BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473768
Length=2442
Score E
Sequences producing significant alignments: (Bits) Value
AT1G43620.1 | Symbols: TT15, UGT80B1 | UDP-Glycosyltransferase ... 3557 0.0
> AT1G43620.1 | Symbols: TT15, UGT80B1 | UDP-Glycosyltransferase
superfamily protein | chr1:16425412-16430200 REVERSE LENGTH=2516
Length=2516
Score = 3557 bits (1926), Expect = 0.0
Identities = 2313/2488 (93%), Gaps = 74/2488 (3%)
Strand=Plus/Plus
Query 1 ATTATTAATAAATATCTCATCGGCGGTCTCACCACATTTGGTTGATTCAACAGTCTCCAA 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2 ATTATTAATAAATATCTCATCGGCGGTCTCACCACATTTGGTTGATTCAAAAGTCTCCAA 61
Query 61 ACCCTTTGGAATCTTCTCAAGTTTTTCTTCATCAATT-C-C--A--C----A-AATCTTT 109
||||||||||||| | ||||||| ||||||||||||| | | | | | |||||||
Sbjct 62 ACCCTTTGGAATC-T-TCAAGTTGTTCTTCATCAATTCCACAAACCCAGAAACAATCTTT 119
Query 110 GCTTCCACAGAGAT-----A-T--TC----TCTCT--TTTTCCAATTCTTGAACTCAGTG 155
||||||||||||| | | || ||||| ||||||||||| ||||||||
Sbjct 120 -CTTCCACAGAGATAACCCACTAATCAATTTCTCTCCTTTTCCAATTC----ACTCAGTG 174
Query 156 CAGCTAACTTTCTGCACCTAAAGGA-TTGACTGGTCGTTGCTTCAAGCTTTGATTCGTCT 214
|||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct 175 CAGCTAACTTTCTGTACCT-AAGGATTTGACTGGTTGTTGCTTCAAGCTTTGATTCGTCT 233
Query 215 GTGTTCAGCATTTGCCAGGAGAGCCATTAGCATCTCTA----TG-----A--T-T--GAA 260
|||| ||||||||||||||||||||||||||||| ||| || | | | |||
Sbjct 234 GTGTACAGCATTTGCCAGGAGAGCCATTAGCATCACTATGGTTGAATAAATGTATAAGAA 293
Query 261 TAGTGAAATTCTTGTGAGTGTGTATGGATGTTCCTTTGTGGAGTTTGATCCATATGTAGG 320
||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 294 TAGTGAAATTCTT-TGAGTGTGTATAGATGTTCTTTTGTGGAGTTTGATCCATATGTAGG 352
Query 321 TGGTTTGTTGCTGCAGCTGATTGTGTGGGTATTAGGCAGTGAGAGCTGTTTAGTT--ATG 378
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 353 TGGTTTGTTGCTGCAGCTGATTGTGTGGGT-TTAGGCAGTGAGAGCTGTTTAGTTGAAT- 410
Query 379 GCGAG-TAATATATTTGATCATCCACTACAAAAATTAGAGGATGGGATCGGGTCTCGAAA 437
| || | || | |||| | | || | ||| ||| ||| | || ||
Sbjct 411 TC-AGTTTTTAAAGGTGAT-GGCTAGTA-ATGTATT---TGAT--CATCCACT-TC--AA 459
Query 438 GGATGATTCTGATGAAGATAACGCTGTAAATAGCGAGAAGGCGAGTTTATTGGAAACATC 497
| || | | ||||||||| | |||||| |||||||| ||||||||||||||||||||
Sbjct 460 GAATTA-GAGGGTGAAGATAATGGTGTAAAGAGCGAGAAAGCGAGTTTATTGGAAACATC 518
Query 498 TGGTTCTGTAGATACTACTCCTGAAGATTCTGGTTGTCGTTCTTCTGATTGGCGTAGGGG 557
|||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||
Sbjct 519 TGGTTCTGTAGATACTACTCCTGAGGATTCTGGTCATCGTTCTTCTGATGGGCATAGGGG 578
Query 558 ACTAGACCACTGTGAAACTGCACCTGTTGGTCTCTGTGAAGATATGCTTATCGATGACAG 617
||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||
Sbjct 579 ACTAGACCACTGTGAAACTGCACCTGTTGGTCTCTATGGAGATATGCTTATCAATGACAG 638
Query 618 TGAGATTCAGTACTCTCGGTCCTTGACAGAGAAAGGGTCTCCTGCAAATCATAATCTAAA 677
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||
Sbjct 639 TGAGATTCAGTACTCTCGGTCCTTGACAGAGAAAGGGTCTCCTGCGATTCATAATCTTAA 698
Query 678 ATTGGATAGATTATCGGAGCGGGAAAAGCAAAAACTCATTGTCGAGTTAGTCAGAATACA 737
