BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474192
Length=2305
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50610.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3537 0.0
AT3G20190.1 | Symbols: | Leucine-rich repeat protein kinase fa... 656 0.0
> AT1G50610.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr1:18742135-18744725 FORWARD LENGTH=2321
Length=2321
Score = 3537 bits (1915), Expect = 0.0
Identities = 2196/2328 (94%), Gaps = 34/2328 (1%)
Strand=Plus/Plus
Query 1 ATCGAATCGATTCCATTGCGCGTGTAACCGCAATGCGAAATTGGGAGAACCCGTTTACGC 60
||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 5 ATCAAATCGATTCCATTGCGCGTGTAACCGCAATGCGCAATTGGGAGGACCCGTTTACGC 64
Query 61 TTGCGTGTAACACGGCGTTGAAGAAGAATCTACCTTCTTGCATTTTTC-TCATCATCTTT 119
|||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 65 TTGCGTGTAACACGGCCTTGAAGAAGAATCTACCTTCTTGCA-TTTTCATCATCATCTTT 123
Query 120 ATCAGCGTGTTATGTCCGGTCGCAATGTCTCAGGTGGTTGTGCCGGATTCAGATGCAGAT 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 124 ATCAGCGTGTTATGTCCGGTGGCAATGTCTCAGGTGGTTGTGCCGGATTCAGATGCAGAT 183
Query 180 TGTCTCTTGAGATTCAAAGATACATTAGCAAATGGTTCAGAATTTAC-TAGTTGGGATCC 238
||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 184 TGTCTCTTGCGATTCAAAGATACATTAGCAAATGGTTCAGAATTT-CGTAGTTGGGATCC 242
Query 239 ATTAACATCACCATGTCAAGGAAACACAGCAAATTGGTTTGGTGTTCTTTGTAGCAATTA 298
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 243 ATTATCATCACCATGTCAAGGAAATACAGCAAATTGGTTTGGTGTTCTTTGTAGCAATTA 302
Query 299 CGTTTGGGGATTACAACTCGAGGGAATGGGTTTGACTGGGAAATTAAACCTCGACCCATT 358
|||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct 303 CGTTTGGGGATTACAACTTGAGGGAATGGGTTTGACCGGGAAACTAAACCTCGACCCATT 362
Query 359 GGTTCCTATGAAGAATCTGCGAACCATAAGCTTCATGAACAATAACTTCAATGGCCCAAT 418
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 GGTTCCAATGAAGAATCTGCGAACCATAAGCTTCATGAACAATAACTTCAATGGCCCAAT 422
Query 419 GCCTCAAGTTAAGAGGTTTACTTCGCTGAAATCTTTGTATTTGTCTAATAACCGGTTTTC 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 GCCTCAAGTTAAGAGGTTTACTTCGCTGAAATCTTTGTATTTGTCTAATAACCGGTTTTC 482
Query 479 GGGGGAGATACCCGCGGATGCATTTCGAGGTATGCCACTTTTGAAGAAAATTTTGTTGGC 538
||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 483 GGGGGAGATACCCGCAGATGCATTTCTAGGTATGCCACTTTTGAAGAAAATTTTGCTGGC 542
Query 539 GAATAACGCGTTCCGAGGAACAATTCCTTCTTCTCTGGCCTCATTGCCAATGCTTTTAGA 598
|||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 543 TAATAACGCATTCCGAGGAACAATTCCTTCTTCTCTAGCCTCTTTGCCAATGCTTTTAGA 602
Query 599 GTTGAGGCTAAATGGTAATCAATTTCAAGGGCAAATACCATCTTTTCAACAAAAGGATCT 658
