BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474180
Length=1699
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50560.1 | Symbols: CYP705A25 | cytochrome P450, family 705,... 2026 0.0
AT1G50520.1 | Symbols: CYP705A27 | cytochrome P450, family 705,... 1844 0.0
AT1G50550.1 | Symbols: CYP705A26P | a cytochrome P450 pseudogen... 1016 0.0
AT1G50570.1 | Symbols: | Calcium-dependent lipid-binding (CaLB... 63.9 5e-09
AT2G42247.1 | Symbols: | other RNA | chr2:17599370-17601825 FO... 60.2 6e-08
AT2G42250.1 | Symbols: CYP712A1 | cytochrome P450, family 712, ... 60.2 6e-08
> AT1G50560.1 | Symbols: CYP705A25 | cytochrome P450, family 705,
subfamily A, polypeptide 25 | chr1:18724207-18726272 FORWARD
LENGTH=1984
Length=1984
Score = 2026 bits (1097), Expect = 0.0
Identities = 1385/1523 (91%), Gaps = 23/1523 (2%)
Strand=Plus/Plus
Query 133 CTGTGGTCTACCTCTGAGCCCACCATCTCTACCGGTCATAGGTCATCTTCACTTTCTCCT 192
||| |||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||
Sbjct 188 CTGCGGTCTACCTCCGAGCCCACCGTCTCTACCGATCATTGGTCATCTTCACTTTCTCCT 247
Query 193 CTCTGTTCCATGTTACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGCCCCCTCCTTAA 252
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 248 CTCTGTTCCATGTTACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCTTCCTTCA 307
Query 253 CCTTCGTGCCTTCAAT-TCCCCAATTGTTCTAGTCTCTTCCGGCTTCATGGCCAACGAAG 311
||| || || |||||| |||| | | ||||||||||| || |||| ||||||||||||||
Sbjct 308 CCTCCGCGCTTTCAATATCCCTA-TAGTTCTAGTCTCGTCGGGCTCCATGGCCAACGAAG 366
Query 312 TCTTGAAGACCCAAGACCTGAACTTTGCTACCCGTCA-A-CGCG-AGGTTCCTATCATGG 368
| |||| || |||||||||||||||||||| |||| | | || | || |||||| ||||
Sbjct 367 TTTTGAGGATCCAAGACCTGAACTTTGCTAGCCGTGATAGCGGGCAGACTCCTATAATGG 426
Query 369 AAAGATCACTACTTTTTGGATCTTTTAGCTTTGTCTCAGCTCCTTATGGAGATTACTGGA 428
||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 427 AAAAATCATTACTTTTTGGATCTTTTGGCTTTGTCTCAGTTCCTTATGGAGATTACTGGA 486
Query 429 GGTTCATGAAGAAGCTCTTAGTCGAAAAGCTTCTCGGGTCTCATTCGCTCGAGCAGACAC 488
| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||
Sbjct 487 GATTCATGAAGAAGCTCTTAGTCAAAAAACTTCTCGGGTCTCATTCCCTCGAGCAGACAC 546
Query 489 GACTAATCCGTGCAAAAGAACTC-AAGACTTTCCGTGCTATGTTGTTCGATAAGGCGGCA 547
| || |||||| ||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct 547 GGCTCCTCCGTGGGAAAGAACTCCAA-ACTTTCCGTGCTATGTTGTTTGATAAGGCGGCA 605
Query 548 GAGAAGGAGACTGTTGATGTGGGTAAAGAGATGATGAAGCTAACGAATAATAGCATTTGC 607
|||| ||||||||||| || |||||||||||||||||||||||||| || |||||||||
Sbjct 606 AAGAATGAGACTGTTGACGTTGGTAAAGAGATGATGAAGCTAACGAACAACAGCATTTGC 665
