BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474186
Length=1293
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50580.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1020 0.0
AT3G29630.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 750 0.0
> AT1G50580.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr1:18730831-18732177 FORWARD LENGTH=1347
Length=1347
Score = 1020 bits (552), Expect = 0.0
Identities = 636/678 (94%), Gaps = 0/678 (0%)
Strand=Plus/Plus
Query 616 GGTCCAATGCTCCCTGAACCTCAAAATAAGAGTGGTAAACCTCTGGAAGACCGATGGAAT 675
|||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||
Sbjct 670 GGTCCAATGCTCCCTGAACCGCAAAATAAGAGTGGTAAATTTCTAGAAGACCGATGGAAT 729
Query 676 CACTGGTTAAACGTATTCGAACCAGGCTCGGTAGTGTTTTGTGCGTTTGGAACTCAATTC 735
||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct 730 CACTGGTTAAACGGATTTGAACCAGGGTCGGTAGTGTTTTGTGCGTTTGGCACTCAATTC 789
Query 736 TTTTTCGAGAAGGATCAATTCCAAGAATTCTGTTTAGGAATGGAGCTAACGGGTCTACCG 795
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 790 TTTTTCGAGAAGGATCAATTTCAAGAATTCTGTTTAGGAATGGAGCTAATGGGTCTACCG 849
Query 796 TTTTTAATAGCGGTTATGCCGCCAAAAGGCTCATCAACGGTTCAAGAAGCGTTACCAGAA 855
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 850 TTTTTAATATCGGTTATGCCGCCAAAAGGCTCACCAACGGTTCAAGAAGCGTTACCAAAA 909
Query 856 GGATTTGAAGAACGGGTTAAAGGGCGTGGAATCGTTTGGGAAGGATGGGTGGAACAACCT 915
||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct 910 GGATTCGAAGAACGGGTTAAAAAGCATGGAATCGTTTGGGAAGGATGGTTGGAACAACCT 969
Query 916 TTGATATTGTCTCATCCATCAGTAGGTTGCTTTGTGAACCACTGTGGGTTCGGTTCAATG 975
||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct 970 TTGATATTGTCTCATCCATCAGTAGGTTGCTTTGTGAACCATTGTGGCTTTGGTTCAATG 1029
Query 976 TGGGAGTCTTTGGTTAGTGATTGCCAGATTGTGTTTATCCCACAATTGGCTGATCAAGTT 1035
||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 1030 TGGGAGTCTTTGGTTAGTGATTGTCAGATTGTGTTTATTCCACAATTGGCAGATCAAGTT 1089
Query 1036 CTCATCACAAGATTGTTGACTGAAGAACTCCAAGTCTCAGTGAAGGTGCAGAGAGAAGAT 1095
|||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||
Sbjct 1090 CTCATCACAAGATTGTTGACTGAAGAACTCGAAGTCTCTGTGAAAGTGCAGAGAGAAGAT 1149
Query 1096 TCCGGATGGTTCTCGAAGGAGAACTTGCGAGATACGGTTAAATCTGTGATGGATAGAGAT 1155
||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||| ||||
Sbjct 1150 TCCGGATGGTTCTCGAAAGAGGACTTGAGAGATACTGTTAAATCTGTGATGGATATAGAT 1209
Query 1156 AGTGAGATTGGAAATTTAGTGAAGAAGAATCATAAGAAATTGAAAGATACTTTGGTTAGT 1215
||||||||||| || |||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1210 AGTGAGATTGGGAACTTAGTGAAGAGGAATCATAAGAAATTGAAAGAGACTTTAGTTAGT 1269