||| |||||||| ||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct 699 ATTAGATAGATTGTCGGAGCAAGAAAAGCAAAAACTCATTGTTGAGCTAGTCAGAATACA 758
Query 738 AAATGACGGGACAGTGGAAGTTATAGATAACGGAACTCCGGTATCGGAGTTATGGGAGTT 797
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 759 AAATGACGGGACAGTGGAAGTTATAGATAACGGTACTCCGGTGTCGGAGTTATGGGAGTT 818
Query 798 TGAGCCAACGAAAGGGCAGTCCACAATCACATATGAAATGTCCTTTACTGAGTCCTTTAG 857
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 819 TGAGCCAACGAAAGGGCAGTCCACAATCACATATGAAAAGTCCTTAACTGAGTCCTTTAG 878
Query 858 ATCCATTCCAAGGTTAAAAATTGCTATACTTGTCGTTGGAACTAGAGGTGATGTGCAGCC 917
||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||
Sbjct 879 ATCCATTCCAAGGTTAAAAATTGCTATACTTGTGGTTGGAACTCGAGGCGATGTGCAGCC 938
Query 918 TTTTTTGGCCATGGCAAAGCGCCTCCAGGAATTTGGTCATCGTGTTAGGTTGGCAACTCA 977
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 939 TTTTCTGGCCATGGCAAAGCGCCTCCAGGAGTTTGGTCATCGTGTTAGGTTGGCAACTCA 998
Query 978 TGCAAATTTCCGCTCTTTTGTACGGGCTGCTGGAGTAGAGTTTTATCCCTTGGGTGGTGA 1037
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 999 TGCAAATTTCCGCTCTTTTGTACGGGCTGCTGGAGTAGAGTTTTATCCCTTGGGCGGTGA 1058
Query 1038 TCCCCGAGAGTTAGCTGCATATATGGCTAGAAATAAAGGTCTCATTCCTTCTGGGCCTTC 1097
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1059 TCCCCGAGAGTTAGCTGCCTATATGGCTAGAAATAAAGGTCTCATTCCCTCTGGGCCTTC 1118
Query 1098 AGAAATATCAAAACAGAGAAAACAGTTGAAGGCAATTATAGAGTCTCTTCTTCCGGCATG 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 AGAAATATCAAAACAGAGAAAACAGTTGAAGGCAATTATAGAGTCTCTTCTTCCGGCATG 1178
Query 1158 CATAGAGCCTGATATGGAAACTGCTACCTCTTTCAGAGCTCAAGCGATAATTGCAAATCC 1217
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1179 CATAGAGCCTGATTTGGAAACTGCTACGTCTTTCAGAGCTCAAGCGATAATTGCAAATCC 1238
Query 1218 TCCTGCCTATGGACATGTGCATGTTGCCGAAGCTCTTGGAGTACCAATTCACAttttttt 1277
|||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1239 TCCTGCATATGGACATGTGCATGTTGCTGAAGCTCTTGGAGTACCAATTCATATTTTTTT 1298
Query 1278 CACAATGCCTTGGACGCCAACCCATGAATTTCCACACCCTTTGGCACGTGTTCCTCAAAG 1337
|||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||
Sbjct 1299 CACAATGCCTTGGACGCCAACCAATGAATTTCCCCACCCGTTGGCGCGTGTTCCTCAAAG 1358
Query 1338 TGCTGCGTATTGGCTATCGTATATAGTTGTTGATCTGATGGTATGGTGGAGCATAAGGAC 1397
|||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1359 TGCTGCATATTGGCTGTCATATATAGTTGTTGATCTGATGGTATGGTGGAGCATAAGGAC 1418
Query 1398 ATATATAAATGATTTTAGGAAGAGGAAGCTAAACCTTGCACCTATCGCATATTTTAGCAC 1457
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1419 ATATATAAATGATTTTAGGAAGAGAAAGCTAAACCTTGCACCTATCGCATATTTTAGCAC 1478
Query 1458 ATACCATGGCTCAATTTCGCACTTGCCTACTGGTTACATGTGGAGTCCCCATGTTGTGCC 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479 ATACCATGGCTCAATTTCGCACTTGCCTACTGGTTACATGTGGAGTCCCCATGTTGTGCC 1538
Query 1518 AAAACCAAGTGATTGGGGTCCTTTAGTTGATGTTGTTGGCTATTGTTTCCTGAACCTTGG 1577
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1539 AAAACCAAGTGATTGGGGTCCTTTAGTTGATGTTGTTGGCTACTGTTTCCTGAACCTTGG 1598
Query 1578 ATCAAAGTACCAGCCTCGCGAAGAGTTTCTCCACTGGATAGAAAGAGGATCACCGCCCAT 1637
