BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473917
Length=3114
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 | ch... 4253 0.0
AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | ch... 1297 0.0
> AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 |
chr2:8278881-8286445 FORWARD LENGTH=3812
Length=3812
Score = 4253 bits (2303), Expect = 0.0
Identities = 2878/3148 (91%), Gaps = 70/3148 (2%)
Strand=Plus/Plus
Query 5 AGGCGACAGCAGTAATGCAGTCTCTGATGAGCTTAGCTCCACAGAAGGCAATAATAGCAG 64
||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 672 AGGCGACCTCGGTAATGCAGTCTCTGATGAGCTTAGCTCCACAAAAGGCTATAATAGCAG 731
Query 65 AGACTGGTGAAGAAGTTGAAGTAGATGAGGTTAAGATTAG-CACAGTTGTAGCGGTTAAA 123
||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||
Sbjct 732 AGACTGGTGAAGAAGTTGAAGTAGATGAGGTTAAGGTT-GATACAGTTGTAGCAGTTAAA 790
Query 124 GCTGGTGAAACCATACCAATTGATGGAATTGTGGTGGATGGAAACTGTGAAGTAGACGAG 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 791 GCTGGTGAAACCATACCAATTGATGGAATTGTGGTGGATGGAAACTGTGAGGTAGACGAG 850
Query 184 AAAACCTTAACCGGCGAAGCATTTCCTGTACCTAAACAGAGAGATTCTACGGTTTGGGCT 243
||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 851 AAAACCTTAACGGGCGAAGCATTTCCTGTGCCTAAACAGAGAGATTCTACCGTTTGGGCT 910
Query 244 GGAACTATCAATCTAAATGGTTACATAAGTGTGAAAACAACTTCTTTAGCGGGTGATTGC 303
||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 911 GGAACCATTAATCTAAATGGTTACATATGTGTGAAAACAACTTCTTTAGCGGGTGATTGT 970
Query 304 GTGGTTGCGAAGATGGCTAAGTTAGTAGAAGAAGCTCAGAGCAGTAAAACCAAATCCCAA 363
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 971 GTGGTTGCGAAAATGGCTAAGCTAGTAGAAGAAGCTCAGAGCAGTAAAACCAAATCTCAG 1030
Query 364 AGACTAATAGACAAATGTTCTCAGTACTATACTCCAGCAATCATCGTAGTATCAGCTTGC 423
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1031 AGACTAATAGACAAATGTTCTCAGTACTATACTCCAGCAATCATCTTAGTATCAGCTTGC 1090
Query 424 GTCGCCATTGTCCCGGTTATTATGAAGGTCCACAACCTTAAACATTGGTTCCACCTGGCA 483
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1091 GTTGCCATTGTCCCGGTTATAATGAAGGTCCACAACCTTAAACATTGGTTCCACCTAGCA 1150
Query 484 TTAGTTGTGTTAGTCAGTGGCTGTCCCTGTGGTCTTATCCTCTCTACACCAGTTGCTACT 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1151 TTAGTTGTGTTAGTCAGTGGTTGTCCCTGTGGTCTTATCCTCTCTACACCAGTTGCTACT 1210
Query 544 TTCTGTGCACTTACTAAAGCAGCAACTTCCGGGCTTCTGATCAAAAGTGCTGATTATCTG 603
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1211 TTCTGTGCACTTACTAAAGCGGCAACTTCAGGGCTTCTGATCAAAAGTGCTGATTATCTT 1270