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 603 GTTGAGGCTAAATGGTAATCAATTTCAAGGGCAAATACCATCTTTTCAACAGAAGGATCT 662
Query 659 TAAACTAGCTAGCTTTGAAAACAATGATCTTGATGGACCGATACCCGAAAGCCTTCGAAA 718
|||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct 663 TAAATTAGCTAGCTTTGAAAACAATGATCTCGATGGACCGATACCTGAAAGTCTTCGAAA 722
Query 719 CATGGATCCAGGCTCTTTTGCAGGTAACAAAGATTTGTGTGATGCTCCCTTAAGTCCATG 778
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 723 CATGGATCCAGGCTCTTTTGCAGGTAACAAAGGTTTGTGTGATGCTCCCTTAAGTCCATG 782
Query 779 TTCCCCTTCCTCTCCGGGAGTTCCTGTTGTTCCGGTATCTCCTGTTGATCCAAAATCTAC 838
|||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 783 TTCCTCTTCCTCTCCGGGGGTTCCTGTTGTTCCGGTATCTCCCGTTGATCCAAAATCTAC 842
Query 839 TTCTCCTTCCACGGGGAAAAAGACCGGATCTTTTTACACTCTAGCAATCATTTTGATTGT 898
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 843 TTCTCCTCCCACGGGGAAAAAGGCCGGATCTTTTTACACTCTAGCAATCATTTTGATTGT 902
Query 899 TATTGGCATAATACTAGTGATCATCGCGCTTGTGTTCTTTTTCGTTCAAACAAGAAGACG 958
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 903 TATTGGCATAATACTAGTGATCATCGCGCTTGTGTTCTGTTTCGTTCAATCAAGAAGACG 962
Query 959 AAATTTCTTGTCAGCTTATCCTTCAGCTG-G--AAAAGAAAGGATAGAGAGCTATAATTA 1015
||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||
Sbjct 963 TAATTTCTTGTCAGCTTATCCTTCTTCTGCGGGAAAAGAAAGGATAGAGAGCTATAATTA 1022
Query 1016 TCATCAATCCGCAAGCAAGAACAATAAACCCGCGGAATCCGTTGTGAATCACACAAGGAG 1075
|||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1023 TCATCAATCCACAAACAAGAACAATAAACCCGCAGAATCCGTA---AATCACACAAGGAG 1079
Query 1076 AGGATCAATGCCTGATCCAGGAGGAAGGCTTCTATTTGT-ACGAGACGACATTCAAAGAT 1134
|||||| ||||||||||||||||||||||||||||| || | | ||||| ||||||||||
Sbjct 1080 AGGATCGATGCCTGATCCAGGAGGAAGGCTTCTATTCGTGAGG-GACGATATTCAAAGAT 1138
Query 1135 TCGGTCTTCAAGATCTTTTGAGAGCTTCAGCTGAAGTTCTTGGTAGTGGAACATTTGGTG 1194
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1139 TCGATCTTCAAGATCTTTTGAGAGCTTCAGCTGAAGTTCTTGGTAGCGGAACATTTGGTG 1198
Query 1195 CTTCATACAAAGCCGCGATATCTAGTGGACAAACATTGGTTGTGAAGAGGTATAAACATA 1254
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 CTTCATACAAAGCAGCGATATCTAGTGGACAAACATTGGTTGTGAAGAGGTATAAACATA 1258
Query 1255 TGAACAATGTCGGAAGAGATGAGTTTCATGAGCATATGAGACGGTTAGGGAGATTAAACC 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGAACAATGTCGGAAGAGATGAGTTTCATGAGCATATGAGACGGTTAGGGAGATTAAACC 1318
Query 1315 ATCCGAATATATTGCCTCTCGTCGCTTTACTATTACC--AGA-AG-AGAAGCTTCTAATC 1370
|||| ||||||||||||||||| |||| ||||||||| ||| || ||||||||||| ||
Sbjct 1319 ATCCAAATATATTGCCTCTCGTTGCTT-ACTATTACCGTAGAGAGGAGAAGCTTCTAGTC 1377
Query 1371 ACTCAATTAATGCCTAATAGTAGCTTGGCAAACCATCTTCATGCGAATCATTCCGCTGGA 1430
