BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473837 Length=2201 Score E Sequences producing significant alignments: (Bits) Value AT1G45150.1 | Symbols: | unknown protein; Has 219 Blast hits t... 3393 0.0 > AT1G45150.1 | Symbols: | unknown protein; Has 219 Blast hits to 202 proteins in 78 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr1:17077448-17082503 REVERSE LENGTH=2272 Length=2272 Score = 3393 bits (1837), Expect = 0.0 Identities = 2091/2212 (95%), Gaps = 24/2212 (1%) Strand=Plus/Plus Query 1 TGTTGTTTTGCTTCCTTTCACAAAGTTTCTCGCAAAACGCGATCGtctcttcttcttctt 60 |||| ||| ||||||||||||||| | ||||||||||||||||||||||| || |||||| Sbjct 57 TGTTCTTTGGCTTCCTTTCACAAA-TCTCTCGCAAAACGCGATCGTCTCTCCTCCTTCTT 115 Query 61 cttcttcttcAATCCCTCACAAGTTTC-CTGCGACTTTCTCGGGAAA-C---aaaaaaaa 115 | | | || || | || ||| ||||||||||||||| ||| | |||||||| Sbjct 116 C-AAGCCCTGAAAGAATCTCCAGATTCTCTGCGACTTTCTCGGAAAACCAAAAAAAAAAA 174 Query 116 TGGACAACAATGGAT-TGCAAGAGATGACTGTACCAGTAGAAGGAGTGGCTGGTGGAGGA 174 |||||||||||| || | |||||||||||||| ||||||||||||||||||||||||||| Sbjct 175 TGGACAACAATGTATCT-CAAGAGATGACTGTGCCAGTAGAAGGAGTGGCTGGTGGAGGA 233 Query 175 ACAGCTTATGGGTTTAATGATGCAGAGCCACTTAAACAATCTACGGATCCATCAGAGGTT 234 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 234 ACAGCTTATGGGTTTAATGATGCTGAGCCACTTAAACAATCTACAGATCCATCAGAGGTT 293 Query 235 CCAACTGCTGATTTGGTGAATGTTTGGTGTATGCCTAATACTGTTAATGTTGGTTCACAA 294 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 294 CCAACTGCTGATTTGGTGAATGTTTGGTGTATGCCTAATACAGTTAATGTTGGTTCACAA 353 Query 295 GAAACACCTCGTCCTCTAGAGCCTATAAATCTTTTGGCAGCTAGAAATGAGAGAGAAAGT 354 ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 354 GAAACACCTCGAGCTCTAGAGCCTATAAATCTTTTGGCGGCTAGAAATGAAAGAGAAAGT 413 Query 355 TTTCAGATCGCCATGCGCCCTAAAGTTTCTTGGGCTGCTTCCAGCCCTTCCGGGAGTGTT 414 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct 414 TTTCAGATAGCCATGCGTCCTAAAGTTTCTTGGGCTGCTTCCAGCCCTTCCGGGATTGTT 473 Query 415 CAGGTTCAGTGCAATGACTTATGCTCCTCTGCTGGAGATAGATTGGTTGTTGGCCAGTCG 474 ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 474 CAGGTTCAGTGCAGTGACTTATGCTCTTCTGCTGGAGATAGATTGGTTGTTGGCCAGTCA 533 Query 475 CTAAACTTGCGGCGAGTGGTGCCTGTCTTAGGTGTTCCTGATGCTTTGGTGCCCCTTGAT 534 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 534 CTAAAGTTGCGGCGAGTGGTGCCTGTCTTAGGCGTTCCTGATGCTTTGGTGCCCCTTGAT 593 Query 535 TTACCCGTTTCTCAACTTAGCTTATTTCCAGGAGAAACAAGTGTGATTTGGGTCTCAATA 594 || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 594 TTGCCTGTTTCTCAACTTAGCTTATTTCCAGGAGAAACAAGTGTCATTTGGGTCTCAATA 653 Query 595 GACGTTCCTAATCGGCAGCCTCCTGGTCAATATGAGGGAGAGATCATTGTTTCTGCAATG 654 |||||||||| | |||||||||||||||||||||| |||||||||||| ||||||| ||| Sbjct 654 GACGTTCCTACTGGGCAGCCTCCTGGTCAATATGAAGGAGAGATCATTATTTCTGCTATG 