BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473972 Length=2754 Score E Sequences producing significant alignments: (Bits) Value AT1G48360.2 | Symbols: | zinc ion binding;nucleic acid binding... 3655 0.0 > AT1G48360.2 | Symbols: | zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides | chr1:17868650-17873031 FORWARD LENGTH=2772 Length=2772 Score = 3655 bits (1979), Expect = 0.0 Identities = 2304/2455 (94%), Gaps = 46/2455 (2%) Strand=Plus/Plus Query 314 TTCTGAAACTTCTCAATTCAATTTGGTGCAAAGAAGTGA--C-------TCCATTTGCTG 364 ||||||||||| | |||||| |||||||||||||||||| | || |||||||| Sbjct 350 TTCTGAAACTTTTGAATTCAGTTTGGTGCAAAGAAGTGAGCCTAGTGAGTCTATTTGCTG 409 Query 365 CAAGGCTGAAGATGGTTCATGTTCTCCAAGTAGTGAGGAG-GTTTTGAAAACTGTGACTT 423 ||||| ||||||||||||||||||||||||||| |||||| | ||||||||||||||||| Sbjct 410 CAAGGTTGAAGATGGTTCATGTTCTCCAAGTAGGGAGGAGAG-TTTGAAAACTGTGACTT 468 Query 424 TAGATGAAGCCAATGGTGAGGCTATTGAAACCTTTATAGTTGGTAGGAAGTTCAGTGATG 483 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 469 TAGATGAAGACAATGGTGAGGCTATTGAAACCTTTATAGTTGGTAGGAAGTTCAGTGATG 528 Query 484 TTCAGGATTTAGAAATTGGGGGTAACATTTTCCTTTTGAGACATCCTGAGAATGTCAAGG 543 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| | Sbjct 529 TTCAGGATTTAGAAATTGGGGGTGACATTTTTCTTTTGAGACATCCTGAGAATGTCAAAG 588 Query 544 ATCGCAACGCTATAAAGGTTGTTTCTGCAGACTCTGAAATGCTTGGGTATCTACCTAAAG 603 |||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 589 ATCGAAACGCTATAAAGGTTATTTCTGGAGACTCTGAAATGCTTGGGTATCTACCTAAAG 648 Query 604 ATATTTCCCAGTGCTTGTCCCCGCTGATCGATGACTATGGCCTTAAGTTTGAGGGAACAA 663 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 649 ATATATCCCAGTGCTTGTCCCCGCTGATCGATGACTATGACCTTAAGTTTGAGGGAACGA 708 Query 664 TAACATCTGTTCCGAAGAACTCTTCTGAAGCTGTTCCGATCAAAGTTGTTTGTCACAAGA 723 ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| Sbjct 709 TAACATCTGTTCCGAAGAAATCTTCTGAAGCTGTTCTGATCAAGGTTGTTTGTCACAAGA 768 Query 724 TGACATCTGATGGTTGGAAGGAATGTGAATTTTATGGAGATTTTAAACCTCTTTGGGAGA 783 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 769 TGAGATCTGATGGTTGGAAGGAATGTGAATTGTATGGAGATTTTAAACCTCTTTGGGAGA 828 Query 784 AAGTTCTTCAGGTTGTTGAGCATCAGATGCAATTTCCGCCTAAAACAACAAGATACCAGT 843 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 829 AAGTTCTTCAGGTTGTTGAGCATCAGATGCAATTTCCGCCTAAAACAACAAGATATCAGT 888 Query 844 TGAATTTCAACGTATTACTACAAGAGGTTCTAAGAAGCTGCTCTCACCTATTTACAGCCG 903 |||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| Sbjct 889 TGAACTTCAACGTATTACTACAAGAAGTTCTAAGAAGCTGCTCTCACTTATTCACAGCCG 948 Query 904 AGGAAAGGGCATTCTTGGAATCTTTCCCCACTCTTTCAGAGGATAGCCAGAGACTTTTCA 