Query 1216 CCTGGATTGTTGAGTGGTTGTGCTGATAAGTTTGTAGAAGCATTGGAGAATGAAGTCAAC 1275
||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1270 CCTGGATTGTTAAGTGGTTATGCTGATAAGTTTGTAGAAGCATTGGAGATTGAAGTCAAC 1329
Query 1276 AACACAAAATCTTCTTGA 1293
||||| |||| |||||||
Sbjct 1330 AACACCAAATTTTCTTGA 1347
Score = 998 bits (540), Expect = 0.0
Identities = 592/618 (96%), Gaps = 0/618 (0%)
Strand=Plus/Plus
Query 1 ATGGGGTCAAAATTTCATGCTTTTATGTACCCATGGTTTGGTTTTGGTCATATGATTCCA 60
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1 ATGGGATCAAAATTTCATGCTTTTATGTATCCATGGTTTGGTTTTGGTCATATGATTCCA 60
Query 61 TATCTTCATCTAGCCAACAAACTAGCTGAGAAAGGTCATACCATCACTTTCTTCCTTCCC 120
||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 61 TATCTTCATTTAGCCAACAAACTAGCTGAGAAAGGTCATAGGGTCACTTTCTTCCTCCCC 120
Query 121 AAGAAAGCTCATAAGCAGCTCCAACCTCTCAATCTGTTCCCAGACAGTATTGTCTTGGAG 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 121 AAGAAAGCTCATAAGCAGCTCCAACCTCTCAATCTGTTCCCAGACAGCATTGTCTTTGAG 180
Query 181 CCTCTTTCTCTCCCTCCTGCCGACGGTCTCCCTTTTGGCGCCGAGACAGCCTCGGATCTC 240
|||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 181 CCTCTTACTCTCCCTCCTGTCGATGGTCTCCCTTTTGGCGCCGAGACAGCCTCGGATCTC 240
Query 241 CCAAACTCAACTAAGAAACCCATTTTCCTTGCCATGGATCTCCTACGCGATCAGATCGAA 300
||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||
Sbjct 241 CCAAACTCAACTAAGAAACCCATATTCGTTGCCATGGATCTCTTACGCGATCAGATCGAA 300
Query 301 GCTAAGGTCCTTGCTTTGAAACCAGATCTAATCTTTTTCGATTTTGTTCATTGGGTTCCA 360
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCAAAGGTCCGTGCTTTGAAACCAGATCTAATCTTTTTCGATTTTGTTCATTGGGTTCCA 360
Query 361 GAAATGGCAAAAGAGTTTGGAATAAAGAGTGTCAATTACCAGATCATATCGGCAGCTTGT 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GAAATGGCAGAAGAGTTTGGAATAAAGAGTGTCAATTACCAGATCATATCGGCAGCTTGT 420
Query 421 GTAGCTATGGTTCTTGCACCTAGTGCTGAATTAGGGTTTCCTCCGCCGGATTATCCTTTA 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 GTAGCTATGGTTCTTGCACCTAGGGCTGAATTAGGGTTTCCTCCGCCGGATTATCCTTTA 480
Query 481 TCCAAAGTGGCGTTAAGTGGACATGACGCTAACGTCTGTTCTCTCTTTGCAAATTCACAT 540
||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct 481 TCCAAAGTGGCGTTACGTGGACATGAAGCTAACGTCTGTTCTCTCTTTGCGAATTCCCAT 540
Query 541 GAGCTTTTTGGTCTGATTACCAAAGGCCTTAAGAACTGTGACGTCGTTTCCATAAGGACT 600
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GAGCTTTTCGGTCTGATCACCAAAGGCCTTAAGAACTGTGACGTCGTTTCCATAAGGACC 600
Query 601 TGCGTGGAACTTGAAGGT 618
||||||||||||||||||
Sbjct 601 TGCGTGGAACTTGAAGGT 618