Query 608 AGGATGATAATGGGGAGGAAG-TGTTCAGAGGAGAACGGTGAAGCAGAACAAGTAAGGGG 666
||||||| ||||||||||| | |||||||||||||||||||||||||| ||||| |||||
Sbjct 666 AGGATGACAATGGGGAGGA-GCTGTTCAGAGGAGAACGGTGAAGCAGAGCAAGTCAGGGG 724
Query 667 TTTGGTGACCAAATCACTTAGTTTGGCGAAGAAGTTCCTTATAGCTAGCATTGTCGGTCG 726
||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct 725 TTTGGTGACCAAATCACTTAGTTTGACGAAGAAGTTCCTCATAGCTAGCATTGTTGGTCA 784
Query 727 ATTTTTCAAGCTGGTCGGGATCTCTCTGTTTGAGAAGGAAATCATGGAGGTCTCGCAGAT 786
||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 785 ATTTTCCAAGCTGGTCGGGATCTCTTTGTTTGGGAAGGAAATCATGGAGGTCTCGCAGAG 844
Query 787 GTATGATGAATTGCTGGAGAAGATTATGAAGGAACACGAAGAAAATCCGGACAA-GAAAG 845
||| ||||||||||||||||| ||||| |||||||||||||||||||| |||| | | |
Sbjct 845 GTACGATGAATTGCTGGAGAAAATTATTAAGGAACACGAAGAAAATCCCAACAATGGA-G 903
Query 846 AGAATATAGACATGATGGATGTTCTGTTAGAAGTTTGTGCAGATGATAACGCCGAATTTC 905
|| ||| |||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct 904 AGGATAGAGACATGATGGATGTTCTATTGGAAGTTTGTGCAGATGACAACGCCGAGTTTA 963
Query 906 AGATTTCCAGGAATCAAATCAAAGCACTTTTTGTGGAGCTTTTCATTGCAGGCACTGATA 965
||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 964 AGATTTCCAGGAACCAAATCAAAGCACTTTTTGTGGAGATTTTCCTTGCAGGCACTGATA 1023
Query 966 CTTCAGCACAAACAACACAGTGGATAATGGCAGAACTCATTAACCATCCTGAGATTCTT- 1024
||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1024 CTTCAGCACAAACAATACAGTGGATATTGGCAGAACTCATTAACCATCCCGAGATTCTTG 1083
Query 1025 AAAAGACTGAGAAAAGAGATAGAATCTGTCGTTGGGGAAACGAGATTTATTCAAGAAACA 1084
||||| |||||||||||||||||||||| ||||||| | |||| | ||||||||||||
Sbjct 1084 AAAAGT-TGAGAAAAGAGATAGAATCTGTTGTTGGGGTTAGGAGACTGATTCAAGAAACA 1142
Query 1085 GATCTCCCCAGTTTGCCGTACTTACAGGCTGTGATGAAAGAAGGGCTAAGACTACACCCG 1144
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1143 GATCTCCCCAACCTGCCGTATTTACAGGCTGTGATGAAAGAAGGGCTAAGACTACACCCG 1202
Query 1145 CATACGCCAATCTTGGCGAGGAATGCAACAGAAGGATGCAAGATCGGAGGGTATTACATA 1204
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 CATACGCCAATCTTGGTGAGGAATGCAACAGAAGGATGCAAGATCGGAGGGTATTACATA 1262
Query 1205 GGGCAGAACACAACAATGATAATAAACGCTTATGCAGTGCTGAGAGATCCGGATTCATGG 1264
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 1263 GGGCAGAACACAACAATGATGGTAAACGCTTATGCGGTGCTGAGAGATCCGGATTCATGG 1322
Query 1265 GAATATCCAGGAGAATTTCAGCCCGAGAGATTCATGACTTCTCCTTCAAAAGGGAAAGAA 1324
|||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 1323 GAATATCCAGAAGAATTTCAGCCCGAGAGGTTCATGACTTCTCCTTTAAAAGGGAAAGAA 1382
Query 1325 GATGAGAGAGCACAGTTAGCTTTGAACTACATTCCTTTCGGGAGTGGAAGAAGAGGATGT 1384
