BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473765 Length=633 Score E Sequences producing significant alignments: (Bits) Value AT1G43610.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 776 0.0 AT1G43600.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 774 0.0 > AT1G43610.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr1:16424578-16425345 FORWARD LENGTH=768 Length=768 Score = 776 bits (420), Expect = 0.0 Identities = 549/610 (90%), Gaps = 13/610 (2%) Strand=Plus/Plus Query 3 GAAGAAGAAGCTTCACCTAGTCCTTGACTTGGACCACACGCTAATCCACACGGTTCTTGT 62 |||||||||||||||| ||||||||||||| |||||||||||| ||||| | ||||| || Sbjct 147 GAAGAAGAAGCTTCACTTAGTCCTTGACTTAGACCACACGCTACTCCACTCTGTTCTGGT 206 Query 63 TTCGGACCTTTCTGAACGCGAGAAGTATCTACTGGAAGAAGCTGATTCAAGGCAAGATCT 122 ||| ||||| || ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 207 TTCAGACCTATCCAAACGCGAGAAGTATCTACTCGAAGAAACTGATTCAAGGCAAGATCT 266 Query 123 ATGGAGATTCAACAAAGACAGTCCCTACGAATTTATCATAAAGCTACGACCTTTTGTTCA 182 ||||||| |||| |||| || |||||||||||||||||||||||||||||| |||| Sbjct 267 ATGGAGACGCAACGTAGACGGT---TACGAATTTATCATAAAGCTACGACCTTTTCTTCA 323 Query 183 TGAATTTCTCTTAGAAGCTAACAAGCTATTCACAATGCACGTTTACACAATGGGTAATTC 242 ||| |||||||||||||| || ||||| |||||||||||||||||||||||||||| || Sbjct 324 TGAGTTTCTCTTAGAAGCCAATAAGCTCTTCACAATGCACGTTTACACAATGGGTAGTT- 382 Query 243 CT-GTTACGCTCAGGATGTGTTGAAGTTGATTGATCCGGATAAAGTATACTTT-GGAAAT 300 || ||||||| || | ||||||||| |||||||||| ||||||||||||||| ||||| Sbjct 383 CTAGTTACGCAAAGCAGGTGTTGAAGCTGATTGATCCTGATAAAGTATACTTTGGGAAA- 441 Query 301 CGAGTTATAACCAGAGAAGCAAGTCCTTGTAATAAGACACTTGATCTTCTTGTGGCTGAT 360 ||||||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct 442 CGAGTTATAACTAGAGAAGCAAGTCCTTTTAATAAGTCACTTGATCTTCTTGCGGCTGAT 501 Query 361 ACACGTAGAGTGGTAATTGTGGATGATACGATTTC-TGTTTGGCCTCATCACAAGAGAAA 419 | |||||||||||| ||||||||||||||| ||| |||||||||| |||||||||||| Sbjct 502 AAACGTAGAGTGGTCATTGTGGATGATACG-GTTCATGTTTGGCCTTTTCACAAGAGAAA 560 Query 420 CTTGTTGCAGATCACCAAATACATCTATTTTAGAGTCGATGGTACCAAGTGGGATTCGTA 479 |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||| Sbjct 561 CTTGTTGCAGATCACCAAATACATTTATTTTAAAGTCGATGGAACCAAGTGGGATTCGTA 620 Query 480 CGCAGAAG-AGAAGAAAGACGAGAGTCGAAAG-AGTGGATCATTGGCGAATGTTCTGAAG 537 |||||||| | |||||||| ||||||| |||| | |||||||||||| ||||||||||| Sbjct 621 CGCAGAAGCA-AAGAAAGATGAGAGTC-AAAGCAATGGATCATTGGCCAATGTTCTGAAA 678 Query 538 TTCCTTGAAGATGTTCACAAAAGATTTGAAGAGGATTTAGATTCTAAAGATTTGAGGCTA 597 |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 679 TTCCTTGAAGTTGTTCACAAAAGATTTGAAGAGGATTTAGGTTTTAAAGATTTGAGGCTA 738 Query 598 TTGATACCTT 607 |||||||||| Sbjct 739 TTGATACCTT 748 > AT1G43600.