BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473745
Length=4401
Score E
Sequences producing significant alignments: (Bits) Value
AT5G17910.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 3328 0.0
> AT5G17910.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT2G29620.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
| chr5:5927402-5932722 FORWARD LENGTH=4532
Length=4532
Score = 3328 bits (1802), Expect = 0.0
Identities = 2349/2599 (90%), Gaps = 94/2599 (4%)
Strand=Plus/Plus
Query 1 AGAAACAACCTGGAAAAATAT--AAA-A-ATGATCAGTGATCGGTCGTCGGAGTTCAGAG 56
||| || |||||||||||||| ||| | ||||| ||||||| | ||||||||||||||
Sbjct 45 AGAGACGACCTGGAAAAATATAAAAAGAGATGATTAGTGATC-G--GTCGGAGTTCAGAG 101
Query 57 TTCAGATTCGGAGATTATTCGTCATTAAGATCAGAATGTCCTACAGATGGATTTGCAATC 116
|||||||||||||||||||| | |||| |||||||| ||| |||| ||||||||||||||
Sbjct 102 TTCAGATTCGGAGATTATTCATGATTATGATCAGAACGTCGTACAAATGGATTTGCAATC 161
Query 117 ATCCCTTTCTTTTGGGGTTCATTGGGTTTTTGTATTTTCTGCATAGATATTGTCCTCTTC 176
||||||||||| | || ||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct 162 ATCCCTTTCTTCTCGGCTTCGTTGCGTTTTTGTATTATCTGCATAGATATTGTCCTCTTT 221
Query 177 TATTTGCTCCTTTGGTCACTGCATCTCCTGTTTTGGTGTGTACTTTCGTTTTGCTTGGCA 236
| |||||||| || || ||||| |||||||||||||||||||||||||| |||||||| |
Sbjct 222 TGTTTGCTCCCTTAGTGACTGCGTCTCCTGTTTTGGTGTGTACTTTCGTCTTGCTTGGTA 281
Query 237 CGATTTTGAGTTTTGGAGAGCCAAACATTCCTGAAATCGATAAGGAACCAGAGATTGTCC 296
| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||
Sbjct 282 CCATTTTGAGTTTTGGAGAGCCAAACATTCCTGAAATCGAAAAGGATCCAGAGATTTTCC 341
Query 297 ACGAGGCTGCTCCTTTTAGAACTGAGCTTTCGAGGGATGCTAATGTTACTGTTGTTG--A 354
|||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 342 ACGAGGCTGCACCTCTTAGAACTGAGGTTTCGAGGGATGCTAATGTTACTGTTGTTGATA 401
Query 355 GA-GAGGAGATCAGAGTTTTACAGTGGAGAGTTTCGTGGGGGCAGAGAAAGATGTGCTTG 413
|| |||||||| |||||||||| || ||||||||||| ||||| ||||||| ||||||||
Sbjct 402 GAGGAGGAGATGAGAGTTTTACCGTAGAGAGTTTCGTCGGGGCGGAGAAAGTTGTGCTTG 461
Query 414 AGGATGGGAATGATGATGTTGATAGATTAGTGGAAAACCTACTCAGTGAAGTTGAGGACA 473
||||||| |||||||||| ||| ||||||||||| | || | ||||||| |||||||||
Sbjct 462 AGGATGGAAATGATGATGCTGAAAGATTAGTGGATAGCCAATTCAGTGAGGTTGAGGACG 521
Query 474 ATGGTCGGCCTTTTGATTATAGGCCTTTAGTTGATGAGACTCTTGATGAGATTAAACGGG 533
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 522 ATGGCCGGCCATTTGATTATAGGCCTTTAGTTGATGAGACTCTTGATGAGATTAAACGGG 581
Query 534 ATCCTCAGGTAAGGTTTGAGGAGAAAGCATTTATTTTGGATGTGGACAAGATGGGAGAAA 593
|| |||| ||||| |||||||||||||||||||||||||||||||| |||| |||||| |
Sbjct 582 ATACTCATGTAAGATTTGAGGAGAAAGCATTTATTTTGGATGTGGAAAAGAAGGGAGACA 641
Query 594 GAGTAGAGGAGAAACTGATTGAAAATGATGGGACACAAGCTTTGGGTGGAGAGCAATCGA 653
||| ||| |||||||||||||||||||| ||| | | ||||| |||||| ||||
