BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473884
Length=1705
Score E
Sequences producing significant alignments: (Bits) Value
AT1G47340.1 | Symbols: | F-box and associated interaction doma... 1949 0.0
AT1G47350.1 | Symbols: | F-box associated ubiquitination effec... 843 0.0
AT2G16220.1 | Symbols: | F-box and associated interaction doma... 340 2e-92
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 326 6e-88
AT3G57590.1 | Symbols: | F-box and associated interaction doma... 69.4 1e-10
> AT1G47340.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:17353847-17356533 REVERSE LENGTH=1695
Length=1695
Score = 1949 bits (1055), Expect = 0.0
Identities = 1292/1406 (92%), Gaps = 18/1406 (1%)
Strand=Plus/Plus
Query 1 AATGTTAAAAACAACTCTGAT---aaaaa-aaataatgttaaaaaaaaCT-CTGATAAAC 55
|||| |||||| ||||||||| ||||| |||||||| |||| |||||| || ||||
Sbjct 5 AATGCTAAAAAAAACTCTGATAAAAAAAATAAATAATGCTAAAGAAAACTGCT-CCAAAC 63
Query 56 TCTCCAAAACGTCGCCGCTGCTCATCCGTCTCCGCCGTTGGTAACGTC-G--C-G--AAT 109
||||||||||||||||| || |||||| || ||||||||| | |||| | | | ||
Sbjct 64 TCTCCAAAACGTCGCCGTTGTTCATCCTTCGCCGCCGTTGATCTCGTCGGATCAGCAAAC 123
Query 110 AGATCGATCATGGTTTCTGTTTCCCTCCCGAAAGAACTCATCCTCGAGATATTGTCA-AG 168
||| || |||||||||| |||||||||||||||||||||||||||||||| ||| | ||
Sbjct 124 AGAACGTTCATGGTTTCAGTTTCCCTCCCGAAAGAACTCATCCTCGAGATTTTG-AAGAG 182
Query 169 ATTGCCTGCAAAGTCAGTTAAAAGGTTTCATTGTGTGTCGAAGCAATGGTCATCAATGCT 228
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 183 ATTGCCTGCAAAGTCAGTTAAGAGGTTTCATTGTGTGTCGAAGCAATGGGCATCAATGCT 242
Query 229 TAGTCGTCCACATTTCACAGAGTTGTTCCTGACCAGGTCCTCCTCTGCTCAGCCGCGTCT 288
|||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 243 TAGTTGTCCACATTTCAGAGAGTTGTTCCTGACCAGGTCCTCATCTGCTCAGCCGCGTCT 302
Query 289 CTTATTCGCCATCGAAAAACGGAATCAGTGGAGCTTCTTCTCGTTGCCTCAGCATCTGAC 348
|||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct 303 CTTATTCGCCATCGAAAAACATAATCAGTGGAGCTTGTTCTCGTTGCCTCAGCGTCTGAC 362
Query 349 TCCATATGAGAAGTCTTCGTCGTTGTCTCTTGTAGTAACCCCTGAATTTCACATGAAGTT 408
|||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||
Sbjct 363 TCCATATGAGAAGTCTTCTTCGTCGTCTGTTGTAGTAACCCCTGAATTTCACATGAAGTT 422
Query 409 CCCTCCAGATGGTATGCAGATCTATCCTCGTCATGACCGACGGTTTTCATGTGGCTATGC 468
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 423 CCCTCCAGATGGTATGCTGATCTATCCTCGTCATGACCGACGGTTTTCATTTGGCTATGC 482
Query 469 CTCTGGTTTGATGTATTTCTATGGTATGTGGATCAACGAG-AGGGCTTACGATGGAGTGC 527
|||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct 483 CTCTGGTTTGATGTATTTCTATGGTATGTGGATCAACGAGCA-CGATTACGATGGAGTGC 541
