BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473949
Length=2803
Score E
Sequences producing significant alignments: (Bits) Value
AT1G48110.1 | Symbols: ECT7 | evolutionarily conserved C-termin... 3046 0.0
AT3G17330.1 | Symbols: ECT6 | evolutionarily conserved C-termin... 769 0.0
> AT1G48110.1 | Symbols: ECT7 | evolutionarily conserved C-terminal
region 7 | chr1:17769938-17773493 REVERSE LENGTH=2582
Length=2582
Score = 3046 bits (1649), Expect = 0.0
Identities = 1898/2015 (94%), Gaps = 29/2015 (1%)
Strand=Plus/Plus
Query 542 AATTTCAGGTGTTTATTCAAACTCCATTGACACAAACATTTTCTTTGATAAGTTAAAAGC 601
|||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct 202 AATTTCTGGTGTTTATTCAAACTCCATTGTTACAAAGATTTTCTTTGATAAGTT-AAAGC 260
Query 602 AATGTATACCTCCGAGGGAGCCCCTGATTTTGTTGTTGACCAGGGCATGTATTACCCCGT 661
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 261 AATGTATACCTCCGAGGCAGCCCCTGATTTTGTTGTTGACCAGGGCATGTATTACCCCGT 320
Query 662 TGATGCCAGTTATGGCTATTACTGTACAGTTTATGAGTCACCCGGTGATTGGGAGAACCA 721
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 321 TGATGCCAGTTATGGCTATTACTGTACAGGTTATGAGTCACCCGGTGATTGGGAGAACCA 380
Query 722 TCAGATGTTTTTTGGTGTAGATGGTTCAGAAGTCCAGTATACGGGTGGGCAGAATGAAAA 781
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct 381 TCAGATGTTTTTTGGTGTAGATGGTTCAGAAGTCCAATACACAGGTGGGCAGAATGAAAA 440
Query 782 TTCTCCCTATATATGCTATACACCTAGTTATGGATATGCACAGTCTCCTTACAATCCATT 841
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 441 TTCTCCCTATATATGCTATACACCTAGTTATGGATATGCACAGTCTCCTTATAATCCATT 500
Query 842 CAATCCTTACATACCTGGCGCTGCAATAGGCGTTGATTCTCCTTTTGTTAG-TCCTCAAC 900
|||||||||||||||||||||| |||| |||||||||||| |||||||| | ||||||||
Sbjct 501 CAATCCTTACATACCTGGCGCTTCAATTGGCGTTGATTCTGCTTTTGTT-GCTCCTCAAC 559
Query 901 AGTTTTACTCTATTCCTCCTTTCCAGAGTGTTGCAACGTCACCTACGTTTGTTCCATATG 960
| ||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct 560 AATTTTACTCTATTCCTCCTTACCAGAGTGTTGCAACGTCGCCTACTTTTGTTCCATATG 619
Query 961 CAATTCAAACTGATATTACCTCGAATAGCTCAACAAACTCTTTGGTAGAGACTGTTTCAG 1020
|||||||| |||| ||| |||||||||||| |||||||||||||| ||||||| |||||
Sbjct 620 CAATTCAACCTGAGATTGTCTCGAATAGCTCTACAAACTCTTTGGTTGAGACTGGTTCAG 679
Query 1021 CTAATAGGGATCGATCCGATGGGAGAGGGTCCAGGCAGAGAAATGGCACCGCTACTGGTG 1080
||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||| |
Sbjct 680 CTAATAGGGGTCGATCTGATGGGAGAGGGTCAAGGCAGAGAAGTGGCACCGCTACTGCCG 739
Query 1081 GGCTTCAAAGGAATGCTCCAAAACTTTCTGCAGTGAACTCTTCGGGCAAGATCTCTGAGA 1140
| || |||||||||| ||| |||||| |||||| |||||||| |||||||||||| ||||
