BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474106
Length=1603
Score E
Sequences producing significant alignments: (Bits) Value
AT1G49740.1 | Symbols: | PLC-like phosphodiesterases superfami... 2139 0.0
AT3G19310.1 | Symbols: | PLC-like phosphodiesterases superfami... 682 0.0
> AT1G49740.1 | Symbols: | PLC-like phosphodiesterases superfamily
protein | chr1:18407518-18410022 FORWARD LENGTH=1844
Length=1844
Score = 2139 bits (1158), Expect = 0.0
Identities = 1396/1503 (93%), Gaps = 47/1503 (3%)
Strand=Plus/Plus
Query 1 ACCGACACACGCGCACTTCCGTTCACTCtatttttatccttaaaatcctctca-t-ta-t 57
|||||| |||||||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct 1 ACCGACTCACGCGCACTTCCGTTCACTCTATTTTTATCCTTAAAATCCTCTCATTGTATT 60
Query 58 t-catta-ttcattt-tatt-tt---atttgttttcaCGCAAATGCAAACCACCAACCAA 110
| | ||| || |||| | || || || | |||||||||||||||||||||||||| ||
Sbjct 61 TACTTTATTTTATTTGT-TTCTTAGAATCT-TTTTCACGCAAATGCAAACCACCAACAAA 118
Query 111 TCTA-A-TCTAACATCATGATGAAGTAGcttcttg---cttcttcttcttcttcttAAAt 165
|||| | |||| ||| |||||||||||||| |||| ||||||||||||||||||||||
Sbjct 119 TCTATATTCTAGCATGATGATGAAGTAGCTACTTGCTTCTTCTTCTTCTTCTTCTTAAAT 178
Query 166 ttttgggtttttactttttGGCGAAGATAGCCATGTTTCAAAGATTATTACTCTTCCTTC 225
||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 179 TTTGGGGTTTTTACTTTTTGGTGAAGACAGCCATGTTTCAAAGATTATTACTCTTCCTTC 238
Query 226 TCATAGCTCTTCTGGTTCAATCTTCTTTCCTTTTAGAGATTTCCTCTGCTCTCAAGGAAG 285
|||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 TCATTGCTCTTCTGCTCCAATCTTCTTTCCTTTTAGAGATTTCCTCTGCTCTCAAGGAAG 298
Query 286 GAAAAACATGTATAGCAAACAGCAACTGTGACGCTGGATTACACTGCGAAACATGTATAG 345
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 GAAAAACATGTATAACAAACAGCAACTGTGACGCTGGATTACACTGCGAAACATGTATAG 358
Query 346 CCAACACTGATTTTAGACCTAGATGCTCCCGAACCCAACCCATCAACCCCATCTCCAAGG 405
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 359 CCAACACTGATTTTAGACCTAGATGCTCCAGAACCCAACCCATCAACCCCATCACCAAGG 418
Query 406 CAAAGGGATTGCCTTTCAACAAGTATTCATGGTTAACCACACACAACTCCTTTGCTCGTT 465
||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 419 CAAAGGGGTTGCCTTTTAACAAGTATTCATGGTTAACCACACACAACTCTTTTGCTCGTT 478
Query 466 TGGGGGAAGTATCACGGACCGGTTCTG-TGATTTTGGCGCCTACTAACCAGCAAGATTCA 524
||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||
Sbjct 479 TGGGGGAAGTATCACGGACCGGTTCTGCT-ATTTTGGCTCCTACTAACCAGCAAGATTCA 537
Query 525 ATCACAAGCCAACTCAATAATGGTGTAAGAGGGTTTATGCTCGACATGTATGACTTCGAA 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 538 ATCACAAGCCAACTCAATAATGGTGTAAGAGGGTTTATGCTCGACATGTATGACTTCCAA 597
Query 585 AACGATATCTGGCTTTGCCATTCTTTCGACGGAACATGTTTCAATTTCACAGCTTTTCAA 644
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 598 AACGATATCTGGCTTTGCCATTCTTTCGATGGAACATGTTTCAATTTCACCGCTTTTCAA 657
Query 645 CCGGCGATTAACATTTTAAGGGAGTTTCAAGTGTTTCTAGAGAAGAACACAGAGGAAGTT 704
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 658 CCGGCTATTAACATTTTAAGGGAGTTTCAAGTGTTTCTAGAGAAGAACAAAGAGGAAGTT 717
Query 705 GTAACGATTATCATCGAAGACTATGTGAAATCTCCTAAAGGTCTCACAAAAGTGTTTGAT 764
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 718 GTAACGATTATCATCGAAGATTATGTGAAATCGCCTAAAGGTCTCACAAAAGTGTTTGAT 777