Query 528 CTGTGATATGTAACCCTATATCAGGACGGTATGCGACCTTACCGTTTCTGGAAAGGTACA 587
|||||||||| |||||| || ||||||||||||||| ||| || |||||||||||||| |
Sbjct 542 CTGTGATATGCAACCCTTTAACAGGACGGTATGCGAGCTTGCCTTTTCTGGAAAGGTATA 601
Query 588 GAAAGGCGTTTAGCTTTTTCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCA 647
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 602 GAAAGGCGTTTAGCTTTTTCGGGTTTGATCCGATTGAGAAGCAGTACAAGGTGTTGTTCA 661
Query 648 TGGCTTACCCATCTGGTCCTGATCCTCATAGAGTTCTGACATTTGGAGCTGGTGAAATGA 707
|||||||||| ||||||||||||| ||||| |||||| ||||||||| |||| |||||||
Sbjct 662 TGGCTTACCCTTCTGGTCCTGATCATCATACAGTTCTAACATTTGGAACTGGAGAAATGA 721
Query 708 GTTGGAGAAAGATAGAATGTTCAGTAAGACATGACATTGCGAGTGATGGGATATGCATCG 767
|||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||
Sbjct 722 GTTGGAGAAAGATAGAATGTTCTGTAAAACATGACATTGTGAGTGATGGGATATGTATCA 781
Query 768 ATGGAGTTGTGTATTACTTAGGTGATACGTCTGAGTTTATGACTGCTTTTGTGGTAGTTT 827
|||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 782 ATGGGGTCATGTATTACTTAGGCGATACGTCTGAGTTTATGACTGCTTTTGTGGTTGTTT 841
Query 828 GCTTTGATGTAAGGTCTGAGACATTCAGCTTTATTTACCCAGGAAGCTATTGTGAAGTGA 887
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 842 GCTTTGATGTGAGGTCTGAGACATTCAGCTTTATTTACCCTGGAAGCTATTGTGAAGTGA 901
Query 888 TAAACTACAAGGGAAAGTTGGGATTGGTTTTTTATGATGATTACGCTGATGATGCCATTG 947
|||||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||
Sbjct 902 TAAACTACAAGGGAAAGTTGGGTTTGGTTTTTTGTGATGATTACACTGATGATGCTATTG 961
Query 948 AGTTGCGTATGTGGGTTCTAGAGGACAAGGAGAAAATGGAGTGGTCAAAGTATGCCTACA 1007
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 962 AGTTGCGTCTGTGGGTTCTAGAGGACAAGGAGAAAATAGAGTGGTCAAAGTATGCCTACA 1021
Query 1008 AGTTGAGGGATGATAAATTCTTGGCTAATTACGTTTCCATTGTTGGAGTGAGTGCTGCGG 1067
|||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1022 AGTTGAAGGATGAGAAATTCTCGGCTCATTACGTTTCCATTGTTGGAGTGAGTGCTGCGG 1081
Query 1068 GTGAGATTGTTCTGTCAATGGCTGATTACACGTCGAGACAACCGTTTTATCTATTCTACT 1127
||||||||||||||||||||||||||| |||||| | ||||||||||||| | |||||||
Sbjct 1082 GTGAGATTGTTCTGTCAATGGCTGATTTCACGTCTAAACAACCGTTTTATGTGTTCTACT 1141
Query 1128 TCAATCCCGAAAGGAACACACTCCAATGTGTTGAAATTCAAGGCTTTGAAGAATACCATG 1187
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1142 ACAATCCCGAAAGGAACACACTCCAATGTACTGAAATTCAAGGCTTTGAAGAACACCATG 1201
Query 1188 GAGTGTTCGACAAGCTTAGCAGAGTCCGCGTCTTTGTAGATGATTGCAGTAGTTTCTACC 1247
|| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 GAACATTCGACAGGCGTAGCAGAGTCCGCGTCTTTGTAGATGATTGCAGTAGTTTCTACC 1261
