BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474163
Length=3959
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucle... 6106 0.0
AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6948774-6956966 F... 1229 0.0
AT1G42680.1 | Symbols: | P-loop containing nucleoside triphosp... 425 1e-117
> AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleoside
triphosphate hydrolases superfamily protein | chr1:18649747-18657376
FORWARD LENGTH=4149
Length=4149
Score = 6106 bits (3306), Expect = 0.0
Identities = 3668/3842 (95%), Gaps = 28/3842 (1%)
Strand=Plus/Plus
Query 53 tccttttttCCGATC-TTCTCTCCAATTTTATCAGTCGCCA-TTGTTACTGTTAAACCCC 110
||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 106 TCCATTTTTCTGATCTTTCTCTCCAATTTTATCAGTCGCCATTTGTTACTGTTAAACCCC 165
Query 111 AACTGTTATATATCTTTCTTTTTCTTCCACAatat-atat-atatatTCCT-TAtttttt 167
||||||||||| ||||| || |||||||| || || | | || || | || |||| |||
Sbjct 166 AACTGTTATATCTCTTT-TTCTTCTTCCAAAACATGTTTTAAT-TAAT-CTATATTCTTT 222
Query 168 tCA----TTGTTTCCTGAGttttttttttACATTCAGGATCACCGAATTTATTCACAGAT 223
||| |||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 223 TCATTGTTTGTTTCCTGAG------TTTTACATTCAGGATCACCGAATTTATTCAGAGAT 276
Query 224 TGTGA--ATTTTGTGTGTATGATTGAGATCGATCTCATCGGGGAATTCAATTTCATACGA 281
|| | ||||||||||||||||||||||||||||||||| ||||||||||| || ||
Sbjct 277 TGCCATTCTTTTGTGTGTATGATTGAGATCGATCTCATCGGCGAATTCAATTTTGTATGA 336
Query 282 TTCTGAAATTTCTCCATTACAGTTGGTTTCTGACTGGC-GGGTTT-T-CTCATTTTTGAG 338
|||||| |||||||| || ||| ||||||||| |||| |||||| | || ||||||||
Sbjct 337 ATCTGAAGTTTCTCCAATAAAGTGGGTTTCTGATTGGCGGGGTTTCTCCTTTTTTTTGAG 396
Query 339 TTTCTAAGTTTTATTTGAAAGGAAAATGTCACACAAGGTTAAGCCATCTATTCAGTCACT 398
||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct 397 TTTCTAA----AATTTGAAAGGAAAATGGCACACAAGGTTAAGGCATCTTTTCAGTCACT 452
Query 399 TAAATCGATGCCCGCTGACTATAGATTTCTTGGTTCACCAATCTCTGGTCCCCCTGAGAC 458
|||| ||||||| |||||||||||||||||||||||||||||||||| || || ||||||
Sbjct 453 TAAAACGATGCCGGCTGACTATAGATTTCTTGGTTCACCAATCTCTGATCACCTTGAGAC 512
Query 459 CAATTTGATTATTCCACCAAATGGTCACTTAAAGAATGGGGTCAATGGCACTGAAAGTTC 518
||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 513 CAATTTGATTACTCCACCAAATGGTCACTTAAAGAATGGGGTTAATGGCACTGCAAGTTC 572
Query 519 TGTTGGTGGAATGGATAGTGCTAATGAGGATTCACCGTATAGCGTGCGCAGCATTTCAAA 578
|||||||||||||||||||| ||||||||||||||| ||||| || |||||||||| |||
Sbjct 573 TGTTGGTGGAATGGATAGTGTTAATGAGGATTCACCTTATAGTGTCCGCAGCATTTTAAA 632
Query 579 TGGAGTGCGGTCTTCAATTAGTGATGGAGATTCTAATTTGCCCTTGCCTCAGAGTAATGA 638
||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct 633 TGGAGAGCGGTCTTCAATTGGTGATGGAGATTCTATTTTGCCCTTGCCTGAGAGTAATGA 692
Query 639 TCGCAGGTGGAGCGATACAAGTGCATATGCTCGGAAAAAGGTACTGCAATTTTGGGTCCA 698
||||| ||||||||| |||| || ||||||||||||||||||||||||||||||||||||
Sbjct 693 TCGCAAGTGGAGCGACACAAATGTATATGCTCGGAAAAAGGTACTGCAATTTTGGGTCCA 752
Query 699 ACTTCCAAACGGTAACTGGGAGCTGGGGAAGATAGTGTCAACTTCAGGAGAAGAGTCTGT 758
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 753 ACTTCCAAACGGTAACTGGGAGCTGGGAAAGATAATGTCAACTTCAGGAGAAGAGTCTGT 812
Query 759 TATTGTGGTACCTGAGGGAAAAGTTTTAAAAGTCAGATCAGAGACGTTAGTACCGGCAAA 818
