BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474167
Length=3242
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / heli... 5138 0.0
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / heli... 1814 0.0
> AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672163-18677556 FORWARD LENGTH=3326
Length=3326
Score = 5138 bits (2782), Expect = 0.0
Identities = 3113/3269 (95%), Gaps = 37/3269 (1%)
Strand=Plus/Plus
Query 1 AtttttttCTCCGATCAAAACGCCGCCGTAGCGTCTCTGATTCTTTCTTTGGGT---C-- 55
|||||| |||||||||||||||||||||| ||||||||||||||| |||||||| |
Sbjct 1 ATTTTTCTCTCCGATCAAAACGCCGCCGTTGCGTCTCTGATTCTTCCTTTGGGTCAACTG 60
Query 56 -------AA--C-T--TATGAAGAACAACAATTGGCTTCACACTCTCTCTTTTCTCAATT 103
|| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGGAAAAAACCCTTCCTATGAAGAACAACAATTGGCTTCACACTCTCTCTTTTCTCAATT 120
Query 104 TTGCTTCTTTCTTCTTTCCTGGTACGGCTGATTAGAAACTTGACCGCTTAATTCT-TCAA 162
||||||||| ||||||||| ||||||||||||||||||||||||| ||||| | ||
Sbjct 121 TTGCTTCTTACTTCTTTCC----CCGGCTGATTAGAAACTTGACCGCTTGATTCTCTTAA 176
Query 163 AGGAGTTCTTGCCATGGATTCCGCTATTGATATCAGTTCAGATAGTGATGTCGAGATACA 222
||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 177 AGGAGGTCTTGCGATGGATTCCGCTATTGATATCAGTTCTGATAGTGATGTCGAGATACA 236
Query 223 AGAAACTAGAACCAGGCCTCAACTTCCCCCACGGACAGCTGAAGGGTCTCATAGGAGGGA 282
||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| || ||
Sbjct 237 AGAAACTAGAACCAGGCCTCAACATCCCCCACGGATAGCTGAAGGATCTCATAGAAGAGA 296
Query 283 TCCCTCTACGCTAAGACCGCAATTTTTTAGTGGGAGGTCTTCCGGTGCAAATGGCCACAC 342
|| ||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||
Sbjct 297 TCTCTCTACGCTGAGACCGCACTTTCTTAGTGGGAGTTCTTCCGGTGCAAATGGCCACAC 356
Query 343 GAAAACAGGACTTACAAATCCCG-CTTCACGTAATGGTTTTGAAACCAAGCCACTGCCAC 401
||||||||||||||||||| || | |||||||||||||||||| ||||||||||||| |
Sbjct 357 TAAAACAGGACTTACAAATCTCGAC-TCACGTAATGGTTTTGAATCCAAGCCACTGCCTC 415
Query 402 GGGCAGAACACCGTGCACATTTTGCGGGAAATGGGACTATAGGAACTTCCAGAATTCCCA 461
|||||||||||| | ||||| || |||||||||||| ||| | |||||||||||||||||
Sbjct 416 GGGCAGAACACCATACACATATTCCGGGAAATGGGAGTATCGTAACTTCCAGAATTCCCA 475
Query 462 ATATCTCTGTTGGAGATTATGAGAAATTTTCATCTCAACAAGCTCTTAAAAGGACACATT 521
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 476 ATATCTCTGTTGGTGATTATGAGAAATTTTCATCTCAACAAGCTTTTAAAAGGACACATC 535
Query 522 CAACAGCTTTTAGTCGAACTCCTTTTCCTCCCAGACCTGATATTGGCACAAGTAATGGGA 581