Query 1248 GTTTTGCAGACCATGTTGAGTATCTAAATGTTGACGAGCCAAAGCTGCTGAAGTCAAAAA 1307
||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct 1262 GTTTTGCTGACCATGTTGAGTATCTGAATGTTGACGAACCAAAGCTGCTGAAGTCCAAAA 1321
Query 1308 TCTATGATGGTCCAAATGCGAAGGTagaa-gaagaagaggaagaagaagaagaagaagaa 1366
||||||||||||||||||||||| ||||| | |||||||||||||||||||| |||||
Sbjct 1322 TCTATGATGGTCCAAATGCGAAGATAGAATGG-GAAGAGGAAGAAGAAGAAGATGAAGAT 1380
Query 1367 gaagaagaagaagaagaagaagaaga 1392
||||| ||||| |||||||||||||
Sbjct 1381 GAAGATCAAGAAAAAGAAGAAGAAGA 1406
Score = 198 bits (107), Expect = 1e-49
Identities = 166/192 (86%), Gaps = 13/192 (7%)
Strand=Plus/Plus
Query 1415 gaagat-gaa-gatgaagatgaagaagaagaagatgaagatggagat---gaagaagaag 1469
|||||| ||| | ||||| |||||||||||||||||||||| |||| ||| ||||||
Sbjct 1341 GAAGATAGAATG-GGAAGAGGAAGAAGAAGAAGATGAAGATGAAGATCAAGAAAAAGAAG 1399
Query 1470 aaTAA-ATCAATTGAGTTAGGGTAAAAGCAATGGGCATGTCTTTTGGTGCTTATCTATGA 1528
|| || |||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1400 AAGAAGATCAATGGAGTTAGGGTAAAAGCAATGGTCATGTCTTTTGGTGCTTATCTATGA 1459
Query 1529 GGTTACGTTCTTTAGTTGTGTAATAAGCGAAGTTTTTGTCTGGTAAATCCCATCTCTCTT 1588
|||||||||||||||||||| || | ||||||| | ||||||||| | |||||| |
Sbjct 1460 GGTTACGTTCTTTAGTTGTG-AA---GTGAAGTTTA-G-CTGGTAAATTCTGTCTCTCAT 1513
Query 1589 AAGTACTAAATC 1600
||||||||||||
Sbjct 1514 AAGTACTAAATC 1525
> AT1G47350.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:17358447-17360722 REVERSE LENGTH=1587
Length=1587
Score = 843 bits (456), Expect = 0.0
Identities = 744/879 (85%), Gaps = 35/879 (4%)
Strand=Plus/Plus
Query 369 CGTT-GTCTCTTGTAGTAACCCCTGAATTTCACATGAAGTTCCCTCCAGATGGTATGCAG 427
|||| ||||| | ||| |||| |||||||||| |||||||||||||||||||||||||||
Sbjct 447 CGTTCGTCTC-T-TAGAAACCGCTGAATTTCATATGAAGTTCCCTCCAGATGGTATGCAG 504
Query 428 ATCTATCCTCGTCATGACCGACGGTTTTCATGTGGCTATGCCTCTGGTTTGATGTATTTC 487
|||||||||||| | |||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 505 ATCTATCCTCGTAACGACCGACGGTTTTCATGTGGCTATGCGTCTGGTATGATGTATTTC 564
Query 488 TATGGTATGTGGATCAACGAG-AGGGCTTACGATGGAGTGCCTGTGATATGTAACCCTAT 546
||||||||| ||||||| ||| | | ||||||||||||||||||| |||||||||||||
Sbjct 565 TATGGTATGCGGATCAAAGAGGATGA-TTACGATGGAGTGCCTGTGCTATGTAACCCTAT 623
Query 547 ATCAGGACGGTATGCGACCTTACC-GTT-TCTGGAAAGGTACAGA-AAGGCGTTTAGCTT 603
| | |||| ||||||||||| || | | | || || ||| ||| ||| ||||||||||
Sbjct 624 AACGGGACATTATGCGACCTTGCCTGCTAT-TGCAA-GGTTTAGACAAG-CGTTTAGCTT 680
Query 604 TTTCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCATG-----G-CTTACCC 657