||| |||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||
Sbjct 813 TATCGTGGTAACTGAGGGAAAAGTTTTAAAAGTCAAATCAGAGACTTTAGTACCTGCAAA 872
Query 819 TCCTGATATTCTTGATGGAGTAGACGATCTCATGCAACTAAGTTATTTAAATGAGCCAGC 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 TCCTGATATTCTTGATGGAGTAGACGATCTCATGCAACTAAGTTATTTAAATGAGCCAGC 932
Query 879 AGTGTTGTACAACCTTGAGTATAGGTACAACCAGGACATGATATATACAAAAGCGGGGCC 938
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 933 AGTGTTGTACAACCTTGAGTATAGGTACAACCAGGACATGATATATACAAAAGCAGGGCC 992
Query 939 TGTACTGGTGGCTGTGAATCCCTTCAAGGAGGTTCCTTTGTATGGAAATCGCAATATTGA 998
|| |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct 993 GGTTCTGGTGGCTGTGAATCCCTTCAAGGAGGTTCCTTTGTACGGTAATCGCAACATTGA 1052
Query 999 AGCATACAGGAAGAGATCAAATGAGAGCCCTCATGTCTATGCCATTGCAGATACAGCAAT 1058
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1053 AGCATACAGGAAGAGATCAAATGAGAGCCCTCATGTCTATGCTATTGCAGATACAGCAAT 1112
Query 1059 ACGTGAAATGATACGAGATGAAGTTAACCAATCAATCATTATCAGCGGAGAGAGTGGAGC 1118
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1113 ACGTGAAATGATACGAGATGAAGTTAACCAATCAATCATTATCAGTGGAGAGAGTGGAGC 1172
Query 1119 AGGAAAAACTGAGACAGCAAAGATAGCAATGCAATACTTGGCTGCTCTTGGAGGTGGAAG 1178
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1173 AGGAAAGACTGAGACAGCAAAGATAGCGATGCAATACTTGGCTGCTCTTGGAGGTGGAAG 1232
Query 1179 TGGGATCGAGTATGAGATACTAAAGACTAATCCCATCTTGGAAGCATTTGGAAATGCAAA 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233 TGGGATCGAGTATGAGATACTAAAGACTAATCCCATCTTGGAAGCATTTGGAAATGCAAA 1292
Query 1239 AACATTGAGAAACGATAATTCTAGTCGTTTTGGTAAGTTGATAGAGATTCATTTTAGTGA 1298
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1293 AACATTGAGAAACGATAATTCTAGTCGTTTTGGTAAGTTGATAGAAATTCATTTTAGTGA 1352
Query 1299 AACAGGGAAGATTTCGGGTGCTCAAATTCAAACATTTTTACTAGAAAAGTCAAGAGTGGT 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1353 AACAGGGAAGATTTCGGGTGCTCAAATTCAAACATTTTTACTAGAAAAGTCAAGAGTGGT 1412
Query 1359 TCAATGTACGGAAGGAGAAAGGTCATATCATATCTTTTATCAACTGTGTGCTGGGGCTTC 1418
||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 1413 TCAATGTACGGAAGGAGAAAGGTCATATCATATATTCTATCAACTTTGTGCTGGGGCTTC 1472
Query 1419 ACCTACACTTAGAGAGAAGCTAAATTTGACAAGCGCAAAACAGTATAAATATTTGAAACA 1478
||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct 1473 ACCTACACTTAGAGAGAAGTTAAATTTGACAAGTGCAAAACAGTATAACTATTTGAAACA 1532
Query 1479 GAGCAATTGCTATTCAATTAACGGAGTTGATGACGCTGAACGTTTTCACACCGTGAAGGA 1538
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 1533 AAGCAATTGCTATTCAATTAACGGAGTTGATGACGCTGAACGTTTTCACGCCGTTAAGGA 1592
Query 1539 AGCTTTAGATGTTGTGCATGTTAGTAAAGAAGATCAAGAAAGTGTATTTGCAATGCTTGC 1598
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1593 AGCTTTAGATATTGTGCATGTTAGTAAAGAAGATCAAGAAAATGTATTTGCAATGCTTGC 1652
Query 1599 TGCAGTATTATGGCTGGGGAATGTTTCCTTTACCATTATTGACAACGAAAATCACGTTGA 1658
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1653 TGCAGTATTATGGCTAGGGAATGTTTCTTTTACCATTATTGACAACGAAAATCACGTTGA 1712
Query 1659 ACCTGAACCAGATGAAAGTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGA 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1713 ACCTGAACCAGATGAAAGTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGA 1772