||||||| ||||||| |||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 1383 GATGAGAAAGCACAGCTAGCCTTGAACTTCATTCCTTTCGGGAGTGGAAGAAGAGGATGT 1442
Query 1385 CTCGGAAAAAACTTGGGCTATATCTTCATAGGAGTAGCCATTGGAACAATGGTGCAGTGT 1444
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 1443 CTCGGAAAAAACTTGGGTTATATCTTCATGGGAGTAGCCATTGGAACAATGGTGCAGGGT 1502
Query 1445 TTTGATTGGAAAATCAACGGAGATAAGGTTTACATGGAAGAGACGGGGGAAATGGCGCTG 1504
|||||||||| |||||| |||||||||||| ||||||||||||| || |||||| |||||
Sbjct 1503 TTTGATTGGAGAATCAATGGAGATAAGGTTAACATGGAAGAGACTGGAGAAATGACGCTG 1562
Query 1505 -CGCATGGCTCATCCACTTAAATGCACTCCTGTTACTCGAATTAACCCAGCTAGCTTTGA 1563
| ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||
Sbjct 1563 AC-CATGGCTCATCCACTTAAATGCATTCCTGTTGCTCGAATCAACCCAGCTAGCTTTGA 1621
Query 1564 ATC-TGCAGATCTTTAGTTGATGGAGGAGTTTGATATGTCTTGTTGAAGTTGCAGACATA 1622
|| | || | | | | ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1622 -TCCTT-AG-T-TG-A-T-GATGGAGGAGTATGATATGTCTTGTTGAAGTTGCAGACATA 1674
Query 1623 TGTCTGAAAGTAATAATGGAACT 1645
||||| ||| | |||||||||||
Sbjct 1675 TGTCTCAAACTGATAATGGAACT 1697
Score = 176 bits (95), Expect = 6e-43
Identities = 125/138 (91%), Gaps = 7/138 (5%)
Strand=Plus/Plus
Query 1 GATCTAAAGAGTACATATAATAAAATCAGTCTG---C-T-T--CCCTCTCTGCAGTTTTT 53
||||||||||||||||||||||||| ||||||| | | | |||||||||||||||||
Sbjct 1 GATCTAAAGAGTACATATAATAAAACCAGTCTGCTTCATCTAACCCTCTCTGCAGTTTTT 60
Query 54 GGACAACAATGGCAGCAATCACCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTAG 113
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGACAACAATGGCAGCAATCAGCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTAG 120
Query 114 GGCTCTTCTCACTCTTCT 131
|||||||||||||||
Sbjct 121 CAATCTTCTCACTCTTCT 138
Score = 71.3 bits (38), Expect = 3e-11
Identities = 42/44 (95%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 1656 AAGAGATTGCGAAACTTTAGTACTAAATTGGAAAAGTTGCAGAT 1699
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1941 AAGAGATTATGAAACTTTAGTACTAAATTGGAAAAGTTGCAGAT 1984
> AT1G50520.1 | Symbols: CYP705A27 | cytochrome P450, family 705,
subfamily A, polypeptide 27 | chr1:18719378-18721219 FORWARD
LENGTH=1754
Length=1754
Score = 1844 bits (998), Expect = 0.0
Identities = 1368/1544 (89%), Gaps = 36/1544 (2%)
Strand=Plus/Plus
Query 133 CTGTGGTCTACCTCTGAGCCCACCATCTCTACCGGTCATAGGTCATCTTCACTTTCTCCT 192
|||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 123 CTGTGGTCTACCTCCGAGCCCACCCTCTCTACCGGTCATAGGTCATCTTCACCTTCTCCT 182
Query 193 CTCTGTTCCATGT-TACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGCCCCCTCCTTA 251