||| |||| ||||| || ||||||||||||| |||||||||||||||| |||||||||||
Sbjct 1378 ACTGAATTTATGCCCAACAGTAGCTTGGCAAGCCATCTTCATGCGAATAATTCCGCTGGA 1437
Query 1431 TTGGATTGGATAACACGTCTAAAGATCATAAAAGGAGTAGCAAAGGGTTTATCTTACTTG 1490
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TTGGATTGGATAACACGTTTAAAGATCATAAAAGGAGTAGCAAAGGGTTTATCTTACTTG 1497
Query 1491 TTCGACGAG-TTACCAACACTAACGATACCTCATGGTCATATAAAGTCATCGAACATTGT 1549
|| |||||| || ||||||||||| || |||||||||||||| ||||||||||| |||||
Sbjct 1498 TTTGACGAGCTT-CCAACACTAACAATCCCTCATGGTCATATGAAGTCATCGAATATTGT 1556
Query 1550 TTTAGACGAATCATTTGAACCATTGTTAACAGATTACGCTCTTAGACCGGTGATGAGCTC 1609
||||||||| ||||| || ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1557 TTTAGACGATTCATTCGAGCCATTGTTAACAGATTACGCTCTAAGACCTATGATGAGCTC 1616
Query 1610 AGAGCACGCACATAACTTCATGACAGCGTACAAATCGCCAGAGTATAGACCATCGAAAGG 1669
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1617 AGAGCACGCACATAACTTCATGACAGCTTACAAATCGCCAGAGTATAGACCTTCGAAAGG 1676
Query 1670 GCAAGTCATAACGAAGAAGACAGATGTTTGGTGTTTCGGTGTGTTGATCTTGGAAGTTTT 1729
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1677 ACAAATCATAACGAAGAAGACAGATGTTTGGTGTTTTGGTGTGTTGATCTTGGAAGTTTT 1736
Query 1730 GACAGGGAGATTCCCTGAAAATTACTTAACGCAAGGTTATGATTCGAACATGAGTCTTGT 1789
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1737 GACAGGAAGATTCCCTGAAAATTACTTAACGCAAGGTTATGATTCTAACATGAGTCTTGT 1796
Query 1790 GACTTGGGTGAACGATATGGTCAAGGAGAAGAAAACAGGTGACGTGTTCGACAAGGAAAT 1849
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1797 GACTTGGGTTAACGATATGGTTAAGGAGAAGAAAACAGGTGACGTGTTCGACAAGGAAAT 1856
Query 1850 GAAAGGAAAAAAGAATTGTAAAGCGGAAATGATCAATTTGTTGAAAGTTGGTTTGAGATG 1909
|||||| || ||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1857 GAAAGGGAAGAAGAATTGTAAAGCGGAAATGATTAATTTGTTGAAAATTGGTTTGAGATG 1916
Query 1910 CTGCgaagaagaagaagagaggag-attggacatgagagaagttgtggagatggttgaga 1968
||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||
Sbjct 1917 TTGCGAAGAAGAAGAAGAGAGGAGGAT-GGATATGAGAGAAGTTGTGGAGATGGTTGAGA 1975
Query 1969 tgttgagagaaggagaaTCTGAAGATGATTTTGGTTCTATGGATCATCGAGGGACTCATA 2028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 TGTTGAGAGAAGGAGAATCTGAAGATGATTTTGGTTCTATGGATCATCGAGGGACTCATA 2035
Query 2029 ATAATTTATATTCTTCCATGTTGTTAGACGATGATGACTTTGGTTTCTCGATGAATCGAT 2088
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2036 ATAATGTGTATTCTTCCATGTTGTTAGACGATGATGACTTTGGTTTCTCGATGAATCGAT 2095
Query 2089 GAGAGTTTCAGATTTTCGGTTTCTTTTAGGAATATTGAAAAAGTTTTAAAAAA-GGTGAA 2147
||| |||||||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 2096 GAG--TTTCAGATTTTCGGTTGCTTTTAGGAATATTGAAAAAGTTTCAAAAAAAGGTGGT 2153