963 | |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 949 ATGAAAAGGCATTCTTGGAATCTTTCCCCACACTTTCAGAGGATAGCCAGAGACTTTTCA 1008 Query 964 TCCGGCTTTACACACGAAAAGGACCTTGGTTTAGGCTATCAAATATTTCATACCCTGAGG 1023 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1009 TCCGGCTTTACACACGAAAAGGACCTTGGTTTAGGCTATCAAATATATCATACCCTGAGG 1068 Query 1024 TGTCTGATTCTCTTCAAGCCCTGAAGGATCTAACAGTCAGGGGATTTATGAGTTCAGTGA 1083 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1069 TGACTGATTCTCTTCAAGCCCTGAAGGATCTGACAGTCAGGGGATTTATGAGTTCAGTGA 1128 Query 1084 AGGACGCAAGTGAACTAGATCACCAAAAGATGAAGGAGATCACAGAGTTGCTTAACGTCA 1143 ||||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||||| Sbjct 1129 AGGACGCAAATGAACTCGATAACCAAAAGATGAAGGAAATCACAGAGTTGCTTAACGTCA 1188 Query 1144 CTGAACTCCGTGATATCTTATCTATTAACAAGGTGTTCAGTTTCGGCTCAAGAAAGAGAG 1203 ||||||| ||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct 1189 CTGAACTTCGTGATATCTTATCTATGAACAAGGTGTTCAGTCGCACCTCAAGAAAGAGAG 1248 Query 1204 ACCTTATTAATTCACTTTGTTCTTGTTACAACGATGGAACGAGAATAAATCTAGCAACAA 1263 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1249 ACCTTATTAATTCTCTTTGTTCTTGTTACAATGATGGAACGAGAATAAATCTAGCAACAG 1308 Query 1264 TAATTCTAGAAAGAACAGGACTATGTGCTAAGATATCCAGTACTGCAGAATCTCTCATAT 1323 |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| Sbjct 1309 TAATTCTAGAAAGAACAGGACTATGTGCTAAGGTATCAAGTACAGCAGAATCTCTCATAT 1368 Query 1324 GGCGCGTTGAGAGGCTTTTCTTTCTCAATGGGGAGCAAGATCTATCGTCTTTTGTTCTGC 1383 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1369 GGCGCGTTGAGAGGCTTTTCTTCCTCAATGGGGAGCAAGATCTATCGTCTTTTGTTCTGC 1428 Query 1384 AGGATCTTGGTATTATCAAATACCCAACTTACAAATGCATTGACTCAGAGCAAATATTTT 1443 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1429 TGGATCTTGGTATTATCAAATACCCAACTTACAAATGCATTGACTCAGAGCAAATATTCT 1488 Query 1444 CGAATCGGACTAAGCTTTTAGCATATGAAGAGGCCATTGAAGTGGCTCAGTTGATGGATG 1503 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1489 CGAATCGGACCAAGCTTTTAGCATATGAAGAGGCCATTGAAGTGGCTCAGTTGATGGATG 1548 Query 1504 AGTCTCTTGACAATGAGGATTCTCGGACAGTGTTGAAATGTATCATGATTGCTGAAACCC 1563 |||||||||||||||||||| ||| ||||||||||||||| || || ||||||||||||| Sbjct 1549 AGTCTCTTGACAATGAGGATCCTCAGACAGTGTTGAAATGCATTATAATTGCTGAAACCC 1608 Query 1564 GCATATCCAGTTCTTCTTTGGATTCTGCTCACGCTGCTGGATTTAATCGCTTTACAGCTT 1623 ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1609 GCATATCCAGTTCCTCTTTGGATTCTGCTCACGCTGCTGCATTTAATCGCTTTACAGCTC 1668 Query 1624 CATGGGTTTACTCAAAGGTGGTTCTCTTAGGAGTTTCCTTTTTTGAGAACCACAAAAGGC 1683 |||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 