||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 183 CTCTGTTCCATGTCT-CAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTC 241
Query 252 ACCTTCGTGCCTTCAAT-TCCCCAATTGTTCTAGTCTCTTCCGGCTTCATGGCCAACGAA 310
|||||||||| |||||| | |||||| ||| ||||||||||||||| |||||||||||||
Sbjct 242 ACCTTCGTGCATTCAATAT-CCCAATAGTTATAGTCTCTTCCGGCTCCATGGCCAACGAA 300
Query 311 GTCTTGAAGACCCAAGACCTGAACTTTGCTACCCGTCAACGCGAGGTTCCTATCATGGAA 370
|| |||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 301 GTTTTGAGGACCCAAGACCTGAACTTTGCTACCCGTCAACGTGAGGTTTCTATAATGGAA 360
Query 371 AGATCACTACTTTTTGGATCTTTTAGCTTTGTCTCAGCTCCTTATGGAGATTACTGGAGG 430
| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 361 AAATCATTACTTTTTGGATCTTTTGGCTTTGTCTCAGCTCCTTATGGAGATTACTGGAGA 420
Query 431 TTCATGAAGAAGCTCTTAGTCGA-AAAGCTTCTCGGGTCTCATTCGCTCGAGCAGACACG 489
||||||||||||||||||||| | ||| ||| ||||||||||||| ||||||||||||||
Sbjct 421 TTCATGAAGAAGCTCTTAGTC-ACAAACCTTTTCGGGTCTCATTCCCTCGAGCAGACACG 479
Query 490 ACTAATCCGTGCA-AAAGAACTCAAGACTTTCCGTGCTATGTTGTTCGATAAGGCGGCAG 548
|| || |||| | ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 480 GCTCATTCGTG-AGAAAGAACTCAAGACTTTCCGTACTATGTTGTTCGATAAGGCGGCAA 538
Query 549 AGAAGGAGACTGTTGATGTGGGTAAAGAGATGATGAAGCTAACGAATAATAGCATTTGCA 608
|||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 539 AGAAGGGGACAGTTGATGTTGGTAAAGAGATGATGAAGCTAACGAATAACAGCATTTGCA 598
Query 609 GGATGATAATGGGGAGGAAGTGTTCAGAGGAGAACGGTGAAGCAGA-ACAAGTAAG-GGG 666
|||||||||||||||||| |||||||||||||||| |||||||||| | |||| | |
Sbjct 599 GGATGATAATGGGGAGGAGGTGTTCAGAGGAGAACAGTGAAGCAGAGA-AAGT-CGAAGA 656
Query 667 TTTGGTGACCAAATCACTTAGTTTGGCGAAGAAGTTCCTTATAGCTAGCATTGTCGGTCG 726
||||||| ||||||| ||||||||| ||||||| |||||||||||| || || |||||
Sbjct 657 CTTGGTGATCAAATCATTTAGTTTGGTGAAGAAGGTCCTTATAGCTAACACGGTTGGTCG 716
Query 727 ATTTTTCAAGCTGGTCGGGATCTCTCTGTTTGAGAAGGAAATCATGGAGGTCTCGCAGAT 786
| || ||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 ACTTCTCAAGAAGTTTGGGATCTCTCTGTTTGAGAAGGAAATCATGGAGGTCTCGCAGAG 776
Query 787 GTATGATGAATTGCTGGAGAAGATTATGAAGGAACACGAAGAAAATCCGGACAAGAAAGA 846
||| |||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||
Sbjct 777 GTACGATGAATTGCTGGAAAAAATTATTAAAGAACACGAAGAGGATCCGAACAAGAAAGA 836
Query 847 GAATATAGACATGATGGATGTTCTGTTAGAAGTTTGTGCAGATGATAACGCCGAATTTCA 906
| ||| ||||||||||||||||||||| |||||||||||||| || || || || || |
Sbjct 837 GGATAGAGACATGATGGATGTTCTGTTGGAAGTTTGTGCAGACGACAAGGCTGAGGTTAA 896
Query 907 GATTTCCAGGAATCAAATCAAAGCACTTTTTGTGGAGCTTTTCATTGCAGGCACTGATAC 966
|||| ||||||| ||||||||||| ||| |||||||||||||| ||| ||||||||||||