Query 2148 TATTCCGGCAGAAGTAGCTTCACCGGAGCCGGAGAGAAGAATGAAGAACATGCGCTTGGT 2207
||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 2154 TATTCCGGCGGAAGTAGCTTCACCGGAGCCGGAGGGAAGAATGAAGAACATGTGCTTGGT 2213
Query 2208 TTTTCTTCTTCTTACGGTCAATGCAGATAA----TG-A-GC-AAT-TAATGGACTAAAAC 2259
|||||||||| ||| ||| ||||||||||| || | | ||| ||||||||||||||
Sbjct 2214 TTTTCTTCTTTTTAAGGTTAATGCAGATAAAAAATGTATGAGAATGTAATGGACTAAAAC 2273
Query 2260 ATGTA--TATATTATGTATCTGTATTACTGTATGTCACCATCATCATC 2305
||||| |||||||||||||||||||| ||||| | ||||||||||||
Sbjct 2274 ATGTAAATATATTATGTATCTGTATTAATGTATATTACCATCATCATC 2321
> AT3G20190.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:7044943-7047390 FORWARD LENGTH=2272
Length=2272
Score = 656 bits (355), Expect = 0.0
Identities = 977/1265 (77%), Gaps = 92/1265 (7%)
Strand=Plus/Plus
Query 866 ATCTTT-TTACACTC-TAGCAATCATTTTGATTGTTATTGGCATAATACTAG-TGATCAT 922
|||||| || || || | ||||| || ||||||| ||||| |||||||| | |||||||
Sbjct 882 ATCTTTCTT-CA-TCATTGCAATTGTTCTGATTGTCATTGGGATAATACT-GATGATCAT 938
Query 923 CGCGCTTGTGTTCTTTTTCGTTCAAACAAGAAGACG-AA-ATTTCTTGTCAGCTTATCCT 980
|||||||| ||| | || |||| || |||||||| || | | ||||| ||||||||
Sbjct 939 TTCGCTTGTGGTCTGTATCCTTCATACCAGAAGACGCAAGA-GT-TTGTCGGCTTATCCA 996
Query 981 TCAGCTGGAAAAGAAAGGATAGAGAGCTATAATTATC-ATCAATCCGCAAGCAAGAACAA 1039
|| || || | || |||| ||||| || || || | |||||| | | | | || |
Sbjct 997 TCCGCGGGTCAGGACAGGACAGAGAAATACAACTA-CGATCAAT-C-TACG-GACAAGGA 1052
Query 1040 TAAACCCGCGGAATCCGTTGTGAATCACAC-A--AGGAGAGGATCAATGCCTGATCCAGG 1096
|||| | || || || || || | |||| | || |||||| || | || ||| |||
Sbjct 1053 TAAAGCTGCAGATTCTGTAACGAGTTACACTAGTAGAAGAGGAGCAGTACCGGAT-CAGA 1111
Query 1097 AGGAAGGCTTCTATTTGTACGAGACGACATTCAAAGATTCGGTCTTCAAGATCTT-TTGA 1155
| || ||| | ||| | | ||| |||||||||||||| | |||||||||||| || |
Sbjct 1112 ATAAACTCTTGT-TTT-TGCAAGATGACATTCAAAGATTTGACCTTCAAGATCTTCTT-A 1168
Query 1156 GAGCTTCAGCTGAAGTTCTTGGTAGTGGAA-CATTTGG-TGCTTCATACAAAGCCGCGAT 1213
|||| || |||||||||||||| || |||| | ||||| | |||| || ||| | | |||
Sbjct 1169 GAGCCTCTGCTGAAGTTCTTGGGAGCGGAAGC-TTTGGCT-CTTCTTATAAAACTGGGAT 1226
Query 1214 ATCTAGTGGACAAACATTGGTTGTGAAGAGGTATAAACATATGAACAATGTCGGAAGAGA 1273
| ||| ||||| | |||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1227 AAATAGCGGACAGATGCTGGTCGTGAAGAGGTATAAACATATGAACAATGTTGGAAGAGA 1286
Query 1274 TGAGTTTCATGAGCATATGAGACGGTTAGGGAGATT-AAACCATCCGAATATATTGCCTC 1332
|||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||
Sbjct 1287 TGAGTTTCATGAGCATATGAGACGGTTAGGGAGATTGAAAC-ATCCGAATCTGTTGCCTA 1345
Query 1333 TCGTCGCTTTACTATTACC--AGA-A-GAGAAGCTTCTA-ATCACTCAATTAATGCCTAA 1387
