BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473806
Length=1570
Score E
Sequences producing significant alignments: (Bits) Value
AT1G44180.1 | Symbols: | Peptidase M20/M25/M40 family protein ... 1855 0.0
AT1G44820.1 | Symbols: | Peptidase M20/M25/M40 family protein ... 1541 0.0
> AT1G44180.1 | Symbols: | Peptidase M20/M25/M40 family protein
| chr1:16807953-16810413 REVERSE LENGTH=1594
Length=1594
Score = 1855 bits (1004), Expect = 0.0
Identities = 1206/1304 (92%), Gaps = 11/1304 (1%)
Strand=Plus/Plus
Query 1 ATGGCGGTGtctcctcttctctggactctcttcctcttctcggttatcttctcGATCCAA 60
||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1 ATGGCGGTGTCTCTTCTTCTCTGGACTCTCTTCCTCTTCTCATTTATCTTCTCCCTCCAA 60
Query 61 TCATACAG---TGAAGAAGAAGAAGATACACCGATCACGCGGTTCCAGCAATACTTAAGA 117
||| |||| |||||||||||||| ||||| ||||| || ||||||||||||||||||
Sbjct 61 TCACACAGCAAAGAAGAAGAAGAAGACACACCAATCACACGATTCCAGCAATACTTAAGA 120
Query 118 TTCAACACCGCTCATCCAAACCCTAACTACACAGCACCAATCTCTTTTCTTCTTGATCAA 177
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 121 TTCAACACCGCTCATCCAAACCCTAACTACACCGCACCAATCTCTTTTCTTCTTGATCAA 180
Query 178 GCTAGATCCATTGGTCTCACTTCTCGAACCATCGAGTTTGTTCATGGTAAGCCAGTTCTT 237
|| ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 181 GCAAGATCAATTGGTCTTACTTCTCGAACCATCGAGTTTGTTCCTGGTAAGCCAGTTCTT 240
Query 238 CTCCTCACATGGCTAGGCTCAAACCTTAACCTTCCTTCAATTCTCTTCAACTCTCATCTC 297
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 241 CTCCTCACATGGCTAGGCTCAAACCTTAACCTTTCTTCAATTCTCTTCAACTCTCATCTC 300
Query 298 GATTCTGTTCCCGCGGAATCCGAGAAATGGATACATCCACCGTTCTCAGCTCAGAGAA-C 356
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |
Sbjct 301 GATTCTGTTCCCGCGGAATCCGAGAAGTGGATACATCCACCATTCTCAGCTCACCGAACC 360
Query 357 AGTGGATGGTCATATCTACGCTCGTGGCGCGCAAGATGACAAGTGTATTGGAGTTCAGTA 416
| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 361 A-TCGATGGTCATATCTACGCTCGCGGCGCGCAAGATGACAAGTGTATAGGAGTTCAGTA 419
Query 417 TCTAGAAGCAATCAGGAACTTGAAATCAAGAGGCTTCGT-TCCTCTTCGTACGATCCATA 475
||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||
Sbjct 420 TCTAGAAGCAATCAGGAACTTGAAATCAAGAAGCTTC-TCTCCTCTTCGTACGATCCATA 478
Query 476 TCTCTTACGTTCCTGAAGAAGAGATCGGTGGATTCGATGGGATGATGAAATTTGCGGCGT 535
|||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 479 TCTCTTACGTACCTGAAGAAGAGATCGGTGGATTCGGTGGGATGATGAAATTCGCGGCGT 538
Query 536 CTTTGGAGTTTAGGGAGTTGAATTTGGGATTTGTTATGGATGAAGGACAAGCGAGTCCGG 595
||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 539 CTTCGGAGTTTAAAGATTTGAATTTGGGATTTGTTATGGATGAAGGACAAGCGAGTCCCG 598
Query 596 GAGATGAGTTTAGGGTGTTTTACGCTGAACGGACTCCATGGCATCTCGTTATTCGAGCTG 655
|||||||||| |||||||||||||||||||| ||||| |||||||||| ||| ||||||
Sbjct 599 GAGATGAGTTCAGGGTGTTTTACGCTGAACGAACTCCTTGGCATCTCGCTATCCGAGCTA 658