Query 1719 GCTTAAGCTAGCTCTATCAAAGCGTAATATGAGAGTTAATAATGATACTATTGTACAGAA 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1773 GCTTAAGCTAGCTCTATCAAAGCGTAATATGAGAGTTAATAATGATACTATTGTACAGAA 1832
Query 1779 GCTAACACTATCGCAGGCCATTGACGCAAGAGATGCTTTAGCAAAGTCAATCTATGCCTG 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833 GCTAACACTATCGCAGGCCATTGACGCAAGAGATGCTTTAGCAAAGTCAATCTATGCCTG 1892
Query 1839 CCTATTCGACTGGCTGGTTGAACAGATAAACAAATCTCTTGCGGTGGGAAAGAGGAGAAC 1898
|||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1893 CCTATTTGACTGGCTAGTTGAACAGATTAACAAATCTCTTGCGGTGGGAAAGAGGAGAAC 1952
Query 1899 TGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTCAATAAAAATAGTTT 1958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1953 TGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTCAATAAAAATAGTTT 2012
Query 1959 TGAGCAGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACTTCAATCGTCATCT 2018
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2013 TGAGCAGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACTTCAACCGTCATCT 2072
Query 2019 CTTCAAGCTTGAGCAGGAGGAATATATACAGGATGGCATTGACTGGACAAGGGTTGATTT 2078
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2073 CTTCAAGCTTGAGCAGGAGGAATATATTCAGGATGGCATTGACTGGACAAGGGTTGATTT 2132
Query 2079 TGAGGACAACCAAGATTGTCTCAGTCTCTTTGAAAAGAAACCATTAGGCCTGCTTTCTCT 2138
||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 2133 TGAGGACAACCAAGAATGTCTTAGTCTCTTTGAAAAGAAACCATTAGGGCTGCTTTCTCT 2192
Query 2139 TCTGGATGAAGAATCCACATTTCCAAATGGCACAGATTTGACACTTGCCAACAAGCTTAA 2198
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2193 TCTGGATGAGGAATCCACATTTCCAAATGGCACAGATTTGACACTTGCCAACAAGCTTAA 2252
Query 2199 ACAACATCTAAATGATAATTCCTGTTTTAGAGGAGATCGGGGGAAGGTTTTCACAGTTGC 2258
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2253 ACAACATCTAAATGATAATTCCTGTTTTAGAGGAGATCGGGGGAAGGCTTTCACAGTTGC 2312
Query 2259 ACATTATGCTGGAGAGGTTACATATGAGACCACTGGATTTCTAGAGAAGAACCGAGATTT 2318
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2313 GCATTATGCTGGAGAGGTTACATATGAGACGACTGGATTTCTAGAGAAGAACCGAGATTT 2372
Query 2319 GTTGCATTCGGATTCTATTCAACTTTTGTCATCTTGCTCTTGCCACCTTCCTCAGGCGTT 2378
||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 2373 GTTGCATTCAGATTCTATTCAACTTTTGTCGTCTTGCTCTTGCCACCTCCCTCAGGCGTT 2432
Query 2379 TGCTTCTAGTATGCTCATTCATTCTGAAAAACCTGTTTTCGGTCCTTTACACAAAGCAGG 2438
||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 2433 TGCTTCTAGTATGCTCATTTATTCTGAAAAACCTCTTGTCGGTCCTTTACACAAAGCAGG 2492
Query 2439 TGGAGCTGATTCCCAGCGACTGAGTGTAGCAACTAAATTTAAGGGTCAACTTTTCCAATT 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2493 TGGAGCTGATTCCCAGCGACTGAGTGTAGCAACTAAATTTAAGGGTCAACTTTTCCAATT 2552
Query 2499 GATGCAACGTCTAGGGAATACTACCCCACATTTCATTCGCTGCATAAAGCCAAACAATGT 2558
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 2553 GATGCAACGTCTAGGGAACACTACCCCACATTTTATTCGCTGCATAAAGCCAAACAATGT 2612
Query 2559 TCAGTCTCCCGGGTTGTATGAGCAAGGGCTTGTCTTACAGCAGCTAAGATGTTGTGGGGT 2618
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2613 TCAGTCTGCCGGGTTGTATGAGCAAGGACTTGTCTTACAGCAGCTAAGATGTTGTGGTGT 2672
Query 2619 CCTAGAGGTGGTTCGAATATCCCGGTCTGGATTTCCCACAAGAATGTCTCATCATAAATT 2678