| || |||| ||||||||| ||| | |||||||| || ||| || | || ||||| ||
Sbjct 1346 TTGTGGCTT-ACTATTACCGCAGAGAAGAGAAGCT-CTTGATCGCTGAGTTCATGCCAAA 1403
Query 1388 TAGTAGCTTGGCAAACCATCTTCATGCGAATCATTCCGCTGGATT----GG-ATTGGAT- 1441
| |||||||||||| ||||||||| ||||||||||| | ||||| || |||||||
Sbjct 1404 TCGTAGCTTGGCAAGCCATCTTCACGCGAATCATTCTG-TGGATCAACCGGGATTGGATT 1462
Query 1442 ----AACACGTCTAAAGATCATAAAAGGAGTAGCAAAGGGTTTATCTTACTTGTTCGACG 1497
|||| | |||||||| ||| ||||||| || ||||||||| |||||||||| |||
Sbjct 1463 GGCCAACAAGGCTAAAGATTATACAAGGAGTGGCTAAGGGTTTAGGTTACTTGTTCAACG 1522
Query 1498 AGTTACCAACACTAACGATACCTCATGGTCATATAAAGTCATCGAACATTGTTTTAGACG 1557
|| || |||| ||||| || ||||| |||||| | |||||||||||| |||| || ||||
Sbjct 1523 AGCTAACAACCCTAACAATCCCTCACGGTCATCTCAAGTCATCGAACGTTGTATTGGACG 1582
Query 1558 AATCATTTGAACCATTGTTAACAGATTACGCTCTTAGACCGGTGATGAGCTCAGAGCACG 1617
|||||||||| ||| | |||| ||||| || || ||||| ||||||| ||||||||| |
Sbjct 1583 AATCATTTGAGCCACTCCTAACCGATTATGCACTAAGACCAGTGATGAACTCAGAGCA-G 1641
Query 1618 -CACATAA-CTTCATGA-CAGCGTACAAATCGCCAGAGTATAGACCATCGAAAGGG-CAA 1673
| || || || |||| | | || ||||| ||||||||||| | | |||||| ||
Sbjct 1642 TCTCACAATCTA-ATGATCT-CTTATAAATCACCAGAGTATAG-CT-T--AAAGGGACA- 1694
Query 1674 GTCATAACGAAGAAGACAGATGTTTGGTGTTTCGGTGTGTTGATCTTGGAAG-TTTTGAC 1732
|| |||| || ||||||||||||||||| | || || ||||||||||| | |||| ||
Sbjct 1695 -TC-TAACTAAAAAGACAGATGTTTGGTGCCTGGGGGTATTGATCTTGGA-GCTTTTAAC 1751
Query 1733 AGGGAGATTCCCTGAAAATTA-CTTAACGC-AAGGTTATGATTCGAACATGAGTCTTGTG 1790
||| || || || || ||||| || || || |||| || ||| | |||||||| || ||
Sbjct 1752 AGGTAGGTTTCCGGAGAATTATCT-AA-GCCAAGGGTACGATGCTAACATGAGCCTCGTA 1809
Query 1791 ACTTGGGTGAACGATATGGTCAAGGAGAAGAAAACAGGTGACGTGTTCGACAAGGAAATG 1850
|||||||||| | | ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1810 ACTTGGGTGAGCAACATGGTTAAGGAGAAGAAAACAGGTGACGTGTTTGACAAGGAAATG 1869
Query 1851 AAAGGAAA-AAAGAATTGTAAAGCGGAAATGATCAAT-TTGTTGAAAGTTGGTTTGAGAT 1908
| || || ||| || || ||||| || ||| | || || |||||| | || ||||| |
Sbjct 1870 ACTGGGAAGAAA-AACTGCAAAGCAGAGATGCTAAACCTT-TTGAAAATCGGGTTGAGTT 1927
Query 1909 GCTGCgaagaagaagaagagaggag-attggacatgagagaagttgtggagatggttgag 1967
| ||||||||||| ||||| ||||| || ||| |||||||| | |||||||| | | |||
Sbjct 1928 GTTGCGAAGAAGATGAAGAAAGGAGGAT-GGAGATGAGAGATGCTGTGGAGAAGATAGAG 1986
Query 1968 atgttgagagaaggagaaTCTGA-AGATGATTTTGGTTCTATGGATCATCGAGGGACTCA 2026
| ||| | ||||||||| | ||| | ||||||| | | |||||| | || ||
Sbjct 1987 AGGTTAAAAGAAGGAGAGTTTGACA-ATGATTT-----C---G---CATCGACG-ACACA 2033
Query 2027 TAATAATTTATATTCTTC-CATGTTGTTAGACGATGATGACTTTGGTTTCTCGATGAATC 2085
|||| | | | | |||| | |||| ||||||| ||||||||||||||| | |||||||
