BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473884 Length=1705 Score E Sequences producing significant alignments: (Bits) Value AT1G47340.1 | Symbols: | F-box and associated interaction doma... 1949 0.0 AT1G47350.1 | Symbols: | F-box associated ubiquitination effec... 843 0.0 AT2G16220.1 | Symbols: | F-box and associated interaction doma... 340 2e-92 AT2G16450.1 | Symbols: | F-box and associated interaction doma... 326 6e-88 AT3G57590.1 | Symbols: | F-box and associated interaction doma... 69.4 1e-10 > AT1G47340.1 | Symbols: | F-box and associated interaction domains-containing protein | chr1:17353847-17356533 REVERSE LENGTH=1695 Length=1695 Score = 1949 bits (1055), Expect = 0.0 Identities = 1292/1406 (92%), Gaps = 18/1406 (1%) Strand=Plus/Plus Query 1 AATGTTAAAAACAACTCTGAT---aaaaa-aaataatgttaaaaaaaaCT-CTGATAAAC 55 |||| |||||| ||||||||| ||||| |||||||| |||| |||||| || |||| Sbjct 5 AATGCTAAAAAAAACTCTGATAAAAAAAATAAATAATGCTAAAGAAAACTGCT-CCAAAC 63 Query 56 TCTCCAAAACGTCGCCGCTGCTCATCCGTCTCCGCCGTTGGTAACGTC-G--C-G--AAT 109 ||||||||||||||||| || |||||| || ||||||||| | |||| | | | || Sbjct 64 TCTCCAAAACGTCGCCGTTGTTCATCCTTCGCCGCCGTTGATCTCGTCGGATCAGCAAAC 123 Query 110 AGATCGATCATGGTTTCTGTTTCCCTCCCGAAAGAACTCATCCTCGAGATATTGTCA-AG 168 ||| || |||||||||| |||||||||||||||||||||||||||||||| ||| | || Sbjct 124 AGAACGTTCATGGTTTCAGTTTCCCTCCCGAAAGAACTCATCCTCGAGATTTTG-AAGAG 182 Query 169 ATTGCCTGCAAAGTCAGTTAAAAGGTTTCATTGTGTGTCGAAGCAATGGTCATCAATGCT 228 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 183 ATTGCCTGCAAAGTCAGTTAAGAGGTTTCATTGTGTGTCGAAGCAATGGGCATCAATGCT 242 Query 229 TAGTCGTCCACATTTCACAGAGTTGTTCCTGACCAGGTCCTCCTCTGCTCAGCCGCGTCT 288 |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 243 TAGTTGTCCACATTTCAGAGAGTTGTTCCTGACCAGGTCCTCATCTGCTCAGCCGCGTCT 302 Query 289 CTTATTCGCCATCGAAAAACGGAATCAGTGGAGCTTCTTCTCGTTGCCTCAGCATCTGAC 348 |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct 303 CTTATTCGCCATCGAAAAACATAATCAGTGGAGCTTGTTCTCGTTGCCTCAGCGTCTGAC 362 Query 349 TCCATATGAGAAGTCTTCGTCGTTGTCTCTTGTAGTAACCCCTGAATTTCACATGAAGTT 408 |||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct 363 TCCATATGAGAAGTCTTCTTCGTCGTCTGTTGTAGTAACCCCTGAATTTCACATGAAGTT 422 Query 409 CCCTCCAGATGGTATGCAGATCTATCCTCGTCATGACCGACGGTTTTCATGTGGCTATGC 468 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 423 CCCTCCAGATGGTATGCTGATCTATCCTCGTCATGACCGACGGTTTTCATTTGGCTATGC 482 Query 469 CTCTGGTTTGATGTATTTCTATGGTATGTGGATCAACGAG-AGGGCTTACGATGGAGTGC 527 |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| Sbjct 