BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474093
Length=2138
Score E
Sequences producing significant alignments: (Bits) Value
AT1G49580.1 | Symbols: | Calcium-dependent protein kinase (CDP... 3304 0.0
AT3G19100.1 | Symbols: | Protein kinase superfamily protein | ... 1594 0.0
> AT1G49580.1 | Symbols: | Calcium-dependent protein kinase (CDPK)
family protein | chr1:18351458-18354619 FORWARD LENGTH=2209
Length=2209
Score = 3304 bits (1789), Expect = 0.0
Identities = 2021/2131 (95%), Gaps = 24/2131 (1%)
Strand=Plus/Plus
Query 16 GctcctctctctcatgtgatctctctctctctctctctctttcttctctAAAAACCAGAA 75
||| |||| |||||||||| |||||||| ||||||||||||||||||||| ||| ||
Sbjct 39 GCT-CTCTTTCTCATGTGA----TCTCTCTCGCTCTCTCTTTCTTCTCTAAAAGCCAAAA 93
Query 76 CTTTGATGGCATTACTGTGATTTTTCTCTTAAAGCAATCTCC--TTTTTCGCCGGAGATT 133
||| |||||||||||||||||||| ||| ||||| || |||| ||||||||||||||||
Sbjct 94 CTTCGATGGCATTACTGTGATTTTCCTCATAAAGTAAGCTCCTTTTTTTCGCCGGAGATT 153
Query 134 ATGGGAGGCTGTACCTCCAAACCCTCCACTTCCTCCGGCAGACCTAACCCTTTCGCTCCT 193
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 154 ATGGGAGGCTGTACTTCCAAACCCTCCACTTCCTCCGGCAGACCTAACCCTTTCGCTCCC 213
Query 194 GGCAATGACTATCCTCAAATTGACGATTTTGCCCCTGACCATCCCGGTAAATCACCACTT 253
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 214 GGTAATGACTATCCTCAAATTGACGATTTTGCCCCTGACCATCCCGGTAAATCACCAATT 273
Query 254 CCTACCCCTTCCGCCGCAAAGTCCTCTCCTTTCTTTCCCTTTTACACGCCGAGCCCTGCT 313
||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 274 CCTACTCCTTCCGCCGCAAAGGCCTCTCCTTTCTTCCCCTTTTACACGCCGAGCCCTGCT 333
Query 314 CGCCACCGCCGTAATAAGAGCCGCGACGTCGGCggaggaggaggaggagagagTAAGAGC 373
||||||||||| ||||||||||||||||||||| |||||||||||||| |||||
Sbjct 334 CGCCACCGCCGCAATAAGAGCCGCGACGTCGGC------GGAGGAGGAGAGAGCAAGAGT 387
Query 374 TTGACTAGCACGCCGCTTCGTCAATTACGCCGTGCGTTTCACCCTCCGTCTCCGGCGAAA 433
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 TTGACTAGCACGCCTCTCCGTCAATTACGCCGTGCGTTTCACCCTCCGTCTCCGGCGAAA 447
Query 434 CACATACGGGCGGCGCTACGGCGGAGGAAGGGGAAAAAGGAAGCTGCTTTATC-GGCGGC 492
||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct 448 CACATACGGGCGGCGCTACGGCGGAGGAAAGGGAAAAAGGAAGCTGCTTTATCTGG-GGT 506
Query 493 GACGCAGCTAACGACGGAGATCCCGCCGCGGGAGGAGGAAGAGGAATTGGGGCTTGACAA 552
||||||||||||||||||| | |||| ||| ||||||||||||||| | |||||||||||
Sbjct 507 GACGCAGCTAACGACGGAGGTACCGCAGCGTGAGGAGGAAGAGGAAGTAGGGCTTGACAA 566
Query 553 AAGATTTGGTTTTTCTAAAGAGTTTCACAGTAGAGTAGAATTAGGGGAAGAGATTGGACG 612