Sbjct 897 GATTACCAGGAACCAAATCAAAGCGCTTATTGTGGAGCTTTTCCTTGGAGGCACTGATAC 956
Query 967 TTCAGCACAAACAACACAGTGGATAATGGCAGAACTCATTAACCATCCTGAGATTCTTAA 1026
|||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 957 TTCAGCACAAACAATACAGTGGATAATGGCCGAACTCATTAACCATCCCGAGATTCTTAA 1016
Query 1027 AAGACTGAGAAAAGAGATAGAATCTGTCGTTGGGGA-AACGAGATTTATTCAAGAAACAG 1085
|| | | ||| |||||||||||||||| || || | |||||| ||||||||||||||||
Sbjct 1017 AATATTAAGAGAAGAGATAGAATCTGTTGTCGGA-ACAACGAGGTTTATTCAAGAAACAG 1075
Query 1086 ATCTCCCCAGTTTGCCGTACTTACAGGCTGTGATGAAAGAAGGGCTAAGACTACACCCGC 1145
||||| | | ||||||| || |||||||||||||||||||| | |||||||||||| |
Sbjct 1076 ATCTCTCAAACCTGCCGTATTTGCAGGCTGTGATGAAAGAAGGACAAAGACTACACCCAC 1135
Query 1146 ATACGCCAATCTTGGCGAGGAATGCAAC-AGAAGGATGCAAGATCGGAGGGTATTACATA 1204
|| ||||||| |||| |||||||||||| | ||||||||||||| |||||||| ||||||
Sbjct 1136 ATTCGCCAATGTTGGTGAGGAATGCAACCA-AAGGATGCAAGATTGGAGGGTACTACATA 1194
Query 1205 GGGCAGAACACAACAATGATAATAAACGCTTATGC-AGTGCTGAGAGATCCGGATTCATG 1263
|||||||||||| ||| |||||||| | ||||| | || ||| |||||| ||||||||
Sbjct 1195 CCGCAGAACACAACGATGCTAATAAACACCTATGCGA-TGATGATAGATCCAGATTCATG 1253
Query 1264 GGAATATCCAGGAGAA-TTTCAGCCCGAGAGATTCATGACT-TCTCCTTCAAAAGGGAAA 1321
|||| |||||| | || |||||||||||||| |||||| | ||||||||||||||||||
Sbjct 1254 GGAAAATCCAG-ACAAGTTTCAGCCCGAGAGGTTCATGG-TGTCTCCTTCAAAAGGGAAA 1311
Query 1322 GAAGATGAGAGAGCACAGTTAGCTTTGAACTACATTCCTTTCGGGAGTGGAAGAAGAGGA 1381
|| |||||||||| |||| |||||||||||| ||||||||||||||| |||||||||| |
Sbjct 1312 GACGATGAGAGAGAACAGCTAGCTTTGAACTTCATTCCTTTCGGGAGCGGAAGAAGAGCA 1371
Query 1382 TGTCTC-GGA-AAAAACTTGGGCTATATCTTCA-TAGGAGTAGCCATTGGAACAATGGTG 1438
|||| | ||| ||||| ||||||||| |||||| | |||||||||||||||||||||||
Sbjct 1372 TGTC-CAGGAGAAAAA-TTGGGCTATCTCTTCACT-GGAGTAGCCATTGGAACAATGGTA 1428
Query 1439 CAGTGTTTTGATTGGAAAATCAACGGAGATAAGGTTTACATGGAAGAGACGGGGGAAATG 1498
||||||||||| |||| |||| | |||||||||||| || |||||||| | || ||||||
Sbjct 1429 CAGTGTTTTGACTGGATAATCGATGGAGATAAGGTTAACGTGGAAGAGGCTGGAGAAATG 1488
Query 1499 GCGCTG-CGCATGGCTCATCCACTTAAATGCACTCCTGTTACTCGAATTAACCCA---GC 1554
||||| | |||||||||||||||||||||||||||||| |||||| |||||||| ||
Sbjct 1489 ACGCTGAC-CATGGCTCATCCACTTAAATGCACTCCTGTGACTCGAGTTAACCCATTAGC 1547
Query 1555 TAGCTTTGAATCTGCAGATCTTTAGT--T-GATGGAGGAGTTTGATATGTCTTGTTGAAG 1611
|||||||||||||| ||||| | ||| | |||||||||||||||||||| |||||||||
Sbjct 1548 TAGCTTTGAATCTGAAGATCCTAAGTGGTTGATGGAGGAGTTTGATATGTATTGTTGAAG 1607
Query 1612 TTGCAGACATATGTCTGAAAGTAATAATGGAACTTGCTGTCTTT 1655
|||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1608 TTGCAGACATATGTCTGAAACTAATAATGGAACATGCTGTCTTT 1651