> AT3G29630.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr3:11447028-11448609 REVERSE LENGTH=1582
Length=1582
Score = 750 bits (406), Expect = 0.0
Identities = 574/656 (88%), Gaps = 7/656 (1%)
Strand=Plus/Plus
Query 616 GGTCCAATGCTCCCTGAACCTCAAAATAAGAGTGGTAAACCTCTGGAAGACCGATGGAAT 675
||||||||| ||| ||| || ||| ||||||||||| || || ||||| |||||||||
Sbjct 758 GGTCCAATGTTCCTTGATCCACAAGGGAAGAGTGGTAAGCCGCTAGAAGATCGATGGAAT 817
Query 676 CACTGGTTAAACGTATTCGAACCAGGCTCGGTAGTGTTTTGTGCGTTTGGAACTCAATTC 735
| |||||||||| ||| |||||| |||||||||||| ||||||||||| || || |||
Sbjct 818 AATTGGTTAAACGGATTTGAACCAAGCTCGGTAGTGTACTGTGCGTTTGGCACCCATTTC 877
Query 736 TTTTTCGAGA-AGGATCAATTCCAAGAATTCTGTTTAGGAATGGAGCTAACGGGTCTACC 794
|||||||||| | |||||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct 878 TTTTTCGAGATA-GATCAATTTCAAGAACTCTGTTTAGGAATGGAGCTCACGGGTCTACC 936
Query 795 GTTTTTAATAGCGGTTATGCCGCCAAAAGGCTCATCAACGGTTCAAGAAGCGTTACCAGA 854
||||| ||||||||||||| || | ||| || |||||| |||||||||| ||||||||
Sbjct 937 TTTTTTGGTAGCGGTTATGCCACCGAGAGGGTCTTCAACGATTCAAGAAGCATTACCAGA 996
Query 855 AGGATTTGAAGAACGGGTTAAAGGGCGTGGAATCGTTTGGGAAGGATGGGTGGAACAACC 914
||| || ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 997 AGGGTTCGAAGAACGGATTAAAGGGCGTGGAATTGTTTGGGGAGGATGGGTGGAACAACC 1056
Query 915 TTTGATATTGTCTCATCCATCAGTAGGTTGCTTTGTGAACCACTGTGGGTTCGGTTCAAT 974
|||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||
Sbjct 1057 TTTGATATTGTCTCATCCATCAATAGGTTGCTTTGTGAACCATTGCGGGTTCGGTTCAAT 1116
Query 975 GTGGGAGTCTTTGGTTAGTGATTGCCAGATTGTGTTTATCCCACAATTGGCTGATCAAGT 1034
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 1117 GTGGGAGTCTTTGGTTAGTGATTGCCAGATTGTGTTTATTCCACAATTGGTTGATCAAGT 1176
Query 1035 TCTCATCA-CAAGATTGTTGACTGAAGAACTCCAAGTCTCAGTGAAGGTGCAGAGAGAAG 1093
||||| || | ||||||||||| ||||||||| | ||||| ||||| || ||||||| |
Sbjct 1177 TCTCA-CAACGAGATTGTTGACCGAAGAACTCGAGGTCTCCGTGAAAGTAAAGAGAGATG 1235
Query 1094 A--TTCC-GGATGGTTCTCGAAGGAGAACTTGCGAGATACGGTTAAATCTGTGATGGATA 1150
| || | || ||||| |||||||||| |||| | |||||||| ||||||||||||||||
Sbjct 1236 AAATTACTGGTTGGTTTTCGAAGGAGAGCTTGAGGGATACGGTCAAATCTGTGATGGATA 1295
Query 1151 GAGATAGTGAGATTGGAAATTTAGTGAAGAAGAATCATAAGAAATTGAAAGATACTTTGG 1210
| ||||||||||||| ||| |||||| || ||||||||||||| |||| || |||||||
Sbjct 1296 AAAATAGTGAGATTGGGAATCTAGTGAGGAGGAATCATAAGAAACTGAAGGAAACTTTGG 1355
Query 1211 TTAGTCCTGGATTGTTGAGTGGTTGTGCTGATAAGTTTGTAGAAGCATTGGAGAAT 1266
|||||||||||||||||||| ||| ||||||||||||||| || | ||| ||||||