Sbjct 642 GAGAAGATGAGAAACTGATTGAAAATGACGGG-----A-C---GGGTGCAGAGCAGTCGA 692
Query 654 GGAAAAACGGATCTCTT-TATGAAAGGATTGACGATTCCATGGATGATCAGATGGATGTA 712
||| ||| |||||| || |||| || | | | ||||||||||||||||||||
Sbjct 693 GGACAAATGGATCT-TTATATG-AA--A--G--G-----ATGGATGATCAGATGGATGTT 739
Query 713 TCTCCAGTTTCACCTTGGAGACCAATGAGGCATGAAGAGGATGAGGATGATGATGCGGAC 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 740 TCTCCAGTTTCACCTTGGAGACCAATGAGGCATGAAGAGGATGAGGATGATGATGCGGAC 799
Query 773 CGTGATGACTCGC-TGGATTCTGGGTCTGATGGTGCAGAAAGTTCTTCGCCGGATGCTTC 831
||||||||||| | | |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 800 CGTGATGACTC-CTTAGATTCTGGGTCTGATGGTGCAGAAAGTTCTTCACCTGATGCTTC 858
Query 832 TATGACAGACATCA-TCCCGATGCTTGACGAGCTTCACCCGCTTTTACACTCAGAAGCTC 890
|||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 859 TATGACAGACATCATTCCC-ATGCTTGACGAGCTTCACCCGCTTTTACTCTCAGAAGCTC 917
Query 891 CTAGTCGTGGTATTGCAGATGGTGAAGGATCAGATGCAGCTTCAGAGGGGCCACATAGGA 950
||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 918 CTACTCGTGGTATTGTAGATGGTGAAGGATCTGATGCAGCTTCAGAGGGGCCAC------ 971
Query 951 GTAGTAGTGATGAAGGTAGGAGTAGTAGTGATGAAGGAATGGAGTCTGATGTTGACAGtg 1010
| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 972 -------------A--TAGGAGTAGTAGTGATGAAGGAATGGAGTCTGATGGTGACAGTG 1016
Query 1011 aaagtcatggagaagaaggcgacaacgagaatgaagatgaggaagaagatgaagaag-ag 1069
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||
Sbjct 1017 AAAGTCATGGAGAAGAAGGCGATAACGAGAATGAAGATGAGGAAGAGGATGAAGAAGAAG 1076
Query 1070 --gaagaggaacaggaacatgaaaagaaagaagataaggacgacgaaagTAAATCAGCAA 1127
|| |||||| || |||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 1077 AAGATGAGGAAGAGAAACAGGAAAAGAAGGAAGATAAGGACGACGAAAGTAAATCTGCAA 1136
Query 1128 TCAAGTGGACAGAGGCTGACCAAAGAAATGTTATGGATCTAGGAAGTCTTGAACTTGAAA 1187
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 TCAAATGGACAGAGGCTGACCAAAGAAATGTTATGGATCTAGGAAGTCTTGAACTTGAAA 1196
Query 1188 GAAACCAAAGGTTGGAGAATCTTATTGCCAGGAGAAGGGCTCGCCACAATATGAGACTGA 1247
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1197 GAAACCAGCGGTTGGAGAATCTTATTGCCAGGAGAAGGGCTCGTCACAATATGAGACTAA 1256
Query 1248 TGGCAGAGAGAAATCTTATTGATTTTGACAGTGCTGATATTCCCTTTAATATGCCGCCAA 1307
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1257 TGGCAGAAAGAAATCTTATTGATTTTGATAGTGCTGATATTCCCTTTAATATGCCGCCAA 1316
Query 1308 TCTCAACTGCTAGGCAGAATCCATTTGATGCTCCATATGATTCCTATGATGATATGGGAT 1367
|||||||||| ||||| ||||||||||||| | |||||||||| ||||||||||| |
Sbjct 1317 TCTCAACTGCAAGGCATAATCCATTTGATGTTTCATATGATTCGTATGATGATAT--G-- 1372
Query 1368 TACCACCTATCCCTGGCTCTGCCCCGTCCATTATGTTTGCGAGGAGAAACCCATTTGATC 1427
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1373 -----CCTATCCCTGGTTCTGCCCCGTCCATTATGTTTGCGAGGAGAAATCCATTTGACC 1427