Sbjct 740 GACTCCAAAGGAATGATCCGAAACTTCCTGCAGGGAACTCTTTGGGCAAGATCTCGGAGA 799
Query 1141 AACCAAGGCCTAACTCTGGACAAAGCAGACAGCCAGAAATGGACAAGAGTGATTCTACTT 1200
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 800 AACCAAGGCCTAATTCTGGACAAAGCAGACAGTCAGAAATGGACAAGAGTGATTCTACTT 859
Query 1201 CGTCATCAGGACAAGCTCTCCAGGGAAGAGCTACCTCCGTCAGTAGTACTCAACCTGTTG 1260
| |||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||
Sbjct 860 CATCATCAGGACAAGCTCGCCAGGGAAGAGTTACCTCCGTCAGT-G--CTCAACCTGTTG 916
Query 1261 ACGTTGTTTCTAGTAGCAGAGTATCGTCTTTTGGGCAATTAGACATTGCTCCACCTGAAC 1320
|||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 917 ACGTGGTTTCCAGTAGCAGAGTATCGTCTTTTAGGCAATTAGACATTGCTCCACCTCAAC 976
Query 1321 TTAATGGTTTTTCAAAAATTGCAACAAACAATAACAATCTTCGGCCCAAGCTGTATGGTG 1380
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 977 TTAATGATTTTTCAAAAATTGCAACAAACAATAACAATATTCGGCCCAAGCTGTATGGTG 1036
Query 1381 GCCATGCAAATATAATTCCTGATACAGTCCGTGAACAAAATCGAGGTCGAAGATCGAGAG 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCCATGCAAATATAATTCCTGATACAGTCCGTGAACAAAATCGAGGTCGAAGATCGAGAG 1096
Query 1441 CATTGGGAAATCAACTTATTGTTAAGGCTTATACAACAAAAGCTGGAAATGCTGATGCCG 1500
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1097 CATTGGGAAATCAACTTATTGTTAAAGCTTATACAACAAAAGCTGGAAATGCTGATGCCG 1156
Query 1501 AAGGAAATATTGTGATCAATCCTTCTCAGTATAATAAAGAGGATCTCCGAATCGATTACA 1560
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 AGGGAAATATTGTGATCAATCCTTCTCAGTATAATAAAGAGGATCTCCGAATCGATTACA 1216
Query 1561 GCAATGCCAAGTTTTTTGTGATTAAATCGTATAGTGAAGATGATGTTCACAAGAGCATCA 1620
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1217 GCAATGCCAAGTTTTTTGTGATTAAATCGTATAGTGAAGATGACGTTCACAAGAGCATCA 1276
Query 1621 AATACAATGTTTGGTCATCAACTTTGCATGGGAACAAAAAATTGCAGAGTGCGTATGAAG 1680
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1277 AATACAATGTTTGGTCATCAACTTTGCATGGGAACAAGAAATTGCAGAGTGCGTATGAAG 1336
Query 1681 ATGCTCAGAGAATAGCCGCCGAGAAGTCTTGTGAATGCCCGATATTCTTGTTCTTTTCTG 1740
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 ATGCTCAGAGAATAGCCACCGAGAAGTCTTGTGAATGCCCGATATTCTTGTTCTTTTCTG 1396
Query 1741 TCAATGCCAGTGGTTTGTTCTGTGGCATGGCTGAGATGACTGGTCCAGTTTCTTTTGATA 1800
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 TTAATGCCAGTGGTTTGTTCTGTGGCATGGCTGAGATGACTGGTCCAGTTTCTTTTGATA 1456
Query 1801 AAGACATGGATTTTTGGCAGCAAGACAAATGGAGTGGAAGCTTTCCCGTCAAATGGCACA 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 AAGACATGGATTTTTGGCAGCAAGACAAATGGAGTGGAAGCTTTCCCGTCAAATGGCACA 1516
Query 1861 TCATAAAAGATGTTCCCAATAGCTATTTCAGGCACATCATACTACAGAATAATGAAAATA 1920