1669 CATGGGTTAACTCAAAGGTGGTTCTCTTAGGAGTTTCCTTTTTTGAGAACCAGAAGAGGT 1728 Query 1684 ATATTATCTTTGTCTTTTTGCCTGTTGTGATTTTTTATCTACTGAGGCGATTGCTCAGCT 1743 | | | | | || ||| | || |||||||||||||||||||||| Sbjct 1729 ACA--ACC---GA------GCA-GTT-T-AT-------CTACTGAGGCGATTGCTCAGCT 1767 Query 1744 GTTTTAATTGTGATGGGAGACGAGGATACTGGACAGTCAGGTTATCAACGGATTTGGAGC 1803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1768 GTTTTAATTGTGATGGGAGACGAGGATACTGGACAGTCAGGTTATCAACGGATTTGGAGC 1827 Query 1804 ACATGGGACGTCCAAATGAGAGCCTTACAGTAGCAGAGCAGGGACTATTGGATCCTTGGG 1863 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 1828 ACATGGGACGTCCAAATGAGAGTCTTACAGTTGCAGAGCAGGGACTATTGGATCCTTGGG 1887 Query 1864 TGCGTGCTGGTTCAAGGGTAGCTTTGCAAAGGCGCATTCTTCGTTTGGCAAAACCTCCAA 1923 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1888 TGCGTGCTGGTTCAAGGGTAGCTTTGCAAAGGCGGATTCTTCGTTTGGCAAAACCTCCAA 1947 Query 1924 GACGCTGGAAAACTCCCACTTTTTCAAATCTCGTCGAAAACAAGATCCCCGAGGTTACTA 1983 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1948 GACGCTGGAAAACTCCCACTTTTTCAAATCTCGTCGACAACAAGATCCCCGAGGTTACTA 2007 Query 1984 TTCAAGGGAGATCACTGAATTGTGAAGTTGGCATGAAAAACAGGTTTTATGGAGAAGACG 2043 ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| | Sbjct 2008 TTCAAGGGAGATCACTGAACTGTGAAGTTGGCATAAAAAATAGGTTTTATGGAGAAGATG 2067 Query 2044 GAGAACAATGTGGAGTCGAGCAGCTTGCATTGCAGTATTACAGTGGAGAAGGAGGA---T 2100 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | Sbjct 2068 GAGAACAATGTGGAGTGGAGCAGCTCGCATTGCAGTATTACAGTGGAGAAGGAGGAGGAT 2127 Query 2101 GGCAAGGAATTCATACAGAGAGTAGCATCTGGTTAACGATTTTCGGGCTTCTCATGTGGG 2160 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2128 GGCAAGGAATTCATACAGAGAGTAGTATCTGGTTAACGATTTTCGGGCTTCTCATGTGGG 2187 Query 2161 ACATTCTATTTTCCGATGTACCGGGTGTTTTCCAAACCCGATTCCAGACTGCTCCATTGG 2220 | ||||||||||||||||| || || |||||||||||||||||||||||||||||| ||| Sbjct 2188 ATATTCTATTTTCCGATGTCCCTGGCGTTTTCCAAACCCGATTCCAGACTGCTCCACTGG 2247 Query 2221 ACTTAGAGACTGAATCCTTCTATCTAACCAGGAAAGAAACAATAGAGTCTCAGCTCGAAA 2280 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 2248 ACTTAGAGACTGAATCCTTCTATCTAACCAGGAAGGAAACAATAGAATCTCAGCTCGAAA 2307 Query 2281 AAGTTGCGAACGGAATGGCTGAAGAAATACTAATCATATCATATGAAACACACCGTGGAA 2340 |||| || || ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2308 AAGTCGCAAATGGAATGGCTGAAGAAATACTAATCATATCATATGAAACACAACGTGGAA 2367 Query 2341 CAGCATGCAGAGGAGTGGCTTGGGATCGATTTTTGTTAGAGGAATTGAGAGCAGCAGTGG 2400 |||| |||||||||||||||||||| || |||| |||||||||| ||||||||||||||| Sbjct 2368 CAGCGTGCAGAGGAGTGGCTTGGGAGCGGTTTTCGTTAGAGGAACTGAGAGCAGCAGTGG 2427 