BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474010 Length=718 Score E Sequences producing significant alignments: (Bits) Value AT1G48745.1 | Symbols: | unknown protein; Has 7 Blast hits to ... 955 0.0 > AT1G48745.1 | Symbols: | unknown protein; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:18030704-18031439 FORWARD LENGTH=736 Length=736 Score = 955 bits (517), Expect = 0.0 Identities = 672/741 (91%), Gaps = 34/741 (5%) Strand=Plus/Plus Query 1 ACGTAAAACCATCTACATTTTTATATAGTTTGaa-aaaagtattaaaattgtagataaat 59 ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||| Sbjct 1 ACGTAAAACCATCTACAATTTTATATACTTTGAATTTTTTTATTAAAATTGTAGATAAAT 60 Query 60 ataaaaatataaattcgtcttctttaaaaatCATTCATCTTTAATCTTTTTT-CTTCAAG 118 ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||| Sbjct 61 ATAAAAATATAAA-TCGTATTCTTTAAAATTCATTCATCTTTAATCTTTTTTGCTTCAAG 119 Query 119 AACACGATGAGCGATAACAAAACTCTTCTCCTGAGACAAATGGAACAAGAAGAAGATCGA 178 |||||||||||||| || |||| |||||||||||||| ||||| ||||| |||||||| Sbjct 120 AACACGATGAGCGACAATAAAAATCTTCTCCTGAGACGAATGG---AAGAAAAAGATCGA 176 Query 179 GCAAGAAAACAAATCTCTGTTTTGTCCTCCAAAAGATCCCAAACTGCAAACGCAAACGCA 238 ||||||||||||||||||||||| |||||||||||||||||||| | | |||||||| Sbjct 177 GCAAGAAAACAAATCTCTGTTTTATCCTCCAAAAGATCCCAAAC--C--A--CAAACGCA 230 Query 239 AACGCAGCTGTAACAGCTCCGTCCGAGGTGGCGTTTAACGTTTGTTGTTTATGTGTTTAT 298 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 231 AACGCAGCTGTTACAGCTCCGTCCGAGGTGGCGTTTAACGTTTGTTGTTTATGTGTTTAT 290 Query 299 TGTCCTCTTTGCGTTCTTTGGTGCTGCATCAAACAGCCTTGTACAATTGGATGGAGAGCC 358 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 291 TGTCCTCTTTGTGTTCTTTGGTGCTGCATCAAACAGCCTTGTACAATTGGATGGAGAGCC 350 Query 359 ATTCTAAACGCTAAACGCAGATTAAGCGGTTGCAGCGGCTGCGGTAGAAGCTTTAGCAGG 418 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 351 ATTCTAAACGCCAAACGCAGATTAAGCGGTTGCAGCGGCTGCGGTAGAAGCTTTAGCAGG 410 Query 419 AGGGTTTTGGCAGCAGATTATTCGTCGTTTTCGGATATTGATTCCGATGATGTGAATTGC 478 ||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 411 AGGGTTTTGGCTGCTGATTATTCGTCTTTTTCGGATATTGATTCTGATGATGTGAATTGC 470 Query 479 AAAGCTCATAATTGCTCAAAACGAAACCGGTGATTATAAAAT-TTCTATTGAGTTTTATA 537 ||||||||||||||||||| |||||| |||||| || |||| || |||||||||| || Sbjct 471 AAAGCTCATAATTGCTCAACACGAAATCGGTGACTACAAAAAATT-TATTGAGTTTCATG 529 Query 538 AATTTCCCAAACTT--T----CT---A---AA-CGCTGACGCAAAACGCTGGAGTTGACT 584 |||||||||||||| | || | || ||| ||||||||||||||||||||||| Sbjct 530 AATTTCCCAAACTTCCTTTTTCTCTGATCTAAACGCCGACGCAAAACGCTGGAGTTGACT 589 Query 585 TCATA----AT---GCTGAGTTAATGAAAAATATCGAGATTAAGCTCTATTATTTCGATA 637 ||||| || |||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 590 TCATAGTTCATAATGCTGAGTTGATGAAAAATCTCGAGATTAAGCTCTATTATTTCGATA 649 Query 638 ATTTAGAGAATAAAGATGTTGTTGTGATTGATTATATAAAGATGTATATATTACTTGGTG 697 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 650 ATTTAGAGGTTAAAGATGTTGTTGTGATTGATTATATAAAGATGTATATATTACTTGGTG 709 Query 698 AGGAATAAAGTTGtttttttt 718 | ||||||||||||||||||| Sbjct 710 AAGAATAAAGTTGTTTTTTTT 730 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34812263871 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5