BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473821
Length=1546
Score E
Sequences producing significant alignments: (Bits) Value
AT1G44800.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 2248 0.0
AT4G08300.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 739 0.0
> AT1G44800.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr1:16914009-16916997 REVERSE LENGTH=1585
Length=1585
Score = 2248 bits (1217), Expect = 0.0
Identities = 1459/1571 (93%), Gaps = 36/1571 (2%)
Strand=Plus/Plus
Query 1 CCTGCCTCAAACAAATAGAGCTTATCTCATCACTCACCAAACAACTCTCATCAATAT--- 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CCTGCCTCAAACAAATAGAGCTTATCTCATCACTCACCAAACAACTCTCATCAATATAAA 60
Query 58 -A-AAGAGA-----AGAG--ACACA-TA-A-ACAT--A-TT-GATATAGTAGTGATATAT 101
| |||||| |||| | | | || | |||| | || |||||||||||| |||||
Sbjct 61 GAGAAGAGAGTGGTAGAGTTATATATTACACACATAAACTTAGATATAGTAGTGTTATAT 120
Query 102 TCTCGATTAAGTAATAAAGATGAAAGGTGGAAGCATGGAG-AAATTGAAGCCGATATTGG 160
||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 121 TCTTGATTAAGTAATAAAGATGAAAGGTGGAAGCATGGAGAAAATT-AAGCCGATATTGG 179
Query 161 CGATAATTTCACTGCAATTTGGGTATGCAGGCATGTATATCATCACTATGGTCTCGTTCA 220
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 180 CGATAATTTCACTGCAATTTGGGTATGCAGGCATGTACATCATCACCATGGTCTCGTTCA 239
Query 221 AGCATGGCATGGACCATTGGGTTCTTGCCACATACCGTCATGTCGTCGCCACGGTTGTTA 280
| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 240 AACATGGCATGGACCATTGGGTTCTTGCTACATACCGTCATGTCGTAGCCACGGTTGTCA 299
Query 281 TGGCTCCCTTTGCTCTCATTTTCGAGAGGAAAATTAGGCCCAAGATCACACTACCAATAT 340
||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||
Sbjct 300 TGGCTCCCTTTGCTCTCATGTTCGAGAGGAAAATTAGGCCCAAGATGACACTAGCAATAT 359
Query 341 TCTGGCGGCTTCTTGCTCTTGGAATATTAGAGCCCCTTTTGGACCAGAATTTGTACTACA 400
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 360 TCTGGAGGCTTCTTGCTCTTGGAATATTAGAGCCCCTCATGGACCAGAATTTGTACTACA 419
Query 401 TAGGATTGAAAAACACGTCAGCATCGTACACTTCTGCCTTTACCAATGCACTTCCCGCCG 460
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TAGGATTGAAAAACACATCAGCATCGTACACTTCTGCCTTTACCAATGCACTTCCCGCCG 479
Query 461 TCACCTTCATTCTCGCCCTCATTTTCAGGCTTGAGACCGTCAACTTTAGAAAGGTCCACA 520
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 480 TCACCTTCATTCTCGCCCTCATTTTCAGGCTTGAGACGGTGAACTTTAGAAAGGTCCACA 539
Query 521 GTGTTGCAAAAGTGGTAGGAACGGTAATAACAGTAGGAGGAGCAATGATAATGACTTTGT 580
||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 540 GTGTTGCAAAAGTGGTAGGAACGGTAATAACGGTTGGAGGAGCAATGATCATGACTTTGT 599