Query 656 AGGGGATTCCAGGGCATGGAGCTAAGCTTTATGATAATTCAGCTATGGAGAATTTGATGA 715
| || || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 659 ATGGTATGCCAGGTCATGGTGCTAAGCTTTATGATAATTCAGCTATGGAGAATTTGATGA 718
Query 716 AGAGTGTTGAGTTGATCTCTAAGTTTAGGGAGACGCAATTTGATTTGGTCAAGGCGGGGA 775
|||||||||||||||| |||| |||||| ||| | || |||||||| || || || || |
Sbjct 719 AGAGTGTTGAGTTGATTTCTAGGTTTAGAGAGTCACAGTTTGATTTTGTTAAAGCTGGTA 778
Query 776 AAGCTGCGAATTCGGAGGTTATCTCTGTTAATCCAGCTTATCTTAAAGCTGGAACTCCCT 835
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 779 AAGCTGCGAATTCGGAGGTTATCTCTGTGAATCCAGTTTATCTTAAAGCTGGAACTCCCT 838
Query 836 CCACTACCGGATTTGTGATGAATATGCAACCTTCAGAGGCAGAAGTTGGGTATGATATAA 895
||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||
Sbjct 839 CCACTACTGGATTTGTGATGAACATGCAACCTTCAGAAGCAGAAGTTGGGTATGATCTAA 898
Query 896 GGTTGCCTCCAATGGCAGATCCTGATGCAATGAAGAAAAGGATTGCTGAGGAATGGGCTC 955
| |||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct 899 GATTGCCTCCAATGGCAGATCCAGTTGCTTTGAAGAAAAGGATTGCTGAGGAATGGGCTC 958
Query 956 CTTCTATTAGGAACATGACCTACACGATAGAAGAGA-AAGGAAAGTTAGCAGATCAGTTA 1014
|||||||||||||||||||||||||| || || | | ||||||||||| |||| || |||
Sbjct 959 CTTCTATTAGGAACATGACCTACACGCTAAAACA-ACAAGGAAAGTTAACAGACCATTTA 1017
Query 1015 GGGCGACCGATAATGACT-CTAACAAATGGTTCTAATCCTTGGTGGTCTATCTTCAAGCA 1073
|||||||| ||||||||| | |||||||| | | ||||||||||||||||||||||||||
Sbjct 1018 GGGCGACCTATAATGACTAC-AACAAATGATACCAATCCTTGGTGGTCTATCTTCAAGCA 1076
Query 1074 AGCTATTGAAGCAACTGGAGGAAAACTTGCAAAACCTGAAATTTTGATTTCAAGTACAGA 1133
|||| |||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||
Sbjct 1077 AGCTGTTGAAGCAACTGGAGGAAAACTCGCAAAGCCTGAAATATTGATTTCAACTACAGA 1136
Query 1134 TTCACGCTTTATTCGCACTTTAGGAATTCCAGTTCTAGGTTTCTCTCCAATGATCAATAC 1193
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1137 TTCACGCTTTATTCGCACTTTAGGAATACCAGTTCTAGGTTTCTCTCCAATGATCAATAC 1196
Query 1194 TCCTATCTTAGTGCATGATCATAACGAGTTTCTTAAAGATACAGTGTTCATGAAAGGAAT 1253
||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1197 ACCTATTTTAGTGCATGACCATAACGAGTTCCTTAAAGATACCGTGTTCATGAAAGGAAT 1256
Query 1254 AGGAGTATATGAATCAGTTATCAGCGCTCTAAGTTCCTTTGAGG 1297
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 AGGAGTATATGAATCAGTTATCAGCGCTCTAAGTTCCTTTGAGG 1300
> AT1G44820.1 | Symbols: | Peptidase M20/M25/M40 family protein
| chr1:16926324-16928704 FORWARD LENGTH=1694
Length=1694
Score = 1541 bits (834), Expect = 0.0
Identities = 1338/1573 (85%), Gaps = 68/1573 (4%)
Strand=Plus/Plus
Query 1 ATGGCGGTGtctcctcttctctggactctct-tcctcttctcggttatcttctcGA-TCC 58
|||||| | |||||||||||||||||||| | || ||||||| | |||||||| | |||
Sbjct 28 ATGGCGATATCTCCTCTTCTCTGGACTCT-TATCATCTTCTCCATAATCTTCTC-ACTCC 85