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 567 AAGATTTGGTTTTTCTAAAGAGTTTCACAGTAGAGTAGAGTTAGGGGAAGAAATTGGACG 626
Query 613 AGGGCATTTTGGGTACACTTGCTCTGCT-AGATTCAAGAAAGGAGAGCTCAAAGGTCAAA 671
||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 627 AGGACATTTTGGGTACACTTGCTCTGCTAAG-TTCAAGAAAGGAGAGCTCAAAGGTCAAG 685
Query 672 TGGTTGCTGTTAAAATCATCCCAAAATCTAAGATGACAACTGCAATTGCTATAGAAGATG 731
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 686 TGGTTGCTGTCAAAATCATCCCAAAATCGAAGATGACAACTGCAATTGCTATAGAAGATG 745
Query 732 TGAGAAGGGAAGTGAAAATTCTACAGGCTTTATCTGGACATAAGAATCTGGTTCAATTCT 791
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 746 TGAGAAGGGAAGTGAAAATTCTACAGGCTTTATCTGGACATAAGAATCTGGTACAATTCT 805
Query 792 ATGATGCATTTGAGGACAATGCAAATGTCTACATTGCGATGGAGTTATGTGAAGGTGGTG 851
||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||
Sbjct 806 ATGATGCATTTGAGGACAATGCAAACGTCTACATTGCAATGGAGCTATGTGAAGGTGGTG 865
Query 852 AACTTCTGGACAGAATACTAGCAAGGGGAGGGAAATACTCGGAGAATGATGCAAAACCAG 911
| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 866 AGCTTCTTGACAGAATACTAGCAAGGGGAGGGAAATACTCAGAGAATGACGCAAAACCAG 925
Query 912 TGATTATACAAATCCTGCATGTGGTAGCTTTTTGTCATCTCCAAGGAGTTGTTCATCGAG 971
||||||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||||
Sbjct 926 TGATTATACAAATTCTGAATGTGGTAGCTTTCTGTCATTTCCAAGGAGTTGTTCATCGAG 985
Query 972 ACCTTAAACCAGAGAACTTCTTGTACACTTCCAAGGAGGAGAATTCTCAGCTTAAAGCGA 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 986 ACCTTAAACCAGAGAACTTCTTGTACACTTCCAAGGAGGAGAATTCTCAGCTTAAAGCGA 1045
Query 1032 TAGACTTTGGCTTATCAGACTTTGTCAGACCAGATGAAAGACTCAACGATATAGTAGGAA 1091
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 1046 TAGACTTTGGCTTATCAGACTTTGTCAGACCAGATGAGAGACTAAACGATATAGTGGGAA 1105
Query 1092 GTGCGTACTACGTAGCTCCTGAAGTTCTACACAGATCATATACAACAGAAGCGGATGTGT 1151
|||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 GTGCATACTATGTAGCTCCCGAAGTTCTACACAGATCATATACAACAGAAGCGGATGTGT 1165
Query 1152 GGAGCATCGGAGTCATAGCATACATTCTACTATGTGGTAGCCGTCCGTTTTGGGCAAGAA 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1166 GGAGCATCGGAGTCATAGCATACATTCTACTATGTGGTAGCCGTCCGTTTTGGGCAAGAA 1225
Query 1212 CTGAATCCGGAATTTTCAGAGCGGTTCTTAAAGCTGACCCGAGTTTCGATGAACCTCCTT 1271
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1226 CTGAATCCGGAATTTTTAGAGCTGTTCTTAAAGCTGACCCGAGTTTCGATGAACCTCCTT 1285
