BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473732
Length=2251
Score E
Sequences producing significant alignments: (Bits) Value
AT1G38131.1 | Symbols: | O-fucosyltransferase family protein |... 3437 0.0
AT1G38065.1 | Symbols: | O-fucosyltransferase family protein |... 2516 0.0
> AT1G38131.1 | Symbols: | O-fucosyltransferase family protein
| chr1:14293064-14296191 REVERSE LENGTH=2269
Length=2269
Score = 3437 bits (1861), Expect = 0.0
Identities = 2130/2257 (94%), Gaps = 30/2257 (1%)
Strand=Plus/Plus
Query 1 AGAAAAGAACTTCGTCAATGTTACTGAAAGTTTCCACAGATCCATCGTCTCCATGAGATC 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1 AGAAAAGAACTTCGTCAATGTTACTGAAAGTTTTCACAGATCCATCGTCTCCATGAGATC 60
Query 61 TCTGTGATTAACATTActctctctctctctctcaagctcatagtctcaaaaacccaaaaa 120
||||||| |||||||| || ||||| | |||||| |||| | |||||| ||| ||||||
Sbjct 61 TCTGTGAATAACATTA--CT-TCTCT-T-TCTCAAACTCAGACTCTCAATAACACAAAAA 115
Query 121 atcagatctttctctctcctcaCCAC--aaaaaaaTCGAAACtttttttttGTTTGTGCT 178
|||||||||||||||| ||||||| |||||||||||||| ||| | ||| ||||
Sbjct 116 CCCAGATCTTTCTCTCTCTTCACCACAAAAAAAAATCGAAAC----TTTAT-TTT-TGCT 169
Query 179 TGATGAAAAGCAAAATCCACCACCAGCCCAATGGCGGCAACAATGGTGTAGTTTCAAGTA 238
||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 170 TGATGAAGAGCAAAATCCACCACCAGCCCAATGGTAGCAACAATGGTGTTGTTTCAAGTA 229
Query 239 ACGATAATGGCTGCCGAAGTGAGTCTCCAAGCCCACCTTTATCTCCAAACCGCCGTGTCC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 ACGATAATGGCTGCCGAAGTGAGTCTCCAAGCCCACCTTTATCTCCAAACCGCCGTGTCC 289
Query 299 TCCGTCGTCAACGGCGGCAAACTTTACTCAGAGCTTCCTCTTTCTCTCTCCGGAGAAATC 358
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 290 TCCGTCGTCAACGGCGGCAAACTTTACTCAGAGCTTCTTCTTTCTCTCTCCGGAGAAATC 349
Query 359 TTCGTTACTTGCTTCTCCTTCCTATGATTTACGCTTCTGGGCTTCTCATGTGTGTCGGTC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 350 TTCGTTACTTGCTTCTCCTTCCTATGATTTACGCTTCTGGGCTTCTCATGTGTGTTGGTC 409
Query 419 CTTTCTCTGGTCTTGTCGGGTGGGTTTATGTTCCCGGGTCTGTTTATCGGAGCCCCGAGT 478
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 410 CTTTCTCTGGTCTTGTCGGATGGGTTTATGTTCCCGGTTCTGTTTATCGGAGCCCCGAGA 469
Query 479 TTTACCGGAAACTTAAAGATGACATTCTCTCTGACAATTCAACCGCCCTTGAGTTGTCTT 538
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 470 TTTACCGGAAACTTAAAGATGACATTTTCTCCGACAATTCAACCGCCCTTGAGTTGTCTT 529
Query 539 CTGTGTGGAAATTCAAAAGAAGACCAAAAATGCCAAAACCTTGTCCGAATTCAACAGTTT 598
|||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 530 CTGTCTGGAAATTCAAAAGAAGACCAAAGATGCCAAAACCTTGTCCTAATTCAACAGTTT 589
Query 599 CATCACATTTTGGTCTTAACAGAGAATCATCTGCTCTTGCTCCTAGTAGTGGTTACTTGA 658
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 590 CATCACATTTTGGTCTGAACAGAGAATCATCTGCTCTTGCTCCTAGTAGTGGTTACTTAA 649
Query 659 TCGTCGAGGCAAATGGCGGTCTTAATCAGCAGCGTTCCGCGATTTGCAATGCTGTGGCTG 718
|||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 650 TCGTGGAAGCAAATGGCGGTCTTAATCAGCAGCGTTCTGCGATTTGCAATGCTGTGGCTG 709
