BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473856
Length=2220
Score E
Sequences producing significant alignments: (Bits) Value
AT1G45545.1 | Symbols: | Plant protein of unknown function (DU... 3210 0.0
AT5G42880.1 | Symbols: | Plant protein of unknown function (DU... 750 0.0
> AT1G45545.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr1:17180615-17182957 REVERSE LENGTH=2259
Length=2259
Score = 3210 bits (1738), Expect = 0.0
Identities = 2007/2138 (94%), Gaps = 13/2138 (1%)
Strand=Plus/Plus
Query 6 TGATGATAAAGTTTCCAATGACCTTTGTTTACTTCCTGATCTCAATGTCGATTCCTCGAC 65
|||| ||||||||||||||||| || |||||||||||||||| ||| ||||||| || |
Sbjct 9 TGATCATAAAGTTTCCAATGACATTAGTTTACTTCCTGATCTTAATTTCGATTCTTCCTC 68
Query 66 GCCTTTCT-CTAGTATCGAATTCGATGCATCCATTAGTGATCTCCTAAACTTAGAAACTG 124
|||||| | ||||||||||||||||| |||| ||| |||||||||||||||| ||||| |
Sbjct 69 GCCTTT-TACTAGTATCGAATTCGATTCATCGATTTGTGATCTCCTAAACTTGGAAACCG 127
Query 125 GTGGAGATACACCAAATCTTATACCGGAACATAATCCGTTTTTTGATTCTTTTTATGGA- 183
||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct 128 GTGGAGATACACCAAATCTTATACCTGACCATAATCCGTTTTTTGATTCTTTCGATGGAC 187
Query 184 --C---ATGAAGAAGAAGATTCACATTTTGTTGTTGAAGCAGAAGAGTCTCCAAAGGTGT 238
| | |||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 188 TTCAAGAAGAAGAAGAAGATTCACATTTTGTTGTTGAA-C--CAGAGTCTCCAAAGGTGT 244
Query 239 ATATTGCACCAAGAGTTGTGATTAACCATCAAGACTCGTTTTCATTAGACTCGAGAATCG 298
|||||||||||||||| |||| |||||||||||||||||||| ||||||| ||| ||
Sbjct 245 ATATTGCACCAAGAGTCATGATAAACCATCAAGACTCGTTTTCGCTAGACTCTCGAAACG 304
Query 299 ATGAATTTATCGAAGATGCAAGGATATTACCTGGCTCACCTGGAGGAATTCAAGATGTTG 358
|||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| |||
Sbjct 305 ATGAATATATCGAAGATGTAAAGATATTGCCTGGCTCACCTGGAGGAATTCAAGATCTTG 364
Query 359 GTCTTTCACGTCTTAAAGTTCCTGGCTCACCAAGAGCTTTTGTTCATCCGAGATCATCTG 418
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 365 GTCTTTCACGTCTTAAAGTTCCTGGCTCACCAAGAGCTTTTGTGCATCCGAGATCATCTG 424
Query 419 CATCCCCACGTTTCGGGTCACCTACGAGTCCTGTCTTGATCGATACCGCTGCACCGTTTG 478
|||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||
Sbjct 425 GATCCCCGCGTTTCGTGTCACCGACAAGTCCTGTCTTGATCGATACCGCTGCACCGTTTG 484
Query 479 AATCGGTCAAGGAAGCGGTTTCAAAGTTTGGTGGGATCACAGATTGGAAAGCACATAAAA 538
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 485 AATCGGTCAAGGAAGCGGTTTCTAAGTTTGGTGGAATCACAGATTGGAAAGCACATAAAA 544
Query 539 TCCAGACAATAGAGAGACGGAAGACGGTGGATCAAGAGCTTGAGAAGATACAAGAAGATA 598