Query 1428 TTCCATATGAGCCAAATGAAGAAAAGCCAGACCTC-AAGGCTGACGGTTTCCAAGAAGAG 1486
||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||
Sbjct 1428 TTCCATATGAGCCAAATGAAGAAAAGCCAGACCTCAAAGG-TGACGGTTTTCAGGAAGAG 1486
Query 1487 TTCTCTTCTCAACAACCAAAGGAT-CAAGTGTTCAGAAGACATGAAAGTTTCAGTGTAGG 1545
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 1487 TTCTCTTCTCAACAACCAAAGGATCCAA-TGTTCAGAAGACATGAAAGTTTCAGTGTAGG 1545
Query 1546 CCCATCAATGCTTGGAGGTCCTAGGCATGATAGGCTACGACCTTTCTTTGTGCTAGAAAG 1605
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1546 CCCATCAATGCTTGGAGGTCCTAGACATGATAGGCTACGACCTTTCTTTGTGTTAGAAAG 1605
Query 1606 ATTAGCAAATGAGGGAACGAGCTATTATCCATTTGAAAGGCAGCTCAGTGAAGTCAGTGA 1665
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1606 ATTAGCCAATGAGGGAACGAGCTATTATCCATTTGAAAGGCAGCTCAGTGAAGTTAGTGA 1665
Query 1666 ATCAAAAGTCAGTTCGGTTCCTGATACTGAATCTGTGTGCACAGTCCTAGAGGATGATGA 1725
||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1666 ATCAAAAGTTAGTTCTATTCCTGATACTGAATCTGTGTGCACAGTCCTGGAGGATGACGA 1725
Query 1726 AAAGAAGGTGGATGAACATAATGCTGATCGAGAAACCGAAATTGCTAAAGTTGATATGGC 1785
|||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||
Sbjct 1726 AAAGAAGGTGGATGAAAATAATGCTGACCGAGAAACCAAAATTGCTAAAGTTGATATGGT 1785
Query 1786 TTCTGACCATGATGAAGAAAA-AAGCCATTCAGCTTCTGACCATGATGAAGAAAAAAGCC 1844
||||||| ||||||||||||| || |||||| ||||||||||| ||||||||||| || |
Sbjct 1786 TTCTGACAATGATGAAGAAAATAA-CCATTCGGCTTCTGACCACGATGAAGAAAATAGTC 1844
Query 1845 ATTCAGCTTCTGACCATGATGAAGAAAAAAGCCATTCGTCTGAGGATTCCGATTTCGATG 1904
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1845 ATTCAGCTTCTGACCATGATGAAGAAAAAAGCCATTCGTCCGAGGATTCCGATTTCGATG 1904
Query 1905 AACAAGCTGATAGCAGAAAGCTTCATAATGATGTGGCTGAGATAGTACTGGGAAGTGGAG 1964
||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||| | |
Sbjct 1905 AACAAGCTGATAGCAAAAAACTTCACCATGATGTGGCTGAGATAGTACTAGGAAGT-G-G 1962
Query 1965 AAGAAACACACCATGATCAATCGAACATGATGGAAGGAGAAACTTCTGATAAAGGAAATC 2024
|||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |
Sbjct 1963 -TGAAACACACCATGAGCAATCGGACATGATGGAAGGAGAAACTTCTGATAAGGGAAAAC 2021
Query 2025 TTGATGAAGAGTATTTCAGTGATAGTGATTCATCTTTATCAGAGAAAGAAGAAAATATGC 2084
|||||| | || |||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2022 TTGATG-A-AG----TCAGTGATAGTGATTCATCTTTATCAGAGAAAGAAGAAAAGATAC 2075
Query 2085 GGGATATCAGTGAAGATGAAGCAATGTTGATTTCGGAACGGGTAGTTGATCTTCATGAAG 2144
| |||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||
Sbjct 2076 GTGATATCAGTGAAGATGAAGCAATGTTAATTTCAGAACAAGTAGTTGATCTTCATGAAG 2135
Query 2145 AATCAGGTGCGTCTTCCCAGCCTTCTTTTGGAGAATTAGAAATCAATGGGGCTAG-GGTG 2203
||| ||| |||||||| | |||||||||||||||||||||||||||| |||||| || |
Sbjct 2136 AATTAGGGGCGTCTTCACTGCCTTCTTTTGGAGAATTAGAAATCAATATGGCTAGAGG-G 2194
Query 2204 GTGGAGGATGGTTACCACCATGATGAAGCTCGTGCTGAAGAATCTTTCATTACTGCGCAT 2263