|| || | ||||||||| ||||||||||||| |||||||||||||| |||||||| ||||
Sbjct 536 CACCAACCTTTAGTCGACCTCCTTTTCCTCCTAGACCTGATATTGGTACAAGTAACGGGA 595
Query 582 ATGCGAGTCACTTTCGAGGTGGAGCACATGATGAGATAGGCATGGGGCGTATGACTAATG 641
|||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |
Sbjct 596 ATGCGAGTCACTTTCGTGGTGGAGCACATGATGATCTAGGCATGGGGCGTGTGACTAACG 655
Query 642 GCACTCGGATCCTACCTCCATCTGTGGCGCATGGAACATCTGCGTCTCCTTCACATTTTA 701
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 656 GCACTCGGATCCTACCTCCATCTGTGGCGCACGGAACATCTGCGTCTCCTTCACATTTTA 715
Query 702 ATGGTTTAAGTGATCCAATGCATAGGAATGGCATAACCGAAGAAAGGAATTCAGAAAATG 761
|||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 716 ATGGATTAAGTGATCCAATGCATAGGAATGGCATAGGCGAAGAAAGGAATTCGGAAAATG 775
Query 762 ATGAGAGGCTGATCTATCAGGCTGCACTACAGGAACTGAATCAGCCCAAGTCTGAGGTCG 821
| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 776 ACGAGAGGCTGATCTATCAGGCTGCACTACAGGAACTGAATCAACCCAAGTCCGAGGTCG 835
Query 822 ATTTACCTGCCGGTCTTCTTTCTGTTCCCCTTATGAAGCATCAGAAAATTGCATTGGCCT 881
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 836 ATTTACCTGCTGGTCTTCTTTCGGTTCCCCTTATGAAGCATCAGAAAATTGCATTGGCAT 895
Query 882 GGATGTTTCAGAAGGAAACTAATAGTTTGCACTGTATGGGAGGGATATTAGCTGATGATC 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 GGATGTTTCAGAAGGAAACTAATAGTTTGCACTGTATGGGAGGGATATTAGCTGATGATC 955
Query 942 AGGGCCTTGGTAAGACAGTCTCGACTATTGCTCTTATCCTAAAGCAAATGCACGAGGCAA 1001
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 956 AGGGCCTTGGTAAGACAGTCTCGACTATTGCGCTTATCCTAAAGCAAATGCACGAGGCAA 1015
Query 1002 AATTAAAGTCCAAGAATTCAGGCAATCAAGTGGCTGAAGCATTGGATCTGGATGCTGATG 1061
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1016 AATTAAAGTCCAAGAATTCAGGCAATCAAGAGGCTGAAGCATTGGATCTGGATGCTGATG 1075
Query 1062 ATGAGTCAGAAAATGCATTTGAGAAACCAGAGTCTAAGGTTTCAAATGGTAGTGGTGTGA 1121
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1076 ATGAGTCAGAAAATGCATTTGAGAAACCAGAGTCTAAGGCTTCAAATGGTAGTGGTGTGA 1135
Query 1122 ATGGTAG-TTCAGGCATAAAGAAAGCCAAGGGAGAAGAAGCGAGTACTTCAACACGCAAA 1180
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 ATGGT-GATTCAGGCATAAAGAAAGCCAAGGGAGAAGAAGCGAGTACTTCAACACGCAAA 1194
Query 1181 TTCAACAGGAAGCGACCAGCTGCTGGCACTTTAATTGTTTGTCCAGCAAGTGTTGTGCGG 1240
|||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1195 TTCAACAGAAAGAGACCAGCTGCTGGTACTTTAATTGTTTGTCCAGCAAGTGTTGTGCGG 1254