483 CTCTGGTTTGATGTATTTCTATGGTATGTGGATCAACGAGCA-CGATTACGATGGAGTGC 541 Query 528 CTGTGATATGTAACCCTATATCAGGACGGTATGCGACCTTACCGTTTCTGGAAAGGTACA 587 |||||||||| |||||| || ||||||||||||||| ||| || |||||||||||||| | Sbjct 542 CTGTGATATGCAACCCTTTAACAGGACGGTATGCGAGCTTGCCTTTTCTGGAAAGGTATA 601 Query 588 GAAAGGCGTTTAGCTTTTTCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCA 647 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 602 GAAAGGCGTTTAGCTTTTTCGGGTTTGATCCGATTGAGAAGCAGTACAAGGTGTTGTTCA 661 Query 648 TGGCTTACCCATCTGGTCCTGATCCTCATAGAGTTCTGACATTTGGAGCTGGTGAAATGA 707 |||||||||| ||||||||||||| ||||| |||||| ||||||||| |||| ||||||| Sbjct 662 TGGCTTACCCTTCTGGTCCTGATCATCATACAGTTCTAACATTTGGAACTGGAGAAATGA 721 Query 708 GTTGGAGAAAGATAGAATGTTCAGTAAGACATGACATTGCGAGTGATGGGATATGCATCG 767 |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||| Sbjct 722 GTTGGAGAAAGATAGAATGTTCTGTAAAACATGACATTGTGAGTGATGGGATATGTATCA 781 Query 768 ATGGAGTTGTGTATTACTTAGGTGATACGTCTGAGTTTATGACTGCTTTTGTGGTAGTTT 827 |||| || ||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 782 ATGGGGTCATGTATTACTTAGGCGATACGTCTGAGTTTATGACTGCTTTTGTGGTTGTTT 841 Query 828 GCTTTGATGTAAGGTCTGAGACATTCAGCTTTATTTACCCAGGAAGCTATTGTGAAGTGA 887 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 842 GCTTTGATGTGAGGTCTGAGACATTCAGCTTTATTTACCCTGGAAGCTATTGTGAAGTGA 901 Query 888 TAAACTACAAGGGAAAGTTGGGATTGGTTTTTTATGATGATTACGCTGATGATGCCATTG 947 |||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||| Sbjct 902 TAAACTACAAGGGAAAGTTGGGTTTGGTTTTTTGTGATGATTACACTGATGATGCTATTG 961 Query 948 AGTTGCGTATGTGGGTTCTAGAGGACAAGGAGAAAATGGAGTGGTCAAAGTATGCCTACA 1007 |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 962 AGTTGCGTCTGTGGGTTCTAGAGGACAAGGAGAAAATAGAGTGGTCAAAGTATGCCTACA 1021 Query 1008 AGTTGAGGGATGATAAATTCTTGGCTAATTACGTTTCCATTGTTGGAGTGAGTGCTGCGG 1067 |||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 1022 AGTTGAAGGATGAGAAATTCTCGGCTCATTACGTTTCCATTGTTGGAGTGAGTGCTGCGG 1081 Query 1068 GTGAGATTGTTCTGTCAATGGCTGATTACACGTCGAGACAACCGTTTTATCTATTCTACT 1127 ||||||||||||||||||||||||||| |||||| | ||||||||||||| | ||||||| Sbjct 1082 GTGAGATTGTTCTGTCAATGGCTGATTTCACGTCTAAACAACCGTTTTATGTGTTCTACT 1141 Query 1128 TCAATCCCGAAAGGAACACACTCCAATGTGTTGAAATTCAAGGCTTTGAAGAATACCATG 1187 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 1142 ACAATCCCGAAAGGAACACACTCCAATGTACTGAAATTCAAGGCTTTGAAGAACACCATG 1201 Query 1188 GAGTGTTCGACAAGCTTAGCAGAGTCCGCGTCTTTGTAGATGATTGCAGTAGTTTCTACC 1247 || ||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1202 