BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474143
Length=1113
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50090.1 | Symbols: | D-aminoacid aminotransferase-like PLP... 1759 0.0
AT1G50110.1 | Symbols: | D-aminoacid aminotransferase-like PLP... 1223 0.0
> AT1G50090.1 | Symbols: | D-aminoacid aminotransferase-like PLP-dependent
enzymes superfamily protein | chr1:18554641-18556794
REVERSE LENGTH=1104
Length=1104
Score = 1759 bits (952), Expect = 0.0
Identities = 1052/1101 (96%), Gaps = 4/1101 (0%)
Strand=Plus/Plus
Query 1 ATGGCTCCTTCTGTGCACCCTTCTTCATCACCTCTTCTTACAAGTAAAGCCGATGAAAAG 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1 ATGGCTCCTTCTGTGCACCCTTCTTCATCACCTCTTTTTACAAGTAAAGCCGATGAAAAG 60
Query 61 TATGCGAATGTAAAATGGGACGAGCTGGGATTCGCACTGGTTCCAACAGATTATATGTAT 120
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 61 TATGCGAATGTAAAATGGGATGAGCTCGGATTCGCACTGGTTCCAACAGATTATATGTAT 120
Query 121 GTGGCGAAATGCAAACAAGGAGAGAGCTTTTCAAAAGGAGAGATTGTTCCTTATGGGGAT 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 121 GTGGCGAAATGCAAACAAGGAGAGAGCTTTTCAACAGGAGAGATTGTTCCTTATGGGGAT 180
Query 181 ATTTCAATAAGCCCTTGTGCTGGGATTCTCAATTATGGCCAGGGACTATTTGAAGGTCTC 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ATTTCTATAAGCCCTTGTGCTGGGATTCTCAATTATGGCCAGGGACTATTTGAAGGTCTC 240
Query 241 AAGGCTTATAGGACAGAAGACAGACGGATCACACTCTTCCGGCCTGACCAAAACACTCTT 300
|||||||| |||||||||||| | ||||||||||||||||| |||||||||||| || ||
Sbjct 241 AAGGCTTACAGGACAGAAGACGGTCGGATCACACTCTTCCGACCTGACCAAAACGCTATT 300
Query 301 CGTATGCAAACAGGTGCAGATAGGCTTTGTATGATACCTCCTTCCCCGGAACAATTCGTT 360
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 301 CGTATGCAAACAGGTGCAGATAGGCTTTGTATGACACCTCCTTCCCCGGAGCAATTCGTT 360
Query 361 GAAGCAGTTAAGCAAACTGTGCTTGCCAACAACACATGGGTACCTCCTCCAGGTAAAGGA 420
|||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||
Sbjct 361 GAAGCAGTTAAGCAAACTGTGCTTGCCAACAACAAATGGGTACCTCCTCCGGGGAAAGGA 420
Query 421 GCTTTGTATATTAGGCCTCTACTCATAGGTACTGGTGCTGTCCTTGGAATAGCTTCAGCT 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 421 GCTTTGTATATTAGGCCTCTACTCATAGGTACTGGTGCTGTCCTTGGAGTAGCTTCAGCT 480
Query 481 CCTGAATATACGTTCCTCATTTACACATCTCCCGTAGGAAATTATCACAAGGCAAGCTCA 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 481 CCTGAATATACGTTCCTCATTTACACATCTCCCGTGGGAAATTATCACAAGGCAAGCTCA 540
Query 541 GGCTTGAACCTCAAAGTTGATCATAACCATCGCCGAGCCCACTTTGGTGGAACAGGTGGT 600
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 541 GGCTTGAACCTCAAAGTTGATCATAACCATCGCCGAGCCCACTTCGGTGGAACAGGGGGT 600
Query 601 GTGAAGAGCTGCACAAATTATTCTCCAGTTGTGAAATCGTTGATCGAAGCAAAGTCATCG 660
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 601 GTGAAGAGCTGCACAAATTATTCTCCAGTTGTAAAATCGTTGATCGAAGCAAAGTCTTCG 660
