BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474202
Length=1921
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50700.1 | Symbols: CPK33 | calcium-dependent protein kinase... 2928 0.0
AT3G20410.1 | Symbols: CPK9 | calmodulin-domain protein kinase ... 1626 0.0
AT1G76040.2 | Symbols: CPK29 | calcium-dependent protein kinase... 381 1e-104
> AT1G50700.1 | Symbols: CPK33 | calcium-dependent protein kinase
33 | chr1:18781914-18784582 FORWARD LENGTH=2063
Length=2063
Score = 2928 bits (1585), Expect = 0.0
Identities = 1824/1937 (94%), Gaps = 25/1937 (1%)
Strand=Plus/Plus
Query 1 CCCGAACTTTTCATGATTCTTCTGCAATTCAACTTT-----C---C-TTTGTTCT-GATC 50
||| |||||||||||||||||||||||||||||||| | | |||||||| |||
Sbjct 14 CCCCAACTTTTCATGATTCTTCTGCAATTCAACTTTCCAAACAATCATTTGTTCTAAATC 73
Query 51 TCTTAAACCCAAATCATTGCTTGATGAAACAAGTTCGTTGT-CTGTAGTTGCTGAGTTGA 109
|||||||| |||||| ||||||||| || |||||||||||| || |||||||||| |||
Sbjct 74 TCTTAAACACAAATCTTTGCTTGATTAACCAAGTTCGTTGTCCT-TAGTTGCTGAATTG- 131
Query 110 TACACTTCCACGTCTCCTAGTATAAACCCA-CC-aaaaaaaGATCAAACCTTTGCTT-TT 166
|| | | |||||| |||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 132 TA-GCCTATACGTCTTCTAGTATAAACCCACCCAAAAAAAAGATCAAACCTTTGCTTATT 190
Query 167 TCTCTGTTTCATTTTCTTGATTCTCTACAAATTTTTACGCAAGTTTCGATCTTTTGTCTC 226
||||||||| || | | ||||||||| |||||||| ||| ||| |||||||||| |||||
Sbjct 191 TCTCTGTTTTATATCCCTGATTCTCTGCAAATTTTCACGAAAGGTTCGATCTTTGGTCTC 250
Query 227 TGGGTCGTGACATTTTGAGCTGATTTAGCTAAAACAGAGACGAAAAAGCAATGGGGAATT 286
|||||||||| |||||||||| ||||||||||| || ||||||| |||||||||||||
Sbjct 251 TGGGTCGTGATATTTTGAGCTTATTTAGCTAAAGCAAAGACGAACGGGCAATGGGGAATT 310
Query 287 GCTTAGCCAAGAAATATGGAGTGGTGATGAAACCACAACAAAATGGTGAAAGATCAGCTG 346
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 311 GCTTAGCCAAGAAATACGGATTGGTGATGAAACCACAACAAAATGGTGAAAGATCAGTTG 370
Query 347 AGATCGAGAACAGAGGAAGGAGTAACCACCAATATCCGCCGGAGAA-A-CCTACTGGAAC 404
|||||||||||||| ||||||| | ||||||| ||||| | | || | || || |||||
Sbjct 371 AGATCGAGAACAGAAGAAGGAGCACCCACCAAGATCCGTC-TAAAATATCC-ACCGGAAC 428
Query 405 GAATCAACCACCGCCGTGGCGGAATCCGGCGAAACACAGTGCTGCTGCAGCTATACTCGA 464
|||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 429 GAATCAACCACCACCTTGGCGGAATCCAGCGAAACACAGTGGTGCTGCAGCTATACTCGA 488
Query 465 GAAGCCGTACGAAGACGTGAAACTGTTCTACACGCTGAGCAAAGAATTGGGTCGAGGCCA 524
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 489 GAAGCCGTACGAAGACGTGAAACTGTTCTACACTTTGAGCAAAGAATTGGGTCGAGGCCA 548
Query 525 GTTTGGAGTAACGTATCTGTGCACAGAGAAGTCGACGGGGAAGAGATTCGCTTGCAAGTC 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 GTTTGGAGTAACGTATCTGTGCACAGAGAAGTCGACGGGGAAGAGATTCGCTTGCAAGTC 608
Query 585 GATTTCGAAGAAGAAACTTGTGACGAAAGCTGATAAAGAAGATATGAGGAGAGAGATTCA 644
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 609 GATTTCCAAGAAGAAACTTGTGACGAAAGGTGATAAAGAAGATATGAGGAGAGAGATTCA 668
Query 645 GATCATGCAGCATTTGAGTGGACAACCTAACATTGTTGAGTATAAAGGAGCTTATGAAGA 704