Query 719 TTGCCGGACTCCTAAACGCAGTTTTAGTCATACCGCAGTTTGAATTTCACGCTATTTGGA 778
| ||||| || || |||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 710 TAGCCGGGCTTCTTAACGCAGTTTTAGTCATACCGCGGTTTGAGTTTCACGCTATTTGGA 769
Query 779 AGGATTCAAGCAACTTTGGTGATATCTATGACGAAGATCATTTCATATCGCGCCTCGAAG 838
|||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||
Sbjct 770 AGGATTCAAGCAACTTTGGTGATATCTATGACGAAGATCACTTCATATCAAGCCTTGAAG 829
Query 839 GTTATGTGAAAATTGTGAGAGATGTTCCTGATGAGATCATGACTCGTTTTAGTTACAATG 898
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 830 GTTATGTGAAAATAGTGAGAGATGTTCCTGATGAGATAATGACTCGTTTTAGTTACAATG 889
Query 899 TTTCAAGTATCCCGACTATTCGTGTTCAAGCTTGGGCTACGGTGAACTACTATAACGGGG 958
|||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 890 TTTCAAGTATTCCTACTATTCGTGTTCAAGCTTGGGCTACTGTGAACTACTATAACGGGG 949
Query 959 AAGTCTATCCGGTTTTAAAGGAACATGGGGTTATACGGATTTCTCCTTTCGCAAATAGAT 1018
|||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 950 AAGTTTATCCGGTTTTAAAGGAACATGGGGTTATTCGGATAACTCCTTTCGCAAATAGAT 1009
Query 1019 TGGCGATGAGTGTTCCACCGTATATCCAACTTTTGAGGTGCATAGGTAATTACAAAGCAT 1078
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1010 TGGCGATGAGTGTTCCACCGTATATACAACTTTTGAGGTGCATAGCTAATTACAAAGCAT 1069
Query 1079 TGAAGTTTTCTTCACCTATATCTACACTAGCTGAAAAGTTAGTCGATCGGATGGTTGAGA 1138
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1070 TGAAGTTTTCTTCACCTATATCAACACTAGCTGAGAAGTTAGTCGATCGGATGGTTGAGA 1129
Query 1139 AAAGCTCAGCGACCGGAGGAAAGTATGTCTCGGTCCACCTTCGATTTGAGGAGGACATGG 1198
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1130 AAAGCTCGGCGACCGGAGGAAAGTATGTCTCGGTCCACCTTCGATTTGAGGAGGACATGG 1189
Query 1199 TGGCCTTCTCATGTTGTCTCTACGAAGGTGGAAGAGCTGAGAAATCTGAAATGGATGTGA 1258
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 TGGCATTCTCATGTTGTCTCTACGAAGGTGGAAGAGCTGAGAAATCTGAAATGGATGTGA 1249
Query 1259 TTAGACAGAAAAGTTGGAAAGGAAAGTTCAAACGAAGAGATCGTGTCATTAGGCCTGACC 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1250 TTAGACAGAAAAGTTGGAAAGGAAAGTTCAAACGAAGAGATCGTGTCATTAGGCCCGACC 1309
Query 1319 TTAACCGAGTTAATGGAAAATGTCCCCTTACCCCGTTAGAGGTCGGTATGATGCTCCGTG 1378
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1310 TTAACCGAGTTAACGGAAAATGTCCCCTTACCCCATTAGAGGTCGGTATGATGCTCCGTG 1369
Query 1379 GTATGGGATTTGATAACAACACTTCGATATATTTGGCCTCGGGAAGAATCTACCAACCTG 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1370 GTATGGGATTTGATAACAACACTTCGATATATTTGGCCTCGGGAAGAATCTACCAACCTG 1429
Query 1439 AGAAACATTTGGCTCCTCTCCAGGAAATGTTTCCCCGTCTCTACACAAAAGAGTCTCTTG 1498
||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 1430 AGAAACATTTGGCTCCTCTTCAAGAAATGTTTCCTCGTCTCTACACAAAAGAGTCTCTTG 1489
Query 1499 CAAGTCCAGAAGAGCTTGCCCCATTTGAGGGACACTCTTCCAGAATGGCTGCTTTGGACT 1558
||| |||||| ||||||||||||||| ||||| | || ||||||||||||||||||||||
Sbjct 1490 CAACTCCAGAGGAGCTTGCCCCATTTCAGGGATATTCCTCCAGAATGGCTGCTTTGGACT 1549