GAACATTCGACAGGCGTAGCAGAGTCCGCGTCTTTGTAGATGATTGCAGTAGTTTCTACC 1261 Query 1248 GTTTTGCAGACCATGTTGAGTATCTAAATGTTGACGAGCCAAAGCTGCTGAAGTCAAAAA 1307 ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct 1262 GTTTTGCTGACCATGTTGAGTATCTGAATGTTGACGAACCAAAGCTGCTGAAGTCCAAAA 1321 Query 1308 TCTATGATGGTCCAAATGCGAAGGTagaa-gaagaagaggaagaagaagaagaagaagaa 1366 ||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||| Sbjct 1322 TCTATGATGGTCCAAATGCGAAGATAGAATGG-GAAGAGGAAGAAGAAGAAGATGAAGAT 1380 Query 1367 gaagaagaagaagaagaagaagaaga 1392 ||||| ||||| ||||||||||||| Sbjct 1381 GAAGATCAAGAAAAAGAAGAAGAAGA 1406 Score = 198 bits (107), Expect = 1e-49 Identities = 166/192 (86%), Gaps = 13/192 (7%) Strand=Plus/Plus Query 1415 gaagat-gaa-gatgaagatgaagaagaagaagatgaagatggagat---gaagaagaag 1469 |||||| ||| | ||||| |||||||||||||||||||||| |||| ||| |||||| Sbjct 1341 GAAGATAGAATG-GGAAGAGGAAGAAGAAGAAGATGAAGATGAAGATCAAGAAAAAGAAG 1399 Query 1470 aaTAA-ATCAATTGAGTTAGGGTAAAAGCAATGGGCATGTCTTTTGGTGCTTATCTATGA 1528 || || |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1400 AAGAAGATCAATGGAGTTAGGGTAAAAGCAATGGTCATGTCTTTTGGTGCTTATCTATGA 1459 Query 1529 GGTTACGTTCTTTAGTTGTGTAATAAGCGAAGTTTTTGTCTGGTAAATCCCATCTCTCTT 1588 |||||||||||||||||||| || | ||||||| | ||||||||| | |||||| | Sbjct 1460 GGTTACGTTCTTTAGTTGTG-AA---GTGAAGTTTA-G-CTGGTAAATTCTGTCTCTCAT 1513 Query 1589 AAGTACTAAATC 1600 |||||||||||| Sbjct 1514 AAGTACTAAATC 1525 > AT1G47350.1 | Symbols: | F-box associated ubiquitination effector family protein | chr1:17358447-17360722 REVERSE LENGTH=1587 Length=1587 Score = 843 bits (456), Expect = 0.0 Identities = 744/879 (85%), Gaps = 35/879 (4%) Strand=Plus/Plus Query 369 CGTT-GTCTCTTGTAGTAACCCCTGAATTTCACATGAAGTTCCCTCCAGATGGTATGCAG 427 |||| ||||| | ||| |||| |||||||||| ||||||||||||||||||||||||||| Sbjct 447 CGTTCGTCTC-T-TAGAAACCGCTGAATTTCATATGAAGTTCCCTCCAGATGGTATGCAG 504 Query 428 ATCTATCCTCGTCATGACCGACGGTTTTCATGTGGCTATGCCTCTGGTTTGATGTATTTC 487 |||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 505 ATCTATCCTCGTAACGACCGACGGTTTTCATGTGGCTATGCGTCTGGTATGATGTATTTC 564 Query 488 TATGGTATGTGGATCAACGAG-AGGGCTTACGATGGAGTGCCTGTGATATGTAACCCTAT 546 ||||||||| ||||||| ||| | | ||||||||||||||||||| ||||||||||||| Sbjct 565 TATGGTATGCGGATCAAAGAGGATGA-TTACGATGGAGTGCCTGTGCTATGTAACCCTAT 623 Query 547 ATCAGGACGGTATGCGACCTTACC-GTT-TCTGGAAAGGTACAGA-AAGGCGTTTAGCTT 603 | | |||| ||||||||||| || | | | || || ||| ||| ||| |||||||||| Sbjct 624 AACGGGACATTATGCGACCTTGCCTGCTAT-TGCAA-GGTTTAGACAAG-CGTTTAGCTT 680 Query 604 TTTCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCATG-----G-CTTACCC 