||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 2673 CCTAGAGGTCGTTCGAATATCCCGGTCTGGATTTCCCACGAGAATGTTTCATCATAAATT 2732
Query 2679 TGCCCGAAGGTATGGTTTCCTTCTGCTGGAGAACATTGCAGCAAAAGATCCACTAAGTGT 2738
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2733 TGCCCGAAGGTATGGTTTCCTTCTGCTGGAGAACATTGCAGCAAAAGATCCTCTAAGTGT 2792
Query 2739 TTCGGTTGCGATTCTCCATCAGTTTAATATCTTGCCGGAGATGTACCAAGTTGGCTACAC 2798
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2793 TTCGGTTGCAATTCTCCATCAGTTTAATATCTTGCCAGAGATGTACCAAGTTGGCTACAC 2852
Query 2799 AAAATTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGATACAAGGAATCGCACTCT 2858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2853 AAAATTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGATACAAGGAATCGCACTCT 2912
Query 2859 GCATGGCATTTTACGTCTTCAAAGTTATTTTAGAGGGCACCAAGCACGCTGTCGTCTAAA 2918
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2913 GCATGGCATTTTACGTCTTCAAAGTTATTTTAGAGGGCACCAAGCTCGCTGTCGTCTAAA 2972
Query 2919 AGAGCTTAAAAGAGGAATTACTGTTCTTCAATCATTTGTTCGTGGAAAAAAGATAAGAAA 2978
||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||
Sbjct 2973 AGAGCTTAAAACCGGAATTACTATTCTTCAATCATTTGTTCGTGGAGAAAAGATGAGAAA 3032
Query 2979 GGAATACACGGAGTTACTGCAGAGGCATCGAGCTTCTGCTGCTATACAAAGCCATGTTAA 3038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3033 GGAATACACGGAGTTACTGCAGAGGCATCGAGCTTCTGCTGCTATACAAAGCCATGTTAA 3092
Query 3039 GAGAAGGATTGCTAGCCGACAGTATAAAGCCACAGTTGATGCATCTGTTGTAATACAATC 3098
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3093 GAGAAGGATTGCTAGCCAACAGTATAAAGCCACAGTTGATGCATCTGCTGTAATACAATC 3152
Query 3099 AGCAATTCGCGGCGAGCTGGTTAGAAGATGCGCGGGGGATATTGGATGGCTAAATTCTGG 3158
||||||||| || ||||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct 3153 AGCAATTCGTGGAGAGCTGGTTAGAAGATGTGCGGGGGATATTGGATGGCTTAGTTCTGG 3212
Query 3159 TGGCACCAAGAGAAATGAGTCAGACGAGGTGCTAGTGAAGGCATCATATCTTTCCGAACT 3218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3213 TGGCACCAAGAGAAATGAGTCAGACGAGGTGCTAGTGAAGGCATCATATCTTTCCGATCT 3272
Query 3219 TCAGCGTAGGGTTCTTAGAACCGAAGCTGCTCTTCGTGAGAAAGAAGAGGAGAACGACAT 3278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3273 TCAGCGTAGGGTTCTTAGAACCGAAGCTGCTCTTCGTGAGAAAGAAGAGGAGAACGACAT 3332
Query 3279 CCTCCGACAAAGACTCCAGCAGTACGATAACCGGTGGTCTGAATATGAAACAAAGATGAA 3338
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3333 CCTCCGACAAAGAGTCCAGCAGTACGATAACCGGTGGTCTGAATATGAAACAAAGATGAA 3392
Query 3339 ATCCATGGAAGAAATTTGGCAAAGGCAGATGAAATCTTTGCAATCCAGTCTTTCCATTGC 3398
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 3393 ATCCATGGAAGAAATTTGGCAAAAGCAGATGAAATCTTTGCAATCCAGTCTTTCCATCGC 3452
Query 3399 AAAGAAAAGCCTAGAGGTTGACGACTCGGCGAGAAACTCGGATGCATCGGTGAATGCAAG 3458
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 3453 AAAGAAAAGCCTAGAGGTTGAGGACTCAGCGAGAAACTCGGATGCATCGGTGAATGCAAG 3512
Query 3459 TGATGCAACGGATTTAGATTCAGGAGGTAGTCATTACCAAATGGGCCATGGCAGGTCAAG 3518
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3513 CGATGCAACAGATTTAGATTCAGGAGGTAGTCATTACCAAATGGGCCATGGCAGGTCAAG 3572
Query 3519 AAGTGTAGGTGTGGGTTTAAGCGTGATAAGCCGGTTAGCTGAGGAATTCGGACAAAGAGC 3578
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3573 AAGTGTAGGCGTGGGTTTAAGCGTGATAAGCCGGTTAGCTGAGGAATTTGGACAAAGAGC 3632