Query 1272 GGCCCTTCTTGTCTTCTGACGCTAAAGACTTTGTTAAGCGGTTATTGTTTAAGGATCCCC 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1286 GGCCCTTCTTGTCTTCTGACGCTAAAGACTTTGTTAAGCGGTTATTGTTTAAGGATCCCC 1345
Query 1332 GGAGAAGAATGTCAGCCTCCCAAGCCTTGATGCATCCTTGGATCCGAGGTTATAATACGG 1391
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1346 GGCGAAGAATGTCAGCCTCCCAAGCCTTGATGCATCCTTGGATCCGAGCTTATAATACGG 1405
Query 1392 ACATGAATATCCCTTTCGATATCTTGATCTTTAGGCAGATGAAGGCGTACTTGCGATCTT 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 ACATGAATATCCCTTTCGATATCTTGATCTTTAGGCAGATGAAGGCGTACTTGCGATCTT 1465
Query 1452 CTTCATTACGCAAAGCTGCTTTGAGGGCGCTGTCCAAGACGTTAATCAAGGATGAAATTC 1511
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1466 CTTCATTACGCAAAGCTGCTTTGAGGGCGCTATCGAAGACGTTAATCAAGGATGAAATTC 1525
Query 1512 TTTACCTGAAAACTCAATTTTCTCTTCTCGCACCAAACAAAGATGGCCTAATCACAATGG 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1526 TTTACCTGAAAACTCAATTTTCTCTTCTCGCACCAAACAAAGATGGCCTAATCACAATGG 1585
Query 1572 ATACCATTAGATTGGCACTTGCAAGCAATGCAACAGAAGCAATGAAAGAATCTCGGATCC 1631
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1586 ATACCATTAGAATGGCACTTGCAAGCAATGCAACAGAAGCAATGAAAGAATCTCGGATCC 1645
Query 1632 CAGAGTTTCTCGCTTTGCTAAATGGACTGCAATACAGAGGAATGGATTTCGAAGAGTTTT 1691
|||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1646 CAGAGTTTCTTGCTTTGCTAAATGGACTTCAATACAGAGGAATGGATTTTGAAGAGTTTT 1705
Query 1692 GTGCAGCTGCCATAAACGTTCATCAGCACGAGTCGCTTGATTGTTGGGAACAGAGCATTC 1751
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1706 GTGCAGCTGCTATAAACGTTCATCAGCACGAGTCGCTTGATTGTTGGGAACAGAGCATTC 1765
Query 1752 GACATGCTTATGAGCTTTTCGACAAGAATGGAAACCGAGCTATTGTCATTGAAGAACTTG 1811
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1766 GACATGCTTATGAGCTTTTCGACAAGAATGGAAACCGAGCTATTGTCATCGAAGAACTTG 1825
Query 1812 CCTCTGAACTTGGTGTTGGACCATCTATACCCGTACATTCGGTTCTACATGATTGGATCA 1871
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1826 CCTCTGAACTTGGTGTTGGACCATCTATACCGGTACATTCAGTTCTACATGATTGGATCA 1885
Query 1872 GACACACTGATGGGAAGCTAAGCTTCTTCGGGTTTGTTAAACTGTTACATGGAGTCTCTG 1931
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1886 GACACACTGATGGAAAGCTTAGCTTCTTCGGGTTTGTTAAACTGTTACATGGAGTCTCTG 1945
Query 1932 TTCGACCCTCAGCGAAAACTACACGGTGAAGATAACGAAG-CTAGCATGACCAAAGCGAA 1990
||||| |||| | ||||||||| |||||||||||||||| | | ||||||| |||||||
Sbjct 1946 TTCGAGCCTCGGGGAAAACTACCCGGTGAAGATAACGAAAACAAACATGACCTAAGCGAA 2005
Query 1991 ATCGATAAAAGA-GAATGTCAAAATCTTTACTCTGATTCTTGGATTGGAATTGGAAATGT 2049
|||| ||||||| || |||||||| ||||||||| | ||||||||||| |||||||||||