657 |||||||| |||||||||||||||||| | |||||| ||||||||| | ||||||| Sbjct 681 TTTCGGGTATGATCCGATTGACAAGCAATTCAAGGTATTGTTCATGATCATGGCTTACCC 740 Query 658 ATCTGGTCCTGATCCTCATAGAGTTCTGACATTTGGA-GCTGGTGAAATGAGTTGGAGAA 716 || | ||||||||| ||||| |||||||| | ||||| | ||| |||||||||||||||| Sbjct 741 ATGTAGTCCTGATCATCATAAAGTTCTGAAACTTGGAAG-TGGAGAAATGAGTTGGAGAA 799 Query 717 AGAT-AGAATGTTCAGTAAGACATGACATTGCGAGTGATGGGATATGCATCGATGGAGTT 775 ||| | || || | |||||||||| ||| |||||| || ||||||||| |||| ||| Sbjct 800 -GATTAAAACGTACCTTAAGACATGAAATTATGAGTGAAGGTATATGCATCAATGGGGTT 858 Query 776 GTGTATTACTTAGGTGATACGTCTGAG-TTTATGACTGCTTTTGTGGTAGTTTGCTTTGA 834 ||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||| Sbjct 859 GTGTATTACTTGGGTGATACGTCTGAGGTTT-TGACTTCTTTTGTGGTAGTTTGCTTTGA 917 Query 835 TGTAAGGTCTGAGACATTCAGCTTTATTTACCCAGGAAGCTATTGTGAAGTGATAAACTA 894 ||| |||| |||||||||||||||| ||||||| ||||||||||||||| ||||||| || Sbjct 918 TGTGAGGTATGAGACATTCAGCTTTCTTTACCCTGGAAGCTATTGTGAACTGATAAATTA 977 Query 895 CAAGGGAAAGTTGGGATTGGTTTTTTATGATGATTACGCTGATGATGCCATTGAGTTGCG 954 ||| ||||||||||| |||||||||||||||||||||| || |||| ||||| ||||||| Sbjct 978 CAAAGGAAAGTTGGGTTTGGTTTTTTATGATGATTACGATGGTGATACCATTAAGTTGCG 1037 Query 955 TATGTGGGTTCTAGAGGACAAGGAGAAAA-TGGAGTGGTC-AAAGTATGCCTACAAGTTG 1012 | | ||||||||||||||| ||||||||| || | ||||| ||| ||||||||| |||| Sbjct 1038 TCTTTGGGTTCTAGAGGACGAGGAGAAAAATGAA-TGGTCGAAA-TATGCCTACGTGTTG 1095 Query 1013 AGGGATGATAAATTCTTGGCTAATTACGTTTCCATTGTTGGAGTGAGTGCTGCGGGTGAG 1072 ||||||||| ||| |||||| |||| ||||| | |||||||||| |||| ||||||| Sbjct 1096 TGGGATGATATATTTTTGGCTCATTATGTTTCGGTAGTTGGAGTGACTGCTACGGGTGAA 1155 Query 1073 ATTGTTCTGTCAATGGCTGATTACACGTCGA-GACAACCGTTTTATCTATTCTACT-TCA 1130 |||||| |||| ||||||||||| || || | | ||||| || ||| | ||||||| | | Sbjct 1156 ATTGTTTTGTCGATGGCTGATTATACATCTAAG-CAACCCTTCTATATTTTCTACTAT-A 1213 Query 1131 ATCCC-GAAAGGAACACACTCCAATGTGTTGAAATTCAAGGCTTTGAAGAATACCATGGA 1189 | ||| |||| ||| || || |||||||||||||||| ||| |||| ||||||||||| | Sbjct 1214 A-CCCTGAAATGAATACTCTTCAATGTGTTGAAATTCGAGGTTTTGGAGAATACCATGAA 1272 Query 1190 GTGTTCGA-CAAGCTTAGCAGAGTCCGCGTCTTTGTAGA 1227 | || || ||| || |||||| ||||||||||||| Sbjct 1273 GCGT-CGGGCAATAGGAGTAGAGTCTGCGTCTTTGTAGA 1310 > AT2G16220.1 | Symbols: | F-box and associated interaction domains-containing protein | chr2:7030155-7031378 REVERSE LENGTH=1224 Length=1224 Score = 340 bits (184), Expect = 2e-92 Identities = 819/1105 (74%), Gaps = 125/1105 (11%) Strand=Plus/Plus Query 138 CGAAAGAACTCATCCTCGAGATATTGTCAAGATTGCCTGCAAAGTCAGTTAAAAGGTTTC 