BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473936 Length=387 Score E Sequences producing significant alignments: (Bits) Value AT1G48010.1 | Symbols: | Plant invertase/pectin methylesterase... 512 9e-145 > AT1G48010.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:17711491-17712660 REVERSE LENGTH=537 Length=537 Score = 512 bits (277), Expect = 9e-145 Identities = 355/392 (91%), Gaps = 7/392 (2%) Strand=Plus/Plus Query 1 GATCCTAAAATT-GAAAAGCTTGATCTTTCTGACACTGCCAAATATTTGATACATCATGC 59 |||||||||||| ||||| ||||||||| ||| | |||||||| |||||| ||| |||| Sbjct 148 GATCCTAAAATTGGAAAA-CTTGATCTTCCTGGCGTTGCCAAATGTTTGATTCATTATGC 206 Query 60 GCAACAAAATGCCTTAGACACACATAATCAGTTACAATTACTTGCTAATAGCACGACCGA 119 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 207 TCAACAAAATGCCTTAGATACACATAATCAGTTACAATTACTTGCTAATAGCACGACTGA 266 Query 120 TAAACGTACTAAAGAATGTTACATCTCATGCTCAAAGTACTACGACAAAGCTCTTTACTC 179 ||| ||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct 267 TAACCGTACCAAAGAATCTTACATCTCATGCTCAAAGTATTACGACAAGGCTCTTTACTC 326 Query 180 TTTTGGTGAGGCCCTAAAGGATATAGAGGTCCATAATCCTGATTATTTAAACGTTGAGAT 239 ||||| |||||||||||| ||| || ||||| ||||||||||||||||||| ||||||| Sbjct 327 TTTTGATGAGGCCCTAAAAGATTTAAAGGTCAATAATCCTGATTATTTAAATATTGAGAT 386 Query 240 CT-CAGCTGCTCGGCAAAATGCAAATGATTGCAAAACTTTAGATCTGAAAGATGT-T--A 295 | ||||||||||||||||||||||||||||||||||||| |||||||||||||| | | Sbjct 387 -TACAGCTGCTCGGCAAAATGCAAATGATTGCAAAACTTTGGATCTGAAAGATGTCTTCA 445 Query 296 AACCTGATCCAAAACTCATGATGAAGATAGATTTTCTTGAGAATGTATGTGGAATTGTCT 355 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct 446 AACCTGATCCAAAACTCATTATGAAGATAGATTTTCTTGAGAATGTATGTGGAATTCTTT 505 Query 356 TGTCAATTTCTGACATATTACCAAAGAATTAG 387 | || |||||||| |||||||||||| ||||| Sbjct 506 TATCCATTTCTGATATATTACCAAAGTATTAG 537 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18247192887 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5