Query 604 GACACTCTCTCAAAGATGAAGATCGCTGCTTTCGACAAAACCGGGACTATTACTAGAGGA 663
||||| ||||||||||| ||||| | ||||||||| ||||| ||||||||||| ||||||
Sbjct 1271 GACACACTCTCAAAGATCAAGATTGTTGCTTTCGATAAAACTGGGACTATTACAAGAGGA 1330
Query 664 GAGTTCATTGTCATAGATTTCAAGTCACTCTCTAGAGATATAACCCTACGTAGCTTGCTT 723
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1331 GAGTTCATTGTCATAGATTTCAAGTCACTCTCTAGAGATATAAACCTACGCAGCTTGCTT 1390
Query 724 TACTGGGTATCAAGTGTTGAAAGCAAATCAAGTCATCCAATGGCTGCAACAATCGTGGAC 783
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1391 TACTGGGTATCAAGTGTTGAAAGCAAATCAAGTCATCCAATGGCAGCAACAATCGTGGAT 1450
Query 784 TACGCGAAATCCATTTCTGTTGAGCCTAGGCCTGAAGAGGTAGAGGACTACCAGAATTTT 843
|| || ||||| |||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct 1451 TATGCAAAATCTGTTTCTGTTGAGCCTAGGCCTGAAGAGGTTGAGGATTACCAGAACTTT 1510
Query 844 CCAGGTGAAGGAATCTACGGGAAGATTGATGGGAACGATATCTACATCGGGAACAAAAGG 903
|||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||| |
Sbjct 1511 CCAGGTGAAGGAATCTACGGGAAGATTGATGGTAACGATATCTTCATTGGGAACAAAAAG 1570
Query 904 ATTGCTTCTCGAGCTGGTTGTTCAACAGTTCCAGAGATTGAAGTTGATACAAAAGGTGGA 963
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1571 ATAGCTTCTCGAGCTGGTTGTTCAACAGTTCCAGAGATTGAAGTTGATACCAAAGGCGGG 1630
Query 964 AAGACTGTTGGATACGTCTATGTAGGTGAAAGACTAGCTGGAGTTTTCAATCTTTCTGAT 1023
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1631 AAGACTGTTGGATACGTCTATGTAGGTGAAAGACTAGCTGGATTTTTCAATCTTTCTGAT 1690
Query 1024 GCTTGTAGATCAGGTGTATCTCAAGCAATGAAAGAACTAAAATCTCTAGGAATCAAAACC 1083
||||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||||
Sbjct 1691 GCTTGTAGATCTGGTGTTTCTCAAGCAATGGCAGAACTGAAATCTCTAGGAATCAAAACC 1750
Query 1084 GCAATGCTAACGGGAGATAGTCAAGCTGCGGCAATGCATGCTCAAGAACAACTAGGGAAT 1143
||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||
Sbjct 1751 GCAATGCTAACGGGAGATAATCAAGCCGCGGCAATGCATGCTCAAGAACAGCTAGGGAAT 1810
Query 1144 GTTTTAGATGTTGTACATGGAGAACTTCTTCCTGAAGATAAATCCAAAATCATACAAGAG 1203
||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||||||
Sbjct 1811 GTTTTAGATGTTGTACATGGAGATCTTCTTCCAGAAGATAAGTCCAGAATCATACAAGAG 1870
Query 1204 TTTAAGAAAGAAGGACCAACCGCAATGGTAGGGGACGGTGTGAATGATGCACCAGCTTTA 1263
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1871 TTTAAGAAAGAGGGACCAACCGCAATGGTAGGGGACGGTGTGAATGATGCACCAGCTTTA 1930
Query 1264 GCTATAGCTGATATTGGTATCTCCATGGGGATTTCTGGCTCTGCTCTTGCAACACAGACT 1323
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1931 GCTACAGCTGATATTGGTATCTCCATGGGAATTTCTGGCTCTGCTCTTGCAACACAAACT 1990