Sbjct 2006 ATCG-TAAAAGAAGA-TGTCAAAACCTTTACTCTAAATCTTGGATTGGTATTGGAAATGT 2063
Query 2050 AATAGTTTAGTCAAAGACTGTACAAGAAATGAAAAGTTTCTTACAAGAGCAATTCTAAGA 2109
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 2064 AATAGTTG-GTCAAAGACTGTACAACAAATGAAAAGTTTCTTACAAGAGCAATTCTAAAA 2122
Query 2110 AAAAC-T-GTTGTAATAATATAGTAACAACA 2138
|||| | ||||||||||||||||||| |||
Sbjct 2123 AAAAGATTGTTGTAATAATATAGTAACCACA 2153
> AT3G19100.1 | Symbols: | Protein kinase superfamily protein
| chr3:6605476-6609295 FORWARD LENGTH=2320
Length=2320
Score = 1594 bits (863), Expect = 0.0
Identities = 1528/1836 (83%), Gaps = 98/1836 (5%)
Strand=Plus/Plus
Query 130 GAT-TATGGGAGGCTGTACCTCCAAACCCTCCACTTCCTCCGGCAGACCTAACCCTTTCG 188
||| ||||||||||||||| |||||| ||| | | ||||||| || |||||| |||| ||
Sbjct 201 GATATATGGGAGGCTGTACTTCCAAA-CCTTC-C-TCCTCCGTCAAACCTAATCCTTACG 257
Query 189 CTCCTGGCAATGA--CTATCCT-CAAATTGACGATTTTGCCCCTGAC-CATCCCGGTAAA 244
| || ||| || | | || |||| |||||||| | |||||| | |||||||| |||
Sbjct 258 CACC---CAAAGACGCGGTTCTCCAAAATGACGATTCTACCCCTG-CTCATCCCGGGAAA 313
Query 245 TCACCACTTCCTACCCCTTCCGCCGCAAAGTCCTCTCCTTTCTTTCCC-TTTTACACGCC 303
||||| ||| | | || |||||| |||| |||||||||| |||||| |||||||||||
Sbjct 314 TCACCGGTTCGTTCATCTCCCGCCGTAAAGGCCTCTCCTTT-TTTCCCTTTTTACACGCC 372
Query 304 GAG-CCCTGCTCGCCACCGCCGTAATAAGAGCCGCGACGTCGGCggaggaggaggaggag 362
|| ||| || || ||||||||||| ||||||||||| |||| ||||||||||
Sbjct 373 TAGTCCC-GCCCGGCACCGCCGTAACAAGAGCCGCGA---CGGC------GGAGGAGGAG 422
Query 363 agagTAAGAGC-TTGACTAGCACGCCGCTTCGTCAATTACGC-CGTGCGTTT-CACCCTC 419
||||||||||| || || ||||| || || ||||| | ||| ||||| ||| |||||||
Sbjct 423 AGAGTAAGAGCGTT-ACCAGCACTCCTCTCCGTCAGCT-CGCGCGTGC-TTTCCACCCTC 479
Query 420 CGTCTCCGGCGAAACACATACGGGCGGCGCTACGGCGGAGGAAGGGGAAAAAGGAAGCTG 479
|||| ||||||| ||| ||||||| | || ||||||||||||| ||| ||||| ||||
Sbjct 480 CGTCACCGGCGAGACATATACGGGATGTTCTGCGGCGGAGGAAGGAGAAGAAGGAGGCTG 539
Query 480 CTTTATCGGCGGCGACGCAGCTAACGACGGA-GATCCCGCCGCGGGAGGA-GGAAGAGGA 537
|| | ||||||||| ||||| | || ||| || | | ||| || ||||||||
Sbjct 540 CTCTGCCGGCGGCGAGGCAGC--A-GAAGGAGGA----G--G-AGGA-GAGGGAAGAGG- 587
Query 538 ATTGGGGCTTGACAAAAGATTTGGTTTTTCTAAAGAGTTTCACAGTA-GAGTAGAATTAG 596
| ||||| || ||||||||||| ||||| || ||||| || |||| || | || |||
Sbjct 588 --TAGGGCTGGATAAAAGATTTGGGTTTTCCAAGGAGTTACAGAGTAGGA-TTGAGCTAG 644
Query 597 GGGAAGAGATT-GGACGAGGGCATTTTGGGTACACTTGCTCTGCT-AGATTCAAGAAAGG 654
||||||||||| ||| |||||||||||||||| |||||||||||| || |||||||||||