Query 1241 CAGTGGGCAAGAGAACTTGATGAGAAAGTTACTGATGAAGCCAAACTTTCTGTTTTAATA 1300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1255 CAGTGGGCAAGAGAACTTGATGAGAAGGTTACTGATGAAGCCAAACTTTCTGTTTTAATA 1314
Query 1301 TACCACGGTGGTAACAGAACCAAAGATCCTATTGAACTAGCAAAATATGATGTGGTTATG 1360
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 TACCACGGCGGTAACAGGACCAAAGATCCTATTGAACTAGCAAAATATGATGTGGTTATG 1374
Query 1361 ACAACTTACGCTATTGTTTCAAATGAAGTTCCAAAGCAACCCCTGGTGGATGACGATGAG 1420
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1375 ACAACTTACGCCATTGTTTCAAATGAAGTTCCAAAGCAACCCCTGGTTGATGACGATGAG 1434
Query 1421 AATGATGaaaaaaaTTCTGAAAAATACGGTCTCGCTTCTGGCTTCTCCATCAATAAGAAA 1480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1435 AATGATGAAAAAAATTCTGAAAAATATGGTCTCGCTTCTGGCTTCTCCATCAATAAGAAA 1494
Query 1481 CGGAAAAATGTAGTGGGTACTACTAAGAAAAGT---AAGAAAAAAGGTAAGAATAATGCT 1537
||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||
Sbjct 1495 CGGAAAAATGTAGTGGGTACTACTAAGAAGAGTAAGAAGAAAAAAGGTAACAATAATGCT 1554
Query 1538 GACGATTCTTCGTCTGACCCTGACTCTGGTACTCTAGCAAAAGTTGGGTGGTTCAGAGTT 1597
| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGCGA---TTCATCTGACCCTGACTCTGGTACTCTAGCAAAAGTTGGGTGGTTCAGAGTT 1611
Query 1598 GTACTAGATGAAGCTCAAACAATTAAGAATCATAGAACCCAGGTGGCAAGAGCATGTTGC 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 GTACTAGATGAAGCTCAAACAATTAAGAATCATAGAACCCAGGTGGCAAGAGCATGTTGC 1671
Query 1658 GGTCTTCGAGCCAAAAGGAGATGGTGTTTGTCTGGAACACCGATACAAAATACAATAGAT 1717
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1672 GGTCTTCGAGCCAAAAGGAGGTGGTGTTTGTCTGGAACACCAATACAAAATACAATAGAT 1731
Query 1718 GATTTATACAGCTATTTCAGGTTTCTAAAATATGATCCATACGCTGTGTACAAGTCATTC 1777
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1732 GATTTATACAGCTATTTCAGGTTTCTAAAATATGATCCATATGCTGTGTACAAGTCATTC 1791
Query 1778 TGCCACCAAATTAAGGGTCCAATTTCCAGAAATTCCCTTCATGGTTACAAGAAGCTTCAA 1837
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1792 TGCCACCAAATTAAGGGTCCAATTTCCAGAAATTCCCTTCAAGGGTACAAGAAGCTTCAG 1851
Query 1838 GCTGTTCTAAGGGCTATAATGCTGCGCCGTACGAAAGGAACATTGCTTGATGGCCAGCCT 1897
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1852 GCTGTTCTAAGGGCTATAATGCTACGCCGTACGAAAGGAACATTGCTTGATGGCCAGCCT 1911
Query 1898 ATAATTAATCTACCACCAAAGACAATTAATTTGAGCAACGTGGACTTTTCGGTAGAGGAG 1957
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1912 ATAATTAATCTACCACCAAAGACAATTAATTTGAGCCAGGTGGACTTTTCGGTAGAGGAG 1971
Query 1958 CGGTCTTTCTACATGAAGCTTGAATCTGATTCACGTTCTCAGTTCAAGGCATATGCTGCT 2017