Query 1324 GGTCATATTATTCTGATGTCTAATGACATAAGAAGGATACCACAAGCGGTGAAGCTAGCG 1383
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1991 GGTAATATTATTCTGATGTCTAATGATATAAGAAGGATACCACAAGCGGTGAAGCTAGCG 2050
Query 1384 AGAAGAGCTCGGCGCAAAGTTATTGAAAACGTGTGTCTTTCCATCATTTTAAAAGCAGGA 1443
|||||||| || ||||||||| |||||||||||||||| || ||||||||||||||||||
Sbjct 2051 AGAAGAGCACGACGCAAAGTTGTTGAAAACGTGTGTCTATCGATCATTTTAAAAGCAGGA 2110
Query 1444 ATACTGGCTTTGGCATTTGCTGGTCATCCTTTGATTTGGGCAGCGGTTCTTGTTGACGTA 1503
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 2111 ATACTCGCTTTGGCATTTGCTGGTCATCCTTTGATTTGGGCTGCGGTTCTTGTTGATGTA 2170
Query 1504 GGAACTTGTTTGCTTGTGATTCTCAATAGTATGTTGCTGCTGCGAGAGAAGAAAAAGATT 1563
|| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2171 GGGACTTGTCTGCTTGTGATTTTCAATAGTATGTTGCTGCTGCGAGAGAAGAAAAAGATT 2230
Query 1564 GGGAACAAAAAGTGTTACAGGGCTTCAACATCTATGTTGAATGGTAGGAAACTCGAAGGC 1623
|||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||
Sbjct 2231 GGGAACAAAAAGTGTTACAGGGCTTCTACATCTAAGTTGAATGGTAGGAAACTTGAAGGC 2290
Query 1624 GATGATGATGATGCTGTGGACTTAGAAGCAGGCTTGTTAACAAAAAGCGGGAATGGTCAA 1683
||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2291 GATGATGATTATGTTGTGGACTTAGAAGCAGGCTTGTTAACAAAGAGCGGGAATGGTCAA 2350
Query 1684 TGTAAATCAAGCTGTTGTGGAGATAAGAAAAATCAAGAGAAGGTTGTGATGATGAAACCA 1743
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2351 TGCAAATCAAGCTGTTGTGGAGATAAGAAAAATCAAGAGAATGTTGTGATGATGAAACCA 2410
Query 1744 AGTAGTAAAACCAGTTCTGATCATTCTCACCCTGGTTGTTGTGGCGATAAGAAGCAAGGC 1803
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2411 AGTAGTAAAACCAGTTCTGATCATTCTCACCCTGGTTGTTGTGGCGATAAGAAGGAAGAA 2470
Query 1804 AATGTGAAGCCGCTTGTGAGAGATGGCTGTTGCAGTGAGGAAACTAGGAAAGCAGTGGGA 1863
|| |||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||
Sbjct 2471 AAAGTGAAGCCGCTTGTGAAAGATGGCTGTTGCAGTGAGAAAACTAGGAAATCAGAGGGA 2530
Query 1864 GACATGGTTTCATTGAGCTCATGTAAGAAGTCTAGTCATGTCAAACATGACCTGAAAATG 1923
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2531 GATATGGTTTCATTGAGCTCATGTAAGAAGTCTAGTCATGTCAAACATGACCTGAAAATG 2590
Query 1924 AAAGGTGGTTCAGGTTGTTGTGCTAACAAAAGTGAGAA-GGTAGAGGAAGTAGTGGCAAA 1982
||||||||||||||||||||||||| ||||| |||||| || | ||||||||||||||||
Sbjct 2591 AAAGGTGGTTCAGGTTGTTGTGCTAGCAAAAATGAGAAAGGGA-AGGAAGTAGTGGCAAA 2649
Query 1983 GAGCTGTTGTGAGAAACCAAAACAGCAAATGGAGAGTGCTGGAGACTGCAAATCTAGCCA 2042
|||||||||||||||||| |||||||| ||||||||| |||||||||||| ||| | ||
Sbjct 2650 GAGCTGTTGTGAGAAACCCAAACAGCAGGTGGAGAGTGTTGGAGACTGCAAGTCTGGTCA 2709