Query 765 GCGGCTGGGCT-ACGAAAGTTCATGTTTCCGGTAGCTAGAATGCCCAAAAATGGAGGAGA 823
|||||||| || |||||||||||||||||| ||| |||||||||||||||||||||| ||
Sbjct 778 GCGGCTGG-CTTACGAAAGTTCATGTTTCCAGTATCTAGAATGCCCAAAAATGGAGGGGA 836
Query 824 TTGGCCAAGGCTTGACGACATGGTTCGACAAAACCAACGGTTGCTTGTTTTTACATCTGA 883
|||||||||||||| |||||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct 837 CTGGCCAAGGCTTGATGACATGGTGCGAAAAAACCAACGGTTGCTAGTTTTTACATCCGA 896
Query 884 TTCACATAAAGAAGCAACCGAAGGGATCGCATATCAATGGAAGTATATGGTTGAGAATCA 943
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 897 TTCACATAAAGAAGCAACCGAAGGGATCGCCTATCAATGGAAGTATATGGTTGAGAATCA 956
Query 944 ATATGGAAATGGAGGACTGAAGGTAGGAGTGTGTCCAAATAGAGCTCAATCAGCACCGAT 1003
||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||
Sbjct 957 ATATGGAAATGGAGGGTTGAAGGTAGGAGTGTGTCCAAATAGAGCTCAATCAGCGCCAAT 1016
Query 1004 GAGCGATAAATCGAAATCTCTTGTTCTTGTGAACCATTTCCCTGATGCTGCGGATTTGAT 1063
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1017 GAGCGATAAATCAAAATCTCTTGTTCTTGTGAACCATTTCCCTGATGCTGCGGATGTGAT 1076
Query 1064 AGTAGCATGTAAACAAAACTCTGCTTCTCTTCTTGAATCCATCAAGACATGTTACCAAGC 1123
|||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1077 AGTAGCATGTAAGCAAAACTCAGCTTCTCTTCTTGAATCCATAAAGACATGTTACCAAGC 1136
Query 1124 CGCAGGACAGCGATGGCCTAACTTCATAGCAGTCGATTTCTACAAGAGAAGCGATGGTGG 1183
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 CGCGGGACAGCGATGGCCTAACTTCATAGCAGTCGATTTCTACAAGAGAAGCGATGGTGG 1196
Query 1184 AGGAGCTCCCCAAGCAGTTGATGTTGCGAATGGCAATTTGATATGCGGTTGCGATAACTT 1243
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 AGGAGCTCCGCAAGCGGTTGATGTTGCGAATGGCAATTTGATATGCGGTTGCGATAACTT 1256
Query 1244 TGCAACGTGCAAGGGTGACGGCAAGTGTGGATAGCAAAAAAGACTGAGCCACCAGAAGCA 1303
|||| ||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||
Sbjct 1257 TGCAGCGTGCAAGGCTGACGGCAAATGTGGATAGTAAGAAAGACTGAGCCACCAGAAGCA 1316
Query 1304 ACTCCCATAACCAAAAGGCTTTCTGCGTTTGTTGTCACCTTTGTGTCATCTCTTCCATAA 1363
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1317 ACTCCCATAACCAAA-GGCTTTCTGCGTTTGTTGTCACCTTTGTGTCATCTTTTCCATAA 1375
Query 1364 AGTTTGAAGCTTTTCGTGTAGTAACGGTTAGTTTTTGTTTT---T------G---T-A-- 1408
||||| | ||| |||||||||||||||||||||||||| | | | |
Sbjct 1376 AGTTTTA-GCTA---GTGTAGTAACGGTTAGTTTTTGTTTTAGATTATTTAGAGATTAGT 1431
Query 1409 A-TG----G-TTAGTTTCATTATTCTAAATTTCCTAATCATATACGAACTAGTCACCGAA 1462
| || | |||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1432 ACTGTACTGGTTAGTTTCATTACTCTAAATTTCCTAATCATATATGAACTAGTCACCGAA 1491
Query 1463 TAA 1465
|||
Sbjct 1492 TAA 1494
> AT3G19310.1 | Symbols: | PLC-like phosphodiesterases superfamily
protein | chr3:6694196-6696214 FORWARD LENGTH=1327
Length=1327
Score = 682 bits (369), Expect = 0.0
Identities = 769/959 (80%), Gaps = 40/959 (4%)
Strand=Plus/Plus
Query 272 TGCTCTCAAGGAAGGAAAAACATGTATAGCAAAC-AGCAACTGTGA-CGCTGGATTACAC 329
||| |||||||||||| ||||||| || | | | || || ||||| || |||||||||
Sbjct 139 TGCCCTCAAGGAAGGAGAAACATGCATCGTGAGCAAG-AATTGTGATCG-GGGATTACAC 196
Query 330 TGCGAAACATGTATAGCCAAC-ACTGA-TTTTAGACCTAGATGCTCCCGAACCCAACCCA 387
|| ||| | ||| | |||| | | | | ||| |||||||||||||||||| |||||||