|||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1972 CGGTCTTTCTACGTGAAGCTTGAATCCGATTCCCGTTCTCAGTTCAAGGCATATGCTGCT 2031
Query 2018 GCAGGAACTTTGAATCAAAACTATGCAAACATTCTTCTCATGCTCTTGCGACTACGCCAA 2077
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2032 GCAGGAACTTTGAATCAAAACTATGCAAACATTCTTCTCATGCTTTTGCGACTACGCCAA 2091
Query 2078 GCTTGTGACCACCCCCAACTTGTTAAAAGATATAACTCAGATTCTGTTGGAAAAGTATCA 2137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2092 GCTTGTGACCACCCCCAACTTGTTAAAAGATATAACTCAGATTCTGTTGGAAAAGTATCA 2151
Query 2138 GAAGAAGCTGTTAAAAGGCTCCCTAAAGAGGCTCGATTTAGCCTGCTCAGTCGCTTAGAA 2197
|||||||||||||||| ||||||||||||| || | |||||||||||||||||||||||
Sbjct 2152 GAAGAAGCTGTTAAAAAACTCCCTAAAGAGGATCTAGTTAGCCTGCTCAGTCGCTTAGAA 2211
Query 2198 TCGTCTCCCATCTGTTGTGTCTGCCATGATCCACCAGAAGACTCTGTTGTTACATTGTGT 2257
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 2212 TCGTCTCCCATCTGTTGTGTCTGCCATGATCCACCAGAAGACCCTGTTGTTACTTTGTGT 2271
Query 2258 GGCCATATATTCTGCTATCAGTGTGTATCAGATTATATCACAGGAGATGAGGACACGTGC 2317
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2272 GGCCATATATTCTGCTATCAGTGTGTATCAGATTATATCACAGGGGATGAGGACACGTGC 2331
Query 2318 CCTGCGCCTAGATGCAGAGAACAGCTTGCGCATGATGTTGTTTTCTCTAAATCTACCCTT 2377
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2332 CCTGCGCCTAGATGCAGAGAACAGCTTGCGCATGATGTTGTTTTCTCTAAATCCACGCTT 2391
Query 2378 AGAAGTTGCATTGCTGATGATTTGGGTTGTAGTTCCTCACAGGATAA-AGGGCATGACAA 2436
||||||||| ||||||||||||||||||||||||||||| ||||||| | | ||||| ||
Sbjct 2392 AGAAGTTGCGTTGCTGATGATTTGGGTTGTAGTTCCTCAGAGGATAATA-GTCATGATAA 2450
Query 2437 AGCAGTTTTTCAGAACGGCGAGTTTAGTTCATCAAAGATCAAAGCTGTCTTAGATATTCT 2496
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2451 ATCAGTTTTTCAGAATGGCGAGTTTAGTTCATCAAAGATCAAAGCTGTCTTAGATATTCT 2510
Query 2497 GCAGTCACTTTCTAACCAAGGCAGTCCAAACTCAACACAGAATGGTCAAATGGCTTCTTC 2556
|||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 2511 GCAGTCGCTTTCTAACCAAGGCACTTCAAACTCAACACAGAATGGTCAAATGGCTTCTTC 2570
Query 2557 CTCGCAGCAGCCG--T-atgatgatgatgatgatgatgatgatgTCACCATTGTCGAGAA 2613
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2571 CTCGCAGCAGCCGAATGATGATGATGATGATGATGATGATGATGTCACCATTGTCGAGAA 2630
Query 2614 ACCGAGTCTGCAGTCAACTCCTTCTAACCGAGGACCAATAAAAACGATTATATTTTCCCA 2673
| |||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 2631 AACGAGTCTGAAGTCAACTCCTTCTAATGGAGGACCAATAAAAACGATTATATTTTCTCA 2690