Query 2043 TTGCGAGGAGAAGAAGCATGCTGAGGAAATTGTTGTCCCGGTGCAGATTATTCCTCAGGC 2102
||||||| |||||||||| ||||| || |||||||||||||||||||||||| ||| ||
Sbjct 2710 TTGCGAGAAGAAGAAGCAAGCTGAAGACATTGTTGTCCCGGTGCAGATTATTGGTCATGC 2769
Query 2103 ATTAACTGGTT-TGGAAATAGAGTTGCAGAGAAAGGAACCCTGCAAAACAAGCTGTTGCG 2161
|||||| | | |||| || |||||||||| ||||||| ||||||||||||||||||| |
Sbjct 2770 ATTAAC-GCATGTGGAGATCGAGTTGCAGACAAAGGAAACCTGCAAAACAAGCTGTTGTG 2828
Query 2162 ACAATAAAGAGAAGAAGGTTAAGGAAATAGGTTTGTTGCTTGCTAGTGAGGACAAATCTT 2221
||| |||||| || | ||||||||| | ||||||| ||||| |||||||| ||| | |||
Sbjct 2829 ACAGTAAAGA-AA-A-GGTTAAGGAGACAGGTTTGCTGCTTTCTAGTGAGAACACACCTT 2885
Query 2222 ACCTGGAGCA-GGAAGTGCTGATTAAAGATGAAGGAAACTGCAAGTCTGGCTGCGAGAAC 2280
|||||||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2886 ACCTGGAGAAAGGA-GTGCTGATTAAAGATGAAGGAAACTGCAAGTCTGGCAGCGAGAAC 2944
Query 2281 AAGGGGACAGTGACACAAAGGTGCCATGAGAAGTGCTGCAGCGATGAAAAACAAACTGGG 2340
| ||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||
Sbjct 2945 ATGGGGACAGTGAAACAAAGCTGCCATGAGAAGGGCTGCAGCGATGAAAAACAAACCGGG 3004
Query 2341 GAAATAACTCTGGCTTCTGAGGAAGAGACAGACGATCAAGATTGCTTCTCGGGATGTTGT 2400
||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||
Sbjct 3005 GAAATAACTCTTGCTTCGGAGGAAGAGACAGATGATCAAGATTGCTCCTCGGGATGTTGT 3064
Query 2401 GTGAACGAGGGGACAGTGAAACAAAGCTTCCATGAGAAGAAGCATGCTGTGTTGGTGGAG 2460
||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 3065 GTGAACGAGGGAACAGTGAAACAAAGCTTCGATGAGAAGAAGCATTCTGTGTTGGTGGAG 3124
Query 2461 AAGGAAGGTTTGGACATGGAAACTGGTGTATGTTGTGATGATCTCAAGTTGGTTTGTTGT 2520
||||||||||||||||||||||||||| | |||||||||| | |||| |||||||||||
Sbjct 3125 AAGGAAGGTTTGGACATGGAAACTGGTTTCTGTTGTGATG--C-CAAGCTGGTTTGTTGT 3181
Query 2521 GGAAACACAGAAGGGGAAGTGGAGGAGCATTGT-GATCTGGAGATAAAGGATGAAGGACA 2579
|||||||||||||| |||||| ||||||| ||| | ||||||||||||| | |||| |||
Sbjct 3182 GGAAACACAGAAGGTGAAGTGAAGGAGCAATGTCG-TCTGGAGATAAAGAAAGAAGAACA 3240
Query 2580 TTGCAAGTCTGGTTGCTGCAACGATGAAA-AGCAAACAACGGA-AATT-ACTCTGGCTTC 2636
||||||||||||||||||| ||| |||| | ||||| |||| || | ||||||| |||
Sbjct 3241 TTGCAAGTCTGGTTGCTGCGGCGAGGAAATA-CAAAC--CGGAGAAATCACTCTGGTTTC 3297
Query 2637 AGAGGAAGAGACAGACAGCATGGATTGTTCCTCGG------------A-A--GAAG---T 2678
||||||||||||||| |||| | |||||||| ||| | | |||| |
Sbjct 3298 AGAGGAAGAGACAGAGAGCACGAATTGTTCCACGGGTTGTTGTGTGGACAAAGAAGAAGT 3357
Query 2679 GACAAAAATCTGTGGTGAGAAGCCTGTTAGCTTGGTGCTATCTGACTTGCAAGTGAAGAA 2738