Query 3579 TCAGGTGTTTGGTGACGACAGAAAGTTCTTGATGGAGGTGAAATCTGGTCAGGTGGAAGC 3638
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3633 TCAGGTATTTGGTGACGACAGAAAGTTCTTGATGGAAGTGAAATCTGGTCAGGTGGAAGC 3692
Query 3639 AAACTTGAATCCGGACCGGGAGCTACGAAGGCTGAAACAGATGTTTGAGACATGGAAGAA 3698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3693 AAACTTGAATCCGGACCGGGAGCTACGAAGGCTGAAACAGATGTTTGAGACATGGAAGAA 3752
Query 3699 GGATTATGGAGGGAGACTAAGGGAAACGAAACTGATACTAAGCAAACTTGGGAGTGAAGA 3758
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3753 AGATTATGGAGGGAGACTAAGGGAAACGAAACTGATACTTAGCAAACTTGGGAGTGAAGA 3812
Query 3759 AACAGGTGGTTCAGCGGAGAAGGTGAAGATGAAGTGGTGGGGGAGGTTGAAGAGTACTAG 3818
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 3813 AACAGGTGGTTCAGCGGAGAAGGTGAAGATGAATTGGTGGGGGAGGTTGAGGAGTACTAG 3872
Query 3819 GTTTTAGTGGTTTCTTCCTTTCCTTGAGACGCACGTCTCttttttttACACGTTTGATGT 3878
|| ||| ||||| |||||||| ||||||||||||||||| |||| | |||||||||||||
Sbjct 3873 GTATTAATGGTTACTTCCTTTTCTTGAGACGCACGTCTCCTTTTCT-ACACGTTTGATGT 3931
Query 3879 AA 3880
||
Sbjct 3932 AA 3933
> AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6948774-6956966
FORWARD LENGTH=4094
Length=4094
Score = 1229 bits (665), Expect = 0.0
Identities = 859/955 (90%), Gaps = 4/955 (0%)
Strand=Plus/Plus
Query 1676 GTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGAGCTTAAGCTAGCTCTAT 1735
|||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||
Sbjct 1781 GTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGAGCTTACGCTAACTTTAT 1840
Query 1736 C-AAAGCGTAATATGAGAGTTAATAATGATACTATTGTACAGAAGCTAACACTATCGCAG 1794
| ||| ||||| |||||||||| |||||||| ||||||||||||||||| ||| | |||
Sbjct 1841 CGAAA-CGTAACATGAGAGTTAGGAATGATACCATTGTACAGAAGCTAACGCTACCACAG 1899
Query 1795 GCCATTGACGCAAGAGATGCTTTAGCAAAGTCAATCTATGCCTGCCTATTCGACTGGCTG 1854
|||||||| |||||||||||||||||||| ||||||||| | ||||| || |||||||||
Sbjct 1900 GCCATTGATGCAAGAGATGCTTTAGCAAAATCAATCTATTCGTGCCTGTTTGACTGGCTG 1959
Query 1855 GTTGAACAGATAAACAAATCTCTTGCGGTGGGAAAGAGGAGAACTGGCAGATCCATCAGC 1914
||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct 1960 GTTGAACAGATCAACAAATCTCTTGCTGTGGGAAAGAGGCGAACTGGCAGATCTATCAGT 2019
Query 1915 ATTCTTGATATCTATGGCTTTGAATCATTCAATAAAAATAGTTTTGAGCAGTTCTGTATA 1974
|||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||
Sbjct 2020 ATTCTTGATATCTACGGCTTTGAATCATTTGATAAAAATAGCTTCGAGCAGTTCTGTATA 2079
Query 1975 AATTATGCAAATGAGAGATTGCAGCAACACTTCAATCGTCATCTCTTCAAGCTTGAGCAG 2034
|||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||
Sbjct 2080 AATTATGCAAATGAGAGATTGCAGCAACACTTTAACCGTCATCTATTCAAGCTGGAGCAA 2139
Query 2035 GAGGAATATATACAGGATGGCATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAGAT 2094
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2140 GAGGAATATATCCAGGATGGCATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAAAT 2199
Query 2095 TGTCTCAGTCTCTTTGAAAAGAAACCATTAGGCCTGCTTTCTCTTCTGGATGAAGAATCC 2154
||||| ||||| ||||||||||||||||| || ||||| || ||| ||||||| |||||
Sbjct 2200 TGTCTGAGTCTTTTTGAAAAGAAACCATTGGGGCTGCTCTCCCTTTTGGATGAGGAATCT 2259
Query 2155 ACATTTCCAAATGGCACAGATTTGACACTTGCCAACAAGCTTAAACAACATCTAAA-TGA 2213