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 669 GATTATGCAGCATTTGAGTGGACAACCTAACATTGTTGAGTTTAAAGGAGCTTATGAAGA 728
Query 705 TGAGAAAGCTGTGAATTTGGTTATGGAGCTTTGTGCTGGTGGTGAATTGTTTGATAGAAT 764
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 729 TGAGAAAGCTGTGAATTTGGTTATGGAGCTTTGTGCTGGTGGTGAATTGTTCGATAGGAT 788
Query 765 TTTAGCAAAGGGACATTACAGTGAGAGAGCAGCTGCTTCTGTTTGTAGACAGATTGTTAA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 TTTAGCAAAGGGACATTACAGTGAGAGAGCAGCTGCTTCTGTTTGTAGACAGATTGTTAA 848
Query 825 TGTTGTCAACATTTGTCATTTCATGGGTGTGATGCATAGAGACTTAAAGCCTGAGAATTT 884
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 849 TGTTGTCAATATTTGTCATTTCATGGGTGTGATGCATAGAGACTTAAAGCCTGAGAATTT 908
Query 885 CTTGTTATCTAGCAAAGATGAGAAGGCTCTTATTAAAGCCACTGATTTCGGATTATCGGT 944
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 909 CTTGTTATCTAGCAAAGATGAGAAGGCTCTTATCAAAGCCACTGATTTCGGATTATCAGT 968
Query 945 CTTTATTGAAGAAGGGAGAGTGTATAAAGGTATAGTTGGGAGTGCATATTATGTAGCTCC 1004
|||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 969 CTTTATCGAAGAAGGGAGAGTGTATAAAGATATAGTTGGGAGTGCATATTATGTTGCTCC 1028
Query 1005 TGAAGTTTTGAAGCGTAGATACGGTAAAGAAATCGATATATGGAGTGCTGGAATTATACT 1064
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1029 TGAAGTTTTGAAGCGGAGATATGGTAAAGAAATCGATATATGGAGTGCTGGAATTATACT 1088
Query 1065 ATACATTCTACTTAGCGGTGTGCCTCCGTTTTGGGCTGAAACCGAGAAAGGGATATTTGA 1124
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1089 ATACATTCTACTTAGTGGTGTGCCTCCGTTTTGGGCTGAAACGGAGAAAGGGATATTTGA 1148
Query 1125 TGCTATATTGGAAGGTGAAATCGACTTTGAATCCCAACCTTGGCCTTCAATTTCCAATAG 1184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1149 TGCTATATTGGAAGGTGAAATCGACTTTGAATCCCAACCTTGGCCCTCAATTTCCAATAG 1208
Query 1185 TGCTAAAGATTTGGTACGCAGAATGTTGACACAAGATCCGAAAAGACGGATTTCTGCTGC 1244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1209 TGCTAAAGATTTGGTACGTAGAATGTTGACACAAGATCCGAAAAGACGGATTTCTGCTGC 1268
Query 1245 TGAAGTTCTTCAGCATCCATGGCTAAGAGAAGGTGGAGAAGCATCAGATAAGCCTATTGA 1304
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1269 TGAAGTTCTTAAGCATCCATGGCTAAGAGAAGGTGGAGAAGCATCGGATAAGCCTATTGA 1328
Query 1305 TAGTGCTGTTCTCTCAAGGATGAAGCAATTTAGAGCGATGAATAAACTAAAGAAACTTGC 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 TAGTGCTGTTCTCTCAAGGATGAAGCAATTTAGAGCGATGAATAAACTAAAGAAACTTGC 1388
Query 1365 TTTAAAGGTCATTGCGGAGAACATTGACACGGAAGAAATACAAGGCTTAAAGGCGATGTT 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 TTTAAAGGTCATTGCGGAGAACATTGACACGGAAGAAATACAAGGCTTAAAGGCGATGTT 1448
Query 1425 TGCTAATATAGACACAGACAATAGTGGTACAATCACATATGAAGAACTGAAAGAAGGATT 1484
|||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||||||
Sbjct 1449 TGCTAATATAGATACAGACAATAGTGGTACTATCACATACGAAGAATTGAAAGAAGGATT 1508
Query 1485 AGCCAAACTGGGATCAAAACTCACTGAAGCTGAAGTGAAACAGCTCATGGATGCTGCTGA 1544
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1509 AGCCAAACTGGGATCAAGACTCACTGAAGCTGAAGTGAAACAGCTCATGGATGCTGCTGA 1568
Query 1545 TGTTGATGGAAATGGGTCAATTGATTACATTGAGTTTATTACTGCAACAATGCATAGACA 1604