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2195 GTGGAGGATGATTATCACCATGATGAAGCTCGTGCTGAAGAATCTTTCATTACTGCGCAT 2254
Query 2264 CCTTCACTTGATGAGTCAGCAATTCATGCTCTTTGTGGTTTGGGAGACGGCCACCACGAG 2323
|| |||||||| |||||||| || |||| ||||||||||||||| ||||| | ||||||
Sbjct 2255 CCGTCACTTGACGAGTCAGCCATACATGTTCTTTGTGGTTTGGGGGACGGTGATCACGAG 2314
Query 2324 GAACCTGTTTACGATTCGAGTCCTCCCTCAGGCAGTAGATTCCCATCATTTTCTTCTGTG 2383
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2315 GAACCTGTTTACGATTCGAGTCCTCCCTCAGGCAGTAGATTCCCATCATTTTCTTCCGTA 2374
Query 2384 TCGTCGTCTGATTACAAACCAGATCTACCTgaaaagaatggggaagaagtagaagaaaat 2443
||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2375 TCGTC-T--GATTACAAACCAGATCTACCTGAAAAGAATGGGGAAGAAATAGAAGAAAAT 2431
Query 2444 gaagagaaagaacatgaagTTTATTCTAAAAGCATAGGTCCTGAGGAAATTCATTCCACT 2503
||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| |||
Sbjct 2432 GAAGAGAAAGAACGTGAAGTTTATTCTGAAAGTATAGGTCCTGAGGAAATTCATTCTACT 2491
Query 2504 TCTAATGAGACTGAAACAAGGACAAAG-GAAGTAGGAGA-AACTAGCATGCATGTAACAA 2561
||||||||||||||||||||||||| | ||||||||||| || |||||||||||| |||
Sbjct 2492 TCTAATGAGACTGAAACAAGGACAA-GCGAAGTAGGAGAGAA-TAGCATGCATGTTACAG 2549
Query 2562 GAGAGGCAAGCCTTGTCAT 2580
|||||||||||||||||||
Sbjct 2550 GAGAGGCAAGCCTTGTCAT 2568
Score = 1332 bits (721), Expect = 0.0
Identities = 916/1007 (91%), Gaps = 26/1007 (3%)
Strand=Plus/Plus
Query 2695 GGAGCATGT-GACAACACTGGAAGAATCACCTGATGTGGTACGTGACATAGCTGAAACTT 2753
||||||| | |||| ||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 2572 GGAGCAT-TCGACACCACTGGAAGAATCACCTGATGTGGTGCATGACATAGCTGAAACTT 2630
Query 2754 CAGTTAACAGGTCAGTAGCTGAAGAGATAATGCACGAGGAAGAGGAATCCCAGAAACAAA 2813
|||| |||| |||||||| ||||||||||||| |||||||||||||| | || |||||||
Sbjct 2631 CAGTAAACAAGTCAGTAGTTGAAGAGATAATGTACGAGGAAGAGGAAGCTCAAAAACAAA 2690
Query 2814 AAGATGAAGCCAGTCCTCAAACATTCAATGCAGACATCCCAATAGATAATTATGCCACTT 2873
||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||
Sbjct 2691 AAGATGAAGTCAGTCCTCAAACATTCAATGCTGACATCCCAATAGATAGTTATGCCAGTT 2750
Query 2874 TGTCTTCTGGAGCAGTTGAGTATGTTGAGACGCATTCTTTTAATGATGAAGATGTTCCGC 2933
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | |
Sbjct 2751 TGTCTTCTGGAGCAGTTGAGTATGTTGAGACGCATTCATTTAATGACGAAGATGTTGCAC 2810
Query 2934 AGTTGGAACAAGAACCAGCTCACTCATCAGTTCTTGATGATGAGGAAGAAATTAACCCCG 2993
|||||||||||||||||| |||||||| ||||| ||||| ||||||||||| | || ||
Sbjct 2811 AGTTGGAACAAGAACCAGTTCACTCATTAGTTCATGATGCTGAGGAAGAAACTCACAACG 2870
Query 2994 ACCAAACAATGGATATCGAAGTAGACTCTGTAAATGCTGGTTCCCAAAATGTGGGATCTG 3053
|||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||
Sbjct 2871 ACCAAACAATGGATATTGAAGTAGACTCTGTAAATGCTAGTGCCCAAAATGTGGGATCTG 2930
Query 3054 AAGAAACAACTCCATCTGAATCAGATAGAGAACTGACTTGGTCAGATAAATCTGTGGTAG 3113