Query 2674 GTGGACTGGTATGCTTGACTTGGTCGAGCTATCTCTAAATGAAAATAGTATAGAATTCAG 2733
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 2691 GTGGACTGGTATGCTTGACTTGGTGGAGCTATCTCTAATTGAAAATAGTATAGAATTCAG 2750
Query 2734 AAGATTAGATGGTACAATGAGTCTAATTGCCAGAGACAGAGCTGTGAAAGAATTCAGCAA 2793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2751 AAGATTAGATGGTACAATGAGTCTAATTGCCAGAGACAGAGCTGTGAAAGAATTCAGCAA 2810
Query 2794 CGATCCAGAGGTAAAAGTGATGATAATGTCTTTAAAAGCTGGAAATCTTGGGCTGAATAT 2853
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2811 CGATCCAGATGTAAAAGTGATGATAATGTCTTTAAAAGCTGGAAATCTTGGGCTGAATAT 2870
Query 2854 GATTGCTGCATGTCATGTCATTCTTCTTGATCTTTGGTGGAATCCAACTACTGAAGATCA 2913
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2871 GATTGCTGCATGTCATGTCATTCTTCTTGATCTATGGTGGAATCCAACTACTGAAGATCA 2930
Query 2914 GGCTATTGATCGAGCACATCGTATTGGACAAACTCGACCAGTTACTGTAACTCGTATTAC 2973
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2931 GGCTATTGATCGAGCACATCGTATTGGACAAACTCGACCTGTTACTGTAACTCGTATTAC 2990
Query 2974 GATAAAAAATACTGTGGAGGATAGAATTTTGGCTCTCCAGGAAGAGAAAAGAAAAATGGT 3033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2991 GATAAAAAATACTGTGGAGGATAGAATTTTGGCTCTCCAGGAAGAGAAAAGAAAAATGGT 3050
Query 3034 TGCGTCTGCCTTTGGTGAAGATCATGGTGGAAGCTCTGCAACTCGATTAACAGTTGATGA 3093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3051 TGCGTCTGCCTTTGGTGAAGATCATGGTGGAAGCTCTGCAACTCGATTAACAGTTGATGA 3110
Query 3094 TCTCAAATATCTATTCATGGTGTAGCTGTTCTTAAATCTTCGGTTGGGGAAGTTTCGCTT 3153
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 3111 TCTCAAATATCTATTCATGGTGTAGCTGTTCTTAAATCTTGGGTTGGCGAAGTTTCGCTT 3170
Query 3154 CTTTCAGAATTTTGATCATGAGCTGCATTTTTGTGTTCTTCAGGTTCACAGATTTGAAAT 3213
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3171 CTTTCAGAATTTTGATCATGAGCTGCATTCTTGTGTTCTTCAGGTTCACAGATTTGAAAT 3230
Query 3214 GAGGAAATATGTAAATAACTTATCTGTTG 3242
|||||||||||||||||||||| ||||||
Sbjct 3231 GAGGAAATATGTAAATAACTTAGCTGTTG 3259
> AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:6971352-6976595 FORWARD LENGTH=3399
Length=3399
Score = 1814 bits (982), Expect = 0.0
Identities = 1695/2036 (83%), Gaps = 62/2036 (3%)
Strand=Plus/Plus
Query 1108 TGGTAGTGGTGTGAATGGTAGTTCAGGCATAAAGAAAGCC-AAGGGA-GAAGAAGCGAGT 1165
||||| || || ||||| ||||||| || |||||||| || || |||||||| | |
Sbjct 1146 TGGTAATGATGAGAATGACAGTTCAGATATGGAGAAAGCCGAA--GATGAAGAAGCTAAT 1203