Query 581 ACAAAGGTCCGGCCATCGAGATCGTGAAAGCCGCTCATAATTCTTTCCACGGCGGTTCAA 640
|||||||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||||| |
Sbjct 600 ACAAAGGTCCGGCCATTGAGATTGTGAAGGCCGCACATAATTCTTTCCACGGTGGTTCGA 659
Query 641 GCAGCACGCCCACCGGCCAACACTGGGTCCTCGGAACCATAGCCATTATGGGCAGTATCT 700
||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 660 GCAGCACACCCACCGGCCAACATTGGGTCCTTGGAACCATAGCCATTATGGGCAGTATCT 719
Query 701 CTACATGGGCTGCTTTCTTCATTTTACAATCATACACATTAAAAGTTTATCCAGCTGAGC 760
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 720 CTACATGGGCTGCTTTCTTCATTTTACAGTCATACACATTAAAAGTCTATCCAGCTGAGC 779
Query 761 TATCACTTGTAACGTTGATATGTGGGATAGGGACGATCCTAAACGCCATTGCTTCGCTAA 820
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 780 TATCACTAGTAACGTTGATATGTGGGATAGGGACGATCCTAAACGCTATTGCTTCGCTAA 839
Query 821 TAATGGTTCGTGACCCGAGTGCATGGAAAATCGGTATGGATTCCGGAACACTCGCCGCGG 880
|||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct 840 TAATGGTTCGTGACCCGAGTGCATGGAAAATCGGCATGGATTCAGGGACACTCGCCGCGG 899
Query 881 TTTACTCTGGAGTGGTTTGTTCGGGGATAGCGTATTACATACAAAGCATTGTGATTAAGC 940
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 900 TTTACTCTGGAGTGGTTTGTTCGGGAATAGCTTATTACATACAAAGCATTGTGATTAAGC 959
Query 941 AACGTGGCCCTGTCTTTACGACGTCGTTTAGTCCTATGTGTATGATCATCACTGCCTTCC 1000
||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 AACGTGGACCGGTTTTTACGACGTCGTTTAGTCCTATGTGTATGATCATCACTGCCTTCC 1019
Query 1001 TCGGCGCATTGGTTTTGGCTGAGAAAATCCACCTTGGAAGTATAATTGGGGCAGTTTTCA 1060
|||| |||||||||||||||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct 1020 TCGGTGCATTGGTTTTGGCTGAGAAAATCCATCTCGGAAGCATAATCGGGGCGGTTTTCA 1079
Query 1061 TAGTTCTTGGACTATACAGTGTGGTATGGGGAAAAAGTAAGGACGAAGTGAATCCTTTGG 1120
|||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1080 TAGTGCTTGGACTATACAGTGTGGTATGGGGTAAAAGTAAAGACGAAGTGAATCCTTTGG 1139
Query 1121 ATGAGAAAATCGTAGCCAAGAACCAAGAGCTTCCGATCACTAACGTAGTCAAACAAACGA 1180
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 1140 ATGAGAAAATCGTAGCCAAGTCCCAAGAGCTTCCGATTACTAACGTAGTCAAACAAACGA 1199
Query 1181 ACGGTCATGATGTCTCGGGAGCACCGACTAATGGTGTGGTTACAAGTACCTGATCCAAGT 1240
||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1200 ACGGTCACGATGTCTCGGGAGCACCGACTAACGGTGTGGTTACCAGTACCTGATCCAAGT 1259
Query 1241 TCCAAAAGAGAAGAAAGATACTTAAACAAAGATTTCATCTCCATGCATTGGAGGTGGA-G 1299
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1260 CCCAAAAGAGAAGAAAGATACTTAAACAAAGATCTCATCTCCATGCATTGGAGGTGGAAG 1319