713 Query 655 AAAACTGATGGAGGCGGTTCTGCTCACTTGGGAAAGCATGAGAAAGATCAGCTATGTGTG 714 ||||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||| Sbjct 714 AAAACTGATGGAGGCGGTTCTTCTCACTTGGCAAAGCATGAGAAGGATCAGCTCTGTGTG 773 Query 715 GAACTTAATAACTGTCTTGATATTATGGAACCAATAGAGGGAAAACCCATGGATGAAGTG 774 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 774 GAACTTAATACCTGTCTTGATATTATGGAACCAATAGAGGGAAAACCCATGGATGAAGTG 833 Query 775 GTAGAAAGAATAAAATGTGCAAGTTCGTCATTAAGAAGAATTATCTTCTCTCCATCATTT 834 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 834 GTAGAAAGAATTAAATGTGCAAGTTCGTCATTAAGAAGAATTCTCTTCTCTCCATCATTT 893 Query 835 TCGGAGTTCATTTCTACGAATGGATCAACCGATATGATGGAAGAAGATGTTGTTTCAAAC 894 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 894 TCGGAGTTCATTTCTACGAATGGATCAACTGATATGATGGAAGAAGATGTTGTTTCAAAC 953 Query 895 CTTTCGCTGCGTATCAAGCTAAGATTGACAGTTTGGGAATTTATTATTCCAGTGACTCCA 954 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 954 CTTTCACTGCGTATCAAGCTAAGATTGACAGTTTGGGAATTTATTATTCCAGTGACTCCA 1013 Query 955 TCACTCCCTTCTGTTATTGGCGTCTCTGACACTGTTATTGAGGATCGTTTTGGTGTTGAA 1014 ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 1014 TCACTCCCTGCTGTTATTGGTGTCTCTGACACTGTTATTGAGGATCGTTTTGCTGTTGAA 1073 Query 1015 CGTGGAAGTGAAGAGTGGTACGAGAAATTGGATCTCCATTTTAAGTGGCTACTTCAGTAT 1074 | |||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||| Sbjct 1074 CATGGAAGTGAAGATTGGTACAAGAAATTGGATCTCCATTTTAAATGGCTTCTTCAGTAT 1133 Query 1075 CGGATCAGTCCATACTTTTGCAAATGGGGTGAAGGCATGCGTGTCTTGACATACACCTCA 1134 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1134 CGGATCAGTCCGTACTTTTGCAAATGGGGTGAAAGCATGCGTGTCTTGACATACACCTCA 1193 Query 1135 CCATGGCCTGCCGATCATCCAAAATCTGATGAATATCTCTCTGATCCAAGGCTTGCCGCT 1194 ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1194 CCATGGCCTGCTGATCATCCAAAATCTGATGAATATCTCTCTGATTCAAGGCTTGCCGCA 1253 Query 1195 TATGCAGTACCGTATAGACAAGTTATAGCAGGGGATGATAT-ACGGGAAAGTTATCTGCG 1253 ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| Sbjct 1254 TATGCAGTACCGTATAGACAAGTTATAGCAGGGGATGAT-TCAAGGGAAAGTTATCTGCG 1312 Query 1254 AAAAGAAGTTGAGATACTGAGGAGTAAACCCCATTGGAAAAAAGCTTACTTTTACTTGTG 1313 ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct 1313 GAAAGAAGTTGAGATATTGAGAAGTAAACCCCATTGGAACAAAGCTTACTTTTACTTGTG 1372 Query 1314 GGATGAGCCACTGAATATGGAGCACTTTGACAGCGTTCGCAAGATGGCCAGTGAAATTTA 1373 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1373 GGATGAGCCACTGAATATGGAGCACTTTGACAACGTTCGCAAGATGGCCAGTGAAATTTA 1432 Query 1374 CGCCTATGCCCCGGATGCTCGTGTTTTGACTACATACTACTGTGGACCCGGTGATGCACC 1433 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct 1433 CGCCTATGCCCCGGATTCTCGTGTTTTGACTACATACTACTGTGGACCGGGAGATGCACC 1492 Query 1434 TCTTGCTCCGACACCTTTCGAATCTTTTGTCAAAGTTCCAAATCTACTTCGA-CCTCATA 