Sbjct 1356 TTAGTCCTGGATTGTTGAGTAGTTATGCTGATAAGTTTGTTGACGAATTAGAGAAT 1411
Score = 484 bits (262), Expect = 7e-136
Identities = 516/635 (81%), Gaps = 31/635 (5%)
Strand=Plus/Plus
Query 1 ATGGGGTCAAAATTTCATGCTTTTATGTACCCATGGTTTGGTTTTGGTCATATGATTCCA 60
||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||
Sbjct 86 ATGGGGTCAAAGTTTCATGCTTTTCTTTATCCATGGTTTGGTTTTGGTCATATGATTCCG 145
Query 61 TATCTTCATCTAGCCAACAAACTAGCTGAGAAAGGTCATACCATCACTTTCTTC-CTTCC 119
|||||||||||||| |||||| ||||||| |||||||||| | |||||||| || ||
Sbjct 146 TATCTTCATCTAGCTAACAAATTAGCTGAAAAAGGTCATAGGGTTACTTTCTTGGCT-CC 204
Query 120 CAAGAAAGCTCATAAGCAGCTCCAACCTCTCAATCT-GTTCCCAGACAGTATTGTCTTGG 178
|||||||||||| || || ||| |||||||||| || ||||||| |||| ||| ||| |
Sbjct 205 CAAGAAAGCTCAGAAACAACTCGAACCTCTCAA-CTTGTTCCCAAACAGCATTCACTTCG 263
Query 179 AGCCTCTTTCTCTCCCTCCTGCCGACGGTCTCCCTTTTGGCGCCGAGACAGCCTCGGATC 238
|| | || |||| |||| || || ||||||||| ||||||| |||||| || ||||||
Sbjct 264 AGAATGTTACTCTTCCTCATGTTGATGGTCTCCCTGTTGGCGCAGAGACAACCGCGGATC 323
Query 239 TCCCAAACTCAACTAAGAAAC-CCATTT-TCCTTGCCATGGATCTCCTACGCGATCAGAT 296
|||| |||||| |||||| | || | | | ||||||||||| |||||||| |||||
Sbjct 324 TCCCGAACTCATCTAAGAGAGTCC-TCGCTGAT-GCCATGGATCTTCTACGCGAACAGAT 381
Query 297 CGAAGCTAAGGTCC-TTGCTTTGAAACCAGATCTAATCTTT-TTCGATTTTGTTCATTGG 354
|||| |||| | | || |||||||||| || ||||| ||| |||||||||||| |||||
Sbjct 382 TGAAGTTAAGATTCGTT-CTTTGAAACCTGACCTAAT-TTTCTTCGATTTTGTTGATTGG 439
Query 355 GTTCCAGAAATGGCAAAAGAGTTTGGAAT-AAAGAGTGTCAA-TTACCAGATCATATCGG 412
||||| ||||||||||||| || ||||| ||| ||||| || |||||||||||||||||
Sbjct 440 ATTCCACAAATGGCAAAAGAATTAGGAATCAAA-AGTGT-AAGTTACCAGATCATATCGG 497
Query 413 CAGCTTGTGTAGCTATGGTTCTT-GCACCTAGTGCTGAATTAGGGTT-TCCTCCGCC-GG 469
|||||| | |||||||| || || || ||| ||||||||||||| || |||||| || ||
Sbjct 498 CAGCTTTTATAGCTATGTTT-TTCGCTCCTCGTGCTGAATTAGG-TTCTCCTCCACCTGG 555
Query 470 ATTATCCTTTATCCAAAGTGGCGTTAAGTGGACATGACGCTAACGTCTGTTCTCTCTTTG 529
|| ||||| ||| ||||| || ||| ||||||||||||||||| ||| ||| ||||| |
Sbjct 556 GTT-TCCTTCATCAAAAGTAGCATTACGTGGACATGACGCTAACATCTATTCACTCTTCG 614
Query 530 CAAATTCACATG-AGCTTT-T-TG-G-TCTGATT-ACCAAAGGCCTTAAGAACTGTGACG 583
|||| ||| | | ||| | | | || || | |||| ||||||||||||||| ||||
Sbjct 615 CAAA--CACCCGCAAATTTCTCTTTGATC-GAGTCACCACAGGCCTTAAGAACTGCGACG 671
Query 584 TCGTTTCCATAAGGACTTGCGTGGAACTTGAAGGT 618
|| || |||||||||| || | ||| | ||||||
Sbjct 672 TCATTGCCATAAGGACATGTGCAGAAATCGAAGGT 706
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63604090515
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5