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1569 CGTTGATGGAAATGGGTCAATAGATTACATTGAGTTTATTACTGCAACAATGCATAGACA 1628
Query 1605 TAGGCTTGAAAGTAATGAAAACCTTTACAGAGCCTTCCAACATTTTGACAAAGATGGGTG 1664
|||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||| |
Sbjct 1629 TAGGCTTGAAAGTAATGAGAACGTTTACAAAGCCTTCCAACATTTTGACAAAGATGGGAG 1688
Query 1665 TGGATACATTACGATAGACGAGCTAGAGGCTGCTTTGAAGGAATATGGAATGGGAGATGA 1724
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1689 TGGATACATTACGACAGACGAGCTAGAGGCTGCTTTGAAGGAATATGGAATGGGAGATGA 1748
Query 1725 TGCTACAATCAAAGAGATTTTGTCAGATGTCGACGCCGATAATGACGGTAGAATTAACTA 1784
|||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct 1749 TGCTACTATCAAAGAGATTTTGTCTGATGTCGACGCTGATAATGACGGTAGAATCAACTA 1808
Query 1785 TGAAGAGTTTTGTGCTATGATGAGAAGTGGGAATCCACAACAACCAAGACTATTCTAACA 1844
||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1809 TGACGAGTTTTGTGCTATGATGAGAAGTGGGAATCCACAACAACCAAGATTGTTCTAACA 1868
Query 1845 CATTTTATTTGTGTCTTCTATGTCTGAATCTAATCCAAAAAGACAAGAGTTGTATTATTA 1904
||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct 1869 TATTTTATTTGT--CTTCT--GTCTGAATCTAATCAAAAAAGACAAGAGTGGTATTATTA 1924
Query 1905 TTGTTGTTCAGGCAAAA 1921
|||||||| ||||||||
Sbjct 1925 TTGTTGTTTAGGCAAAA 1941
> AT3G20410.1 | Symbols: CPK9 | calmodulin-domain protein kinase
9 | chr3:7116201-7119121 FORWARD LENGTH=2110
Length=2110
Score = 1626 bits (880), Expect = 0.0
Identities = 1217/1381 (88%), Gaps = 18/1381 (1%)
Strand=Plus/Plus
Query 457 ATACTCGAGAAGC-CGTACGAAGACGTGAAACTGTTCTACACGCTGAGCAAAGAATTGGG 515
||||| ||||| | | | |||||||||||| || || ||||| || | ||||| | ||
Sbjct 422 ATACTAGAGAA-CGCTTTCGAAGACGTGAAGCTCTTTTACACATTGGGTAAAGAGCTAGG 480
Query 516 TCGAGGCCAGTTTGGAGTAACGTATCTGTGCACAGAGAAGTCGACGGGGAAG-AGATTCG 574
||| || || ||||| ||||||||||||||||||||||| || ||||||||| || | ||
Sbjct 481 TCGTGGTCAATTTGGGGTAACGTATCTGTGCACAGAGAATTCCACGGGGAAGAAG-TACG 539
Query 575 CTTGCAAGTCGATTTCGAAGAAGAAACTTGTGACGAAAGCTGATAAAGAAGATATGAGGA 634
||||||| ||||| ||||||||||| || ||||| ||||||||||| || ||||||||||
Sbjct 540 CTTGCAAATCGATCTCGAAGAAGAAGCTGGTGACTAAAGCTGATAAGGATGATATGAGGA 599
Query 635 GAGAGATTCAGATCATGCAGCATTTGAGTGGACAACCTAACATTGTTGAGTATAAAGGAG 694
||||||||||||| ||||||||||||||||| || ||||| ||||| |||| ||||||||
Sbjct 600 GAGAGATTCAGATAATGCAGCATTTGAGTGGGCAGCCTAATATTGTGGAGTTTAAAGGAG 659
Query 695 CTTATGAAGATGAGAAAGCTGTGAATTTGGTTATGGAGCTTTGTGCTGGTGGTGAATTGT 754
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 660 CTTATGAGGATGAGAAAGCTGTGAATTTGGTGATGGAGCTTTGTGCTGGTGGTGAATTGT 719
Query 755 TTGATAGAATT-TTAGCAAAGGGACATTACAGTGAGAGAGCAGCTGCTTCTGTTTGTAGA 813
|||||||||| || || ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 720 TTGATAGAATCATT-GCTAAGGGACATTACACTGAGAGAGCTGCTGCTTCTGTTTGTAGA 778
Query 814 CAGATTGTTAATGTTGTCAACATTTGTCATTTCATGGGTGTGATGCATAGAGACTTAAAG 873
|||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct 779 CAGATTGTGAATGTTGTCAAGATTTGTCATTTCATGGGTGTGTTGCATAGAGACTTGAAG 838