Query 661 GGTTTCTCTGATGTCTTGTTCCTGGATGCGGCAACTGGTAAAAACATCGAAGAGGTTTCT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GGTTTCTCTGATGTCTTGTTCCTGGATGCGGCAACTGGTAAAAACATCGAAGAGGTTTCT 720
Query 721 ACTTGTAACATCTTCATTCTAAAGGTAAACATTGTATCCACTCCACCAACTTCAGGAACC 780
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 721 ACTTGTAACATCTTCATTCTAAAGGGAAACATTGTATCCACTCCCCCAACTTCAGGAACC 780
Query 781 ATTTTACCAGGAATCACAAGGAAAAGCATAAGTGAGCTAGCTCGTGATATTGGCTACCAG 840
||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||| ||
Sbjct 781 ATTTTACCAGGAATCACAAGGAAGAGCATATGTGAGCTAGCCCGTGACATTGGCTATGAG 840
Query 841 GTTCAAGAACGCGATGTTTCTGTGGATGAGCTATTAGAGGCAGAAGAAGTTTTCTGCACT 900
||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||||
Sbjct 841 GTTCAAGAACGTGATCTTTCTGTGGATGAGCTATTAGAGGCAGAGGAAGTTTTTTGCACG 900
Query 901 GGGACAGCAATGGTCGTTAAAGCTGTTGAAACCGTGAC-TTACCATGACAAAAGGGTAAA 959
||||| ||| ||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct 901 GGGACGGCAGTGGTCATTAAAGCTGTTGAAACCGTGACATT-CCATGACAAAAGGGTAAA 959
Query 960 ATATAGAACAGGAGAAGAAGCATTGTCTACGAAGCTTCACTTGATATTAACCAATATTCA 1019
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 960 ATATAGAACAGGAGAAGAAGCATTCTCTACGAAGCTTCACTTGATATTAACTAATATTCA 1019
Query 1020 AATGGGAGTTGTCGAAGATAAGAAGGGTTGGATTG-TGGAAATCGATCATTTTACTGTAA 1078
||||||||||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct 1020 AATGGGAGTTGTCGAAGATAAGAAGGGTTGGAT-GATGGAGATCGATCATTTGGTTGGAA 1078
Query 1079 CAGATTCGTTTCCTGATGAAA 1099
|||||||||||||||||||||
Sbjct 1079 CAGATTCGTTTCCTGATGAAA 1099
> AT1G50110.1 | Symbols: | D-aminoacid aminotransferase-like PLP-dependent
enzymes superfamily protein | chr1:18558017-18560274
REVERSE LENGTH=1312
Length=1312
Score = 1223 bits (662), Expect = 0.0
Identities = 931/1060 (88%), Gaps = 21/1060 (2%)
Strand=Plus/Plus
Query 19 CCTTCTTCATCACCTCTTC-T--TACAAGT-AAAGCCGATGAAAAGTATGCGAATGTAAA 74
||||||||||||||||||| | ||||||| ||| | |||||||| ||||||||||| ||
Sbjct 62 CCTTCTTCATCACCTCTTCGTACTACAAGTGAAA-CAGATGAAAAATATGCGAATGTCAA 120
Query 75 ATGGGACGAGCTGGGATTCGCACTGGTTCCAACAGATTATATGTATGTGGCGAAATGCAA 134
|||||| ||||| |||||||| ||| ||||| ||||||||||||||| || |||||||
Sbjct 121 ATGGGAAGAGCTTGGATTCGCTCTGACTCCAATAGATTATATGTATGTAGCCAAATGCAG 180
Query 135 ACAAGGAGAGAGCTTTTCA-AAAGGAGAGATTGTTCCTTATGGGGATATTTCAATAAGCC 193
|||||||||||||||| || || ||| |||||||||||||||| || |||||||| ||||
Sbjct 181 ACAAGGAGAGAGCTTTACACAAGGGA-AGATTGTTCCTTATGGCGACATTTCAATTAGCC 239
Query 194 CTTGTGCTGGGATTCTCAATTATGGCCAGGGACTATTTGAAGGTCTCAAGGCTTATAGGA 253
||||| || |||||||||||| |||||||||||||||||||||||||| ||||| || |
Sbjct 240 CTTGTTCTCCGATTCTCAATTACGGCCAGGGACTATTTGAAGGTCTCAAAGCTTACAGAA 299
Query 254 CAGAAGACAGA-CGGATCA-CACTCTTCCGGCCTGACCAAAACACTCTTCGTATGCAAAC 311
|||||||| || ||||| | | | |||||||||||||||||| ||||||| ||||||||
Sbjct 300 CAGAAGAC-GACCGGATTAGGA-TTTTCCGGCCTGACCAAAACGCTCTTCGCATGCAAAC 357