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr1:16415357-16416022 FORWARD LENGTH=666 Length=666 Score = 774 bits (419), Expect = 0.0 Identities = 567/636 (89%), Gaps = 19/636 (3%) Strand=Plus/Plus Query 3 GAAGAAGAAGCTTCACCTAGTCCTTGACTTGGACCACACGCTAATCCACACGGTTCTTGT 62 ||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||| || Sbjct 45 GAAGAAGAAGCTTCATTTAGTCCTTGACTTGGACCACACGCTACTCCACTCTGTTCTGGT 104 Query 63 TTCGGACCTTTCTGAACGCGAGAAGTATCTACTGGAAGAAGCTGATTCAAGGCAAGATCT 122 ||| ||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 105 TTCAGACCTATCTAAACGCGAGAAGTATCTACTCGAAGAAACTGATTCAAGGCAAGATCT 164 Query 123 ATGGAGATTCAACAAAGACAGTCCCTACGAATTTATCATAAAGCTACGACCTTTTGTTCA 182 ||||||| |||| |||| || ||||| |||||||||||||||||||||||| |||| Sbjct 165 ATGGAGACGCAACGTAGACGGT---TACGAGTTTATCATAAAGCTACGACCTTTTCTTCA 221 Query 183 TGAATTTCTCTTAGAAGCTAACAAGCTATTCACAATGCACGTTTACACAATGGGTAATTC 242 ||| |||||||||||||| || ||||| |||||||||||||||||||||||||||| || Sbjct 222 TGAGTTTCTCTTAGAAGCCAATAAGCTCTTCACAATGCACGTTTACACAATGGGTAGTT- 280 Query 243 CT-GTTACGCTCAGGATGTGTTGAAGTTGATTGATCCGGATAAAGTATACTTT-GGAAAT 300 || ||||||| || | ||||||||| |||||||||| ||||||||||||||| ||||| Sbjct 281 CTAGTTACGCAAAGCAGGTGTTGAAGCTGATTGATCCTGATAAAGTATACTTTGGGAAA- 339 Query 301 CGAGTTATAACCAGAGAAGCAAGTCCTTGTAATAAGACACTTGATCTTCTTGTGGCTGAT 360 ||||||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct 340 CGAGTTATAACTAGAGAAGCAAGTCCTTTTAATAAGTCACTTGATCTTCTTGCGGCTGAT 399 Query 361 ACACGTAGAGTGGTAATTGTGGATGATACGATTTC-TGTTTGGCCTCATCACAAGAGAAA 419 | |||||||||||| ||||||||||||||| ||| |||||||||| ||| |||||||| Sbjct 400 AAACGTAGAGTGGTGATTGTGGATGATACG-GTTCATGTTTGGCCTTTTCATAAGAGAAA 458 Query 420 CTTGTTGCAGATCACCAAATACATCTATTTTAGAGTCGATGGTACCAAGTGGGATTCGTA 479 |||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||| Sbjct 459 CTTGTTGCAGATCACCAAATACGTTTATTTTAAAGTCGATGGAACCAAGTGGGATTCGTA 518 Query 480 CGCAGAAG-AGAAGAAAGACGAGAGTCGAAAG-AGTGGATCATTGGCGAATGTTCTGAAG 537 |||||||| | |||||||| ||||||| |||| | |||||||||||| ||||||||||| Sbjct 519 CGCAGAAGCA-AAGAAAGATGAGAGTC-AAAGCAATGGATCATTGGCTAATGTTCTGAAA 576 Query 538 TTCCTTGAAGATGTTCACAAAAGATTTGAAGAGGATTTAGATTCTAAAGATTTGAGGCTA 597 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 577 TTCCTTGAAGATGTTCACAAAAGATTTGAAGAGGATTTAGGTTTTAAAGATTTGAGGCTA 636 Query 598 TTGATACCTTATCCTTGTAGACAATGCTGCTTCTGA 633 |||||||||| ||||||||||||||| |||| Sbjct 637 TTGATACCTT------GTAGACAATGCTGCTACTGA 666 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30542361376 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5