|||| ||| |||| ||||||||||| |||||||||| |||| | |||| ||||||||||
Sbjct 3358 GACACAAACCTGTCATGAGAAGCCTGCTAGCTTGGTGGTATCAGGCTTGGAAGTGAAGAA 3417
Query 2739 GGATGAGCAATGTGAGAGCTCAAACAGAGCCGTTAAG-TCAGAGACCTGTTGCAAAGTGA 2797
||||||||| |||||||||||| |||||||||| ||| | ||||||||||||||||||||
Sbjct 3418 GGATGAGCATTGTGAGAGCTCACACAGAGCCGTCAAGGT-AGAGACCTGTTGCAAAGTGA 3476
Query 2798 AGATTCCAGAGGCTTGTGCACCGGAATGTAAGGAAAAAGAGAAGCGTCACAGTGGTAAAA 2857
|||||||||||||||| ||| | |||||| ||| | || ||||||||||||||||||||
Sbjct 3477 AGATTCCAGAGGCTTGCGCATCAAAATGTAGGGACAGAGCGAAGCGTCACAGTGGTAAAA 3536
Query 2858 GCTGTTGCAGGAGTTATGCAAAAGAGTTTTGCAGccaccgccaccatcatcaccaccacc 2917
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 3537 GCTGTTGCAGGAGTTATGCAAAAGAGTTATGCAGCCACCGCCATCATCATCACCACCACC 3596
Query 2918 accaccaccaccaccaccaTGTGAGTGCTTGATGGAGACTGCGATTGAATAGCTTAAACT 2977
||||||| ||||| ||||||||||||||||||| || |||||||| ||||||||
Sbjct 3597 ACCACCATCACCA------TGTGAGTGCTTGATGGAGATTG--ATTGAATAACTTAAACT 3648
Query 2978 CTTG---CATCCATCTATTCACACAACGTGTCGTCT--T------AATGGCGAAATTAAA 3026
|||| |||||||||||||||| |||| | |||| | |||| |||||| |||
Sbjct 3649 CTTGATGCATCCATCTATTCACATTACGTTTAGTCTCATTCCGTGAATGCCGAAAT-AAA 3707
Query 3027 AAACATAGATAAATTTGTTCCAGCAAAGGCAGTAGTATTAGACTAAGCAACTGTGTTATT 3086
||||| | | | | ||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 3708 AAACA-A-A-A--T--GTTCCAGCAAAGGCAGTT-TATTAGATTAAGCAACTGTGTTATT 3759
Query 3087 TATAAAGACAATGCTAGTGATCCTTTTT 3114
|||||||||||||||||||| |||||
Sbjct 3760 CATAAAGACAATGCTAGTGATTTTTTTT 3787
> AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 |
chr4:14720241-14724584 REVERSE LENGTH=2875
Length=2875
Score = 1297 bits (702), Expect = 0.0
Identities = 1283/1560 (82%), Gaps = 53/1560 (3%)
Strand=Plus/Plus
Query 13 GCAGTAATGCAGTCTCTGATGAGCTTAGCTCCACAGAAGGCAATAATAGCAGAGACTGGT 72
||||| ||||||||| ||||||| ||||||||||| ||||| | || |||||||||||
Sbjct 554 GCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCCGTGATTGCAGAGACTGGA 613
Query 73 GAAGAAGTTGAAGTAGATGAGGTTAAGATTAGCACAGTTGTAGCGGTTAAAGCTGGTGAA 132
|||||||||||||| ||||| | |||| || ||||||| |||| || ||||||||||||
Sbjct 614 GAAGAAGTTGAAGTGGATGAACTCAAGACTAACACAGTTATAGCTGTCAAAGCTGGTGAA 673
Query 133 ACCATACCAATTGATGGAATTGTGGTGGATGGAAACTGTGAAGTAGACGAGAAAACCTTA 192
|||||||||||||||||| |||| || ||||||||||||||||| || |||||||| ||
Sbjct 674 ACCATACCAATTGATGGAGTTGTTGTTGATGGAAACTGTGAAGTTGATGAGAAAACTTTG 733
Query 193 ACCGGCGAAGCATTTCCTGTACCTAAACAGAGAGATTCTACGGTTTGGGCTGGAACTATC 252
