BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474164
Length=1448
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50370.1 | Symbols: | Calcineurin-like metallo-phosphoester... 2324 0.0
AT3G19980.1 | Symbols: ATFYPP3, EMB2736, STPP, FYPP3 | flower-s... 1253 0.0
> AT1G50370.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr1:18658647-18661974 FORWARD LENGTH=1461
Length=1461
Score = 2324 bits (1258), Expect = 0.0
Identities = 1403/1468 (96%), Gaps = 29/1468 (2%)
Strand=Plus/Plus
Query 1 GATGGAGGAAGACCAAATTGGGTTTGGGTCCAGATTGTTTGGTTCGTTGTGTTTCCCCTT 60
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct 3 GATGGAGGAAGACCAAATCGGGTTCGGGTCGAGATTGTTTGGTTCGTTGTGTTTCCCCTT 62
Query 61 TCTCTCTCTTTCTCCCTCTTT-CCTCTTACGTAACCCTAACGAAGCGGACGGAGCAATGC 119
|||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||
Sbjct 63 TCTCTCTC--TCTCCCTCTTTCCCCCTTACGTAACCCT----AAGCGGACGGAGCAATGC 116
Query 120 TCTGCTAGATCTATCCTTGC-TTCAATTCCCCCACCAAAGATCGTCGATACTCGCCATTG 178
|||||||||||||| ||| | ||||||| | ||||| |||||||||| |||| ||||||
Sbjct 117 TCTGCTAGATCTAT-CTTTCTTTCAATT-CTTCACCAGAGATCGTCGAGACTCACCATTG 174
Query 179 AAATCGACGAAACAGCACCAATTTCTACTT---CACC--------G-CA-AGAGAGGATA 225
||||||| ||||||||||||||||| |||| |||| | | ||||||||||
Sbjct 175 AAATCGAAGAAACAGCACCAATTTCCACTTCACCACCGAAAGAGAGAGACAGAGAGGATA 234
Query 226 ATAAAAGGCCGCCATGGATTTAGATCAATGGATTTCCAAGGTTAAAGACGGCCAACATCT 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 ATAAAAGGCCGCCATGGATTTAGATCAATGGATTTCCAAGGTTAAAGACGGCCAACATCT 294
Query 286 CTCTGAAGACGAGCTTCAACTTCTCTGCGAATACGTGAAAGAAATTCTTATTGAGGAATC 345
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 CTCTGAGGACGAGCTTCAACTTCTCTGCGAATACGTGAAAGAAATTCTTATTGAGGAATC 354
Query 346 TAATGTACAACCTGTCAACAGTCCTGTCACCGTCTGTGGTGATATCCATGGCCAGTTTCA 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 AAATGTACAACCTGTCAACAGTCCTGTCACCGTCTGTGGTGATATCCATGGCCAGTTTCA 414
Query 406 TGATCTAATGAAGCTTTTCCAGACCGGAGGTCATGTTCCCGAGACAAATTACATATTTAT 465
|||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 415 TGATCTTATGAAACTTTTCCAGACCGGAGGTCATGTTCCCGAGACCAATTACATATTTAT 474
Query 466 GGGGGATTTCGTTGATAGAGGTTACAACAGTCTTGAAGTTTTCACCATTCTTTTGCTTCT 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 GGGGGATTTCGTTGATAGAGGTTACAACAGTCTTGAAGTTTTCACCATTCTTTTGCTTCT 534
Query 526 TAAAGCAAGACATCCAGCCAATATCACACTTTTGCGTGGAAATCATGAAAGTAGACAGCT 585
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 535 TAAAGCAAGACATCCAGCCAATATCACTCTTTTGCGTGGAAATCATGAAAGTAGACAGCT 594
Query 586 AACTCAGGTGTATGGTTTCTATGACGAATGCCAAAGGAAGTATGGTAATGCTAATGCATG 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 595 AACTCAGGTGTATGGTTTCTATGACGAATGCCAAAGGAAGTATGGTAATGCTAATGCTTG 654
Query 646 GAGATATTGCACGGATGTTTTTGACTATCTCACACTTTCAGCTATTATAGATGGAACTGT 705
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 655 GAGATATTGCACGGATGTTTTTGACTATCTTACACTTTCAGCTATTATAGATGGCACTGT 714
Query 706 TCTATGTGTTCATGGTGGCCTTTCACCTGATGTACGGACAATTGACCAGATAAGATTGAT 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 715 TCTATGTGTTCATGGTGGCCTTTCACCTGATGTACGGACAATTGACCAGATAAGATTGAT 774