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 TCCAAACAATAGAGAGACGGAAGACGGTGGATCAAGAGCTTGAGAAGATACAAGAAGATA 604
Query 599 TGCCTGAGTATAAGAAACAAGCAGTTGTAGCGGAAGAGGCGAAGCATCATGTGGTGATGG 658
||||||| || |||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct 605 TGCCTGACTACAAGAAACAAGCAGTTGTAGCGGAAGAAGCAAAGCATCAGGTGGTGATGG 664
Query 659 AGCTTGAGAGGACAAGGAATGTCGTCGAAGAGCTTAAACTGGAGCTAGAGAAGGCTGAAA 718
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 665 AGCTTGAGAGGACAAGGAATGTCGTCGAAGAGCTAAAACTGGAGCTAGAAAAGGCTGAAA 724
Query 719 AAGAAGAGCAACAAGCGAAACAAGATTCTGATCTCGCGAAGCTGCGAGTGGAGGAAATGG 778
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 725 AAGAAGAGCAACAAGCGAAACAAGATTCTGATCTCGCGAAGCTGCGTGTGGAAGAAATGG 784
Query 779 AGCAAGGGATAGCAGATGAAGCGAGTGTCGCAGCGAAAACACAGCTTGAGGTAGCTAAAG 838
||||||||||||| | ||| | ||||| ||||||||| | ||||| ||||| |||||||
Sbjct 785 AGCAAGGGATAGCTGGTGAGGTAAGTGTTGCAGCGAAATCGCAGCTCGAGGTGGCTAAAG 844
Query 839 CGAGGCATTTGTCAGCGGTTTCTGAGCTAGGAACCATAAGAGAAGAGATAGAAATGGTGT 898
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 845 CGAGGCATTTGTCAGCGGTGTCTGAGCTAGGAACCATAAGAGAAGAGATAGAAATGGTGT 904
Query 899 CCAATGAGTATGAGTCTGTTTTGAGGGAGAAAGATTTGGCTGCGAAAAAAGCAGAGGATT 958
||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||||| |
Sbjct 905 CCAATGAGTATGAATCTCTTTTGACGGAGAAAGATTTGGCTGCTAAAAAAGCAGAGGACT 964
Query 959 CTGTTTTGAAAGCTAAAGATGTAGAGAAACAAATGGAGGGTTTAACGATAGAGGTCATTG 1018
||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct 965 CTGTTTTGAAAGCTAAAGATGTAGAGAAACAAATGGAGGGTTTGACTATGGAGGTCATTG 1024
Query 1019 CAACCAAGCAGTTATTGGAGTCAGCTCATGCGACTCATCTCGAAGCTCAAGAAAAGAAAC 1078
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 1025 CAACCAAGCAGTTATTGGAGTTAGCTCATGCGACTCATCTTGAAGCTCAAGAAAAGAAAC 1084
Query 1079 TTGATGCAGCCATGGCTCGAGACCAGGACGTTTATAACCAGGAGAAGGAACTTAAAATGG 1138
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1085 TCGATGCAGCCATGGCTCGAGACCAGGACGTTTATAACCAGGAGAAGGAACTCAAAATGG 1144
Query 1139 TGGAAGAAGAGATTAAGAGGTTTAGACAAGACATTGATGCGGCAGATGATGTGAAAACCA 1198
||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |
Sbjct 1145 TGGAAGATGAGATTAAGAGGTTTAGACAAGATATTGATGCGGCAGATGATGTCAAAACAA 1204
Query 1199 AACTAAAGACTGCTTCTGCACTTCAACAAGATTTAAGGGCCGAAATAGCCGCTTACAAAG 1258
|||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||
Sbjct 1205 AACTAAAGACTGCTTCTGCACTTCAACAAGATTTGAGAGCCGAGATAGCTGCTTACAAAG 1264
Query 1259 ACTCAAACGTGGGAAAGAGAAACAACAGTGTCATACAAGCAGCGGTTGATTCCGCGAGGA 1318