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1517 TCATAAAAGATGTTCCCAATAGCTATTTCAGGCACATCATACTACAGAACAATGAGAATA 1576
Query 1921 AGCCGGTCACCAACAGTCGAGACACACAAGAGATAATGCTGAAACAAGGTCTGGAAGTGC 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1577 AGCCGGTCACCAACAGTCGAGACACACAAGAGATAATGCTGAAACAAGGTCTGGAAGTGC 1636
Query 1981 TAAAAATATTTAAAGATCATATGGAAAGGACTTCATTACTAGATGATTTTGTCTATTACG 2040
||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||
Sbjct 1637 TAAAAATATTTAAAGATCATATGGAAAGGACTTCATTGCTAGATGATTTTGTGTACTACG 1696
Query 2041 AAAGCCGACAGAGAGTCATGCAGGATGAGAGAACCAGGCTGCCGTACAGGACCTTTCTTA 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 AAAGCCGACAGAGAGTCATGCAGGATGAGAGAACCAGGCTGCCGTACAGGACCTTTCTTA 1756
Query 2101 GCCCTTTACCATTACCCAGACCAGATCTCTCTGATAGAAACAATAAAATCCCCTTGGAAG 2160
| ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||
Sbjct 1757 ACGATTTACCATTACCCAGGCCAGATCTCTCTGATAGAAACAAGAAAACCCCCTTGGAAT 1816
Query 2161 CCTTCAAGAGACCTTCAGTGAGCTCTGCAAAAACCAAGGAGGTTCGTTCAAAGTCAGATG 2220
||||||||| ||||||||| | ||||||||||||| ||||| ||| |||||||||||| |
Sbjct 1817 CCTTCAAGAAACCTTCAGTAATCTCTGCAAAAACCGAGGAGCTTCCTTCAAAGTCAGAGG 1876
Query 2221 GGAATGAGGAGACCACTGTTAAGGAAG-TCAATGAAGAAAATACTTCTTCCATTCAGAAG 2279
||||||||||||||||||| || |||| | ||||||||| |||||||||||| |||||||
Sbjct 1877 GGAATGAGGAGACCACTGTAAAAGAAGGT-AATGAAGAAGATACTTCTTCCACTCAGAAG 1935
Query 2280 AAGATCAGCTCTCTCACCATTGACCCGAGTGGTACAGACTCTGACCCGACCACTGTTTCT 2339
||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1936 AAGATCAGCTCACTCACCATTGACCCGAGTGGTACAGACTCTAACCCGACTACTGTTTCT 1995
Query 2340 CACCTGAACCAGAAGAGTCAAGCCAAGTCTAAACCGACCTCCTCAGGCTCTCTCAAGAAG 2399
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 1996 CACCTGAACCAGAAGAGTCAAGCCAAGTCTAAACCGAACTCCTCTGGCTCTCTCAAGAAG 2055
Query 2400 ACAGACTCCTCGGAAGTGGTTGATGCTTCTCTCTCTGATGAAAATGACACTGTCAAAGTA 2459
|||||| |||| ||||||||||||||||||||||| ||| |||||||| | | |
Sbjct 2056 ACAGACCCCTCTGAAGTGGTTGATGCTTCTCTCTCGGATAAAAATGAC--T--C----T- 2106
Query 2460 GGATCATTGCCTATAAAAGTTACCGGGTCTCCTGCAATCTTAACAGTCGGTACTATTCCT 2519
| | | | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2107 ---T--T--C--A-AA--GTTACCGGGTCTCCTGCAATCTTAACAGTCGGTACTATTCCT 2154
Query 2520 CTGGACCCCAAGTCACTTCAGAAGTAAAACACCCC 2554
|||||||||||||||||||||||||||| ||||||
Sbjct 2155 CTGGACCCCAAGTCACTTCAGAAGTAAACCACCCC 2189
Score = 228 bits (123), Expect = 3e-58
Identities = 180/204 (88%), Gaps = 17/204 (8%)
Strand=Plus/Plus