Query 1559 ATACGGTGAGCTTGTTAAGTGAAGTGTTTGTGACAACTCAAGGTGGAAACTTTCCTCATT 1618
| || ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1550 ACACAGTGAGTTTGCTAAGTGAAGTCTTTGTGACAACTCAAGGTGGAAACTTTCCTCATT 1609
Query 1619 TTTTGATGGGCCATCGAAGATTCCTCTTCGGTGGACATGCAAAAACTGTCATACCCGACA 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1610 TTTTGATGGGCCATCGAAGATTCCTCTTCGGTGGACATGCAAAAACTGTCATACCCGACA 1669
Query 1679 AACCCAAACTCGTTCTCCTTCTTCAGGACATGGAGATGAGGTGGGAAGTTTTCAAAAAGG 1738
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1670 AACCCAAACTCGTTCTCCTTCTTCAGGACATGGAAATGAGGTGGGAAGTTTTCAAAAAGG 1729
Query 1739 AGATGAAACTGATGCTAGGGGAAAGCGATAGAAAGGGAGTGATGGTACCTAGAGTCAGGA 1798
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1730 AGATGAAACTGATGCTAGGGGAAAGCGATAGAAAGGGAGTGATGGTACCGAGAGTCAGGA 1789
Query 1799 AGATAAACCGGAAAACTTCAATTTACACATACCCTTTACCCGAATGCGAATGCATCTTCC 1858
|||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 1790 AGATCAACCGGAAAACTTCGATTTACACATACCCGTTACCCGAATGCGAATGCATCTTCC 1849
Query 1859 ATTTGTCTTCCAATTTTTCAAGTACCGGAAACATACAGAATCTTGGAGCACTACATCCCA 1918
||||||||||||||||||||| ||||||||||| || |||||||| || ||||| |
Sbjct 1850 ATTTGTCTTCCAATTTTTCAAACACCGGAAACATTTTGAGCCTTGGAGCTCTTCATCC-A 1908
Query 1919 -CTTCCAACCTCATGAA-TTCTGCAAGACTATAGTCCCCGAGTCAATATGACCCTTACAC 1976
||||||||||||| || |||||||||||||||||||| |||||| | ||||||||||||
Sbjct 1909 TCTTCCAACCTCAT-AAGTTCTGCAAGACTATAGTCCCTGAGTCATTTTGACCCTTACAC 1967
Query 1977 TGAAGC-CTTGAGCCAAGTCCTGAACGtttttttGCTCTTGACAGAAGCGAGGAATCAGA 2035
|||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1968 TGAAGCTCT-GAGCCAAGTCCTGAATGTTTTTTTGCTCTTGACGGAAGCGAGGAATCAGA 2026
Query 2036 TATGGAGGAGATCTTTACAAGGAAATTGAGTTCACATAAGTGTAAGAAATCTCTAGGATT 2095
||| |||| || |||| |||||||||||||||||||||||| |||||||||||
Sbjct 2027 TAT--------TCTT-ACGAGGAGATTGAGTTCACATAAGTGTAAGAACTCTCTAGGATT 2077
Query 2096 GAA-GCTGTGTTGCTTGCTATTTCTGGTTAGGAGTTAGGACAGTCACAAAAACAGGGGTG 2154
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2078 GAAAGCTGTGTTGCTTGCTACTTCTGGTTAGGAGTTAGGACAGTCACAAAAACAGGGGTG 2137
Query 2155 TGATTTTCTGTACTTAGTGTTGTTATCTTTTTTGTGCATTACTTACGTTGTCCCTCAAAT 2214
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2138 TGATTTTCTGTACTTA-TGTTGTTATCTTTTTTGTGCATTACTTACGTTGTCACTCAAAT 2196
Query 2215 TGTTCAAGTGTATAGAAATTTTACATCGCTCTGGTGG 2251
|||||||||||||||||||||||||||| ||||||||
Sbjct 2197 TGTTCAAGTGTATAGAAATTTTACATCGTTCTGGTGG 2233
> AT1G38065.1 | Symbols: | O-fucosyltransferase family protein
| chr1:14289578-14292060 REVERSE LENGTH=1741
Length=1741
Score = 2516 bits (1362), Expect = 0.0
Identities = 1547/1635 (95%), Gaps = 17/1635 (1%)
Strand=Plus/Plus
Query 621 AGAATCATCTGCTCTTGCTCCTAGTAGTGGTTACTTGATCGTCGAGGCAAATGGCGGTCT 680
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct 84 AGAATCATCTGCTCTTGCTCCTAGTAGTGGTTACTTAATCGTGGAAGCAAATGGCGGTCT 143