Query 1300 ATTTTGGTTATCTTTCTTGTTGAttttgtgtttttgtttttttttttttACATTTTCTAA 1359
||||| ||||||||||||||| |||| ||| ||||||| |||| |||||||||||
Sbjct 1320 -TTTTGATTATCTTTCTTGTTG-TTTT-TGT----GTTTTTTCTTTT--ACATTTTCTAA 1370
Query 1360 TCGCTCTACGCTTAACTTT-AGTATCTTTTTACATTATGTA-TGTTTTTCAGCTTTTACT 1417
||| ||||||||||||||| ||||||||||||| ||||||| || ||||| |||| ||||
Sbjct 1371 TCGATCTACGCTTAACTTTTAGTATCTTTTTACCTTATGTAATGATTTTCTGCTTCTACT 1430
Query 1418 TTCTTGTATTTTGAAATTTCCAGAACGAATGATGAATGAATCATTTGGTAAAACTTGAGC 1477
||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct 1431 TTCTTGTATTT-GAAATTTCCAAAACGAATGATGAATGCATCATTTGGTAAAATTTGAGC 1489
Query 1478 CTACTAAACTATAAA--GGGTAACTTTTATAACTCCAAGAAACTATAGTCGATATTTGGA 1535
||||| ||| | ||| |||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 1490 CTACTTAACAAAAAAAAGGGTAACTCTTATAACTCCAAGAAACTATGGTCGAAATTTGGA 1549
Query 1536 TGTTATACATA 1546
|||||||||||
Sbjct 1550 TGTTATACATA 1560
> AT4G08300.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr4:5244891-5248342 FORWARD LENGTH=1444
Length=1444
Score = 739 bits (400), Expect = 0.0
Identities = 835/1041 (80%), Gaps = 46/1041 (4%)
Strand=Plus/Plus
Query 117 AAAGATGAAAGGTGG-AAGCATGGAGAAATTGAAGCCGATATTGGCGATAATTTCACTGC 175
||| |||||||| || ||| ||||| ||||||||||| ||| | || || || ||||| |
Sbjct 131 AAA-ATGAAAGGAGGAAAG-ATGGATAAATTGAAGCCAATAATAGCAATCATATCACTCC 188
Query 176 AATTTGGGTATGCAGGCATGTATATCATCACTATGGTCTCGTTCAAGCATGGCATGGACC 235
||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||| |||
Sbjct 189 AATTTGGATATGCAGGCATGTACATCATTACTATGGTCTCCTTCAAGCATGGCATGAACC 248
Query 236 ATTGGGTTCTTGCCACATACCGTCATGTCGTCGCCACGGTTGTTATGGCTCCCTTTGCTC 295
||||| | ||||| || ||||| |||||||||||||| |||| || ||||| |||||||
Sbjct 249 ATTGGATCCTTGCTACTTACCGACATGTCGTCGCCACAATTGTCATAGCTCCTTTTGCTC 308
Query 296 TCATTTTCGAGAGGAAAATTAGGCCCAAGATCACACT-ACCAATATT-CTGGCGGCTTCT 353
||||| ||||||||||||| ||||| ||||| ||| | ||| | || || || ||||
Sbjct 309 TCATTCTCGAGAGGAAAATAAGGCCTAAGATGACA-TGGCCATTGTTCCT-TAGGATTCT 366
Query 354 TGCTCTTGGAATATTAGAGCCCCTTTTGGACCAGAATTTGTACTACATAGGATTGAAAAA 413
||| |||||| | |||| || |||||||||||||| ||||||||||||||| |||||
Sbjct 367 TGCCCTTGGATTCCTAGAACCACTTTTGGACCAGAACTTGTACTACATAGGAATGAAAGC 426
Query 414 CACGTCAGCATCGTACACTTCTGCCTTTACCAATGCACTTCCCGCCGTCACCTTCATTCT 473
|||||||||| |||| | |||||||||| ||||||||||||||| | |||||||| |
Sbjct 427 CACGTCAGCAACGTATAGTTCTGCCTTTGTTAATGCACTTCCCGCCATTACCTTCATAAT 486
Query 474 CGCCCTCATTTTCAGGCTTGAGACCGTCAACTTTAGAA-AGGTCCAC--AGTGTTGCAAA 530