Query 2554 CTCTCAAAAGTCTAAAGTTAATCCTGCGTCATCATACAAGCCAATGTGGTATGCAGAGAG 2613
||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||
Sbjct 2231 CTCTCTAAAGTCTAAAGTTGATCCTGCTTCATCATACAAGCCAATGTGGTATGAAGAGAG 2290
Query 2614 GGTTCTGTTTGTATAGATGAGTCTTGACTGGTGACCTGATAATCCGTGATTTGATCAAAC 2673
||||||||||||||||||||||||||||| ||| | | | ||||||||| ||||||||
Sbjct 2291 GGTTCTGTTTGTATAGATGAGTCTTGACT--TGA--T-A-A-TCCGTGATTCGATCAAAC 2343
Query 2674 GCCAAAAAGAGAATTGTTGCGG-TT----T--GCGGTTAGTGGTTGTGTTTCGGTTATTT 2726
||||||||||||||||||| || || | |||||||||||||| |||||||||||||
Sbjct 2344 GCCAAAAAGAGAATTGTTGAGGGTTGAGGTTTGCGGTTAGTGGTTGCGTTTCGGTTATTT 2403
Query 2727 TGGATGTGGCCT-GAGAGAGCTGT 2749
||||||| ||| |||||||||||
Sbjct 2404 TGGATGT--CCTTGAGAGAGCTGT 2425
Score = 165 bits (89), Expect = 2e-39
Identities = 152/179 (85%), Gaps = 18/179 (10%)
Strand=Plus/Plus
Query 1 ctctctctctctctcCAACCCCTCTTCTCAATCTAGGGTTAGGGTTTCGATTCTGC-AGA 59
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 33 CTCTCTCTCTCTCTTCAACCCCTCTTCTCAATCTAGGGTTAGGGTTTCGATTCTGCTAGA 92
Query 60 GG-----Gtt-t------tt-t--ttC--AGCCCTCTTTTCATAAGCCTTGTTCTCTCTT 102
|| || | || | ||| |||||||| |||||||||||||| |||||
Sbjct 93 GGTTTTTTTTCTCCCAACTTATACTTCTAAGCCCTCTCGTCATAAGCCTTGTTGACTCTT 152
Query 103 CTTCTTAATTCGAAGAACTTCATAGTCTAAGCATGTCGTGATTATCCCAAATTTCTGGT 161
|||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 153 CTTCTTAATTTGAAGAACTTCGTAGGCTAAGCATGTCGTGATTATCCCAAATTTCTGGT 211
Score = 80.5 bits (43), Expect = 8e-14
Identities = 54/59 (92%), Gaps = 2/59 (3%)
Strand=Plus/Plus
Query 2746 CTGT-TGTGtttttttttGTTTGTTTGTTCCTCCCAACTCAAAGAGTTTCAAATTGAAT 2803
|||| |||| || | |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2515 CTGTCTGTG-TTCTGTTTGGTTGTTTGTTCCTCCCAACTCAAAGAGTTTCAAATTGAAT 2572
> AT3G17330.1 | Symbols: ECT6 | evolutionarily conserved C-terminal
region 6 | chr3:5916940-5920188 REVERSE LENGTH=2405
Length=2405
Score = 769 bits (416), Expect = 0.0
Identities = 694/828 (84%), Gaps = 19/828 (2%)
Strand=Plus/Plus
Query 1411 GTGAACAAAATCGAGG-TCGAAGATCGAG-AGCATTGGGAAATCAACTTATTGTTAAGGC 1468
|||||||||||||||| ||| ||| |||| || || |||||||||| ||||| || ||
Sbjct 957 GTGAACAAAATCGAGGATCG-AGAACGAGAAG-ATCAAGAAATCAACTAATTGTCAAAGC 1014
Query 1469 TTATACAACAAAAGCTGGAAATGCTGATGCCGAAGGAAATATTGTGATCAATCCTTCTCA 1528
|||||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct 1015 ATATACAACCAAAGCTGGAAATGCTGATGCGGAAGGAAATATTGTGATAAATCCTGATC- 1073
Query 1529 G-TATAATAAAGAGGATCTCCGAATCGATTACAGCAATGCCAAGTTTTTTGTGATTAAAT 1587
| ||||||||||| ||| || | || || |||||| |||||| ||||||||||||||| |
