BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474084
Length=1655
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64670.1 | Symbols: BDG1 | alpha/beta-Hydrolases superfamily... 2675 0.0
AT5G41900.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 172 8e-42
> AT1G64670.1 | Symbols: BDG1 | alpha/beta-Hydrolases superfamily
protein | chr1:24030820-24033556 REVERSE LENGTH=1662
Length=1662
Score = 2675 bits (1448), Expect = 0.0
Identities = 1589/1656 (96%), Gaps = 13/1656 (1%)
Strand=Plus/Plus
Query 1 CACCACcatacatacatacaacttacatacatacatGCCTACCACAAGACTCAAACTCCA 60
||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct 19 CACCACCATACATACATACAACTTACATACATACACGTCTTCCACAAGACTCAAACTCCA 78
Query 61 CAGCATGGGATTCTCACGGTGGCTCAACCGCACCGTGGGCTTCTTCGTCTTCTTCATCCT 120
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 79 CAGCATGGGATTCTCACGGTCGCTCAACCGCACCGTGGGCGTCTTCGTCTTCTTCATCCT 138
Query 121 CGACATTGTGGATTTCTTGCTTTGCTTTACCTACAAGACTCTTGATTTCTTCTTCGAGTC 180
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 CGACATTGTTGATTTCCTGCTTTGCTTTACCTACAAGACTCTTGATTTCTTCTTCGAGTC 198
Query 181 AGAGTGGAAACCCTGCTACTGCTGTCCGCCGCCTGAGGCCAAACCAATCGCGGCTGGAGG 240
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 199 CGAGTGGAAACCCTGCTACTGCTGTCCGCCGCCCGAGGCCAAACCAATCTCGGCTGGAGG 258
Query 241 GAGCAGAGTCGGTAAGATGATAGTGTCGGAAAGATCAGGAGAGTACTCGAAGGTAGTCTC 300
|| ||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 259 GAACAGAGGCGGTAAGATGATAGTGTCGGAAAGATCAGGAGACTACTCGAAGGTGGTCTC 318
Query 301 ACTCACAAGGACAAAGATCCATCTGGATGAGATCTCTGACACACTCTACTCACGCCCTTC 360
||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||
Sbjct 319 ACTCACAAGGACAAAGATCTATCTGGATGAGATCTCCGACACACTCTACTCTCGCCCTTC 378
Query 361 ACTCCTCACCAGGCTCACTAAGCTGGTGAAGTGCTTCAAGAAAGATGTTGTGAAATGTTG 420
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 379 ACTCCTCACCAAGCTCACTAAGCTGGTGAAGTGCTTCAAGAAAGATGTTGTTAAATGCTG 438
Query 421 TGATGAGTCCAAGAAGAGATCACCGTCAACTAAAAAGACATTACTCACTGTGAACTCCAC 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 439 TGATGAGTCCAAGAAGAGATCACCGTCAACTAAAAAGACATTACTCACTGTCAACTCCAC 498
Query 481 GGTGGTCGAGAAGTTGCGAAGAACACCAAGATGGTCTGATTGCCATTGCACTTTCTGCAC 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 GGTGGTCGAGAAGTTGCAAAGAACACCAAGATGGTCTGATTGCCATTGCACTTTCTGCAC 558
Query 541 TTCTTGGCTTTCCTCTTCCAACCATTCTCTCTTTGTCAATGTCCAACAGCCCAAAGACAA 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 559 TTCTTGGCTTTCCTCTTCCAACCAATCTCTCTTTGTCAATGTCCAACAGCCCACAGACAA 618
Query 601 CAAGGCACAAGAGAACGTAGTGTTCATTCATGGGTTCTTATCATCATCCACGTTTTGGAC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 CAAGGCACAAGAGAACGTAGTGTTCATTCATGGGTTCTTATCATCATCCACGTTTTGGAC 678
Query 661 GGAGACTCTGTTCCCAAACTTCTCAGACTCAGCCAAATCGAATTACAGGTTTCTCGCAGT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 GGAGACTCTGTTCCCAAACTTCTCAGACTCAGCCAAATCGAATTACAGGTTTCTCGCAGT 738
Query 721 GGACCTGTTGGGTTATGGGAAAAGTCCAAAGCCGAACGATTCATTGTATACATTAAAAGA 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 GGACCTGTTGGGTTATGGGAAAAGTCCAAAGCCGAACGATTCATTGTATACATTAAAAGA 798
Query 781 GCATTTAGAGATGATAGAGAGATCGGTGATTTCTCAGTTCAGACTCAAGACATTCCATTT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 799 GCATTTAGAGATGATAGAGAGATCGGTGATTTCTCAGTTCAGACTCAAGACATTCCATTT 858
Query 841 AGTGGCTCACTCCCTTGGCTGCATCTTGGCTCTTGCGCTCGCGGTTAAACACCCAGGAGC 900
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 859 AGTGGCTCACTCCCTAGGCTGCATTTTGGCTCTTGCGCTCGCGGTTAAACACCCAGGAGC 918
Query 901 CATCAAGTCGCTCACTCTATTGGCTCCTCCCTATTATTCGGTGCCAAAAGGAGTGCAAGG 960
||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 919 CATCAAGTCACTCACTCTATTGGCTCCTCCATATTATTCGGTGCCAAAAGGTGTGCAAGG 978
Query 961 GACGCAATATGTGATGAGAAAAGTGGCCCCCAAGGAAGTGTGGCCTCCGATGGCCTTTGG 1020
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||