Sbjct 645 GGGAAGAGATTGGGA-GAGGGCATTTTGGGTATACTTGCTCTGCTAAG-TTCAAGAAAGG 702
Query 655 AGAGCTCAAAGGTCA-AATGGTTGCTGTTAAAATCATCCCAAAATCTAAGATGACAACTG 713
||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||| |||
Sbjct 703 AGAGCTCAAAGATCAGGA-GGTTGCTGTTAAAGTCATCCCAAAATCTAAGATGACATCTG 761
Query 714 CAAT-TGCTATAGAAGATGTGAGAAGGGAAGTGAAAATTCTACAGGCTTTATCTGGACAT 772
|||| | ||||||| ||||||||||| ||||||||||| || | ||| ||||||||||||
Sbjct 762 CAATAT-CTATAGAGGATGTGAGAAGAGAAGTGAAAATACTGCGGGCGTTATCTGGACAT 820
Query 773 -AAGAATCTGGTTCAATTCTATGATGCATTTGAGGACAATGCAAATGTCTACATTGCGAT 831
|| ||| |||| |||||||||||||| || ||||||||||| || || ||||| | ||
Sbjct 821 CAA-AATTTGGTACAATTCTATGATGCGTTCGAGGACAATGCCAACGTTTACATCGTTAT 879
Query 832 GGAGTTATGTGAAGGTGGTGAACTTCTGGACAGAATACTAGCAAGGGGAGGGAAATACTC 891
||||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct 880 GGAGTTATGTGGAGGTGGTGAACTTCTTGACAGGATACTAGCAAGGGGAGGAAAATACTC 939
Query 892 -GGAGAATGATGCAAAACCAGTGATTATACAAATCCTGCATGTGGTAGCTTTTTGTCATC 950
| || ||||||||||| ||||| ||||||| ||||| | || |||||||| |||||||
Sbjct 940 TGAAG-ATGATGCAAAAGCAGTGCTTATACAGATCCTTAACGTCGTAGCTTTCTGTCATC 998
Query 951 TCCAAGGAGTTGTTCATCGAGACCTTAAACCAGAGAACTTCTTGTACACTTCCAAGGAGG 1010
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 999 TCCAAGGAGTTGTTCATCGAGATCTAAAACCAGAGAACTTCTTGTACACTTCCAAGGAGG 1058
Query 1011 AGAATTCTCA-GCTT-AAAG-CGATAGACTTTGGCTTATCAGACTTTGTCAGACCAGATG 1067
|||||||| | | || |||| | ||||| ||||||||||| ||||||||||||||||| |
Sbjct 1059 AGAATTCT-ATG-TTGAAAGTC-ATAGATTTTGGCTTATCGGACTTTGTCAGACCAGACG 1115
Query 1068 AAAGACTCAACGATATAGTAGGAAGTGCGTACTACGTAGCTCCTGAAGTTCTACACAGAT 1127
||||||| || |||||||| |||||||| || |||||||| |||||||||||||||||||
Sbjct 1116 AAAGACTAAATGATATAGTGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTACACAGAT 1175
Query 1128 CATATACAACAGAAGCGGATGTGTGGAGCATCGGAGTCATAGCATACATTCTACTATGTG 1187
| ||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct 1176 CTTATACCACAGAAGCGGATGTATGGAGCATAGGAGTCATAGCATACATTCTCCTATGTG 1235
Query 1188 GTAGCCGTCCGTTTTGGGCAAGAACTGAATCCGGAATTTTCAGAGCGGTTCTTAAAGCTG 1247
| |||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct 1236 GAAGCCGTCCTTTTTGGGCAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAAAAGCTG 1295
Query 1248 A-CCCGAGTTTCGATGAACCTCCTTGGCCCTTC-TTGTC-TTCTGACGCTAAAGACTTTG 1304
| ||| ||||| ||||||||||||||||| ||| || || || ||| || ||||| ||||
Sbjct 1296 ATCCC-AGTTTTGATGAACCTCCTTGGCC-TTCGTTATCCTT-TGAGGCAAAAGATTTTG 1352
