGTTCCAGCTTCTGTTTAA 1288
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70933370085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5