Score = 124 bits (67), Expect = 2e-27
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 59 ACAATGGCAGCAATCACCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTAGGGCTC 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1 ACAATGGCAGCAATCACCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTAGGAATC 60
Query 119 TTCTCACTCTTCT 131
|||||||||||||
Sbjct 61 TTCTCACTCTTCT 73
> AT1G50550.1 | Symbols: CYP705A26P | a cytochrome P450 pseudogene
| chr1:18721898-18722866 FORWARD LENGTH=969
Length=969
Score = 1016 bits (550), Expect = 0.0
Identities = 732/819 (89%), Gaps = 15/819 (2%)
Strand=Plus/Plus
Query 132 ACTGTGGTCTACCTCTGAGCCCACCATCTCTACCGGTCATAGGTCATCTTCACTTTCTCC 191
||||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 119 ACTGTGGTCTACCACCGAGCCCACCATCTATACCGGTCATAGGTCATCTTCACCTTCTCC 178
Query 192 TCTCTGTTCCATGTTACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGCCCCCTCCTTA 251
|||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 179 TCTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTC 238
Query 252 ACCTTCGTGCCTTCAAT-TCCCCAATTGTTCTAGTCTCTTCCGGCTTCATGGCCAACGAA 310
|||| || || |||||| |||| ||| |||||||||| || |||| |||||||||||||
Sbjct 239 ACCTCCGCGCTTTCAATATCCC-AATAGTTCTAGTCTAGTCGGGCTCCATGGCCAACGAA 297
Query 311 GTCTTGAAGACCCAAGACCTGAACTTTGCTACCCGTCA-A-CGCG-AGGTTCCTATCATG 367
|| |||| || |||||||||||||||||||| |||| | | || | || |||||| |||
Sbjct 298 GTTTTGAGGATCCAAGACCTGAACTTTGCTAGCCGTGATAGCGGGCAGACTCCTATAATG 357
Query 368 GAAAGATCACTACTTTTTGGATCTTTTAGCTTTGTCTCAGCTCCTTATGGAGATTACTGG 427
|||| |||| ||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 358 GAAAAATCATTACTTTTTGGATCTTTTGGCTTTGTCTCAGTTCCTTATGGAGATTACTGG 417
Query 428 AGGTTCATGAAGAAGCTCTTAGTCGAAAAGCTTCTCGGGTCTCATTCGCTCGAGCAGACA 487
|| ||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct 418 AGATTCATGAAGAAGCTCTTAGTCAAAAAACTTCTCGGGTCTCATTCCCTCGAGCAGACA 477
Query 488 CGACTAATCCGTGCAAAAGAACTC-AAGACTTTCCGTGCTATGTTGTTCGATAAGGCGGC 546
|| || |||||| ||||||||| || |||||||||||||||||||| ||||||||| |
Sbjct 478 CGGCTCCTCCGTGGGAAAGAACTCCAA-ACTTTCCGTGCTATGTTGTTTGATAAGGCGAC 536
Query 547 AGAGAAGGAGACTGTTGATGTGGGTAAAGAGATGATGAAGCTAACGAATAATAGCATTTG 606
| |||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||
Sbjct 537 AAAGAATGAGACTGTTGACGTTGGTAAAGAGATGATGAAGCTAACGAATAACAGCATTTG 596
Query 607 CAGGATGATAATGGGGAGGAAG-TGTTCAGAGGAGAACGGTGAAGCAGAACAAGTAAGGG 665
|||||||| ||||||||||| | |||||||||||||||| ||||||||| ||||| ||||
Sbjct 597 CAGGATGACAATGGGGAGGA-GCTGTTCAGAGGAGAACGATGAAGCAGAGCAAGTCAGGG 655