Query 1166 ACTTCAACAC--GCAAATTCAACAGGAAGCGACCAGCTGCTGGCACTTTAATTGTTTGTC 1223
||||||||| || | ||| | ||||| ||||||||||||| || ||||||||||| |
Sbjct 1204 TCTTCAACACGAGC-ATTTC-AGTGGAAGAGACCAGCTGCTGGTACATTAATTGTTTGCC 1261
Query 1224 CAGCAAGTGTTGTGCGGCAGTGGGCAAGAGAACTTGATGAGAAAGTTACTGATGAAGCCA 1283
|||| |||||||| |||||||||||||||| ||||||||||| ||| |||| ||| |||
Sbjct 1262 CAGCGAGTGTTGTAAGGCAGTGGGCAAGAGAGCTTGATGAGAAGGTTTCTGAAGAATCCA 1321
Query 1284 AACTTTCTGTTTTAATATACCACGGTGGTAACAGAACCAAAGATCCTATTGAACTAGCAA 1343
|||||||||| ||| | ||||| ||| |||| || ||||||||||||| |||| |||||
Sbjct 1322 AACTTTCTGTGTTAGTCTACCATGGTAGTAATAGGACCAAAGATCCTAATGAATTAGCAG 1381
Query 1344 AATATGATGTGGTTATGACAACTTACGCTATTGTTTCAAATGAAGTTCCAAAGC-AACCC 1402
|||| ||||||||| ||||||| |||||||||||| | ||||||| ||| || | || |
Sbjct 1382 AATACGATGTGGTTGTGACAACGTACGCTATTGTTACTAATGAAGCTCCCAA-CAAATTC 1440
Query 1403 CTGGTGGATGACGATGAGAATGATGaaaaaaaTTCTGAAAAATACGGTCTCGCTTCTGGC 1462
|||||||||| |||||||| |||||||||||| |||| | ||| ||||| || ||||||
Sbjct 1441 TTGGTGGATGAGGATGAGAACGATGAAAAAAATACTGACAGATATGGTCTTGCCTCTGGC 1500
Query 1463 TTCTCCATCAATAAGAAACGGAAAAAT-GTAGTGGGTACTACTAAGAAAAGTAAGAA-AA 1520
||||||| ||||||||||||| ||| | || |||||| ||| |||||| ||||| || ||
Sbjct 1501 TTCTCCAACAATAAGAAACGG-AAAGTCGTGGTGGGTGCTAGTAAGAAGAGTAA-AAGAA 1558
Query 1521 AAGGTAAGAATAATG--CTGACGATTCTTCGTCTGACCCTGACTCTGGTACTCTAGCAAA 1578
|||| |||| || | || ||||| |||| ||||| ||||| | |||| |||||| |||
Sbjct 1559 GAGGT-AGAA-AAAGCACTAACGATACTTCTTCTGAGCCTGATTGTGGTCCTCTAGGAAA 1616
Query 1579 AGTTGGGTGGTTCAGAGTTGTACTAGATGAAGCTCAAACAATTAAGAATC-ATAGAACCC 1637
||||||||||||||| | ||||||||||||||||| ||||||||||| | ||||||| |
Sbjct 1617 GGTTGGGTGGTTCAGAATAGTACTAGATGAAGCTCAGACAATTAAGAA-CTATAGAACAC 1675
Query 1638 AGGTGGCAAGAGCATGTTGCGGTCTTCGAGCCAAAAGGAGATGGTGTTTGTCTGGAACAC 1697
| |||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct 1676 AAATGGCAAGATCATGTTGCACTCTTCGAGCCAAAAGGAGGTGGTGCTTGTCTGGAACAC 1735
Query 1698 CGATACAAAATACAATAGATGATTTATACAGCTATTTCAGGTTTCTAAAATATGATCCAT 1757
| ||||||||||| || ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct 1736 CAATACAAAATACGATTGATGATTTATATAGCTATTTCAGGTTTCTTAGATATGATCCAT 1795
Query 1758 ACGCTGTGTACAAGTCATTCTGCCACCA-AATTAAGGGTCCAATTTCCAGAAATTCCCT- 1815
| || |||||||||||||| | || | ||| |||| ||||||||||||||||| | |
Sbjct 1796 ATGCGGTGTACAAGTCATT-TTACAGTACAATCAAGGTTCCAATTTCCAGAAATT-CTTG 1853