Sbjct 2034 TAATG-TCT-T-TGCTTCTCG-GTTGATAGACGACGATGACTTTGGTTTCGCCATGAATC 2089
Query 2086 GATGA 2090
|||||
Sbjct 2090 GATGA 2094
Score = 411 bits (222), Expect = 2e-113
Identities = 501/632 (79%), Gaps = 33/632 (5%)
Strand=Plus/Plus
Query 168 TCAGATGCAGATTGTCTCTTGAGATTCAAAGATACATTAGCAAATGGTTCAGAAT--TTA 225
||||| |||||||| ||||||||||| |||||||| || | |||| || | | |||
Sbjct 205 TCAGACGCAGATTGCCTCTTGAGATTTAAAGATACTTTGGTTAATGCATC-G-TTCATTA 262
Query 226 -CTAGTTGGGATCCATTAACA--TCACCATGTCAAG-GAAACACAGCA-AATTGGTTTGG 280
| ||||||||||| || || || || ||| ||| ||||| ||| | |||||||| ||
Sbjct 263 GC-AGTTGGGATCC-TT-CCATCTCCCCGTGT-AAGCGAAACTCAG-AGAATTGGTTCGG 317
Query 281 TGTTCT-T-TG-TAGCAATTACGTTTGGGGATTACAACTCGAGGGAATGGGTTTGACTGG 337
|||||| | || || | | | |||||||| |||||||||| |||||||| || || ||
Sbjct 318 TGTTCTCTGTGTTACCGGTAATGTTTGGGGCCTACAACTCGAAGGAATGGGCTTAACCGG 377
Query 338 GAA-ATTAAACCTCGACCCATTGGTTCCTATGAAGAATCTGCGAACCATAAGCTTCATGA 396
||| || |||| || ||||| | | | || |||||||| |||||| | ||||||||||
Sbjct 378 GAAGCTT-GACCTTGAACCATTAGCTGCAATCAAGAATCTACGAACCTTGAGCTTCATGA 436
Query 397 ACAATAACTTCAATGGCCCAATGCC-TCAAGTTAAGAGGTTTACTTCGCTGAAATCTTTG 455
|||| || || || || ||||||| || || |||| ||| | || ||||||| |||
Sbjct 437 ACAACAAATTTAACGGTTCAATGCCATC-TGTCAAGAATTTTGGTGCGTTGAAATCATTG 495
Query 456 TATTTGTCTAATAACCGGTTTTCGGGGGAGATACCCGCGGATGCATTTCGA-GGTATGCC 514
|| |||||||| ||||||||| | |||||||||||||||||||| ||| || |||||| |
Sbjct 496 TACTTGTCTAACAACCGGTTTACAGGGGAGATACCCGCGGATGCGTTT-GATGGTATG-C 553
Query 515 A-CTTTTGAAGAAAATTTTGTTGGCGAATAACGCGTTCCGAGGAACAATTCCTTCTTCTC 573
| | ||||||||| || ||||||| || |||||||| ||||| | || |||||||||
Sbjct 554 ATCATTTGAAGAAGCTTCTGTTGGCTAACAACGCGTTTCGAGGGAGTATCCCTTCTTCTT 613
Query 574 TGGCCTCA-TTGCCAATGCTTTTAGAGTTGAGGCTAAATGGTAATCAATTTCAAGGGCAA 632
| | || | |||||||||||||||||||||||||||||||| ||||| ||||| ||| ||
Sbjct 614 TAG-CTTATTTGCCAATGCTTTTAGAGTTGAGGCTAAATGGGAATCAGTTTCATGGGGAA 672
Query 633 ATACCATCTTTTCAACAAAAGGATCTTAAACTAGCTAGCTTTGAAAACAATGATCTTGAT 692
||||| | |||| |||||||||| ||||| | |||||||| ||||||||||| || ||
Sbjct 673 ATACCTTATTTTAAACAAAAGGACCTTAAGTTGGCTAGCTTCGAAAACAATGACCTCGAG 732
Query 693 GGACCGATACCCGAAAGCCTTCGAAACATGGATCCAGGCTC-TTTTGCAGGTAACAAAGA 751
||||| ||||| ||||||||| | ||||||||||| | ||| |||| |||| ||||| ||
Sbjct 733 GGACCTATACCGGAAAGCCTTAGCAACATGGATCCTGTCTCCTTTT-CAGGGAACAA-GA 790
Query 752 T-TTGTGTGATGCTCC-CTTAAGTCCATGTTC 781
||||||| | |||| || ||| ||||||||
Sbjct 791 ACTTGTGTGGTCCTCCACT-AAGCCCATGTTC 821
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114407042055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5