Sbjct 979 GACGCAATATGTGATGAGAAGACTGGCCCCCAAGGAAGTGTGGCCTCCGATGGCCTTCGG 1038
Query 1021 AGCCTCGGTGGCTAGCTGGTACGAGCACATTAGCCGCACCGTTAGTCTAGTGCTTTGCAA 1080
|||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1039 AGCCTCAGTGGCTAGCTGGTACGAGCACATTAGCCGCACAGTCAGTCTAGTGCTTTGCAA 1098
Query 1081 GAACCATCACTTGTTGGAATTTCTCACCAGGCTACTCACCAGAAACAGGATGCGAACGTA 1140
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 GAATCATCACTTGTTGGAATTTCTCACCAGGCTACTCACCAGAAACAGGATGCGAACGTA 1158
Query 1141 CTTGATAGAAGGGTTCTTGTGTCACACACACAACGCGTCGTGGCACACACTACACAACAT 1200
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1159 CTTGATAGAAGGGTTCTTGTGTCACACACATAACGCGTCATGGCACACACTACACAACAT 1218
Query 1201 CATCTTCGGGTCGGGGAGCAAAGTAGAGGCTTACCTAGACCATGTCCGTGACAACGTGGA 1260
||| ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1219 CATTTTCGGATCGGGGAGCAAAGTAGAGGCTTATTTGGACCATGTCCGTGACAACGTGGA 1278
Query 1261 CTGTGAGGTCACAGTCTTCCACGGCGGTAGGGACGAGCTGATACCCGTCGAGTGCAGCTA 1320
|||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1279 CTGTGAGGTCGCAGTCTTCCACGGCGGTAGGGACGAGCTGATCCCCGTGGAGTGCAGCTA 1338
Query 1321 CGGCGTCAAGAGGAAAGTGCCACGTGCCAGGATCCACGTCGTTCCCGACAAAGACCACAT 1380
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1339 CGGCGTCAAGAGGAAAGTGCCACGTGCAAGGATCCACGTCGTCCCCGACAAAGACCACAT 1398
Query 1381 CACCATTGTTGTTGGGAGGCAGAAGGAGTTCGCTCGTGAGCTTGAGCTCATTTGGCACAG 1440
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1399 CACCATTGTTGTTGGGAGGCAGAAGGAGTTCGCTCGTGAGCTTGAGCTCATTTGGCGCAG 1458
Query 1441 ATCCACTACTCCTCAACTTCATTCAATAAATTAACCCTTCTTTATTTTAAGCTAAGtata 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1459 ATCCACTACTCCTCAACTTCATTCAATAAATTAACCCTTCTTTATTTTAAGCTAAGTATA 1518
Query 1501 tatatatatatatTAATACCAACCACTATTATTCAAATCATCATTT-ATACCCATTCACT 1559
||||||| || || | ||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1519 TATATAT-TA-AT-A---CCAACCACTATTATTCAAACCATCATTTTATACCCATTCACT 1572
Query 1560 TTTGCTTATTTCGGTGACTCCTATGTAGAAAGaaaaaaaaaaaaaaCAGAACATGTTTCT 1619
||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1573 TTTGCATATTTCGGTGACTCCTATGTAGAAA-AAAAAAAAA-----CAGAACATGTTTCT 1626
Query 1620 TTTGTGGTCGGCATTTCATTATGATTTTGAATTTTG 1655
|||||||| | |||||||||||||||| ||||||||
Sbjct 1627 TTTGTGGTTGCCATTTCATTATGATTTCGAATTTTG 1662
> AT5G41900.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:16768953-16771696 FORWARD LENGTH=1624
Length=1624
Score = 172 bits (93), Expect = 8e-42
Identities = 263/339 (78%), Gaps = 36/339 (11%)
Strand=Plus/Plus
Query 60 ACAGCATGGG-ATTCTCACGGTGGCTCAACCGCACCGTGGGCTTCTTCGTCTTCT-TCAT 117
||| |||||| ||| ||||||||||||||||||||||||||||||| |||||| || |
Sbjct 75 ACATCATGGGCATT-GCACGGTGGCTCAACCGCACCGTGGGCTTCTTTGTCTTCGCTC-T 132
Query 118 CCTCGACATTG-TGGATTTCTTGCTTTGCTTTAC-CT-ACAAGACTCTTG-ATTTCTTCT 173
||||||||||| || ||||||||||||| || || || |||||||| ||| ||| |||||
Sbjct 133 CCTCGACATTGCTG-ATTTCTTGCTTTG-TT-ACACTTACAAGACT-TTGGATTACTTCT 188
Query 174 TCGAGTCAGAGTGGAAACCCTGCTACTGCTGTCCGCCGCCTGAGGCCAAACCAATCGCGG 233
| || || ||| ||||||| |||||||||| | | || || ||||| ||| ||
Sbjct 189 TGGAATCCGAGAGGAAACCTTGCTACTGCTCTTCTCCACCAGAGGCTAAA------GC-- 240
Query 234 CTGGAGGGAGCAGAGTCGGTAAGATGATAGTGTCGGAAAGATCAGGAGAGTACTCGAAGG 293
| || | | ||| ||||| |||||||||||| || || | |||||| ||||
Sbjct 241 CA--AG--ACC-GAG-----AAGATCATAGTGTCGGAACGA---GGCGGGTACTCAAAGG 287
Query 294 TAGTCTCACTCACAAGGACAAAGATCCATCTGGATGAGATCTCTGACACACTCTACTCAC 353
| || || || ||||| | ||||||||| | ||||||||||| ||||| || |||||||
Sbjct 288 TTGTGTCTCTAACAAGAAGTAAGATCCATTTCGATGAGATCTCGGACACGCTTTACTCAC 347
Query 354 G---CCCTTCACTCCTCACCAGGCTCACTAAGCTGGTGA 389
| ||||||||| || || |||||| ||||||| ||||
Sbjct 348 GTGGCCCTTCACTTCTAACGAGGCTCTCTAAGCTCGTGA 386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81776687805
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5