|| ||||||||||| | || || || || ||| ||| | | ||| ||| |||||||
Sbjct 487 GGCTGTCATTTTCAGGATAGAAACTGT-AAATTT-GAAGAAG-ACACGAAGTCTTGCAAA 543
Query 531 AGTGGTAGGAACGGTAATAACAGTAGGAGGAGCAATGATAATGACTTTGTACAAAGGTCC 590
|||| | ||||| | |||||| || |||||||||||| | ||||| ||||||||||||||
Sbjct 544 AGTGATTGGAACAGCAATAACTGTGGGAGGAGCAATGGTTATGACGTTGTACAAAGGTCC 603
Query 591 GGCCATCGAGATCGTGAAAG-CCGCTCATAATTCTTTCCACGGCGG-TTCAAGCAGCACG 648
||||| ||| || | ||| | ||||||| ||||| |||||||| | | | ||||
Sbjct 604 AGCCATTGAGCTC-TTTAAGACTGCTCATAGCTCTTTACACGGCGGCTCCTCG-GGCAC- 660
Query 649 C-CCACCG-G-CCA---A-C---ACTGGG-TCCTCGGAAC-CATAGCCATTATGGGCAGT 696
| || ||| | ||| | | | |||| | | |||||| | |||| ||||||| |||
Sbjct 661 CTCCTCCGAGACCACTGATCAGAATTGGGTTAC-CGGAACTC-TAGCGGTTATGGGTAGT 718
Query 697 ATCTCTACATGGGCTGCTTTCTTCATTTTACAATCATACACATT-AAAAGTTTATCCAGC 755
||| | || ||||| | |||||||||| ||||||| | ||| || |||| ||||| ||
Sbjct 719 ATCACCACTTGGGCAGGTTTCTTCATTCTACAATCGTTCACGTTGAAAA-AATATCCGGC 777
Query 756 TGAGCTATCACTTGTAACGTTGATATGTGGGATAGGG-ACGATCCTAAACGCCATTGCTT 814
|||||| || || || | || ||| |||| || ||| ||| || ||||| |||| ||||
Sbjct 778 TGAGCTTTCGCTAGTGATGTGGATTTGTGCCAT-GGGAACGGTCTTAAACACCATCGCTT 836
Query 815 CGCTAATAATGGTTCGTGACCCGAGTGCATGGAAAATCGGTATGGATTCCGGAACACTCG 874
|||| |||||||| || ||| || ||||||||| |||||||||| || || ||||| |
Sbjct 837 CGCTCATAATGGTGCGCGACGTAAGCGCATGGAAAGTCGGTATGGACTCGGGCACACTTG 896
Query 875 CCGCGGTTTACTCTGGAGTGGTTTGTTCGGGGATAGCGTATTACATACAAAGCATTGTGA 934
| || |||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 897 CGGCTGTTTACTCCGGAGTGGTTTGTTCGGGTATGGCGTATTACATACAAAGCATTGTGA 956
Query 935 TTAAGCAACGTGGCCCTGTCTTTACGACGTCGTTTAGTCCTATGTGTATGATCATCACTG 994
||| | |||| || || || |||||||| ||||||||||||||||| |||||||||||||
Sbjct 957 TTAGGGAACGAGGTCCGGTTTTTACGACATCGTTTAGTCCTATGTGCATGATCATCACTG 1016
Query 995 CCTTCCTCGGCGCATTGGTTTTGGCTGAGAAA-ATCCACCTTGGAAGTATAATTGGGGC- 1052
| |||||||||| || ||||||||||| ||| || ||||||||||||||||| |||||
Sbjct 1017 CTTTCCTCGGCGTGTTAGTTTTGGCTGA-AAAGATTCACCTTGGAAGTATAATCGGGGCG 1075
Query 1053 AGTTTTCATAGTTCTT-GGACTATACAGTGTGGTATGGGGAAAAAG-TAAGGACGAAGTG 1110
| |||| || || ||| || ||||| || || || ||||| ||| | |||||||||||||
Sbjct 1076 ATTTTT-ATCGT-CTTCGGGCTATATAGCGTTGTGTGGGGGAAA-GCTAAGGACGAAGTG 1132
Query 1111 A-ATCCTTTGGATGAGAAAAT 1130
| ||| | ||| ||||||||
Sbjct 1133 ATATCGGT-GGAAGAGAAAAT 1152
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76304828400
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5