|||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||
Sbjct 1265 ACTCAAACATGGGAAAGAGAAACAACAGTGACATACAAGCAGCGGTTGATTCTGCTAGGA 1324
Query 1319 AGGAGCTTGAAGAAGTTATATCCAACATTGAGAAAGCAAATTCCGAGGTGAAAACTTTGA 1378
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1325 AGGAGCTTGAAGAAGTTATATCCAACATAGAGAAAGCAAATTCCGAGGTGAAAACTTTGA 1384
Query 1379 AGATAATTGTCGGATCATTGCAGTCGGAACTTGCGAGAGAGAAGCAAGATTTATCGGAAA 1438
||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 1385 AGATAATTGTCGGATCATTGCAGTCTGAACTCGCGAGAGAGAAGCATGATTTATCGGAAA 1444
Query 1439 CCAA-ACAGAGAAACAGAGAAGAAACAAGAGTGGATAAATGCACAGAGATAGCCAAGAAG 1497
||| |||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||
Sbjct 1445 -CAAGACAGAGAAACAGAGAAGACACAAGAGAGGAGAAATGCACAGAGATAGCTAAGAAG 1503
Query 1498 TTGCAAGAAGCTAGCAGGGAGGCAGAGGAGGCAAAGTCACTTGCCATAGCTGGTCGAGAG 1557
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 1504 TTGCAAGAAGCTAGCAGGGAGGCAGAGGAGGCAAAGTCACTTGCGATAGCTGCTCGAGAG 1563
Query 1558 GAGCTGAGAAAGGCGAAGGAAGAGTCGGATGAAGCGAAAACAGGACTCTCTGCGATAGAA 1617
||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 1564 GAGCTAAGAAAGGCGAAGGAAGAGTCCGATGAAGCGAAAACAGGACTCTCTGCGGTAGAA 1623
Query 1618 AGACAGTTAATGGAGGCGAAAAAGGAAATGGAAGCTTCTAGAGCTTCTGAGAAGTTGGCC 1677
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1624 AGACAGTTAATGGAGTCGAAAAAGGAAATGGAAGCTTCAAGAGCTTCTGAGAAGTTAGCT 1683
Query 1678 TTAGCTGCGATAAAAGCGTTGCAAGAGACCGAATATGCTAACAAAATCGAAGACATTAGT 1737
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1684 TTAGCTGCAATAAAAGCATTGCAAGAGACTGAATATGCTAACAAAATCGAAGACATTAGT 1743
Query 1738 AGTTCACCAAGAAGCATAATAATTTCAGTGGAGGAATATTATGAGCTAAGCAAGCAAGCA 1797
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1744 AGTTCTCCAAAAAGCATAATAATTTCAGTGGAGGAATATTATGAGCTAAGCAAGCAAGCA 1803
Query 1798 CATGAGGTAGAAGAGGCAGCCAATAGAAAACTAGCGGAGATCGTCTCCAAAATCGAGATG 1857
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1804 CATGAGGTAGAAGAGGCAGCTAATAGAAAACTAGCGGAGATCGTCTCCAAAATCGAGGTG 1863
Query 1858 GCTAAAGAAGAGGAATCAAGAATCTTGGAAAATCTAGAGGAAGTGAGTAGAGAAACAGCA 1917
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1864 GCTAAGGAAGAGGAATCAAGAATCTTGGAAAATCTAGAGGAAGTGAGTAGAGAAACAGCT 1923
Query 1918 ATAAGAAAGGTAGAGCTAAAAGAAGCAATGACAAAAGTTGAGAAAGCTAGAGATGGGAAG 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1924 ATAAGAAAGGTAGAGCTAAAAGAAGCAATGACAAAAGTTGAGAAAGCTAGAGATGGGAAG 1983