||||| |||||||| || || ||||||| || |||||| ||||||||||||||||| |||
Sbjct 734 ACCGGTGAAGCATTCCCCGTGCCTAAACTGAAAGATTCGACGGTTTGGGCTGGAACCATC 793
Query 253 AATCTAAATGGTTACATAAGTGTGAAAACAACTTCTTTAGCGG-GTGATTGCGTGGTTGC 311
||||||||||||||||||| |||||| || ||| || |||| | | ||||||||||||||
Sbjct 794 AATCTAAATGGTTACATAACTGTGAACACCACTGCTCTAGCTGAG-GATTGCGTGGTTGC 852
Query 312 GAAGATGGCTAAG-TTAGTAGAAGAAGCTCAGAGCAGTAAAACC-AAATCCCAAAGACTA 369
||||||||| || || |||||||||||||||| ||| |||||| ||| | || ||| |
Sbjct 853 GAAGATGGCAAAACTT-GTAGAAGAAGCTCAGAACAGCAAAACCGAAA-CTCAGAGATTT 910
Query 370 ATAGACAAATGTTCTCA-GTACTATACTCCAGCAATCATCGT-AGTATCAG-CT-TGC-G 424
||||| |||||||| || ||||||||||||||| |||||| | | ||||| || | |
Sbjct 911 ATAGATAAATGTTC-CAAGTACTATACTCCAGCGATCATCCTGA-TATCAATCTGTTTTG 968
Query 425 TCGCCATTGTCCCGGTT--ATTATGAAGGTCCACAACCTTAAACATTGG-TTCCACCTGG 481
| || || ||| || ||| |||||| |||||||| ||||||||| ||| || | |
Sbjct 969 TGGCTAT---CCCATTTGCATT--GAAGGTTCACAACCTGAAACATTGGGTTC-ACTTAG 1022
Query 482 CATTAGTTGTGTTAGTCAGTGGCT-GTCCCTGTGGTCTTATCCTCTCTACACCAGTTGCT 540
|| ||||||||||||| |||| || |||| ||||| ||||||||||| |||||||| ||
Sbjct 1023 CACTAGTTGTGTTAGTAAGTG-CTTGTCCTTGTGGACTTATCCTCTCCACACCAGTAGCC 1081
Query 541 ACTTTCTGTGCACTTACTAAAG-CAGCAACTTCCGGGCTTCTGATCAAAAGTGCTGATTA 599
|||||||||||||| || |||| |||| || || || ||| |||||||| | ||||||||
Sbjct 1082 ACTTTCTGTGCACTCAC-AAAGGCAGCCACATCAGGACTTTTGATCAAAGGAGCTGATTA 1140
Query 600 TCTGGACACTCTCT--CAAAGATGAAGATCGCTGCTTTCGACAAAACCGGGACTATTACT 657
|| || || || | | ||||| ||||| | |||||| || |||||||||||||| |||
Sbjct 1141 CCTTGAAAC-CT-TAGCCAAGATCAAGATTGTTGCTTTTGATAAAACCGGGACTATCACT 1198
Query 658 AGAGGAGAGTTCATTGTCATAGATTTCAAGTCACTCTCTAGA-GATATAACCCTAC-GTA 715
||||| |||||||| ||||| |||||| ||||||| ||| || ||||||| ||| | | |
Sbjct 1199 AGAGGTGAGTTCATCGTCATGGATTTCCAGTCACTTTCT-GAAGATATAAGCCTGCAG-A 1256
Query 716 G-CTTGCTTTACTGGGTATCAAGTGTTGAAAGCAAATCAAGTCATCCAATGGCTGCAACA 774
| || |||||||||||||||||| ||| ||||| ||||| |||||||||||||| ||
Sbjct 1257 GTCT-GCTTTACTGGGTATCAAGCACTGAGAGCAAGTCAAGCCATCCAATGGCTGCTGCA 1315
Query 775 ATCGTGGACTACGCGAA-ATCCATTTCTGTTGAGCCTAGGCCTGAAGAGGTAGAGGACTA 833
| |||||||| || || ||| | |||||||| |||| |||||||| ||| || |||||
Sbjct 1316 GTTGTGGACTATGC-AAGATCTGTCTCTGTTGAACCTAAGCCTGAAGCGGTCGAAGACTA 1374
Query 834 CCAGAATTTTCCAGGTGAAGGAATCTACGGGAAGATTGATGGGAACGATA-TCTACATCG 892
|||||| |||||||| ||||| || || |||||||||||||| || || | |||| ||||
Sbjct 1375 CCAGAACTTTCCAGGAGAAGGGATTTATGGGAAGATTGATGGTAAAGA-AGTCTATATCG 1433