|||||||| |||||||||||||||||| | |||||| ||||||||| | |||||||
Sbjct 681 TTTCGGGTATGATCCGATTGACAAGCAATTCAAGGTATTGTTCATGATCATGGCTTACCC 740
Query 658 ATCTGGTCCTGATCCTCATAGAGTTCTGACATTTGGA-GCTGGTGAAATGAGTTGGAGAA 716
|| | ||||||||| ||||| |||||||| | ||||| | ||| ||||||||||||||||
Sbjct 741 ATGTAGTCCTGATCATCATAAAGTTCTGAAACTTGGAAG-TGGAGAAATGAGTTGGAGAA 799
Query 717 AGAT-AGAATGTTCAGTAAGACATGACATTGCGAGTGATGGGATATGCATCGATGGAGTT 775
||| | || || | |||||||||| ||| |||||| || ||||||||| |||| |||
Sbjct 800 -GATTAAAACGTACCTTAAGACATGAAATTATGAGTGAAGGTATATGCATCAATGGGGTT 858
Query 776 GTGTATTACTTAGGTGATACGTCTGAG-TTTATGACTGCTTTTGTGGTAGTTTGCTTTGA 834
||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct 859 GTGTATTACTTGGGTGATACGTCTGAGGTTT-TGACTTCTTTTGTGGTAGTTTGCTTTGA 917
Query 835 TGTAAGGTCTGAGACATTCAGCTTTATTTACCCAGGAAGCTATTGTGAAGTGATAAACTA 894
||| |||| |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||
Sbjct 918 TGTGAGGTATGAGACATTCAGCTTTCTTTACCCTGGAAGCTATTGTGAACTGATAAATTA 977
Query 895 CAAGGGAAAGTTGGGATTGGTTTTTTATGATGATTACGCTGATGATGCCATTGAGTTGCG 954
||| ||||||||||| |||||||||||||||||||||| || |||| ||||| |||||||
Sbjct 978 CAAAGGAAAGTTGGGTTTGGTTTTTTATGATGATTACGATGGTGATACCATTAAGTTGCG 1037
Query 955 TATGTGGGTTCTAGAGGACAAGGAGAAAA-TGGAGTGGTC-AAAGTATGCCTACAAGTTG 1012
| | ||||||||||||||| ||||||||| || | ||||| ||| ||||||||| ||||
Sbjct 1038 TCTTTGGGTTCTAGAGGACGAGGAGAAAAATGAA-TGGTCGAAA-TATGCCTACGTGTTG 1095
Query 1013 AGGGATGATAAATTCTTGGCTAATTACGTTTCCATTGTTGGAGTGAGTGCTGCGGGTGAG 1072
||||||||| ||| |||||| |||| ||||| | |||||||||| |||| |||||||
Sbjct 1096 TGGGATGATATATTTTTGGCTCATTATGTTTCGGTAGTTGGAGTGACTGCTACGGGTGAA 1155
Query 1073 ATTGTTCTGTCAATGGCTGATTACACGTCGA-GACAACCGTTTTATCTATTCTACT-TCA 1130
|||||| |||| ||||||||||| || || | | ||||| || ||| | ||||||| | |
Sbjct 1156 ATTGTTTTGTCGATGGCTGATTATACATCTAAG-CAACCCTTCTATATTTTCTACTAT-A 1213
Query 1131 ATCCC-GAAAGGAACACACTCCAATGTGTTGAAATTCAAGGCTTTGAAGAATACCATGGA 1189
| ||| |||| ||| || || |||||||||||||||| ||| |||| ||||||||||| |
Sbjct 1214 A-CCCTGAAATGAATACTCTTCAATGTGTTGAAATTCGAGGTTTTGGAGAATACCATGAA 1272
Query 1190 GTGTTCGA-CAAGCTTAGCAGAGTCCGCGTCTTTGTAGA 1227
| || || ||| || |||||| |||||||||||||
Sbjct 1273 GCGT-CGGGCAATAGGAGTAGAGTCTGCGTCTTTGTAGA 1310
> AT2G16220.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7030155-7031378 REVERSE LENGTH=1224
Length=1224
Score = 340 bits (184), Expect = 2e-92
Identities = 819/1105 (74%), Gaps = 125/1105 (11%)
Strand=Plus/Plus
Query 138 CGAAAGAACTCATCCTCGAGATATTGTCAAGATTGCCTGCAAAGTCAGTTAAAAGGTTTC 197