Query 1978 GTTGGTATGGATCACGAGTTGCGAAAATGGAGGTCGGATAACGGGAATAGAAGCCCCGAG 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1984 GTTGGTATGGATCACGAGTTGCGAAAATGGAGGTCGGATAACGGGAATAGAAGCCCCGAG 2043
Query 2038 GGAGGAAATAAGGAGAACTTAAGCAAGTCCAAATCGGCTTTACATAAACCAACATCATTT 2097
||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| | |||
Sbjct 2044 GGAGGAAATAAGGAGAACTTAAGCAAGTCTAAATCGGCTTTGCATCAACCAACAACGTTT 2103
Query 2098 GCATTTGGTGAGCAAGCAAGCAGTAGTAATGTGACCCC 2135
|||||||||| ||||||||||||||||||||||||||
Sbjct 2104 ACATTTGGTGAACAAGCAAGCAGTAGTAATGTGACCCC 2141
Score = 130 bits (70), Expect = 6e-29
Identities = 101/115 (88%), Gaps = 6/115 (5%)
Strand=Plus/Plus
Query 2110 CAAGCAAGCAGTAGTAATGTGAC-CC-----CTGAAACTAAAAAGAAAAAGAAGAGATTT 2163
||||||||||||||||||||||| || ||||||| ||||||||||||||||| ||
Sbjct 2143 CAAGCAAGCAGTAGTAATGTGACTCCTGAAACTGAAACAAAAAAGAAAAAGAAGAGGTTC 2202
Query 2164 TCTTTGCTGCCAAAGGTCTTCATGTTCTTGTCAAGGAAGAAGTCGTCCAACAAGT 2218
||| || | ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 2203 TCTCTGTTACCAAAAGTCTTCATGTTCTTGTCAAGGAAGAAGTCATCCAACAAGT 2257
> AT5G42880.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr5:17191577-17194131 FORWARD LENGTH=2364
Length=2364
Score = 750 bits (406), Expect = 0.0
Identities = 1296/1707 (76%), Gaps = 135/1707 (8%)
Strand=Plus/Plus
Query 396 TTTT-GTTCATCCGAGATCATCT-GCATCCCCACGTTTCGGGTCACCTACGAGTCCT-GT 452
|||| |||| ||||||||| | | | ||| || ||||||||| || ||| | | ||
Sbjct 413 TTTTGGTTC-TCCGAGATC-TGTCGAATCGCCTTGTTTCGGGT---CTCCGA-T--TGGT 464
Query 453 CTTGATCGATACCGCTGCACCGTTT-GAATCGGTCAAG-GAAGCGGTTTCAAAGTTTGGT 510
|| |||||||| ||| |||| ||| |||||||| || ||||| ||||| |||||||||
Sbjct 465 GTT-ATCGATACAGCTTCACC-TTTCGAATCGGT-TAGAGAAGCAGTTTCTAAGTTTGGT 521
Query 511 GGGATCACAGATTGGAAAGCACATAAAATCCAGACAATAGAGAGACGGAAGACGGTGGAT 570
|||||||||||||||||||| ||||| || ||||| |||||||||||||||| ||| |||
Sbjct 522 GGGATCACAGATTGGAAAGCTCATAAGATTCAGACTATAGAGAGACGGAAGATGGTAGAT 581
Query 571 CAAGAGCTTGAGAAGATACAAGAAG-ATATGCCTGAGTATAAGAAACAAGC--AGTTGTA 627
|||||||||||||||||||||||| | ||||||||||| |||| | |||| |||| |
Sbjct 582 GAAGAGCTTGAGAAGATACAAGAAGCA-ATGCCTGAGTACAAGAGAGAAGCTGAGTT--A 638
Query 628 GCGGAAGAGGCGAAGCATC-ATGTGGTG-ATGGAGCTT-GAGAGGACAA-GGAATGTCGT 683
|| ||||| ||||| | | ||| | || | |||| || |||| |||| || | || |
Sbjct 639 GCTGAAGAAGCGAAATA-CGATGCGTTGGA-GGAG-TTAGAGAACACAAAGGGAC-TCAT 694
Query 684 CGAAGAGCTTAAACTGGAGCTAGAGAAGGCTGAAAAAGAAGAGCAACAAGCGAAACAAGA 743
||| ||||| ||||| || | ||||| || ||||| |||||||||||||||||||| ||
Sbjct 695 CGAGGAGCTGAAACTAGAATTGGAGAAAGCGGAAAAGGAAGAGCAACAAGCGAAACAGGA 754