Query 1816 TCATGGTTACAAGAAGCTTCAAGCTGTTCTAAGGGCTATAATGCTGCGCCGTACGAAAGG 1875
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1854 TCAAGGTTACAAGAAGCTTCAAGCTGTTCTAAGGGCTATAATGCTGCGCCGCACCAAAGG 1913
Query 1876 AACATTGCTTGATGGCCAGCCTATAATTAATCTACCACCAAAGACAATTAATTTGAGCAA 1935
||||||||||||||| | || |||||||||||||| |||||| | | ||||||||| |
Sbjct 1914 AACATTGCTTGATGGGAAACCCATAATTAATCTACCTCCAAAGGTAGTAAATTTGAGCCA 1973
Query 1936 CGTGGACTTTTCGGTAGAGGAGCGGTCTTTCTACATGAAGCTTGAATCTGATTCACGTTC 1995
|| |||||||| || | ||||| |||||||||| |||||||||| |||||||||||||
Sbjct 1974 GGTAGACTTTTCAGTGGCTGAGCGCTCTTTCTACAAGAAGCTTGAAGCTGATTCACGTTC 2033
Query 1996 TCAGTTCAAGGCATATGCTGCTGCAGGAACTTTGAATCAAAACTATGCAAACATTCTTCT 2055
||||||||||| ||||||| ||| |||||||||| ||||||||| ||||| ||||||||
Sbjct 2034 ACAGTTCAAGGCCTATGCTGATGCGGGAACTTTGAGTCAAAACTACGCAAATATTCTTCT 2093
Query 2056 CATGCTCTTGCGACTACGCCAAGCTTGTGACCACCCCCAACTTGTTAAAAGATATAACTC 2115
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2094 GTTGCTTTTGCGACTACGCCAAGCTTGTGACCACCCACAACTTGTTAAAAGATATAACTC 2153
Query 2116 AGATTCTGTTGGAAAAGTATCAGAAGAAGCTGTTAAAAGGCTCCCTAAAGAGGCTCGATT 2175
|||| ||||||||||||||||||||| ||| |||| ||| ||||||| |||||||||
Sbjct 2154 AGATCCTGTTGGAAAAGTATCAGAAGCAGCAGTTAGAAGACTCCCTAGGGAGGCTCGAAG 2213
Query 2176 TAGCCTGCTCAGTCGCTTAGAATCGTC-TC--CCATCTGTTGTGTCTGCCATGATCCACC 2232
|| ||| ||| ||||||||| || || || ||||||| | || ||| |||| |||||
Sbjct 2214 CAGACTGATCAATCGCTTAGAGTCATCATCTGCCATCTGCTATGAGTGCAATGAGCCACC 2273
Query 2233 AGAAGA-CTCTGTTGTTACATTGTGTGGCCATATATTCTGCTATCAGTGTGTATCAGATT 2291
|||| | | |||||||||| ||||||||||||||||| |||||| | ||||| | ||| |
Sbjct 2274 AGAAAAAC-CTGTTGTTACGTTGTGTGGCCATATATTTTGCTATGAATGTGTTTTAGAAT 2332
Query 2292 ATATCACAGGAGATGAGGACACGTGCCCTGCGCCTAGATGCAGAGAACAGCTTGCGCATG 2351
| || || || |||||| |||||||||||| || ||||||| | |||||||||||| ||
Sbjct 2333 ACATAACTGGGGATGAGAACACGTGCCCTGTACCGAGATGCAAACAACAGCTTGCGCGTG 2392
Query 2352 ATGTTGTTTTCTCTAAATCTACCCTTAGAAGTTGCA-TTGCTGATGATTTGGGTTGTAGT 2410
|||||||||||||| ||||| | ||||||| ||||| || ||||||||| ||| ||||||
Sbjct 2393 ATGTTGTTTTCTCTGAATCTTCTCTTAGAAATTGCACTT-CTGATGATTCGGGCTGTAGT 2451
Query 2411 TCCTCACAGGATAAAGGGCATGACAAAGCAGTTTTTCAGAACGGCGAGTTTAGTTCATCA 2470
||||| || ||||| || | ||| | | | || ||||| || | || ||| ||||||||
Sbjct 2452 TCCTCTCATGATAATGGTCTTGATAGATCGGTATTTCAAAAAAGAGACTTTTGTTCATCA 2511
Query 2471 AAGATCAAAGCTGTCTTAGATATTCTGCAGTCACTTTCT-AACCAAGGCAGTCCAAACTC 2529