Query 312 AGGTGCAGATAGGCTTTGTATGATACCTCCTTCCCCGGAACAATTCGTTGAAGCAGTTAA 371
||||| || ||||||||||||| ||||||| | | |||||||| || || ||||||||
Sbjct 358 TGGTGCGGAGAGGCTTTGTATGACACCTCCTACTCTAGAACAATTTGTCGAGGCAGTTAA 417
Query 372 GCAAACTGTGCTTGCCAACAACACATGGGTACCTCCTCCAGGTAAAGGAGCTTTGTATAT 431
||||||||||||||||||||| | |||||| |||||||| ||||||||| || |||||||
Sbjct 418 GCAAACTGTGCTTGCCAACAAGAAATGGGTTCCTCCTCCGGGTAAAGGAACTCTGTATAT 477
Query 432 TAGGCCTCTACT-CATAGGTACTGGTGCTGTCCTTGGAATAGCTTCAGCTCCTGAATATA 490
|||||||| || | |||| | ||||||| ||||||| ||||| |||| |||||||| |
Sbjct 478 AAGGCCTCTGCTAC-TAGGGAGTGGTGCTACCCTTGGAGTAGCTCCAGCACCTGAATACA 536
Query 491 CGTTCCTCATTTACACATCTCCCGTAGGAAATTATCACAAGGCAAGCTCAGGCTTGAACC 550
| || ||||| || |||||||||||||| |||| || |||| |||||||||||||||||
Sbjct 537 CTTTTCTCATATATGCATCTCCCGTAGGAGATTACCATAAGGTAAGCTCAGGCTTGAACC 596
Query 551 TCAAAGTTGATCATAACCATCGCCGAGCCCACTTT-GGTGGAACAGGTGGTGTGAAGAGC 609
|||||||||||||||| ||| ||||||||| || |||||||| || ||||| ||||||
Sbjct 597 TCAAAGTTGATCATAAGTATCACCGAGCCCA-TTCAGGTGGAACGGGGGGTGTCAAGAGC 655
Query 610 TGCACAAATTATTCTCCAGTTGTGAAATCGTTGA-TCGAAGCAAAGTCATCGGGTTTCTC 668
|||||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||||
Sbjct 656 TGCACAAACTATTCTCCAGTTGTGAAATCGTT-ACTCGAAGCAAAGTCAGCGGGTTTCTC 714
Query 669 TGATGTCTTGTTCCTGGATGCGGCAACTGGTAAAAACATCGAAGAGGTTTCTACTTGTAA 728
||||||| ||||||||||||| |||||||||| ||||||||||||| || || |||||||
Sbjct 715 TGATGTCCTGTTCCTGGATGCAGCAACTGGTAGAAACATCGAAGAGCTTACTGCTTGTAA 774
Query 729 CATCTTCATTCTAAAGGTAAACATTGTATCCACTCCACCAACTTCAGGAACCATTTTACC 788
|||||||||| | |||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 775 CATCTTCATTGTCAAGGGAAACATTGTATCCACCCCACCAACTTCAGGAACCATTTTACC 834
Query 789 AGGAATCACAAGGAAAAGCATAAGTGAGCTAGCTCGTGATATTGGCTACCAGGTTC-AAG 847
||| |||| |||||||||||||||||||| |||| |||||||||||||||||| | |||
Sbjct 835 TGGAGTCACGAGGAAAAGCATAAGTGAGCTGGCTCATGATATTGGCTACCAGGT-CGAAG 893
Query 848 AACGCGATGTTTCTGTGGATGAGCTATTAGAGGCAGAAGAAGTTTTCTGCACTGGGACAG 907
|||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |
Sbjct 894 AACGCGATGTATCTGTGGATGAGCTACTAGAGGCAGAAGAAGTTTTCTGCACAGGGACTG 953
Query 908 CAATGGTCGTTAAAGCTGTTGAAACCGTGAC-TTACCATGACAAAAGGGTAAAATATAGA 966
|| |||||||||||||||||||||| ||||| || ||||||||||| ||||||||| ||
Sbjct 954 CAGTGGTCGTTAAAGCTGTTGAAACTGTGACCTT-CCATGACAAAAAGGTAAAATACAGG 1012
Query 967 ACAGGAGAAGAAGCATTGTCTACGAAGCTTCACTTGATATTAACCAATATTCAAATGGGA 1026
|||||||||| ||||||||||||||||||||||| ||| || ||||||||||| ||||||
Sbjct 1013 ACAGGAGAAGCAGCATTGTCTACGAAGCTTCACTCGATGTTGACCAATATTCAGATGGGA 1072
Query 1027 GTTGTCGAAGATAAGAAGGGTTGGATTGTGGAAATCGATC 1066
||||| ||||||||||| |||||||| ||||| || ||||
Sbjct 1073 GTTGTTGAAGATAAGAAAGGTTGGATGGTGGACATTGATC 1112
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54567992415
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5