Sbjct 1074 GATATAATAAAGAAGATTTCAGTATTGAATACAGCGATGCCAGGTTTTTTGTGATTAAGT 1133
Query 1588 CGTATAGTGAAGATGATGTTCACAAGAGCATCAAATACAATGTTTGGTCATCAACTTTGC 1647
||||||||||||||||||||||||||||||||||||| ||| |||||||| || |||
Sbjct 1134 CGTATAGTGAAGATGATGTTCACAAGAGCATCAAATATGGTGTCTGGTCATCTACATTGA 1193
Query 1648 ATGGGAACAAAAAATTGCAGAGTGCGTATGAAGATGCTCAGAGAATAGCCGCCGAGAAGT 1707
|||||||||| ||||||||||||| |||||||||||||||||||||||| | |||||||
Sbjct 1194 ATGGGAACAAGAAATTGCAGAGTGTATATGAAGATGCTCAGAGAATAGCCACTGAGAAGT 1253
Query 1708 CTTGTGAATGCCCGATATTCTTGTTCTTTTCTGTCAATGCCAGTGGTTTGTTCTGTGGCA 1767
|| ||||||| || || ||||| ||||||||||||||| |||||||| |||||||||||
Sbjct 1254 CTCGTGAATGTCCTATTTTCTTATTCTTTTCTGTCAATTCCAGTGGTCTGTTCTGTGGCG 1313
Query 1768 TGGCTGAGATGACTGGTCCAGTTTCTTTTGATAAAGACATGGATTTTTGGCAGCAAGACA 1827
||||||||||||| ||||||||||| || || ||||||||||||||||||||||||||
Sbjct 1314 TGGCTGAGATGACCGGTCCAGTTTCCTTCGACCGAGACATGGATTTTTGGCAGCAAGACA 1373
Query 1828 AATGGAGTGGAAGCTTTCCCGTCAAATGGCACATCATAAAAGATGTTCCCAATAGCTATT 1887
||||||||||||||||||| ||||| |||||||| || ||||||||||| ||||||||||
Sbjct 1374 AATGGAGTGGAAGCTTTCCTGTCAAGTGGCACATTATTAAAGATGTTCCTAATAGCTATT 1433
Query 1888 TCAGGCACATCATACTACAGAATAATGAAAATAAGCCGGTCACCAACAGTCGAGACACAC 1947
|||||||||| || |||| ||||| || |||||||| || |||||||| ||||||||||
Sbjct 1434 TCAGGCACATTATTTTACATAATAACGAGAATAAGCCAGTGACCAACAGCCGAGACACAC 1493
Query 1948 AAGAGATAATGCTGAAACAAGGTCTGGAAGTGCTAAAAATATTTAAAGATCATATGGAAA 2007
|||||||||| ||||||||||| || || ||||||||| |||| ||| ||||| |||||
Sbjct 1494 AAGAGATAATACTGAAACAAGGACTCGAGGTGCTAAAACTATTCAAACATCATGCGGAAA 1553
Query 2008 GGACTTCATTACTAGATGATTTTGTCTATTACGAA-AGCCGACAGAGAGTCATGCAGGAT 2066
||||||| || ||||||||||| | || |||||| | ||| |||||| ||||||||||
Sbjct 1554 AGACTTCACTATTAGATGATTTTATGTACTACGAAGA-CCGCCAGAGACTCATGCAGGAA 1612
Query 2067 GAGAGAACCAGGCTGCCGTACAGGACCTTTCTTAGCCC-TTTACCATTACCCAGACC-AG 2124
|||||| | || || || | |||||||||| || || ||| || | | || | | ||
Sbjct 1613 GAGAGAGCTAGACTTCCATTTAGGACCTTTCGCAGGCCATTTCCCGTG-CTCA-ATCTAG 1670
Query 2125 ATCTCTCTGATAGAAACAATAAAATCCCCTTGGAAGCC-TTCAAGA-GACCTTCAGTGAG 2182
|| | ||||| |||| ||| |||| | || ||| | | || |||| | ||||||||||
Sbjct 1671 ATTTTTCTGACAGAAGCAAGAAAAGCTCCAAGGATGTCGTT-AAGAAG-CCTTCAGTGAC 1728
Query 2183 CTCTGCAAAAACCAAGGAGGTTC-GTTCAAAG--TCAGATGGGAATGA 2227
||||||| |||| |||| || | ||| ||| ||||||||| ||||
Sbjct 1729 CTCTGCAGAAACAAAGGTTGTGCAGTTAAAAAACTCAGATGGGGATGA 1776
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139263433768
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5