|| || ||||||||| | ||||| |||||||| ||||| ||||| | ||||||||||||
Sbjct 2512 AAAATTAAAGCTGTCCTCGATATCCTGCAGTCGCTTTCCCAACCA-GACAGTCCAAACTC 2570
Query 2530 AACACAGAATGGTCAAATGGCTTCTTCCTCGCAGCAGCCGTatgatgatgatgatgatga 2589
| | ||| ||||||||||| | |||||||| | | ||| || ||||||| |||||||
Sbjct 2571 AGCTCAGCATGGTCAAATGCCATCTTCCTCAC-G--GCC--AT-ATGATGACGATGATG- 2623
Query 2590 tgatgatgTCACCATTGTCGAGA-AACCGAGTCTGCAGTCAACTCCTTCTAACC-GAGGA 2647
| | | | | ||||| ||| || | |||| || ||| || | ||| || | ||
Sbjct 2624 T--T-A---C-C-ATTGTAGAGCCAAT-GCGTCTTCACTCATCTTCACCTAGCCAGGGGG 2674
Query 2648 CCAATAAAAACGATTATATTTTCCCAGTGGACTGGTATGCTTGACTTGGTCGAGCTATC- 2706
| | |||| ||||| |||||||| |||||||||||||||||||||||||| ||||| |
Sbjct 2675 C-AGTAAAGACGATAATATTTTCTCAGTGGACTGGTATGCTTGACTTGGTTGAGCTG-CG 2732
Query 2707 TCTAAATGAAAATAGTATAGAATTCAGAAGATTAGATGGTACAATGAGTCTAATTGCCAG 2766
| | ||||| | |||| |||||||||||||||||||| |||||||||||| || ||
Sbjct 2733 TATTCTTGAAAGTGGTATTGAATTCAGAAGATTAGATGGCACAATGAGTCTAGCAGCAAG 2792
Query 2767 AGACAGAGCTGTGAAAGAATTCAGCAACGATCCAGAGGTAAAAGTGATGATAATGTCTTT 2826
|||||| || || ||||||||||| || | ||||| ||||| |||||| | ||||| |
Sbjct 2793 AGACAGGGCGGTTAAAGAATTCAGTAAAAAACCAGATGTAAAGGTGATGCTGATGTCGCT 2852
Query 2827 AAAAGCTGGAAATCTTGGGCTGAATATGATTGCTGCATGTCATGTCATTCTTCTTG-ATC 2885
|||||||||||| ||||||||||||||| | |||||||||||||| ||||| |||| |||
Sbjct 2853 AAAAGCTGGAAACCTTGGGCTGAATATGGTAGCTGCATGTCATGTTATTCT-CTTGGATC 2911
Query 2886 TTTGGTGGAATCCAACTACTGAAGATCAGGCTATTGATCGAGCACATCGTATTGGACAAA 2945
||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct 2912 TTTGGTGGAATCCAACTACCGAAGATCAGGCGATTGATCGTGCACATCGTATTGGACAAA 2971
Query 2946 CTCGACCAGTTACTGTAACTCGTATTACGATAAAAAATACTGTGGAGGATAGAATTTTG- 3004
|||| ||||||||||||||||| || || |||||| | || || |||||||||||||||
Sbjct 2972 CTCGGCCAGTTACTGTAACTCGCATAACTATAAAAGACACCGTTGAGGATAGAATTTTGA 3031
Query 3005 -GCTCTCCAGGAAGAGAAAAGAAAAATGGTTGCGTCTGCCTTTGGTGAAGATCATGGTGG 3063
||| || ||||||||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct 3032 AGCT-TC-AGGAAGAGAAAAGGACAATGGTTGCATCGGCCTTTGGTGAAGAACATGGTGG 3089
Query 3064 AAGCTCTGCAACTCGAT-TAACAGTTGATGATCTCAAATATCTATTCATGGTGTAG 3118
||||||||| || || | ||||||| || |||||||| ||||| || |||||||||
Sbjct 3090 AAGCTCTGCGACACG-TCTAACAGTAGACGATCTCAAGTATCTGTTTATGGTGTAG 3144
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 161286721745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5