Query 681 TAATCAGCAGCGTTCCGCGATTTGCAATGCTGTGGCTGTTGCCGGACTCCTAAACGCAGT 740
||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||||||
Sbjct 144 TAATCAGCAGCGTTCTGCGATTTGCAATGCTGTGGCTGTAGCCGGGCTTCTTAACGCAGT 203
Query 741 TTTAGTCATACCGCAGTTTGAATTTCACGCTATTTGGAAGGATTCAAGCAACTTTGGTGA 800
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 204 TTTAGTCATACCGCGGTTTGAGTTTCACGCTATTTGGAAGGATTCAAGCAACTTTGGTGA 263
Query 801 TATCTATGACGAAGATCATTTCATATCGCGCCTCGAAGGTTATGTGAAAATTGTGAGAGA 860
|||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||
Sbjct 264 TATCTATGACGAAGATCACTTCATATCAAGCCTTGAAGGTTATGTGAAAATAGTGAGAGA 323
Query 861 TGTTCCTGATGAGATCATGACTCGTTTTAGTTACAATGTTTCAAGTATCCCGACTATTCG 920
||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 324 TGTTCCTGATGAGATAATGACTCGTTTTAGTTACAATGTTTCAAGTATTCCTACTATTCG 383
Query 921 TGTTCAAGCTTGGGCTACGGTGAACTACTATAACGGGGAAGTCTATCCGGTTTTAAAGGA 980
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 384 TGTTCAAGCTTGGGCTACTGTGAACTACTATAACGGGGAAGTTTATCCGGTTTTAAAGGA 443
Query 981 ACATGGGGTTATACGGATTTCTCCTTTCGCAAATAGATTGGCGATGAGTGTTCCACCGTA 1040
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 444 ACATGGGGTTATTCGGATAACTCCTTTCGCAAATAGATTGGCGATGAGTGTTCCACCGTA 503
Query 1041 TATCCAACTTTTGAGGTGCATAGGTAATTACAAAGCATTGAAGTTTTCTTCACCTATATC 1100
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 504 TATACAACTTTTGAGGTGCATAGCTAATTACAAAGCATTGAAGTTTTCTTCACCTATATC 563
Query 1101 TACACTAGCTGAAAAGTTAGTCGATCGGATGGTTGAGAAAAGCTCAGCGACCGGAGGAAA 1160
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 564 AACACTAGCTGAGAAGTTAGTCGATCGGATGGTTGAGAAAAGCTCGGCGACCGGAGGAAA 623
Query 1161 GTATGTCTCGGTCCACCTTCGATTTGAGGAGGACATGGTGGCCTTCTCATGTTGTCTCTA 1220
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 624 GTATGTCTCGGTCCACCTTCGATTTGAGGAGGACATGGTGGCATTCTCATGTTGTCTCTA 683
Query 1221 CGAAGGTGGAAGAGCTGAGAAATCTGAAATGGATGTGATTAGACAGAAAAGTTGGAAAGG 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 CGAAGGTGGAAGAGCTGAGAAATCTGAAATGGATGTGATTAGACAGAAAAGTTGGAAAGG 743
Query 1281 AAAGTTCAAACGAAGAGATCGTGTCATTAGGCCTGACCTTAACCGAGTTAATGGAAAATG 1340
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 744 AAAGTTCAAACGAAGAGATCGTGTCATTAGGCCCGACCTTAACCGAGTTAACGGAAAATG 803
Query 1341 TCCCCTTACCCCGTTAGAGGTCGGTATGATGCTCCGTGGTATGGGATTTGATAACAACAC 1400
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 TCCCCTTACCCCATTAGAGGTCGGTATGATGCTCCGTGGTATGGGATTTGATAACAACAC 863
Query 1401 TTCGATATATTTGGCCTCGGGAAGAATCTACCAACCTGAGAAACATTTGGCTCCTCTCCA 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 864 TTCGATATATTTGGCCTCGGGAAGAATCTACCAACCTGAGAAACATTTGGCTCCTCTTCA 923
Query 1461 GGAAATGTTTCCCCGTCTCTACACAAAAGAGTCTCTTGCAAGTCCAGAAGAGCTTGCCCC 1520
||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 924 AGAAATGTTTCCTCGTCTCTACACAAAAGAGTCTCTTGCAACTCCAGAGGAGCTTGCCCC 983
Query 1521 ATTTGAGGGACACTCTTCCAGAATGGCTGCTTTGGACTATACGGTGAGCTTGTTAAGTGA 1580