Query 1305 TTAAGCGGTTATTGTTTAAGGATCCC-CGGAGAAGAATGTCAGCCTCCCAAGCCTTGATG 1363
||||| | ||||||| ||||| ||| |||| ||||||| | || || ||||| ||||||
Sbjct 1353 TTAAGAGATTATTGTACAAGGA-CCCTCGGAAAAGAATGACTGCATCTCAAGCTTTGATG 1411
Query 1364 CATCCTTGGATC-CGAGGTTATAATACGGACATGAATATCCC-TTTCGATAT-CTTGATC 1420
|||||||||||| || |||||||| | | | || |||||| ||| ||||| || ||||
Sbjct 1412 CATCCTTGGATCGCG-GGTTATAAGAAA-ATA-GA-TATCCCATTT-GATATTCT-GATC 1465
Query 1421 TTTAGGCAGATGAAGGCGTACTTGCGATCTTCTTCATTACGCAAAGCTGCTTTGAGGGCG 1480
|| | |||||| || || |||||| ||||||| || || |||||||||||||||| |||
Sbjct 1466 TTCAAGCAGATCAAAGCATACTTGAGATCTTCGTCTTTGCGCAAAGCTGCTTTGATGGCT 1525
Query 1481 CTGTCCAAGACGTTAATCAAG-GATGAAATTCTTTACCTGAAAACTCAATTTTCTCTTCT 1539
||||||||||| |||| | | |||||| ||||||| |||||| | || ||| | | ||
Sbjct 1526 CTGTCCAAGACATTAA-CTACCGATGAACTTCTTTATCTGAAAGCGCAGTTTGCACA-CT 1583
Query 1540 C-GCACCAAACAAAGATGGCCTAATCACAATGGATACCATTAGATTGGCACTTGCAAGCA 1598
||||| |||||| ||||||| ||||| | |||| ||| ||| |||||||||| | ||
Sbjct 1584 TAGCACCCAACAAAAATGGCCTCATCACTTTAGATAGCATCAGACTGGCACTTGCGA-CA 1642
Query 1599 A-TGCAACAGAAGCAATGAAAGAATCTCGGATCCCAGAGTTTCTCGCTTTGCTAAATGGA 1657
| |||||||||||||||||| ||||| |||||||| || ||||| || ||| ||||||||
Sbjct 1643 AATGCAACAGAAGCAATGAAGGAATCACGGATCCCGGACTTTCTTGCATTGTTAAATGGA 1702
Query 1658 CTGCAATACAGAGGAATGGATTTCGAAGAGTTTTGTGCAGCTGCCATAAACGTTCATCAG 1717
|| ||||||| ||| |||||||| |||||||||||||||||| |||| | ||||||||||
Sbjct 1703 CTTCAATACAAAGGGATGGATTTTGAAGAGTTTTGTGCAGCTTCCATTAGCGTTCATCAG 1762
Query 1718 CACGAGTCGCTTGATTGTTGGGAACAGAGCATTCGACATGCTTATGAGCT-TTTCGACAA 1776
|| ||||| |||||||||||||| ||||||||||| |||||||||||||| ||| || ||
Sbjct 1763 CATGAGTCTCTTGATTGTTGGGAGCAGAGCATTCGTCATGCTTATGAGCTATTT-GA-AA 1820
Query 1777 -GAATGGAAACCGAGCTATTGTCATTGAAGAACTTGCCTCTGAACTTGGTGTTGGACCAT 1835
|||||||||||||| ||| ||||| |||||||| || |||||||||||||||||| |||
Sbjct 1821 TGAATGGAAACCGAGTTATCGTCATCGAAGAACTCGCTTCTGAACTTGGTGTTGGATCAT 1880
Query 1836 CTATACCCG-TACATTCGGTTCTACATGATTGGATCAGACACACTGATGGGAAGCTAAGC 1894
| || |||| | ||| | ||||| |||| ||||| ||||| ||||| |||||||| ||
Sbjct 1881 CCAT-CCCGGTTCATACCATTCTAAATGACTGGATAAGACATACTGACGGGAAGCTGAGT 1939
Query 1895 TTCTTCGGGTTT-GTTAAACTGTTACATGGAGTCTC 1929
||||| |||||| || |||||| | || || |||||
Sbjct 1940 TTCTT-GGGTTTTGTCAAACTGCTGCACGGTGTCTC 1974
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106023551040
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5