Query 744 TTCTGATCTCGCGAAGCTGCGAGTGGAGGAAATGGAGCAAGG-GATAGC-AGATGAAGCG 801
||| || || ||| || |||| || ||||| |||||| |||| | |||| | |||| ||
Sbjct 755 TTCAGAGCTGGCGCAGATGCGTGTTGAGGAGATGGAGAAAGGTG-TAGCTA-ATGAGGCA 812
Query 802 AGTGTCGCAGCGAAAACACAGCTTGAGGTAGCTAAAGCGAGGCATTTGTCAGCGGTTTCT 861
||||| || | ||||||||||| |||||||||||||||||||| | || || ||||
Sbjct 813 AGTGTTGCTGTTAAAACACAGCTCGAGGTAGCTAAAGCGAGGCAAGTCTCGGCTACTTCT 872
Query 862 GAGCTA-GGAACCATAAGAGAAGAGATAGAAATGGT--GTCCAATGAGTATGA-G-TCTG 916
||| || || | | ||||||||||| |||||||| || ||||| ||| | | | ||
Sbjct 873 GAGTTACGGT-CTGTTAGAGAAGAGATTGAAATGGTTAGT--AATGAATATAAAGATATG 929
Query 917 TTTTGAGGGAGAAAGATTTGGCTGC-GAAAAAAGCAGAGGATT-CTGTTTTGAAAGCTAA 974
|| |||||| ||||| || ||||| || | | || || ||| |||||||| |||||||
Sbjct 930 TT--GAGGGAAAAAGAATTAGCTGCAGAGAGA-GCTGAT-ATTGCTGTTTTGGAAGCTAA 985
Query 975 AGATG-TAGAGA-AACAAATGGAGGGTTTAACG-ATAGAGGTCATTGCAACCAAGCAGTT 1031
||| | | |||| ||| | |||| ||||| | | |||||| | ||||| |||||| ||||
Sbjct 986 AGA-GATTGAGAGAACGA-TGGATGGTTTGA-GTATAGAGCTGATTGCCACCAAGGAGTT 1042
Query 1032 ATTGGAGTCAGCT-CATGCGACTCATCTCGAAGCTCAAGAAAAGAAACTTGA-TGCAGCC 1089
||||| || | | || || ||||||||||||| |||| |||| | || | || |||
Sbjct 1043 GTTGGAATCTG-TGCACACGGCTCATCTCGAAGCGGAAGAGAAGAGA-TTCAGTGTAGCA 1100
Query 1090 ATGGCTCGAGACCAGGACGTTTATAACCAGGAGAAGGAACTTAAA-ATGGTGGAAGAA-G 1147
|||||| | ||||| || |||||||| ||| |||||| || || ||||| ||| || |
Sbjct 1101 ATGGCTAGGGACCAAGATGTTTATAATTGGGAAAAGGAA-TTGAAGATGGTCGAA-AATG 1158
Query 1148 AGATTAAGAGGTTTAGAC-AAGACATT-GATGCGGCAGATGATGTGAAAACCAAACTAAA 1205
| ||| ||||| ||| || |||| || | |||||| |||||||||||| | || ||| |
Sbjct 1159 ATATTGAGAGGCTTA-ACCAAGAGGTTCG-TGCGGCTGATGATGTGAAAGCTAAGCTAGA 1216
Query 1206 GACTGCTTCTGCACTTCAACAAGATTT-AAGGGCCGAAATAGCCGCTTACAAAGACTCAA 1264
|||||||||||| ||||| || ||||| ||| ||||| |||| |||| || || | |
Sbjct 1217 GACTGCTTCTGCTCTTCAGCATGATTTGAAGA-CCGAATTAGCGGCTTTCACGGA-T-AT 1273
Query 1265 A-CGTG-GGAAA---GA-GAAACAACAG--TGTCATACAAGCAGCGGTTGATTCCGCGAG 1316
| | | || || | | || || || ||| || || |||||||| || |||||
Sbjct 1274 ATCAAGCGGTAATCTGTTGTTGGAAAAGAATGACATTCATGCTGCGGTTGAGTCTGCGAG 1333
Query 1317 GA-AGGAGCTTGAAGAAGTTATATCCAACATTGAGAAAGCAAATTCCGAGGTGAAAACTT 1375
|| || | || |||||||| | | ||||||| ||||||||| ||| |||||||||| |
Sbjct 1334 GAGAGAA-CTCGAAGAAGTAAAAGCCAACATAGAGAAAGCAGCTTCAGAGGTGAAAAAAT 1392
Query 1376 TGAAGATAATTG-TCGGATCATTGCAGTCGGAACTTGCGA-GAGAGA-AGCAAGATTTAT 1432
|||||||||| | | || ||||| ||||| || |||| || |||||| | || ||| ||