|||| || |||||||| ||| | ||||||||||||||| ||||||||| |||||||
Sbjct 20 CGAATGATCTCATCCTGGAGGTTTTGTCAAGATTGCCTTTAAAGTCAGTCGCGAGGTTTC 79
Query 198 ATTGTGTGTCGAAGCAATGGTCATCAATGCTTAGTCGTCCACATTTCACAGAGTTGTTCC 257
|||| ||||| |||| ||| |||||||| || || ||||| |||||| |||||||||||
Sbjct 80 ATTGCGTGTCAAAGCGGTGGGCATCAATGTTTGGTAGTCCATATTTCAAAGAGTTGTTCC 139
Query 258 TGACCAGGTCCTCCTCTGCTCAGCCGCGTCTCTTATTCGCCATCG-A-AAAACGGAATCA 315
|||||| | ||||||||| |||| || |||||||| ||||||| | ||||||| |
Sbjct 140 TGACCA-G--ATCCTCTGCTAAGCCACGCCTCTTATTTGCCATCGTACAAAACGG--TGT 194
Query 316 GTGGAGCTTCTTCTCGTTGCCTCAGCATCTGACTCCATATGAGAAGTCTTCGTCGTTGTC 375
|||||| ||||| || | ||| | || | | || |||||| ||||||| | |
Sbjct 195 GTGGAGATTCTTTTC-AT--CTC--C-TC-G-GT---TA-GAGAAG---TCGTCGTCGAC 239
Query 376 TCTTGTAGTAACCCCTGAATTTCACATGAAGTTCCCTCCAGATGGTATGCAG-ATCTATC 434
|||||||| |||| |||||||||| |||||||| ||||| | | | | | |||||||
Sbjct 240 TCTTGTAGCAACCGCTGAATTTCATATGAAGTTATCTCCAAACAATCTAC-GAATCTATC 298
Query 435 CTCG-TCATGA--CC--GACGGTTTTC-ATGTGGCTATGCCTCTGGTTTGATGTATTTCT 488
| | | || | || || ||||| || ||| || |||||||| ||||| ||||| |
Sbjct 299 AT-GATAAT-ACCCCAAGATATTTTTCAAT-TGGTTACGCCTCTGGCTTGATCTATTTAT 355
Query 489 ATGGTATG-TGGATCAACGAGAGGGCTTACGATGGAGTGCCTGTGATATGTAA-CCCTAT 546
|||| || | ||| || || ||| ||| | ||| |||||||||| ||| |
Sbjct 356 ATGG--TGATCGAT--AC--GA-GGC-TAC-----A---CCTCTGATATGTAACCCCAAC 399
Query 547 ATCAGGACGGTATGCGACCTTACCGTTTCTG-GAAAGGTACAGAAAGGCGTTTAGCTTTT 605
| ||||| ||||| ||| |||||| | || | | || |||||||||||||||||||
Sbjct 400 A-CAGGAAGGTATACGATCTTACC-TAAGTGCTATACTTATAGAAAGGCGTTTAGCTTTT 457
Query 606 TCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCATGG-CTTACCCATCTGGT 664
|||||||||| || ||||||||||||||||||| |||| |||| || | |||||||||
Sbjct 458 TCGGGTTTGACCCAATTGACAAGCAGTACAAGGCATTGTCCATGATCT-ATCCATCTGGT 516
Query 665 CCTGATCCTCA-TAGAGTTCTGACATTTGGAGCTGGTGAAATGAGTTGGAGAAAGATAGA 723
|||| || || || | |||| || ||||||| ||| || |||| ||||| ||||||| |
Sbjct 517 CCTGGTCA-CAGTAAAATTCTTACTTTTGGAGATGGGGATATGAATTGGAAAAAGATAAA 575
Query 724 ATGTTCA-GTAAGACATGACATTG-CGAGTGATGGGATATGCATCGATGGAGTTGTGTAT 781
|| | | ||| |||||| ||| | ||| | |||||||||||| |||| ||| |||||
Sbjct 576 ATAT-CGTGTACTACATGATATTTAC-AGTCAAGGGATATGCATCAATGGTGTTTTGTAT 633
Query 782 TACTTAGGTGATACGTCTGAGTT----TA-TGA-C-TGCT-T----T-TG-T---G-GT- 822
||||||||||| ||||| || || || ||| | || | | | || | | ||
Sbjct 634 TACTTAGGTGACACGTCAGA-TTGGGATAATGATCATGATGTAACGTCTGGTAATGTGTT 692
Query 823 AGTTTGCTTTGATGTAAGGTCTGAGACATTCAGCTTTATTTACCCAGGAAGCTATTGTGA 882