Query 59 AATCATACAGTGAAGAAGAAGAAGATACACCGATCACGCGGTTCCAGCAATACTTAAGAT 118
|||| | | | |||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct 86 AATCCT-C-CT-CCTCCGAAGAAGACACACCAATCACACGATTCCAACAATACTTAAGAT 142
Query 119 TCAACACCGCTCATCCAAACCCTAACTACACAGCACCAATCTCTTTTCTTC-TTGATCAA 177
||||||| ||||||||||||||||||||||| ||||||||||| ||| || || | |||
Sbjct 143 TCAACACAGCTCATCCAAACCCTAACTACACCGCACCAATCTC-CTTCCTCATTAACCAA 201
Query 178 GCT-AGATCCATTGGTCTCACTTCTC-GAACCATCGAGTTTGT-TCATGGTAAGCCAGTT 234
||| | ||| || ||||||||| | | ||| ||||| || | || ||| || ||| ||
Sbjct 202 GCTCA-ATCAATCGGTCTCACTAC-CAAAACAATCGAATTCATCTC-TGGCAAACCAATT 258
Query 235 CTTCTCCTCACATGGCTAGGCTCAAACCTTAACCTTCCTTCAATTCTCTTCAACTCTCAT 294
|||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct 259 CTTCTCATCACATGGCTAGGCTCAAACCCTAACCTCCCATCAATTCTCTTCAACTCTCAT 318
Query 295 CTCGATTCTGTTCCCGCGGAATCCGAGAAATGGATACATCCACCGTTCTCAGCTCAGAGA 354
|||||||| || ||||| ||||| |||||||||| | ||||||||||||||||||| | |
Sbjct 319 CTCGATTCAGTCCCCGCCGAATCAGAGAAATGGACATATCCACCGTTCTCAGCTCACAAA 378
Query 355 A-CAGTGGATGGTCATATCTACGCTCGTGGCGCGCAAGATGACAAGTGTATTGGAGTTCA 413
| || | || || || ||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct 379 ACCA-TCGACGGCCACATCTACGCTCGAGGAGCGCAAGACGACAAGTGTATCGGAGTTCA 437
Query 414 GTATCTAGAAGCAATCAGGAACTTGAAATCAAGAGGCTTCGT-TCCTCTTCGTACGATCC 472
||||||||| ||||||| ||||||||||| ||||||||| | ||||| |||||||| |
Sbjct 438 ATATCTAGAATCAATCAGAAACTTGAAATCGAGAGGCTTC-TCACCTCTCCGTACGATTC 496
Query 473 ATATCTCTTACGTTCCTGAAGAAGAGATCGGTGGATTCGATGGGATGATGAAATTTGCGG 532
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 497 ATATCTCTTACGTTCCTGAAGAAGAGATCGGTGGATTCGACGGGATGATGAAATTCGCGG 556
Query 533 CGTCTTTGGAGTTTAGGGAGTTGAATTTGGGATTTGTTATGGATGAAGGACAAGCGAGTC 592
|||| | |||||||| ||| |||||||||||||||| |||||||||||||||||| | ||
Sbjct 557 CGTCATCGGAGTTTAAGGATTTGAATTTGGGATTTGCTATGGATGAAGGACAAGCTAATC 616
Query 593 CGGGAGATGAGTTTAGGGTGTTTTACGCTGAACGGACT-CCATGGCATCTCGTTATTCGA 651
| || ||||| |||||||| ||||||||||| || | | ||||||||| | |||||| |
Sbjct 617 CTGGCGATGAATTTAGGGTTTTTTACGCTGATCG-AGTTCCATGGCATTTTGTTATTAAA 675
Query 652 GCTGAGGGGATTCCAGGGCATGGAGCTAAGCTTTATGATAATTCAGCTATGGAGAATTTG 711
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 676 GCTGAGGGGATTCCAGGTCATGGCGCTAAGCTTTATGATAATTCAGCTATGGAGAATTTG 735
Query 712 ATGAAGAGTGTTGAGTTGATCTCTAAGTTTAGGGAGACGCAATTTGATTTGGTCAAGGCG 771
|||||||||||||||||||| |||| |||||| ||| | || |||||||| || || ||
Sbjct 736 ATGAAGAGTGTTGAGTTGATTTCTAGGTTTAGAGAGTCACAGTTTGATTTTGTTAAAGCT 795
Query 772 GGGAAAGCTGCGAATTCGGAGGTTATCTCTGTTAATCCAGCTTATCTTAAAGCTGGAACT 831
|| ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 796 GGTAAAGCTGCGTATTCGGAGGTTATCTCTGTGAATCCAGTTTATCTTAAAGCTGGAACT 855