Query 766 TGAGCGGAATTGCGAAATACCGCATGAAGGACCCTTCTGTGATCTTATGTGGAGTGATCC 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 TGAGCGGAATTGCGAAATACCGCATGAAGGACCCTTCTGTGATCTTATGTGGAGTGATCC 834
Query 826 TGAAGATATTGAAACATGGGCTGTCAGTCCACGTGGAGCTGGTTGGCTTTTTGGGTCCAG 885
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 835 TGAAGATATTGAAACATGGGCTGTCAGTCCACGTGGAGCTGGTTGGCTTTTCGGGTCCAG 894
Query 886 GGTTACCACTGAGTTTAACCATATTAACAATCTTGATCTAGTATGTCGTGCTCACCAGCT 945
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 895 GGTTACCACTGAGTTTAACCATATTAACAATCTTGATCTAGTATGTCGCGCTCACCAGCT 954
Query 946 TGTACAAGAAGGTCTCAAGTACATGTTCCAAGATAAAGGTCTTGTAACTGTGTGGTCTGC 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 TGTACAAGAAGGTCTCAAGTACATGTTCCAAGATAAAGGTCTTGTAACTGTGTGGTCTGC 1014
Query 1006 ACCTAATTACTGCTACCGCTGTGGGAATGTGGCTTCTATATTGAGTTTCAATGACAACAT 1065
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 GCCTAATTACTGCTACCGTTGTGGGAATGTGGCTTCTATATTGAGTTTCAATGACAACAT 1074
Query 1066 GGAAAGGGAAGTGAAATTCTTCACGGAGACAGAAGAGAACAATCAAATGAGAGGGCCAAG 1125
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 GGAAAGGGAAGTGAAGTTCTTCACGGAGACAGAAGAGAACAATCAAATGAGAGGGCCAAG 1134
Query 1126 AACAGGTGTTCCTTATTTCCTGTGATTCATGATGATGATCCTACATCGTTATTAGTTTCG 1185
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1135 GACAGGTGTTCCTTATTTCCTGTGATTCATGATGATGATCCTACATCATTATTAGTCTCG 1194
Query 1186 TATTGCTCTGATCAAGTTAGCCATTATCATGATTGCCATTGGCTTATGTTCTTTTCAAGG 1245
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1195 TATTGCTCTTATCAAGTTAGCCATTATCATGATTGCCATTGGCTTATGTTCTTT-CAAGG 1253
Query 1246 TATATCTTCTGATGTTGTTTACACTTGCATTGTTTCTT----CCTTTTTCCATTTTGGAA 1301
|||||||||||||||||||||||||| |||||||| || ||||||||||||||||||
Sbjct 1254 TATATCTTCTGATGTTGTTTACACTTCCATTGTTTTTTTTTTCCTTTTTCCATTTTGGAA 1313
Query 1302 ACATTTTCTTGTGAAAGTGAATGTCACTTTGGTAATTTTAGTGGTTTTGATGCACTTTAA 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 ACATTTTCTTGTGAAAGTGAATGTCACTTTGGTAATTTTAGTGGTTTTGATGCACTTTAA 1373
Query 1362 CCTCAACTTCTTCTGGATGTTATTATTATACGTGCTT-CTTTCTTGTTTTGTTTCATCTT 1420
||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1374 CCTGAACCTCTTCTGGATGTTATTATTATACGTGCTTTCTTTCTTGTTTTGTTTCATCTT 1433
Query 1421 TGTTCTGTATGCAAGACCAATTTTTATC 1448
||||||||| ||||||||||||||||||
Sbjct 1434 TGTTCTGTAAGCAAGACCAATTTTTATC 1461
> AT3G19980.1 | Symbols: ATFYPP3, EMB2736, STPP, FYPP3 | flower-specific,
phytochrome-associated protein phosphatase 3 | chr3:6961736-6965108
FORWARD LENGTH=1531
Length=1531
Score = 1253 bits (678), Expect = 0.0
Identities = 834/912 (91%), Gaps = 0/912 (0%)
Strand=Plus/Plus
Query 239 ATGGATTTAGATCAATGGATTTCCAAGGTTAAAGACGGCCAACATCTCTCTGAAGACGAG 298
|||||||| |||||||||||||||||||||||||| || || |||||||| |||||||||
Sbjct 273 ATGGATTTGGATCAATGGATTTCCAAGGTTAAAGATGGTCAGCATCTCTCCGAAGACGAG 332
Query 299 CTTCAACTTCTCTGCGAATACGTGAAAGAAATTCTTATTGAGGAATCTAATGTACAACCT 358
||||| ||||||||||||||||||||||| ||||| |||||||| || || ||||| |||