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1599 ATCGAAGTACCAGCCTCGCGAAGAGTTTCTCCACTGGATAGAAAGAGGATCACCGCCCGT 1658
Query 1638 ATATATTGGTTTTGGAAGCATGCCTCTTGATGATCCAAAGA-AAACAATGGACATTATAT 1696
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1659 ATATATTGGTTTTGGAAGCATGCCTCTTGATGATCCAAA-ACAAACAATGGACATTATAC 1717
Query 1697 TGGAAACACTGAGAGATACAGAACAGAGAGGGATAGTTGATCGAGGTTGGGGTGGCCTTG 1756
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1718 TGGAAACATTGAAAGATACAGAACAGAGAGGGATAGTTGATCGAGGTTGGGGTGGCCTTG 1777
Query 1757 GAAACCTTGCTACTGAAGTTCCTGAAAATGTATTCTTAGTGGAGGACTGTCCTCACGATT 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1778 GAAACCTTGCTACTGAAGTTCCTGAAAATGTATTCTTAGTGGAGGACTGTCCTCACGATT 1837
Query 1817 GGTTGTTTCCTCAGTGTTCAGCTGTGGTTCATCATGGCGGTGCTGGAACCACAGCGACTG 1876
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 GGTTGTTTCCTCAATGTTCAGCTGTGGTTCATCATGGCGGTGCTGGAACCACAGCGACTG 1897
Query 1877 GACTAAAAGCTGGGTGTCCAACAACGATCGTGCCATTCTTTGGGGATCAATTCTTCTGGG 1936
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1898 GACTAAAAGCTGGGTGTCCAACAACGATCGTGCCATTCTTTGGGGATCAGTTCTTCTGGG 1957
Query 1937 GTGACAGGATCTATGAGAAAGGACTTGGTCCTGCGCCAATACCGATAGCTCAGCTCAGTG 1996
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1958 GTGACAGGATCTATGAGAAAGGACTTGGGCCTGCGCCAATACCGATAGCTCAGCTCAGTG 2017
Query 1997 TTGAGAACCTCAGTAGTTCCATAAGATTCATGCTACAACCAGAGGTAAAATCACAAGTGA 2056
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2018 TTGAGAACCTCAGTAGCTCCATAAGATTCATGCTACAACCAGAGGTGAAATCACAAGTGA 2077
Query 2057 TGGAACTAGCGAAAGTACTGGAGAACGAGGATGGTGTAGCTGCAGCAGTTAATGCATTCC 2116
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2078 TGGAGCTAGCGAAAGTACTGGAGAACGAGGATGGTGTAGCTGCAGCAGTTGATGCATTCC 2137
Query 2117 ACAGGCATTTGCCACCAGAGCTGCCACTGCCCGAGTCCTCGTCTGAGAAAAAGGATGAAG 2176
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 2138 ACAGGCATTTGCCACCAGAGCTGCCACTGCCCGAGTCCTCGTCCGAGAAAAAAGATGAAG 2197
Query 2177 ATGATCGACCAGACCTGTTACAGTGGTTCTTTATTCAGATTGGCAAGAAGTGTTGCCTTC 2236
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2198 ATGATCGACCAGACCTGTTACAGTGGTTCTTTATTCAGATTGGCAAGAAGTGTTGTCTTC 2257
Query 2237 CATGTGGTGGCGTGTGATATCAAATTTCCTTAGTTGTGT-TTTAAGTTGCATAATCTTTG 2295
|||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||
Sbjct 2258 CATGTGGTGGCGTGTGATATCAAAGTTCCTTAGTCGTGTGTTTAAGTTGCATAATCTATG 2317
Query 2296 TCTCTGCAACTCAATTCATTTCATTCAATGGTCAGGAATATGATGATTAGATTTCTTTTG 2355
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 2318 TCTCTGCAACTCAATTCATTTCATTCAATGGTCAGGAATAT-A--ATTAGATTTCTTTTG 2374
Query 2356 CACAGTTGCATAAAGTGGATTTAATAAAATTATTGTGT-TGGGTTTGTTCATCCTTATAA 2414
|||||||||||||| ||||| ||||||||||||||| | |||||||||||||| ||||||
Sbjct 2375 CACAGTTGCATAAAATGGATGTAATAAAATTATTGT-TATGGGTTTGTTCATCTTTATAA 2433
Query 2415 GTTTGTGGTCCAATGAGAATGAGTTTGA 2442
|||||||||||||||||||||| |||||
Sbjct 2434 GTTTGTGGTCCAATGAGAATGACTTTGA 2461
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121284516720
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5