Query 832 CCCTCC-ACTACCGGATTTGTGATGAATATGCAACCTTCAGAGGCAGAAGTTGGGTATGA 890
|| | | ||||| || ||||||||||||||||| |||||||| ||||||| |||||||||
Sbjct 856 CC-TACTACTACTGGGTTTGTGATGAATATGCAGCCTTCAGAAGCAGAAGCTGGGTATGA 914
Query 891 TATAAGGTTGCCTCCAATGGCAGATCCTGATGCAATGAAGAAAAGGATTGCTGAGGAATG 950
| |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 915 TTTAAGGTTGCCTCCAATGGCAGATCCTGATGTTATGAAGAAAAGAATTGCTGAAGAATG 974
Query 951 GGCTCCTTCTATTAGGAACATGACCTACACGATAGAAGAGAAAGGAAAGTTA-GCAGATC 1009
|||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||
Sbjct 975 GGCTCCTTCTATTAGGAACATGACCTACTCGATACAAGAGAAAGGAAAGTTAAG-AGATC 1033
Query 1010 AGTTAGGGCGACCGATAATGACTCTAACAAATGGTTCTAATCCTTGGTGGTCTATCTTCA 1069
| ||||||||||| |||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct 1034 ATTTAGGGCGACCTATAATGACTCCAGTAAATGATTCTAATCCTTGGTGGTCTATCTTCA 1093
Query 1070 AGCAAGCTATTGAAGCAACTGG-AGGAAAACTTGCAAAACCTGAAATTTTGATTTCAAGT 1128
|||||||| ||||||||| ||| ||||||||| ||||| |||||||||||| ||||| |
Sbjct 1094 AGCAAGCTGTTGAAGCAA-TGGGAGGAAAACTCGCAAAGCCTGAAATTTTGGCTTCAACT 1152
Query 1129 ACAGATTCACGCTTTATTCGCACTTTAGGAATTCCAG-TTCTAGGTTTCTCTCCAATGAT 1187
|||||||||||||||||||||||||| ||||||||| || | |||| |||||||||||
Sbjct 1153 ACAGATTCACGCTTTATTCGCACTTTGGGAATTCCAACTTTTGGGTT-CTCTCCAATGAC 1211
Query 1188 CAATACTCCTATCTTAGTGCATGATCATAACGAGTTTCTTAAAG-ATACAGTGTTCATGA 1246
|||||| ||||| ||| ||||||| ||||||||||| || |||| |||| || |||||||
Sbjct 1212 CAATACGCCTATTTTATTGCATGACCATAACGAGTTCCT-AAAGGATACTGTATTCATGA 1270
Query 1247 AAGGAATAGGAGTATATGAATCAGTTATCAGCGCTCTAAGTTCCTTTGAGGGA-ATATCT 1305
||||||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 1271 AAGGAATAGAAGTATATGAATCGGTTATCAGCGCTCTAAGTTCCTTTGAGGGAGA-ATCT 1329
Query 1306 GATCAAGTGATTTGA--C-TGC-T-T--G-AAG-A-TTGTT-CA-A--GCT-A-----A- 1344
| ||||||||||||| | || | | | || | |||| || | ||| | |
Sbjct 1330 GCTCAAGTGATTTGAAGCATGTATATATGCAAACAATTGTGACACACTGCTTATGGTCAA 1389
Query 1345 GGCTCACATTTGCTTTGACCAAGATGTGTAATAGATGTTTCAT----AAGT-ATTGTTAT 1399
|||||||||| ||| ||||||||| ||| ||| |||||||| |||| ||| ||||
Sbjct 1390 GGCTCACATT-GCTATGACCAAGAAAAGTAGTAGCTGTTTCATCTGTAAGTTATTTTTAT 1448
Query 1400 TGACA-TTCACTCTAGCCTTGTGACC-TTAAATGGCTGCTAATAACCCTTTGTA-A-ATG 1455
||| || ||||| || || ||| |||| ||| || |||||| |||||||| | ||
Sbjct 1449 CAACACTT-ACTCTTGCTTTAACACCCTTAAGTGGTTGGTAATAATCCTTTGTATATATA 1507
Query 1456 TCAGATATTTGATTTG--TGTAGAATTCTCAAACTTTGAAAAGAAA-TGTCATTGGTGAT 1512
||||| |||||||||| || | ||||||| |||| |||| ||||| ||||||||||| |
Sbjct 1508 TCAGACATTTGATTTGCCTGCATAATTCTCTAACTCTGAAGAGAAAATGTCATTGGTGCT 1567
Query 1513 TGAAGCATGATTT 1525
|| ||||||||||
Sbjct 1568 TGGAGCATGATTT 1580
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77509641480
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5