Query 2401 CTTGTGTTGGAGGTGTGTGTATAGCATCGCTGTGCCGGCATTTAGCTCAAGACTATAGGA 2460 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2428 CTTGTGTTGGAGGTATGTGTATAGCATCGCTGTGCCGGCATTTAGCTCAAGACTATAGGA 2487 Query 2461 GCTGGTGCAGTGGAATGCCTGATCTACTGCTATGGCGGTTCAAGGAGAATGGTTATGAAG 2520 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2488 GCTGGTGCAGTGGAATGCCTGATCTACTGGTATGGCGGTTCAAGGAGAATGGTTATGAAG 2547 Query 2521 GTGAAGCTAAGCTTGTGGAAGTTAAATCAGAGAGAGATAGGTTATCAGAACAACAAAGAG 2580 |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| Sbjct 2548 GTGAAGCTAAGCTTGTGGAAGTGAAATCAGAGAAAGATAGGTTATCAGAACAGCAAAGAG 2607 Query 2581 CTTGGCTTCTACTTCTAATGGATTCAGGCTTTAATGTTGAGATTTGCAAAGTGAGACCTG 2640 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2608 CTTGGCTTCTACTTCTAATGGATTCAGGCTTTAATGTTGAGATTTGCAAAGTAAGACCTG 2667 Query 2641 CTTCTTTAACTAAAACTTAATTATACAAATTAAAAGGATTTGTACAATAACACACGATTT 2700 ||||||||| |||||||||||||| ||||||||||||| | | | |||||||||| Sbjct 2668 CTTCTTTAATTAAAACTTAATTATCCAAATTAAAAGGA---G-A-A----CACACGATTT 2718 Query 2701 GTTGGATAGTTACTGtttttt-tttttttCTTTATGCAAAAGGGATTTGTTTTTT 2754 || ||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct 2719 GTCGGATAGTTACT-TTTTTTCTTTTTTTCTTTATGCAAAAGTGATTTGTTTTTT 2772 Score = 448 bits (242), Expect = 2e-124 Identities = 292/316 (92%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 1 ATCGGCAGGAAATGCTCACCGGACGGGAGAGCTTGCTCCGGTTGATTGGAAAACGCCGGC 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1 ATCGGCAGGAAATGCTCACCGGACGGGAGAGTTTGCTCCGGTTGATTGGAAAGCGCCGGC 60 Query 61 GATATCTCCCCAATCGCCACCTTCTTCTCTCCGCTCCTACTCCGAATTCGTTGAATCTCG 120 ||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 61 GATTTCTCCCCAATCGCCACCTTCTTCTCTCCGCTCATACTCCGAATTCGTTAAATCTCG 120 Query 121 AGGTCAACGACGATGGCAATCTTATCTCATTAGCCGGAGATGATGGT-ATTCTGTCGGAT 179 || |||||||| ||||||||||| |||||||||||||||||||| || || | || || Sbjct 121 AGTTCAACGACTATGGCAATCTTGTCTCATTAGCCGGAGATGATTGTCGTT-TATCAGAG 179 Query 180 AATCCGGCTCCTCTC-GATGACCCGAGCAAATTCTCTGATGATTTGAGTCTATCCACGAG 238 ||||| || || || ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 180 GATCCGACTTCT-TCAGATGACCCGAGTAAATTCTCTGATGATTTGAGTTTATCCACGAG 238 Query 239 GAAGAAACGGAGATTAACTCAGACCACTCTTCTTCAGTCAAATTTCTGGTCAGTGCCAAA 298 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 239 GAAGAAACGGAGATTAACTCAGACCACTCTTCTTCAGTCAAGTTTCTTGTCAGTGCCAAA 298 Query 299 ACAATTAGAAGATGGT 314 |||||||||||||||| Sbjct 299 ACAATTAGAAGATGGT 314 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 136805253561 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5