Sbjct 333 CTTCAGCTTCTCTGCGAATACGTGAAAGAGATTCTGATTGAGGAGTCAAACGTACAGCCT 392
Query 359 GTCAACAGTCCTGTCACCGTCTGTGGTGATATCCATGGCCAGTTTCATGATCTAATGAAG 418
|| |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 393 GTAAACAGTCCAGTCACCGTATGTGGTGATATCCATGGCCAGTTTCATGATCTTATGAAG 452
Query 419 CTTTTCCAGACCGGAGGTCATGTTCCCGAGACAAATTACATATTTATGGGGGATTTCGTT 478
||||| ||||||||||||||||||||||| || |||||||| ||||||||||| |||||
Sbjct 453 CTTTTTCAGACCGGAGGTCATGTTCCCGACACCAATTACATTTTTATGGGGGACTTCGTG 512
Query 479 GATAGAGGTTACAACAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAAGCAAGACAT 538
||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| ||| ||
Sbjct 513 GATAGAGGTTACAACAGCCTTGAAGTCTTCACTATTCTTTTACTTCTTAAAGCTAGATAT 572
Query 539 CCAGCCAATATCACACTTTTGCGTGGAAATCATGAAAGTAGACAGCTAACTCAGGTGTAT 598
||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 573 CCAGCCAATATTACACTTTTGCGCGGAAATCATGAAAGTAGGCAGCTAACGCAGGTGTAT 632
Query 599 GGTTTCTATGACGAATGCCAAAGGAAGTATGGTAATGCTAATGCATGGAGATATTGCACG 658
|||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||
Sbjct 633 GGTTTCTATGACGAATGCCAGAGGAAGTATGGTAACGCTAATGCGTGGCGATATTGCACA 692
Query 659 GATGTTTTTGACTATCTCACACTTTCAGCTATTATAGATGGAACTGTTCTATGTGTTCAT 718
||||||||||||||||| || || ||||||||||||||||| || ||||||||||||||
Sbjct 693 GATGTTTTTGACTATCTTACCCTGTCAGCTATTATAGATGGCACAGTTCTATGTGTTCAC 752
Query 719 GGTGGCCTTTCACCTGATGTACGGACAATTGACCAGATAAGATTGATTGAGCGGAATTGC 778
||||||||||| || ||||| ||||||||||| ||||||||| |||| ||||| ||||||
Sbjct 753 GGTGGCCTTTCCCCGGATGTCCGGACAATTGATCAGATAAGACTGATCGAGCGAAATTGC 812
Query 779 GAAATACCGCATGAAGGACCCTTCTGTGATCTTATGTGGAGTGATCCTGAAGATATTGAA 838
||||| || |||||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct 813 GAAATTCCTCATGAAGGGCCCTTTTGCGATCTTATGTGGAGTGATCCTGAAGATATTGAA 872
Query 839 ACATGGGCTGTCAGTCCACGTGGAGCTGGTTGGCTTTTTGGGTCCAGGGTTACCACTGAG 898
|||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 873 ACATGGGCGGTTAGTCCACGTGGAGCTGGTTGGCTTTTCGGATCCAGGGTTACCACTGAG 932
Query 899 TTTAACCATATTAACAATCTTGATCTAGTATGTCGTGCTCACCAGCTTGTACAAGAAGGT 958
||||||||||| ||||| || ||||||||||| || || ||||| |||||||||||||||
Sbjct 933 TTTAACCATATCAACAAGCTGGATCTAGTATGCCGCGCGCACCAACTTGTACAAGAAGGT 992
Query 959 CTCAAGTACATGTTCCAAGATAAAGGTCTTGTAACTGTGTGGTCTGCACCTAATTACTGC 1018
|| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 993 CTTAAGTACATGTTCCAAGATAAAGGCCTTGTAACTGTATGGTCTGCACCTAATTACTGT 1052
Query 1019 TACCGCTGTGGGAATGTGGCTTCTATATTGAGTTTCAATGACAACATGGAAAGGGAAGTG 1078
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1053 TACCGCTGTGGGAATGTCGCTTCTATATTGAGTTTCAATGACAACATGGAAAGGGAAGTG 1112
Query 1079 AAATTCTTCACGGAGACAGAAGAGAACAATCAAATGAGAGGGCCAAGAACAGGTGTTCCT 1138
|| |||||||| ||||||||||||||||||||||||||||||||||| || || |||||
Sbjct 1113 AAGTTCTTCACAGAGACAGAAGAGAACAATCAAATGAGAGGGCCAAGGACTGGAGTTCCG 1172
Query 1139 TATTTCCTGTGA 1150
|||||||| |||
Sbjct 1173 TATTTCCTATGA 1184
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71385174990
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5