1492 |||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||| Sbjct 1493 TCTTGCTCCGACACCTTTTGAATCTTTTGTCAAAGTTCCAAATCTCCTTCGACCCT-ATA 1551 Query 1493 CTCAGATATACTGCACAAGTGAGTGGGTGCTTGGAAACCGGGAGGATTTGGTGAAGGATA 1552 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1552 CTCAGATATACTGCACAAGTGAGTGGGTGCTTGGTAACCGGGAGGATTTGGTGAAGGATA 1611 Query 1553 TTGTTGAGGAATTGCAGACAGAGAATGGTGAGGAATGGTGGACGTACATATGCCTTGGAC 1612 || |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1612 TTCTTGACGAATTGCAGACAGAGAATGGTGAGGAATGGTGGACATACATATGCCTTGGAC 1671 Query 1613 CTTCAGATCCTCACCCAAATTGGCATCTGGGGATGCGTGGAACACAGCAACGGGCAGTGA 1672 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1672 CTTCAGATCCTCACCCAAATTGGCATCTGGGGATGCGTGGTACACAGCAACGGGCAGTGA 1731 Query 1673 TGTGGCGTGTGTGGAAAGAAGGTGGAACCGGGTTCTTGTACTGGGGTGCAAATTGCTATG 1732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1732 TGTGGCGTGTGTGGAAAGAAGGTGGAACCGGGTTCTTGTACTGGGGTGCAAATTGCTATG 1791 Query 1733 AGAAGGCAACGGTTCCAAGCGCCGAGGTAAAGTTCAGGCGCGGTCTTCCTCCTGGTGATG 1792 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1792 AGAAGGCAACGGTTCCAAGCGCCGAGGTAAAGTTTAGGCGCGGTCTTCCTCCTGGTGATG 1851 Query 1793 GAGTTCTTTACTACCCCGGTGAAGTTTTCTCATCTTCCTCAGAGCCCGTTGCTTCACTTA 1852 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1852 GAGTTCTTTACTACCCCGGTGAAGTTTTCTCATCTTCTTCAGAGCCAGTTGCTTCACTTA 1911 Query 1853 GGCTAGAGCGCCTTCTTAGTGGCTTACAGGATTATGAGTACTTAAAGCTGTATGAGTCAA 1912 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1912 GGCTAGAGCGCCTTCTTAGTGGCTTACAGGATTATGAGTACTTGAAGCTGTATGAGTCAA 1971 Query 1913 AATACGGAAGAGCAG-AAGCAATGGGGCTATTGGAGAAGACAGGGGTGTACACGGGGCCG 1971 |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1972 AATACGGAAGAG-AGGAAGCGATGGGGCTATTGGAGAAGACAGGGGTGTACACGGGGCCG 2030 Query 1972 GAGCGATACACTTTGGAACATAGACCAATCGATGTATTGCGAGGAGAAGTGTACAACACA 2031 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2031 GAGCGCTACACTTTGGAACATAGACCGATCGATGTATTGCGAGGAGAAGTGTACAACACA 2090 Query 2032 TGTAGACCATCTTGAGTAACCAGATCGTTTTGTATCTACCTATACACACTCTAAGTTAGC 2091 |||||||||||||||||||||||||||||| ||||||| || | ||||||| |||||| Sbjct 2091 TGTAGACCATCTTGAGTAACCAGATCGTTTAGTATCTA--TA-A-ACACTCTCGGTTAGC 2146 Query 2092 CCTAATTTAACAATAAAAGAACATAAGCA-GAAAACTCTAACAACGTCTAGATTGTCCAG 2150 ||||| |||| ||||||||||||||| || |||||||||||||| ||||||||| |||| Sbjct 2147 CCTAAGTTAATAATAAAAGAACATAA-CAAGAAAACTCTAACAATGTCTAGATTA-CCAG 2204 Query 2151 TGAAAAAGGTTAATTAGTATGAAAACAATAAAATAGATAGATT-GTCTTTGT 2201 ||||||||||||||||||||||||| ||||||||||||||||| | |||||| Sbjct 2205 TGAAAAAGGTTAATTAGTATGAAAATAATAAAATAGATAGATTTG-CTTTGT 2255 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 109186185375 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5