Query 893 GGAACAAAAGGATTGCTTCTCGAGCTGGTTGTTCAACAGTTCCAGAGATTGAAGTTGATA 952
| |||||||||||||||||| ||||||| |||| | |||||||||| ||||| |||||||
Sbjct 1434 GTAACAAAAGGATTGCTTCTAGAGCTGGGTGTTTATCAGTTCCAGATATTGATGTTGATA 1493
Query 953 CAAAAGGTGGAAAGACTGTTGGATACGTCTATGTAGGTGAAAGACTAGCTGGAGTTTTCA 1012
| ||||| |||||||| ||||||| || ||||| || |||| ||||||||| |||||||
Sbjct 1494 CTAAAGGAGGAAAGACAATTGGATATGTATATGTTGGAGAAACACTAGCTGGTGTTTTCA 1553
Query 1013 ATCTTTCTGATGCTTGTAGATCAGGTGTATCTCAAGCAATGAAAGAACTAAAATC-TCTA 1071
|||| || |||||||||||||| |||||| ||||||| ||||||||||| ||||| | |
Sbjct 1554 ATCTCTCAGATGCTTGTAGATCTGGTGTAGCTCAAGCCATGAAAGAACTGAAATCGT-TG 1612
Query 1072 GGAATCAAAACCGCAATGCTAACGGGAGATAGTCAAGCTGCGGCAATGCATGCTCAAGAA 1131
||||| || | |||||||| || ||||||| ||| || || ||||||||||||||||||
Sbjct 1613 GGAATTAAGATTGCAATGCTTACCGGAGATAATCATGCCGCTGCAATGCATGCTCAAGAA 1672
Query 1132 CAACTAGGGAATGTTTTAGATGTTGT-ACATGGAGAACTTCTTCCTGAAGATAAATCCAA 1190
|| ||||| |||| | | ||| |||| | | | ||| |||||||| ||||||||||| |
Sbjct 1673 CAGCTAGGAAATGCTATGGATATTGTTAGA-GCAGAGCTTCTTCCAGAAGATAAATCTGA 1731
Query 1191 AATCATACAAGAGTTTAAGA-A-A-GAAGGACCAACCGCAATGGTAGGGGACGGTGT-GA 1246
||||||| || |||| |||| | | ||||| ||||| || |||||||||||||| || ||
Sbjct 1732 AATCATAAAACAGTTAAAGAGAGAAGAAGGGCCAACGGCTATGGTAGGGGACGG-GTTGA 1790
Query 1247 ATGATGCACCAGCTTTAGCTATAGCTGATATTGGTATCTCCATGGG-GATTTCTGGCTCT 1305
||||||||||||||||||||| ||| |||||||||||||| ||||| | |||| ||||||
Sbjct 1791 ATGATGCACCAGCTTTAGCTACAGCGGATATTGGTATCTCAATGGGTG-TTTCCGGCTCT 1849
Query 1306 GCTCTTGCAACACAGACTGGTCATATTATTCTGATGTCTAATGACATAAGAAGGATACCA 1365
|| ||||||||| |||||||| |||| ||||||||||| ||||| || ||||| |||||
Sbjct 1850 GCACTTGCAACAGAGACTGGTAATATAATTCTGATGTCCAATGATATCAGAAGAATACCG 1909
Query 1366 CAAGCGGTGAAGCTAGCGAGAAGAGCTCGGCGCAAAGTTATTGAAAACGTGTGTCTT-TC 1424
|| ||| | ||||| || | |||||| | ||||| | || || ||| ||| | ||
Sbjct 1910 CAGGCGATAAAGCTTGCAAAAAGAGCGAAAAGGAAAGTGGTGGAGAATGTG-GTCATATC 1968
Query 1425 CATCATTTTAAAAGCAGGAATACTGGCTTTGGCATTTGCTGGTCATCCTTTGATTTGGGC 1484
|||| | | |||| || || || || |||||||||||||||||||| ||||||||||
Sbjct 1969 AATCACTATGAAAGGAGCTATTCTTGCATTGGCATTTGCTGGTCATCCGCTGATTTGGGC 2028
Query 1485 AGCGGTTCTTGTTGACGTAGGAACTTGTTTGCTTGTGATTCTCAATAGTATGTTGCTGCT 1544
||| ||||||| || |||||||||||| |||||||||| || ||||| |||||| ||||
Sbjct 2029 AGCTGTTCTTGCAGATGTAGGAACTTGTCTGCTTGTGATCCTTAATAGCATGTTGTTGCT 2088
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154865353041
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5