||||||||||||| |||| || || | |||| ||||||| | || || | | || |
Sbjct 693 AGTTTGCTTTGATTTAAGATCCGAAAGTTTCACCTTTATTGGCTTAG-AA--TGTGGTCA 749
Query 883 AGTGATAAACTACAAGGG-AAAGTTGGGAT-TGGTTTTTT---ATGATG---AT--T-AC 931
| |||||||||| ||||| ||| || | | | |||||| |||||| || | |
Sbjct 750 ATTGATAAACTATAAGGGCAAA-TTAGC-TGTAATTTTTTGGGATGATGTGGATGATGAT 807
Query 932 GCTG--A----TGATGCCATTGA-GT--TGCGTATGTGGGTTCTAGAGGACAAGGAGAAA 982
| || | |||||||||||| | ||| | |||||||||||||||| ||||||
Sbjct 808 GATGTGAAAGATGATGCCATTGATGAGATGCATGTGTGGGTTCTAGAGGATGTCGAGAAA 867
Query 983 ATGGAGTGGTC-AAAGTATGCCTACAAGTTG-AGGGATGATAAATTCTTG-GCTAATTAC 1039
| ||| ||||| ||| |||||||||| ||| | || |||||||| | | | | |
Sbjct 868 AAGGAATGGTCGAAA-TATGCCTACAC-TTGGACCGAGGATAAATTATACCGTTC-TCAG 924
Query 1040 GTTTCCATTGTTGGAGTGAGTGCTGCGGGTGAGAT--TGTTCTGTCAATG-GCTGATTAC 1096
|||||| | |||||| ||| |||| ||||||| || |||| | || ||| || | ||
Sbjct 925 GTTTCCGTGGTTGGAATGACTGCTTCGGGTGAAATAGTGTT-T-TCGATGCGCA-AGTAT 981
Query 1097 ACGTC-GAGACAACCGTTTTATCTATT-CTACTTCAATCCCGAAAGGAACACA-CTCCAA 1153
|| || || ||||||||||||| | || ||||||||||||||||||||||| | |||| |
Sbjct 982 ACATCTGA-ACAACCGTTTTATGT-TTACTACTTCAATCCCGAAAGGAACA-ATCTCCGA 1038
Query 1154 TGTGTTGAAATTCAAGGCTTTGAAG 1178
|||||||||| ||||| |||||||
Sbjct 1039 CGTGTTGAAATCCAAGGTTTTGAAG 1063
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 326 bits (176), Expect = 6e-88
Identities = 525/684 (77%), Gaps = 62/684 (9%)
Strand=Plus/Plus
Query 146 CTCATCCTCGAGATATTGTCAAGATTGCCTGCAAAGTCAGTTAAAAGGTTTCATTGTGTG 205
|||||| | ||||||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct 28 CTCATCTTGGAGATATTGTCGAGATTGCCTGCAAAATCAGTCCGGAGGTTTCATTGCGTG 87
Query 206 TCGAAGCAATGGTCATCAATGCTTAGTCGTCCACATTTCACA-GAGTTGTTCCTGACCAG 264
||||||| |||| ||||||| || || ||||| |||||| | |||||||||||||||||
Sbjct 88 TCGAAGCGATGGGCATCAATTTTTGGTAGTCCATATTTCA-AGGAGTTGTTCCTGACCAG 146
Query 265 GTCCTCCTCTG-CTCAGCCGCGTCTCTTATTCGCCAT--C---GAAA---AAC---G-G- 310
| ||||| | || ||||||| |||||||||||||| | |||| ||| | |
Sbjct 147 G---TCCTC-GACTAAGCCGCGCCTCTTATTCGCCATCGCAGAGAAAGGCAACAAAGAGA 202
Query 311 -A-A---TCAGTGGAGCTTCTTCTCGTTGCCTCAGCATCTGACTCCATATGAGAAGTCTT 365
| | | |||||| |||||||||| ||| |||| | || |||||||||||| ||
Sbjct 203 AAGACTGTGTGTGGAGGTTCTTCTCGTCGCCACAGCTTGAGAATCCATATGAGAAATC-- 260
Query 366 CGTCGTTGTCTCTTGTAGTAACCCCTGAATTTCACATGAAG-TTCCCTCCAGATGGTATG 424
| || | | ||||||||| |||| |||||||||| || || ||| ||||||| | |
Sbjct 261 C-TCATCGACTCTTGTAGCAACCGCTGAATTTCATGTG-AGATTCTCTCCAGACAATCTA 318
Query 425 CAGATCTATCCTCGTCATGACC---GACGGTTTTC-ATGTGGCTATGCCTCTGGTTTGAT 480