197 |||| || |||||||| ||| | ||||||||||||||| ||||||||| ||||||| Sbjct 20 CGAATGATCTCATCCTGGAGGTTTTGTCAAGATTGCCTTTAAAGTCAGTCGCGAGGTTTC 79 Query 198 ATTGTGTGTCGAAGCAATGGTCATCAATGCTTAGTCGTCCACATTTCACAGAGTTGTTCC 257 |||| ||||| |||| ||| |||||||| || || ||||| |||||| ||||||||||| Sbjct 80 ATTGCGTGTCAAAGCGGTGGGCATCAATGTTTGGTAGTCCATATTTCAAAGAGTTGTTCC 139 Query 258 TGACCAGGTCCTCCTCTGCTCAGCCGCGTCTCTTATTCGCCATCG-A-AAAACGGAATCA 315 |||||| | ||||||||| |||| || |||||||| ||||||| | ||||||| | Sbjct 140 TGACCA-G--ATCCTCTGCTAAGCCACGCCTCTTATTTGCCATCGTACAAAACGG--TGT 194 Query 316 GTGGAGCTTCTTCTCGTTGCCTCAGCATCTGACTCCATATGAGAAGTCTTCGTCGTTGTC 375 |||||| ||||| || | ||| | || | | || |||||| ||||||| | | Sbjct 195 GTGGAGATTCTTTTC-AT--CTC--C-TC-G-GT---TA-GAGAAG---TCGTCGTCGAC 239 Query 376 TCTTGTAGTAACCCCTGAATTTCACATGAAGTTCCCTCCAGATGGTATGCAG-ATCTATC 434 |||||||| |||| |||||||||| |||||||| ||||| | | | | | ||||||| Sbjct 240 TCTTGTAGCAACCGCTGAATTTCATATGAAGTTATCTCCAAACAATCTAC-GAATCTATC 298 Query 435 CTCG-TCATGA--CC--GACGGTTTTC-ATGTGGCTATGCCTCTGGTTTGATGTATTTCT 488 | | | || | || || ||||| || ||| || |||||||| ||||| ||||| | Sbjct 299 AT-GATAAT-ACCCCAAGATATTTTTCAAT-TGGTTACGCCTCTGGCTTGATCTATTTAT 355 Query 489 ATGGTATG-TGGATCAACGAGAGGGCTTACGATGGAGTGCCTGTGATATGTAA-CCCTAT 546 |||| || | ||| || || ||| ||| | ||| |||||||||| ||| | Sbjct 356 ATGG--TGATCGAT--AC--GA-GGC-TAC-----A---CCTCTGATATGTAACCCCAAC 399 Query 547 ATCAGGACGGTATGCGACCTTACCGTTTCTG-GAAAGGTACAGAAAGGCGTTTAGCTTTT 605 | ||||| ||||| ||| |||||| | || | | || ||||||||||||||||||| Sbjct 400 A-CAGGAAGGTATACGATCTTACC-TAAGTGCTATACTTATAGAAAGGCGTTTAGCTTTT 457 Query 606 TCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCATGG-CTTACCCATCTGGT 664 |||||||||| || ||||||||||||||||||| |||| |||| || | ||||||||| Sbjct 458 TCGGGTTTGACCCAATTGACAAGCAGTACAAGGCATTGTCCATGATCT-ATCCATCTGGT 516 Query 665 CCTGATCCTCA-TAGAGTTCTGACATTTGGAGCTGGTGAAATGAGTTGGAGAAAGATAGA 723 |||| || || || | |||| || ||||||| ||| || |||| ||||| ||||||| | Sbjct 517 CCTGGTCA-CAGTAAAATTCTTACTTTTGGAGATGGGGATATGAATTGGAAAAAGATAAA 575 Query 724 ATGTTCA-GTAAGACATGACATTG-CGAGTGATGGGATATGCATCGATGGAGTTGTGTAT 781 || | | ||| |||||| ||| | ||| | |||||||||||| |||| ||| ||||| Sbjct 576 ATAT-CGTGTACTACATGATATTTAC-AGTCAAGGGATATGCATCAATGGTGTTTTGTAT 633 Query 782 TACTTAGGTGATACGTCTGAGTT----TA-TGA-C-TGCT-T----T-TG-T---G-GT- 822 ||||||||||| ||||| || || || ||| | || | | | || | | || Sbjct 634 TACTTAGGTGACACGTCAGA-TTGGGATAATGATCATGATGTAACGTCTGGTAATGTGTT 692 Query 823 AGTTTGCTTTGATGTAAGGTCTGAGACATTCAGCTTTATTTACCCAGGAAGCTATTGTGA 882 ||||||||||||| |||| || || | |||| ||||||| | || || | | || | Sbjct 693 AGTTTGCTTTGATTTAAGATCCGAAAGTTTCACCTTTATTGGCTTAG-AA--TGTGGTCA 749 Query 883 AGTGATAAACTACAAGGG-AAAGTTGGGAT-TGGTTTTTT---ATGATG---AT--T-AC 931 | |||||||||| ||||| ||| || | | | |||||| |||||| || | | Sbjct 750 ATTGATAAACTATAAGGGCAAA-TTAGC-TGTAATTTTTTGGGATGATGTGGATGATGAT 807 Query 932 GCTG--A----TGATGCCATTGA-GT--TGCGTATGTGGGTTCTAGAGGACAAGGAGAAA 982 | || | |||||||||||| | ||| | |||||||||||||||| |||||| Sbjct 808 GATGTGAAAGATGATGCCATTGATGAGATGCATGTGTGGGTTCTAGAGGATGTCGAGAAA 867 Query 983 ATGGAGTGGTC-AAAGTATGCCTACAAGTTG-AGGGATGATAAATTCTTG-GCTAATTAC 1039 | ||| ||||| ||| |||||||||| ||| | || |||||||| | | | | | Sbjct 868 AAGGAATGGTCGAAA-TATGCCTACAC-TTGGACCGAGGATAAATTATACCGTTC-TCAG 924 Query 1040 GTTTCCATTGTTGGAGTGAGTGCTGCGGGTGAGAT--TGTTCTGTCAATG-GCTGATTAC 1096 |||||| | |||||| ||| |||| ||||||| || |||| | || ||| || | || Sbjct 925 GTTTCCGTGGTTGGAATGACTGCTTCGGGTGAAATAGTGTT-T-TCGATGCGCA-AGTAT 981 Query 1097 ACGTC-GAGACAACCGTTTTATCTATT-CTACTTCAATCCCGAAAGGAACACA-CTCCAA 1153 || || || ||||||||||||| | || ||||||||||||||||||||||| | |||| | Sbjct 982 ACATCTGA-ACAACCGTTTTATGT-TTACTACTTCAATCCCGAAAGGAACA-ATCTCCGA 1038 Query 1154 TGTGTTGAAATTCAAGGCTTTGAAG 1178 |||||||||| ||||| ||||||| Sbjct 1039 CGTGTTGAAATCCAAGGTTTTGAAG 1063 > AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing protein | chr2:7131520-7132803 REVERSE LENGTH=1284 Length=1284 Score = 326 bits (176), Expect = 6e-88 Identities = 525/684 (77%), Gaps = 62/684 (9%) Strand=Plus/Plus Query 146 CTCATCCTCGAGATATTGTCAAGATTGCCTGCAAAGTCAGTTAAAAGGTTTCATTGTGTG 205 |||||| | ||||||||||| |||||||||||||| ||||| ||||||||||| ||| Sbjct 28 CTCATCTTGGAGATATTGTCGAGATTGCCTGCAAAATCAGTCCGGAGGTTTCATTGCGTG 87 Query 206 TCGAAGCAATGGTCATCAATGCTTAGTCGTCCACATTTCACA-GAGTTGTTCCTGACCAG 264 ||||||| |||| ||||||| || || ||||| |||||| | ||||||||||||||||| Sbjct 88 TCGAAGCGATGGGCATCAATTTTTGGTAGTCCATATTTCA-AGGAGTTGTTCCTGACCAG 146 Query 265 GTCCTCCTCTG-CTCAGCCGCGTCTCTTATTCGCCAT--C---GAAA---AAC---G-G- 310 | ||||| | || ||||||| |||||||||||||| | |||| ||| | | Sbjct 147 G---TCCTC-GACTAAGCCGCGCCTCTTATTCGCCATCGCAGAGAAAGGCAACAAAGAGA 202 Query 311 -A-A---TCAGTGGAGCTTCTTCTCGTTGCCTCAGCATCTGACTCCATATGAGAAGTCTT 365 | | | |||||| |||||||||| ||| |||| | || |||||||||||| || Sbjct 203 AAGACTGTGTGTGGAGGTTCTTCTCGTCGCCACAGCTTGAGAATCCATATGAGAAATC-- 260 Query 366 CGTCGTTGTCTCTTGTAGTAACCCCTGAATTTCACATGAAG-TTCCCTCCAGATGGTATG 424 | || | | ||||||||| |||| |||||||||| || || ||| ||||||| | | Sbjct 261 C-TCATCGACTCTTGTAGCAACCGCTGAATTTCATGTG-AGATTCTCTCCAGACAATCTA 318 Query 