|||| ||||| | || ||||||||||||||||||||||| || ||||| ||| |||||||
Sbjct 984 ATTTCAGGGATATTCCTCCAGAATGGCTGCTTTGGACTACACAGTGAGTTTGCTAAGTGA 1043
Query 1581 AGTGTTTGTGACAACTCAAGGTGGAAACTTTCCTCATTTTTTGATGGGCCATCGAAGATT 1640
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1044 AGTCTTTGTGACAACTCAAGGTGGAAACTTTCCTCATTTTTTGATGGGCCATCGAAGATT 1103
Query 1641 CCTCTTCGGTGGACATGCAAAAACTGTCATACCCGACAAACCCAAACTCGTTCTCCTTCT 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1104 CCTCTTCGGTGGACATGCAAAAACTGTCATACCCGACAAACCCAAACTCGTTCTCCTTCT 1163
Query 1701 TCAGGACATGGAGATGAGGTGGGAAGTTTTCAAAAAGGAGATGAAACTGATGCTAGGGGA 1760
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 TCAGGACATGGAAATGAGGTGGGAAGTTTTCAAAAAGGAGATGAAACTGATGCTAGGGGA 1223
Query 1761 AAGCGATAGAAAGGGAGTGATGGTACCTAGAGTCAGGAAGATAAACCGGAAAACTTCAAT 1820
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 1224 AAGCGATAGAAAGGGAGTGATGGTACCGAGAGTCAGGAAGATCAACCGGAAAACTTCGAT 1283
Query 1821 TTACACATACCCTTTACCCGAATGCGAATGCATCTTCCATTTGTCTTCCAATTTTTCAAG 1880
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 TTACACATACCCGTTACCCGAATGCGAATGCATCTTCCATTTGTCTTCCAATTTTTCAAA 1343
Query 1881 TACCGGAAACATACAGAATCTTGGAGCACTACATCCCA-CTTCCAACCTCATGAA-TTCT 1938
||||||||||| || |||||||| || ||||| | ||||||||||||| || ||||
Sbjct 1344 CACCGGAAACATTTTGAGCCTTGGAGCTCTTCATCC-ATCTTCCAACCTCAT-AAGTTCT 1401
Query 1939 GCAAGACTATAGTCCCCGAGTCAATATGACCCTTACACTGAAGC-CTTGAGCCAAGTCCT 1997
|||||||||||||||| |||||| | |||||||||||||||||| || ||||||||||||
Sbjct 1402 GCAAGACTATAGTCCCTGAGTCATTTTGACCCTTACACTGAAGCTCT-GAGCCAAGTCCT 1460
Query 1998 GAACGtttttttGCTCTTGACAGAAGCGAGGAATCAGATATGGAGGAGATCTTTACAAGG 2057
||| ||||||||||||||||| ||||||||||||||||||| |||| || |||
Sbjct 1461 GAATGTTTTTTTGCTCTTGACGGAAGCGAGGAATCAGATAT--------TCTT-ACGAGG 1511
Query 2058 AAATTGAGTTCACATAAGTGTAAGAAATCTCTAGGATTGAA-GCTGTGTTGCTTGCTATT 2116
| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
Sbjct 1512 AGATTGAGTTCACATAAGTGTAAGAACTCTCTAGGATTGAAAGCTGTGTTGCTTGCTACT 1571
Query 2117 TCTGGTTAGGAGTTAGGACAGTCACAAAAACAGGGGTGTGATTTTCTGTACTTAGTGTTG 2176
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1572 TCTGGTTAGGAGTTAGGACAGTCACAAAAACAGGGGTGTGATTTTCTGTACTTA-TGTTG 1630
Query 2177 TTATCTTTTTTGTGCATTACTTACGTTGTCCCTCAAATTGTTCAAGTGTATAGAAATTTT 2236
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1631 TTATCTTTTTTGTGCATTACTTACGTTGTCACTCAAATTGTTCAAGTGTATAGAAATTTT 1690
Query 2237 ACATCGCTCTGGTGG 2251
|||||| ||||||||
Sbjct 1691 ACATCGTTCTGGTGG 1705
Score = 91.6 bits (49), Expect = 3e-17
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 568 ATGCCAAAACCTTGTCCGAATTCAACAGTTTCATCACATTTTGGTCTTAACAGAG 622
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1 ATGCCAAAACCTTGTCCTAATTCAACAGTTTCATCACATTTTGGTCTGAACAGAG 55
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111696212625
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5