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2931 AAGAAACAAGTCCATCTGAATCAGATAGAGAACTGACATGGTCAGATAAATCTGTGGTAG 2990
Query 3114 AACAATCATCTCTGGAACCTGGTGAAGATCAAGTACCAACTCGTGCAGGTCCTGTTAGTG 3173
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 2991 AACAATCATCTCTTGAACCTGGTGACGATCAAGTACCAACTCGTGCAGGTCCTGTGAGTG 3050
Query 3174 TCGTCTTTTCCCGCAACATCACTTTCCACGAGTATCACGATGCTCCTGAAGATACAGCGG 3233
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 3051 TCGTCTTTTCCCGCAACATCACTTTTCACGAGTATCACGATGCTCCTGAAGATACAACCG 3110
Query 3234 AGTTATCTTGTTTGACATCTGACACATCCTCCTCTCCAGCAGAATCTCCCGAGTACACGA 3293
|||||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||
Sbjct 3111 AGTTATCTTGTTTGACGTCTGATACATCCTCTTCTCCAACAGAATCTCCCGAGTACACGA 3170
Query 3294 CACCTATGGTTGGTGAAGGCTCAAGGGCGGAATTCTTCCAAGAGGATATTTATGAGGAGC 3353
|||||||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct 3171 CACCTATGGTTGGTGAAGGCTCAAGGGCAGAGTTTTTCCAAGAGGATATTTATGAGGAGC 3230
Query 3354 TTGACGATGTGGTGCAGCGATTAGATCAGCTTACAGACTTGCATGCAATATCTGAAAGTC 3413
| ||| |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 3231 TAGACCATGTGGTGGAGCGATTAGAGCAGCTTACAGACTTGCATGCAATATCTCAAAGTC 3290
Query 3414 CTCCTGAAATTATCACTGAAGAGGCAGACGAGATAAAAGAGATTGATGAAGGATTGTTGT 3473
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3291 CTCCTGAAATTATCACCGAAGAGGCAGACGAGATAAAAGAGATTGATGAAGGATTGTTGT 3350
Query 3474 CTGAACTTGACTCGATTGGAGACTTCAGTGTTAAGGAA------A----T--TGAA---G 3518
||||||||||||||||||||||||||| |||||||||| | | |||| |
Sbjct 3351 CTGAACTTGACTCGATTGGAGACTTCAATGTTAAGGAAGTTGTGACAGATACTGAACCTG 3410
Query 3519 ----ATCT---A--GAAAATGCTATTAATCAGGCTGTTGTAGAGAGCATGGACAAGCAAC 3569
|||| | ||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct 3411 GGCCATCTTCGATAGAAAATGCTATGAACCAGGCTGTTGTAGAGAGCATGGAAAAGCAAC 3470
Query 3570 CAAAATCACCACAATCAGATGGTAGGCCTGGAGAAATCAAGTGTGTAGTTGGATCCGAAC 3629
|||| ||||||||||||||| ||||| |||||||||||| ||||| ||||| | || |||
Sbjct 3471 CAAAGTCACCACAATCAGATAGTAGGTCTGGAGAAATCATGTGTGCAGTTGAAACCAAAC 3530
Query 3630 CATCAGAGTCTTCAGTTGAAGAAAGTTCTATTGATGaaaaaaaCGTT 3676
|||| |||||||||||||| ||||||||||||||||||| |||||||
Sbjct 3531 CATCGGAGTCTTCAGTTGACGAAAGTTCTATTGATGAAACAAACGTT 3577
Score = 749 bits (405), Expect = 0.0
Identities = 608/699 (87%), Gaps = 42/699 (6%)
Strand=Plus/Plus
Query 3699 AAGAAGAAGAAGAAGAGGAAAGTAAACCAAAAGAGATAAC---ATCCGATGTTTTACCTG 3755
||| ||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct 3783 AAGGAGAAGAAGAGGAGGAAAGTAAACCAAAAGAGATAACAAAATCTGATGTTTTACTTG 3842
Query 3756 TCGAAACTCGATCACTGGAAGAATTCCCCAAACCTTCTGAACCAAAAGAGGGGATGTCAA 3815
||||||||||| ||||||||||||| |||||||||||||||| |||| | |||||| |||
Sbjct 3843 TCGAAACTCGAGCACTGGAAGAATTTCCCAAACCTTCTGAACTAAAAAAAGGGATGGCAA 3902