| ||||| || | | |||||| | ||||| || ||| ||||||| ||| |||||
Sbjct 319 CTGATCTGTCATTATTATGACCTAAAATATTTTTCAAT-TGGTTATGCCTTTGGCTTGAT 377
Query 481 GTATTTCTATGGTATGTGGATCAACGAG-AGGGCTTACGATGGAGTGCCTGTGATATGTA 539
||| ||||||||| ||| | | | |||| | | || ||| | |||||||
Sbjct 378 CTATATCTATGGTA-----ATCGA-G-GCCGGGC-T---A--GA---CCTCTAATATGTA 421
Query 540 ACCCTA-TATCAGGACGGTATGCGACCTTACCGT-TTCTGG-AAAGGTACAGAAAGGCGT 596
|||| | || ||||||||||||| | |||||| | || || | | |||||||||||||
Sbjct 422 ACCCCACTA-CAGGACGGTATGCCATCTTACC-TAATC-GGTATACTTACAGAAAGGCGT 478
Query 597 TTAGCTTTTTCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCATGGCTTACC 656
||||||||||||||||||| || ||||||||||| ||||||| |||| ||||| ||| |
Sbjct 479 TTAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGCATTGTCCATGGTTTATC 538
Query 657 CATCTGGTCCTGATCCTCA-TAGAGTTCTGACATTTGGAGCTGGTGAAATGA-GTTGGAG 714
|||||||||||| || | | ||||||| | |||||||||||||| || ||| || ||||
Sbjct 539 CATCTGGTCCTGGTCAT-AGTAGAGTTATTACATTTGGAGCTGGAGATCTGAAGT-GGAG 596
Query 715 AAAGATAGAATGTTCAGTAAGACATGACATTGCGAGTGATGGGATATGCATCGATGGAGT 774
|| |||| |||||||| | ||||||| ||| |||||| ||| |||| ||| |||| ||
Sbjct 597 AAGGATAAAATGTTCATTGCGACATGATATTAAGAGTGAAGGGGTATGTATCAATGGGGT 656
Query 775 TGTGTATTACTTAGGTGATACGTC 798
| |||||||||||||||| |||||
Sbjct 657 TTTGTATTACTTAGGTGACACGTC 680
> AT3G57590.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:21330182-21331396 REVERSE LENGTH=1215
Length=1215
Score = 69.4 bits (37), Expect = 1e-10
Identities = 174/236 (74%), Gaps = 25/236 (11%)
Strand=Plus/Plus
Query 945 TTGAGTTGCGTATGTGGGTTCTAGAGGACAAGGAGAAA-ATGGAGTGG-TCAAAGTATGC 1002
|||||||||||||||||||||||||||| ||||| ||| | ||| | ||| ||||
Sbjct 812 TTGAGTTGCGTATGTGGGTTCTAGAGGATGCCGAGAAGCATGAA-TGGGTTAAA-TATGT 869
Query 1003 CTACAAGT-TGAGGGATGA-TAAATTC-TTGGCTAATT--ACGTTTCCA-TTGTTGGAGT 1056
|||| | || ||| || | || || ||| | | || |||| | ||| ||||||
Sbjct 870 GTACAC-TCTGCCGGA-GAATGAAGTCCTTGATTCCTGCGACTTTTC-AGTTGCTGGAGT 926
Query 1057 GAGTGCT-GCGGGTGAGATTGTTCTGTCAATGGC-TGATTACACGTCGAGACAACCGTTT 1114
|| | || | || ||| |||||| ||| ||| | || ||| || | | | ||||||
Sbjct 927 GACTACTAGAGG-TGATATTGTTTTGTGTATGAAAT-AT-ACATGT--A-A-A-CCGTTT 978
Query 1115 TATCTATTCTACTTCAATCCCGAAAGGAACACACTCCA-ATGTGTTGAAATTCAAG 1169
||| | ||||||||||||||||| |||||||| ||||| | | |||||||| ||||
Sbjct 979 TATGTGTTCTACTTCAATCCCGAGAGGAACACTCTCCAGA-GCGTTGAAATCCAAG 1033
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84286715055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5