Sbjct 197 TGTGAATCGTGTCTCGCCAGCGA-T-AGTTTCCGACCTAGATGCTCCCGAATGCAACCCA 254
Query 388 TCAACCCCATCTCCAAGG-CAAAGGGATTGCCTTTCAACAAGTATTCATGGTTAACCACA 446
| ||||| | | |||||| |||||| ||||||| ||||||||| ||||||||||| ||
Sbjct 255 TTAACCCGACCACCAAGGTAAAAGGG-TTGCCTTACAACAAGTACTCATGGTTAACAACC 313
Query 447 CACAACTCCTTTGCTCGTTTGGG-GGAAGTATCACGG-ACCGGTTCTGTGATT-TTGGCG 503
||||| || |||||||| |||| | || |||| || || || ||| ||||| || ||
Sbjct 314 CACAATTCATTTGCTCGAATGGGTGCAA-AATCA-GGCACTGGCTCTATGATTCTT-GCA 370
Query 504 CCTACTAACCAGCAAGATTCAATCACAAGCCAACTCAATAATGGTGTAAGAGGGTTTATG 563
||| | ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 371 CCTTCCAACCAACAAGATTCAATCACAAGCCAACTCCTTAATGGTGTTAGAGGGTTTATG 430
Query 564 CTCGACATGTATGACTTCGAAAACGATATCTGGCTTTGCCATTCTTTCGACGGAACA-TG 622
|| ||| |||| |||||| |||||||||| |||||||||||||||| || |||| | ||
Sbjct 431 CTTGACTTGTACGACTTCCAAAACGATATATGGCTTTGCCATTCTTACGGTGGAA-ATTG 489
Query 623 TTTCAATTTCACAGCTTTTCAACCGGCGATTAACATTTTAAGGGAGTTTCAAGTGTTTCT 682
|||||||| ||| || || ||||| ||| |||||||||||| ||||||||||||||||||
Sbjct 490 TTTCAATTACACCGCATTCCAACCCGCGGTTAACATTTTAAAGGAGTTTCAAGTGTTTCT 549
Query 683 AGAGAAGAACACA-GAGGAAGTTGTAACGATTATCATCGAAGACTATGTGAAATCTCCTA 741
||| ||||||| | || | ||||||||| ||||| |||| |||||||||||||||||||
Sbjct 550 AGACAAGAACA-AGGATGTTGTTGTAACGCTTATCCTCGAGGACTATGTGAAATCTCCTA 608
Query 742 AAGGTCTCACAAAAGTGTTTGATGCGGCTGGGCTACGAAAGTTCATGTTTCCGGTAGCTA 801
| ||| | || | |||||||||||| | || ||||||| ||||||||||||||| | |
Sbjct 609 ATGGTTTAACCAGAGTGTTTGATGCATCCGGATTACGAAACTTCATGTTTCCGGTATCAA 668
Query 802 GAATGCCCAAAAATGGAGGAGATTGGCCAAGGCTTGACGACATGGT-TCGACAAAACCAA 860
||||||| ||||| |||| ||||||||| | ||||| || ||| | | | || ||||||
Sbjct 669 GAATGCCTAAAAACGGAGAAGATTGGCCTACTCTTGATGATATGATAT-GTCAGAACCAA 727
Query 861 CGGTTGCTTGTTTTTACATCTGATTCACATAAAGAAGCAACCGAAGGG-ATCGCATATCA 919
|| ||||||||||| || ||| || | || |||||||| || |||| || || | |
Sbjct 728 CGATTGCTTGTTTTCACGTCTAATCCTCAAAAAGAAGC-GTCGGAGGGAATTGCGT-T-T 784
Query 920 ATG-GAAG-TATATGGTTGAGAATCAATATGGAAATGGA-GGACTGAAGG-TAGGAGTGT 975
||| | || || ||| | ||||||||||||||| ||||| ||| |||||| | |||||||
Sbjct 785 ATGTGGAGATACATGATAGAGAATCAATATGGAGATGGAGGGA-TGAAGGCT-GGAGTGT 842
Query 976 GT-CCAAATAGAGCTCAATCAGCACCGATGAGCGATAAATCGAA-ATCTCTTGTTCTTGT 1033
|| || |||||| | |||||| | ||| | |||| ||| || ||| ||| |||| ||
Sbjct 843 GTACC-AATAGACCGGAATCAGTTGCAATGGGAGATAGATC-AAGATCACTTATTCTAGT 900
Query 1034 GAACCATTTCCCTGATGCTGCGGATTTGATAGTAGCATGTAAACAAAACTCTGCTTCTCT 1093
|| |||| || ||| |||| ||| |||| | | | ||||| || ||||||||| ||||
Sbjct 901 CAATTATTTTCCGGATACTGCAGATGTGATCGGATCTTGTAAGCAGAACTCTGCTCCTCT 960
Query 1094 TCTTGA-ATCCATC-AAGACATGTTACCAAGCCGCAGGACAGCGATGGCCTAACTTCATA 1151
|||||| | || || || || ||| | ||||| | ||| | || ||||||||||||||
Sbjct 961 TCTTGACA-CCGTCAAAAAC-TGTCAAGAAGCCTCGGGAAAACGTTGGCCTAACTTCATT 1018
Query 1152 GCAGTCGATTTCTACAAGAGAAGCGATGGTGGAGGAGCTCCCCAAGCAGTTGATGTTGC 1210
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1019 GCAGTCGATTTCTACAAGAGAAGCGATGGTGGAGGAGCTCCAAAAGCAGTGGATGTTGC 1077
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79166259465
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5