Query 3816 TGGAAGTAATCTCTGAAAGAGTGGTGATTCCCACAGAAGCAGCTGGTCCTAGTAATGTAA 3875
||||||||||||||||| ||||||| || |||||| |||| |||||||||||||||||||
Sbjct 3903 TGGAAGTAATCTCTGAAGGAGTGGTAATCCCCACAAAAGCTGCTGGTCCTAGTAATGTAA 3962
Query 3876 CATTAAGTGATGAAGTTGTGACCGAGGAAGCGAAAGCTGAGACCACCGCAAGCAACACTG 3935
|| |||||||||| |||||||| ||| |||| |||||||||||||| |||||||||||||
Sbjct 3963 CACTAAGTGATGAGGTTGTGACTGAGAAAGCAAAAGCTGAGACCACTGCAAGCAACACTG 4022
Query 3936 ATGTGAATGTCCAGAGTCCTGTGTCGAAAGAAAGTCCAGAGAACTCGAG-GGAAAAC-AT 3993
||| |||||||||||||||| ||| ||||||| ||||||||| ||| | || |||| ||
Sbjct 4023 ATGCAAATGTCCAGAGTCCTGAGTCCAAAGAAACTCCAGAGAATTCG-GTGG-AAACTAT 4080
Query 3994 TGCAGAGCAAAAAGGAAAGAAGGAGAAGAAAATGAAG---AA----T-AA----GA-CT- 4039
||||||||||||||||||| |||||||||| | |||| || | || || |
Sbjct 4081 TGCAGAGCAAAAAGGAAAGTAGGAGAAGAAGACGAAGTCCAACCCTTCAAGCTCGAGTTC 4140
Query 4040 AA-CTCAAGCTCTAGTTCCAGTGACTCAGATTGAAAAAATCAAAGGGTAAT--A-CATCT 4095
|| ||||||||||||||| |||||||||||||| ||||| |||||||||| | |||||
Sbjct 4141 AAGCTCAAGCTCTAGTTCGAGTGACTCAGATTG--AAAATTAAAGGGTAATACATCATCT 4198
Query 4096 CAAACTCAAGTAAATATATCTTTGTTAAATGTTAATGATAGGCACTTCTGGGTTTTGttt 4155
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
Sbjct 4199 CAAACTCAAGTAAATATATCTTTGTTAAAGGGTAATGATAGGCACTTCTGGGTTTTG--T 4256
Query 4156 tttttttCAATCAGACTGTGTCCTCTGTTATTAAAAGGTGCAAGAAG-AGGCCACTAATC 4214
|||||||| || |||||||||||||| |||||||| |||||||| | ||| ||||||
Sbjct 4257 TTTTTTTC-AT----CTGTGTCCTCTGTT-TTAAAAGGGGCAAGAAGTA-GCCGCTAATC 4309
Query 4215 ATACTTTTGTACCAAg-ttt-t-c-tcctttgtattggttttcttgtgtgtttgtgtttc 4270
||| |||| ||||||| ||| | | |||||||||||||||||||||||||||||||||||
Sbjct 4310 ATATTTTTATACCAAGTTTTCTCCTTCCTTTGTATTGGTTTTCTTGTGTGTTTGTGTTTC 4369
Query 4271 cttttctcctctttcttcagcttttcatatttattgatttgattgatttgtattttttga 4330
|||||||| ||||||||||||||| ||||||||| |||||||||||||||||| | ||||
Sbjct 4370 CTTTTCTCTTCTTTCTTCAGCTTT-CATATTTATCGATTTGATTGATTTGTATCTCTTGA 4428
Query 4331 aactattgaggttttttcagggttttggtttgagtcttt 4369
||| | |||||||| |||||||||||| ||| ||||||
Sbjct 4429 AACCAGAGAGGTTTTCTCAGGGTTTTGGATTGTGTCTTT 4467
Score = 106 bits (57), Expect = 2e-21
Identities = 63/66 (95%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 1783 GGCTTCTGACCATGATGAAGAAAAAAGCCATTCAGCTTCTGACCATGATGAAGAAAAAAG 1842
|||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1816 GGCTTCTGACCACGATGAAGAAAATAGTCATTCAGCTTCTGACCATGATGAAGAAAAAAG 1875
Query 1843 CCATTC 1848
||||||
Sbjct 1876 CCATTC 1881
Score = 60.2 bits (32), Expect = 2e-07
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 1784 GCTTCTGACCATGATGAAGAAAAAAGCCATTC 1815
||||||||||||||||||||||||||||||||
Sbjct 1850 GCTTCTGACCATGATGAAGAAAAAAGCCATTC 1881
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 219430208682
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5