|||||||| ||||||||||||||||||||||| |||||||| ||||| |||||| | |
Sbjct 2260 ACATTTCCGAATGGCACAGATTTGACACTTGCAAACAAGCTAAAACAGCATCTACAGTC- 2318
Query 2214 TAATTCCTGTTTTAGAGGAGATCGGGGGAAGGTTTTCACAGTTGCACATTATGCTGGAGA 2273
|||||| ||||| ||||||||| |||||| |||||||||||| |||||||| |||||
Sbjct 2319 TAATTCATGTTTCAGAGGAGATAAAGGGAAGCTTTTCACAGTTGTGCATTATGCAGGAGA 2378
Query 2274 GGTTACATATGAGACCACTGGATTTCTAGAGAAGAACCGAGATTTGTTGCATTCGGATTC 2333
||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||
Sbjct 2379 GGTTACATATGAGACGACTGGATTTCTAGAGAAGAATAGAGACTTGTTGCATTCGGATTC 2438
Query 2334 TATTCAACTTTTGTCATCTTGCTCTTGCCACCTTCCTCAGGCGTTTGCTTCTAGTATGCT 2393
||||||||||||||| ||||| ||||||| ||||||||| || ||||||||||| |||||
Sbjct 2439 TATTCAACTTTTGTCCTCTTGTTCTTGCCTCCTTCCTCAAGCATTTGCTTCTAGCATGCT 2498
Query 2394 CATTCATTCTGAAAAACCTGTTTTCGGTCCTTTACACAAAGCAGGTGGAGCTGATTCCCA 2453
|| || ||||||||||| ||| | ||||||||| ||||||||||||| |||||||||||
Sbjct 2499 GATCCAATCTGAAAAACCCGTTGTGGGTCCTTTATACAAAGCAGGTGGTGCTGATTCCCA 2558
Query 2454 GCGACTGAGTGTAGCAACTAAATTTAAGGGTCAACTTTTCCAATTGATGCAACGTCTAGG 2513
||| |||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||
Sbjct 2559 GCGTTTGAGTGTAGCTACTAAATTTAAGAGTCAACTCTTCCAATTGATGCAACGTTTAGG 2618
Query 2514 GAATACTACCCCACATTTCATTCGCTGCATAAAGCCAAACAATGTTCAGTCTCCCGGGTT 2573
|| ||||||||||||||||||||||| || |||||||| || | |||||||||||| |
Sbjct 2619 AAACACTACCCCACATTTCATTCGCTGTATCAAGCCAAATAACATCCAGTCTCCCGGGGT 2678
Query 2574 GTATGAGCAAGGGCTTGTCTTACAGCAGCTAAGATGTTGTGGGGTCCTAGAGGTG 2628
|||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 2679 GTATGAGCAAGGGCTTGTTTTACAGCAGCTAAGATGTTGTGGGGTCCTAGAAGTG 2733
Score = 904 bits (489), Expect = 0.0
Identities = 899/1092 (82%), Gaps = 47/1092 (4%)
Strand=Plus/Plus
Query 2744 TTGCGATTCTCCATCAGTTTAATATCTTGCCGGAGATGTACCAAGTTGGCTACACAAAAT 2803
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 2768 TTGCGATTCTCCATCAGTTTAATATCTTGCCGGAGATGTATCAAGTTGGCTACACAAAGT 2827
Query 2804 TGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGATACAAGGAATCGCACTCTGCATG 2863
|||||||||||||||||||||||||||||||||| || |||||||| || ||||| || |
Sbjct 2828 TGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAGGACACAAGGAACCGTACTCTCCACG 2887
Query 2864 GCATTTTACGTCTTCAAAGTTATTTTAGAGGGCACCAAGCACGCTGTCGTC-TAAAAGAG 2922
||||||||||| ||||||||| ||||||||| ||||||||||||||| || | || ||
Sbjct 2888 GCATTTTACGTGTTCAAAGTTCTTTTAGAGGATACCAAGCACGCTGTC-TCCTGAAGGAA 2946
Query 2923 CTTAAAAGAGGAATTACTGTTCTTCAATCATTTGTTCGTGGAAAAAAGATAAGAAAGGAA 2982
|||||||| |||||| || |||| |||||||||||||||||| | ||||||||||| ||
Sbjct 2947 CTTAAAAGGGGAATTTCTATTCTCCAATCATTTGTTCGTGGAGAGAAGATAAGAAAAGAG 3006
Query 2983 TACACGGAGTTACTGCAG-AGGCATCGAG-CTTCTGCTGCTATACAAAGCCATGTTAAGA 3040
| | ||||||| | || |||||| || || ||||| ||||||| ||||| ||||| |
Sbjct 3007 TTTGCTGAGTTAC-GAAGGAGGCATA-AGGCTGCTGCTACTATACAGAGCCAAGTTAAAA 3064
Query 3041 G-AAGGATTGCTAGCCGACAGTATAAAGCCACAGTTGATGCATCTGTTGTAATACAATCA 3099
| ||| |||||||| ||||||||| | || || |||||||| ||||| |||||||||
Sbjct 3065 GCAAG-ATTGCTAGGATACAGTATAAGGGCATAGCCGATGCATCAGTTGTGATACAATCA 3123
Query 3100 GCAATTCGCGGC-GAGCTGGTTAGAAGATGCGCGGGGGATATTGGATGGCTAAATTCTGG 3158
|||||||| || | | ||||||||||||| | ||||||||||||||| |||| |||||