425 CAGATCTATCCTCGTCATGACC---GACGGTTTTC-ATGTGGCTATGCCTCTGGTTTGAT 480 | ||||| || | | |||||| | ||||| || ||| ||||||| ||| ||||| Sbjct 319 CTGATCTGTCATTATTATGACCTAAAATATTTTTCAAT-TGGTTATGCCTTTGGCTTGAT 377 Query 481 GTATTTCTATGGTATGTGGATCAACGAG-AGGGCTTACGATGGAGTGCCTGTGATATGTA 539 ||| ||||||||| ||| | | | |||| | | || ||| | ||||||| Sbjct 378 CTATATCTATGGTA-----ATCGA-G-GCCGGGC-T---A--GA---CCTCTAATATGTA 421 Query 540 ACCCTA-TATCAGGACGGTATGCGACCTTACCGT-TTCTGG-AAAGGTACAGAAAGGCGT 596 |||| | || ||||||||||||| | |||||| | || || | | ||||||||||||| Sbjct 422 ACCCCACTA-CAGGACGGTATGCCATCTTACC-TAATC-GGTATACTTACAGAAAGGCGT 478 Query 597 TTAGCTTTTTCGGGTTTGATCCGATTGACAAGCAGTACAAGGTGTTGTTCATGGCTTACC 656 ||||||||||||||||||| || ||||||||||| ||||||| |||| ||||| ||| | Sbjct 479 TTAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGCATTGTCCATGGTTTATC 538 Query 657 CATCTGGTCCTGATCCTCA-TAGAGTTCTGACATTTGGAGCTGGTGAAATGA-GTTGGAG 714 |||||||||||| || | | ||||||| | |||||||||||||| || ||| || |||| Sbjct 539 CATCTGGTCCTGGTCAT-AGTAGAGTTATTACATTTGGAGCTGGAGATCTGAAGT-GGAG 596 Query 715 AAAGATAGAATGTTCAGTAAGACATGACATTGCGAGTGATGGGATATGCATCGATGGAGT 774 || |||| |||||||| | ||||||| ||| |||||| ||| |||| ||| |||| || Sbjct 597 AAGGATAAAATGTTCATTGCGACATGATATTAAGAGTGAAGGGGTATGTATCAATGGGGT 656 Query 775 TGTGTATTACTTAGGTGATACGTC 798 | |||||||||||||||| ||||| Sbjct 657 TTTGTATTACTTAGGTGACACGTC 680 > AT3G57590.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:21330182-21331396 REVERSE LENGTH=1215 Length=1215 Score = 69.4 bits (37), Expect = 1e-10 Identities = 174/236 (74%), Gaps = 25/236 (11%) Strand=Plus/Plus Query 945 TTGAGTTGCGTATGTGGGTTCTAGAGGACAAGGAGAAA-ATGGAGTGG-TCAAAGTATGC 1002 |||||||||||||||||||||||||||| ||||| ||| | ||| | ||| |||| Sbjct 812 TTGAGTTGCGTATGTGGGTTCTAGAGGATGCCGAGAAGCATGAA-TGGGTTAAA-TATGT 869 Query 1003 CTACAAGT-TGAGGGATGA-TAAATTC-TTGGCTAATT--ACGTTTCCA-TTGTTGGAGT 1056 |||| | || ||| || | || || ||| | | || |||| | ||| |||||| Sbjct 870 GTACAC-TCTGCCGGA-GAATGAAGTCCTTGATTCCTGCGACTTTTC-AGTTGCTGGAGT 926 Query 1057 GAGTGCT-GCGGGTGAGATTGTTCTGTCAATGGC-TGATTACACGTCGAGACAACCGTTT 1114 || | || | || ||| |||||| ||| ||| | || ||| || | | | |||||| Sbjct 927 GACTACTAGAGG-TGATATTGTTTTGTGTATGAAAT-AT-ACATGT--A-A-A-CCGTTT 978 Query 1115 TATCTATTCTACTTCAATCCCGAAAGGAACACACTCCA-ATGTGTTGAAATTCAAG 1169 ||| | ||||||||||||||||| |||||||| ||||| | | |||||||| |||| Sbjct 979 TATGTGTTCTACTTCAATCCCGAGAGGAACACTCTCCAGA-GCGTTGAAATCCAAG 1033 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84286715055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5