Sbjct 1393 TGAAGATAATAGCT-GGTTCATTACAGTCTGAGCTTG-GAAGAGAGAGA-CAGGATCTAG 1449
Query 1433 CGGAAACCAAACAGA--GAAAC-A-GAGAA-GAAACA-AGAGTGGATAAAT--GCAC-AG 1483
||||| || || | |||| | | | | | | | |||||| ||| ||
Sbjct 1450 AAGAAACTAAGCAAAAAGAAAGTACGGGTTTGGCCCGGACAAACGATAAAGACGCAGGAG 1509
Query 1484 AG-A-TAGCCAAGAAGTTGC-AAGAAGCT--AGCAGG-GAGGCA-GAGG-AG-G----CA 1530
|| | | | ||| || |||||| | |||||| || | | |||| || | ||
Sbjct 1510 AGGAGTTGGTT-GAAACAGCCAAGAAGTTGGAGCAGGCGACGAAAGAGGCAGAGGATGCA 1568
Query 1531 AAGTCACTTGCC-ATAGCTGGTCGAGAGGAGCTGAGAAAGGCGAAGGAAGAGTCGGATG- 1588
||| || ||| | | |||| | |||| ||||| |||| |||||||||| ||| || |
Sbjct 1569 AAGGCA-TTGGCTACAGCTTCTAGAGACGAGCTTAGAATGGCGAAGGAATTGTCTGA-GC 1626
Query 1589 AAGCGAAAACAGGACTCTCTGCGATAGAAAGACAGTTAATGGAGGCGAAAAAGGAAATGG 1648
||||||||| |||| | ||| ||||||| || | |||| | |||||||||||||||||||
Sbjct 1627 AAGCGAAAAGAGGAATGTCTACGATAGAGAGTCGGTTAGTAGAGGCGAAAAAGGAAATGG 1686
Query 1649 AAGCTTCTAGAGCTTCTGAGAAGTTGGCCTTAGCTGCGATAAAAGCGT-TGCAAGAGACC 1707
| ||| || | || || |||||||| ||||| ||||| |||||||| | ||||||||||
Sbjct 1687 AGGCTGCTCGGGCGTCAGAGAAGTTAGCCTTGGCTGCTATAAAAGC-TCTGCAAGAGACT 1745
Query 1708 GAATATGCTAACAAAATCGAAGACATTAGTAGTTCACCAAGAAGCATAATAATTTCAGTG 1767
|||| | || | | | |||| || |||| || ||||||||||||||| ||||| || ||
Sbjct 1746 GAATCTTCTCAGAGATTCGAGGAGATTAATAATTCACCAAGAAGCATTATAATCTCTGTA 1805
Query 1768 GAGGAATATTATGAGCTAAGCAAGCAAGCACAT-GAGG-TAGAAGAGGCAGCCAATAGA- 1824
|||||||| || |||||||||||||| |||| | ||| | || |||| || ||| | |
Sbjct 1806 GAGGAATACTACGAGCTAAGCAAGCAGGCAC-TCGAGTCT-GAGGAGG-AGGCAA-ACAC 1861
Query 1825 AA-ACTAGCGGAGATCGTCTC-CAAAATCGAGATGGCTAAAGAAGAGGAATCAAGAATCT 1882
|| |||| | ||||| ||||| |||| | ||| |||| ||||| || || ||||||||||
Sbjct 1862 AAGACTATCAGAGATTGTCTCTCAAA-TAGAGGTGGCGAAAGAGGAAGAGTCAAGAATCT 1920
Query 1883 TGGA-AAATCTAGAGGAAGTGAGTAGAGAAAC-AGCAATAAGAAAGGTAGAGCTAAAAGA 1940
|||| ||| ||||||||||||| |||||||| || ||||||| | |||||| |||||
Sbjct 1921 TGGAGAAA-CTAGAGGAAGTGAATAGAGAAATGAGTG-TAAGAAAAGCAGAGCTTAAAGA 1978
Query 1941 AGC-AATGACAAAAGTTGAGAAAG-CTAGAGATGGGAAGGTTGGTA-TGGATCACGAGTT 1997
|| |||| ||||| || |||| |||||||||||||| |||| | |||| || ||| |
Sbjct 1979 GGCTAATGG-AAAAGCCGA-AAAGGCTAGAGATGGGAAG-TTGGGAATGGAGCAAGAGCT 2035
Query 1998 GCGAAAATGGAGGTCGGATAACGGGAA 2024
| |||||||||||||||| || |||||
Sbjct 2036 GAGAAAATGGAGGTCGGAAAATGGGAA 2062
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110139995730
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5