Sbjct 3124 GCAATTCGTGGTTG-GTTGGTTAGAAGATGTTCAGGGGATATTGGATGGTTAAAATCTGG 3182
Query 3159 TGGCACCAAGAGAAATGAGTCAGACGAGGTGCTAGTGAAGGCATCA-TATCTTTCCGAAC 3217
|| |||||| |||||||| || |||||||||||||| |||||| || |||||||| |
Sbjct 3183 AGGTGCCAAGACAAATGAGTTAGGTGAGGTGCTAGTGAAAGCATCAGTA-CTTTCCGAGC 3241
Query 3218 TTCAGCGTAGGGTTCTTAGAACCG-AAGCTGCTCTTCGTGAGAAAG-AAGAGGAGAACGA 3275
| || || ||||| |||| || || |||||||||| ||||| |||| |||| ||||||||
Sbjct 3242 TCCAACGCAGGGTACTTA-AAGCGGAAGCTGCTCTGCGTGA-AAAGGAAGAAGAGAACGA 3299
Query 3276 CATCCTCC-GACAAAGACTCCAGCAGTACGATAACCGGTGGTCTGAATATGAAACAAAGA 3334
||| || | | || || || || || || || ||||||||||| || ||||| |||||||
Sbjct 3300 CATTCTTCAG-CAGAGGCTTCAACAATATGAGAACCGGTGGTCAGAGTATGAGACAAAGA 3358
Query 3335 TGAAATCCATGGAAGAAATTTGGCAAAGGCAGATGAAATCTTTGCAATCCAGTCTTTCCA 3394
||||||| ||||||||||| ||||||| ||| |||| || ||||| |||||||||||||
Sbjct 3359 TGAAATCAATGGAAGAAATCTGGCAAAAGCAAATGAGGTCGTTGCAGTCCAGTCTTTCCA 3418
Query 3395 TTGCAAAGAAAAGCCTAGAGGTTGACGACTCGGCGAGAAACTCGGATGCATCGGTGAATG 3454
| |||||||||||| ||| ||||| ||||| ||||||||||| |||||||| || ||||
Sbjct 3419 TAGCAAAGAAAAGCTTAGCTGTTGAGGACTCAGCGAGAAACTCAGATGCATCTGTCAATG 3478
Query 3455 CAAGTGATGCAACGGATTTAGATTCAGG-AGGTAGTCA-TT-A----CCAAATGGGCCAT 3507
| ||||||||||| |||| |||||| | || || ||| || | ||||| || ||
Sbjct 3479 CGAGTGATGCAACAGATTGGGATTCAAGCAG-TAATCAGTTCAGGAGCCAAACAAGCAAT 3537
Query 3508 GGC--AGG-TCAAGA--AGTG--TA-G-GTGT-GGGTTTAAGCGTGATAAGCCGGTTAGC 3557
|| ||| |||||| | | || | | | ||| | | ||||||| | ||||||||
Sbjct 3538 GGAGTAGGGTCAAGACTACAGCCTATGAGCGCAGGGCTGA-GCGTGATTGGGCGGTTAGC 3596
Query 3558 TGAGGAATTCG-GACAAAGAGCTCAGGTGTTTGGTGACGACAG-AAAGTTCTTGATGGAG 3615
|| ||||||| | || |||||||| ||||||||||| || | |||||||||| ||||
Sbjct 3597 AGAAGAATTCGAG-CAGAGAGCTCAAGTGTTTGGTGATGAT-GCAAAGTTCTTGGTGGAA 3654
Query 3616 GTGAAATCTGGTCAGGTGGAAGCAAACTTGAATCCGGACCGGGAGCT-ACGAAGGCTGAA 3674
|||||||||||||||||||||||||||||| | || ||| | || || | || |||||||
Sbjct 3655 GTGAAATCTGGTCAGGTGGAAGCAAACTTGGACCCAGACAGAGAACTGAGGA-GGCTGAA 3713
Query 3675 ACAGATGTTTGAGACATGGAAGAAGGATTATGGAGGGAGACTAAGGGAAACGAAACTGAT 3734
||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||
Sbjct 3714 ACAGATGTTTGAGACGTGGAAAAAGGATTATGGAGGGAGATTGCGGGAAACGAAACTGAT 3773
Query 3735 ACTAAGCAAACTTGGGAGTGAAGAAA-CAGGTGGTTC-AGCGGAGAAGGTGAAGATGAAG 3792
||| ||||| || ||||| ||||| | ||| |||||| | |||||| ||||||| ||||
Sbjct 3774 ACTGAGCAAGCTCGGGAGCGAAGAGAGCAG-TGGTTCGAT-GGAGAAAGTGAAGAGGAAG 3831
Query 3793 TGGTGGGGGAGG 3804
|||||||| |||
Sbjct 3832 TGGTGGGGAAGG 3843
Score = 765 bits (414), Expect = 0.0
Identities = 525/580 (91%), Gaps = 2/580 (0%)
Strand=Plus/Plus
Query 1101 CAGCGGAGAGAGTGGAGCAGGAAAAACTGAGACAGC-AAAGATAGCAATGCAATACTTGG 1159
|||||| |||||||||||||| ||||||||||| || ||| ||||| |||||||||||||
Sbjct 1143 CAGCGGCGAGAGTGGAGCAGGGAAAACTGAGACTGCTAAA-ATAGCTATGCAATACTTGG 1201
Query 1160 CTGCTCTTGGAGGTGGAAGTGGGATCGAGTATGAGATACTAAAGACTAATCCCATCTTGG 1219
||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||
Sbjct 1202 CTGCTCTTGGAGGCGGAAGCGGGATCGAATATGAGATACTTAAGACTAATCCCATTTTGG 1261
Query 1220 AAGCATTTGGAAATGCAAAAACATTGAGAAACGATAATTCTAGTCGTTTTGGTAAGTTGA 1279
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |
Sbjct 1262 AAGCATTTGGAAATGCAAAAACATTGAGAAATGATAATTCTAGTCGTTTTGGGAAGCTAA 1321
Query 1280 TAGAGATTCATTTTAGTGAAACAGGGAAGATTTCGGGTGCTCAAATTCAAACATTTTTAC 1339
||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||
Sbjct 1322 TAGAGATTCATTTTAGTGAAAGTGGAAAGATATCGGGTGCTCAAATTCAAACCTTTTTAC 1381
Query 1340 TAGAAAAGTCAAGAGTGGTTCAATGTACGGAAGGAGAAAGGTCATATCATATCTTTTATC 1399
|||||||||| |||||||| |||||| | ||||| ||||||||||||||||| |||||||
Sbjct 1382 TAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGGGAAAGGTCATATCATATTTTTTATC 1441
Query 1400 AACTGTGTGCTGGGGCTTCACCTACACTTAGAGAGAAGCTAAATTTGACAAGCGCAAAAC 1459
|||| |||||||||||||||||| |||||||||||||||||||| |||||||||| |
Sbjct 1442 AACTTTGTGCTGGGGCTTCACCTGCACTTAGAGAGAAGCTAAATCTGACAAGCGCCCATG 1501
Query 1460 AGTATAAATATTTGAAACAGAGCAATTGCTATTCAATTAACGGAGTTGATGACGCTGAAC 1519
|||||||||||||| |||||| ||||| |||||||||||||||||||| || |||||||
Sbjct 1502 AGTATAAATATTTGGGACAGAGTAATTGTTATTCAATTAACGGAGTTGACGATGCTGAAC 1561
Query 1520 GTTTTCACACCGTGAAGGAAGCTTTAGATGTTGTGCATGTTAGTAAAGAAGATCAAGAAA 1579
|||||||||| || ||||||||| | || ||||||||||||||||||||||||||||||
Sbjct 1562 GTTTTCACACTGTTAAGGAAGCTCTGGACATTGTGCATGTTAGTAAAGAAGATCAAGAAA 1621
Query 1580 GTGTATTTGCAATGCTTGCTGCAGTATTATGGCTGGGGAATGTTTCCTTTACCATTATTG 1639
||||||||||||||||||||||||| ||||||||||| || |||||||| ||| ||||||
Sbjct 1622 GTGTATTTGCAATGCTTGCTGCAGTTTTATGGCTGGGAAACGTTTCCTTCACCGTTATTG 1681
Query 1640 ACAACGAAAATCACGTTGAACCTGAACCAGATGAAAGTTT 1679
|||| ||||| || |||||||||| | |||||||||||||
Sbjct 1682 ACAATGAAAACCATGTTGAACCTGTAGCAGATGAAAGTTT 1721
> AT1G42680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:16041656-16042880
FORWARD LENGTH=513
Length=513
Score = 425 bits (230), Expect = 1e-117
Identities = 273/291 (94%), Gaps = 14/291 (5%)
Strand=Plus/Plus
Query 1101 CAGCGGAGAGAGTGGAGCAGGAAAAACTGAGACAGCAAAGATAGCAATGCAATACTTGGC 1160
|||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct 165 CAGCGGAGAGAGTGGAGCAGGAAAGACTGAGACAACAAAGATAGCGATGCAATACTTGGC 224
Query 1161 TGCTCTTGGAGGTGGAAGTGGGATCGAGTATGAGATACTAAAGACTAATCCCATCTTGGA 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 TGCTCTTGGAGGTGGAAGTGGGATCGAGTATGAGATACTAAAGACTAATCCCATCTTGGA 284
Query 1221 AGCATTTGGAAATGCAAAAACATTGAGAAACGATAATTCTAGTCGTTTTGGTAAGTTGAT 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 AGCATTTGGAAATGCAAAAACATTGAGAAACGATAATTCTAGTCGTTTTGGTAAGTTGAT 344
Query 1281 AGAGATTCATTTTAGTGAAACAGGGAAGATTTCGGGTGCTCAAATTCAAACATTTTTACT 1340
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 345 AGAAATTCATTTTAGTGAAACAGGGAAGATTTCGGGTGCTCAAATTCAAACATT----C- 399
Query 1341 AGAAAAGTCAAGAGTGGTTCAATGTACGGAAGGAGAAAGGTCATATCATAT 1391
| | | | | |||||||||||||||||||||||||||||||||||||
Sbjct 400 A-A---G--A-G--TGGTTCAATGTACGGAAGGAGAAAGGTCATATCATAT 441
Score = 89.8 bits (48), Expect = 2e-16
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 1550 TTGTGCATGTTAGTAAAGAAGATCAAGAAAGTGTATTTGCAATGCTTGCTGCAGTAT 1606
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 443 TTGTGCATGATAGTAAAGAAGATCAAGAAAGTGTATTTGCAATTTTTGCTGCAGTAT 499
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 197256419876
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5