Query 666 GTTTGGTGACCAAATCACTTAGTTTGGCGAAGAAGTTCCTTATAGCTAGCATTGTCGGTC 725
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct 656 GTTTGGTGACCAAATCACTTAGTTTGACGAAGAAGTTCCTCATAGCTAGCATTGTTGGTC 715
Query 726 GATTTTTC-AAGCTGGTCGGGATCTCTCTGTTTGAGAAGGAAATCATGGAGGTCTCGCAG 784
| ||||| |||||||||||||||||||| |||| ||||||||||| |||| |||||||
Sbjct 716 -ACTTTTCCAAGCTGGTCGGGATCTCTCTTTTTGGGAAGGAAATCAAGGAGCACTCGCAG 774
Query 785 ATGTATGATGAATTGCTGGAGAAGATTATGAAGGAACACGAAGAAA-ATCCGGACAA-GA 842
| || |||||||||||||||||||||||| |||||||||||| || ||||| |||| |
Sbjct 775 AGGTTTGATGAATTGCTGGAGAAGATTATTAAGGAACACGAA-AAGGATCCGAACAATGG 833
Query 843 AAGAGAATATAGACATGATGGATGTTCTGTTAGAAGTTTGTGCAGATGATAACGCCGAAT 902
| ||| ||| |||||||||||||||||| | ||||||||||||||||| |||||||| |
Sbjct 834 A-GAGGATAGAGACATGATGGATGTTCTACTGGAAGTTTGTGCAGATGACAACGCCGAGT 892
Query 903 TTCAGATTTCCAGGAATCAAATCAAAGCACTTTTTGTGG 941
|| ||||||||||||| ||||||||||||||||||||||
Sbjct 893 TTAAGATTTCCAGGAACCAAATCAAAGCACTTTTTGTGG 931
Score = 108 bits (58), Expect = 2e-22
Identities = 66/70 (94%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 62 ATGGCAGCAATCACCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTAGGGCTCTTC 121
||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct 1 ATGGCAGCAATCACCATTTACTTTCAGCTCTGCTTCATCTTCATCCTCCTAGGTATCTTC 60
Query 122 TCACTCTTCT 131
||||||||||
Sbjct 61 TCACTCTTCT 70
> AT1G50570.1 | Symbols: | Calcium-dependent lipid-binding (CaLB
domain) family protein | chr1:18726235-18728289 REVERSE LENGTH=1521
Length=1521
Score = 63.9 bits (34), Expect = 5e-09
Identities = 34/34 (100%), Gaps = 0/34 (0%)
Strand=Plus/Minus
Query 1666 GAAACTTTAGTACTAAATTGGAAAAGTTGCAGAT 1699
||||||||||||||||||||||||||||||||||
Sbjct 1517 GAAACTTTAGTACTAAATTGGAAAAGTTGCAGAT 1484
> AT2G42247.1 | Symbols: | other RNA | chr2:17599370-17601825
FORWARD LENGTH=1558
Length=1558
Score = 60.2 bits (32), Expect = 6e-08
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Minus
Query 413 TATGGAGATTACTGGAGGTTCATGAAGAAGCT 444
||||||||||||||||||||||||||||||||
Sbjct 1058 TATGGAGATTACTGGAGGTTCATGAAGAAGCT 1027
> AT2G42250.1 | Symbols: CYP712A1 | cytochrome P450, family 712,
subfamily A, polypeptide 1 | chr2:17600075-17601849 REVERSE
LENGTH=1685
Length=1685
Score = 60.2 bits (32), Expect = 6e-08
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 413 TATGGAGATTACTGGAGGTTCATGAAGAAGCT 444
||||||||||||||||||||||||||||||||
Sbjct 525 TATGGAGATTACTGGAGGTTCATGAAGAAGCT 556
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83985511785
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5