Query 874 CCTGAGAATTTCTTGTTATCTAGCAAAGATGAGAAGGCTCTT-ATTAAAGCCACTGATTT 932
||||||||||||||| | ||||||||||||||||||||| || || || || ||||||||
Sbjct 839 CCTGAGAATTTCTTGCTCTCTAGCAAAGATGAGAAGGCT-TTGATCAAGGCTACTGATTT 897
Query 933 CGGATTATCGGTCTTTATTGAAGAAGGGAGA-GTGTATAAAGGTATAGTTGGGAGTGCAT 991
|||||| || |||||||||||||| |||| | || |||| || ||| |||||||||||||
Sbjct 898 CGGATTGTCTGTCTTTATTGAAGA-GGGAAAAGTATATAGAGATATTGTTGGGAGTGCAT 956
Query 992 ATTATGTAGCTCCTGAAGTTTTGAAG-CGTAGATACGGTAAAGAAATCGATATATGGAGT 1050
| ||||| ||||| ||||| || | | || ||||| || |||||| | ||||| ||||||
Sbjct 957 ACTATGTTGCTCCAGAAGTCTT-ACGTCGCAGATATGGGAAAGAAGTTGATATCTGGAGT 1015
Query 1051 GCTGGAATTATACT-ATACATTCTACTTAGCGGTGTGCCTCCGTTTTGGGCTGAAACCGA 1109
|||||||| || || |||||||||||| ||||||||||| |||||||||||||| || ||
Sbjct 1016 GCTGGAATCAT-CTTATACATTCTACTCAGCGGTGTGCCCCCGTTTTGGGCTGAGACTGA 1074
Query 1110 GAAAGGGATATTTGATGCTATATTGGAAGGTGAAATCGACTTTGA-ATCCCAACCTTGGC 1168
|||||| ||||||||||||||||||||||| | ||||||||||| | || |||| ||||
Sbjct 1075 GAAAGGAATATTTGATGCTATATTGGAAGGCCATATCGACTTTGAGAGCC-AACCATGGC 1133
Query 1169 CTTCAATTTCCAATAGTGCTAAAGATTTGGTACGCAGAATGTTGACA-CAAGATCCGAAA 1227
| ||||| |||| ||||| |||||||||||||| ||||||||||| | ||||| |||
Sbjct 1134 CGTCAATCTCCAGCAGTGCCAAAGATTTGGTACGTAGAATGTTGACTGCG-GATCCAAAA 1192
Query 1228 AGACGGATTTCTGCTGCTGAAGTTCTTCAGCATCCATGGCTAAGAGAAGGTGGAGAAGCA 1287
|| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1193 AGGCGGATTTCTGCTGCTGATGTTCTTCAGCATCCATGGCTTAGAGAAGGTGGAGAAGCA 1252
Query 1288 TCAGATAAGCCTATTGATAGTGCTGTTCTCTCAAGGATGAAGCAATTTAGAGCGATGAAT 1347
||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1253 TCAGACAAGCCAATTGACAGTGCTGTTCTCTCAAGGATGAAACAATTTAGAGCAATGAAT 1312
Query 1348 AAACTAAAGAAACTTGCTTTAAAGGTCATTGCGGAGAACATTGACACGGAAGAAATACAA 1407
|| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct 1313 AAGCTAAAGAAACTTGCTTTAAAGGTCATAGCGGAGAATATTGACACGGAAGAAATCCAA 1372
Query 1408 GGCTTAAAGGCGATGTTTGCTAATATAGACACAGACAATAGTGGTACAATCACATATGAA 1467
|| || ||||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||||
Sbjct 1373 GGATTGAAGGCAATGTTTGCTAACATAGACACTGACAACAGTGGCACAATCACTTATGAA 1432
Query 1468 GAACTGAAAGAAGGATTAGCCAAACTGGGATCAAAACTCACTGAAGCTGAAGTGAAACAG 1527
|||||||||||||||||||||||| ||||||| |||||||| || || ||||||||||||
Sbjct 1433 GAACTGAAAGAAGGATTAGCCAAATTGGGATCTAAACTCACAGAGGCAGAAGTGAAACAG 1492
Query 1528 CTCATGGATGCTGCTGATGTTGATGGAAATGGGTCAATTGATTACATTGAGTTTATTACT 1587
|||||||||||||||||||||||||| || ||||| || || ||||| |||||||||||
Sbjct 1493 CTCATGGATGCTGCTGATGTTGATGGGAACGGGTCCATCGACTACATAGAGTTTATTACA 1552
Query 1588 GCAACAATGCATAGACATAGGCTTGAAAGTAATGAAAACCTTTACAGAGCCTTCCAACAT 1647
|||||||||||||| || ||||||||||||||||| || ||||||| ||| ||||| |||
Sbjct 1553 GCAACAATGCATAGGCACAGGCTTGAAAGTAATGAGAATCTTTACAAAGCTTTCCAGCAT 1612
Query 1648 TTTGACAAAGATGGGTGTGGATACATTACGATAGACGAGCTAGAGGCTGCTTTGAAGGAA 1707
||||||||||| | | ||||||||||| |||||||| || || |||| |||||||||
Sbjct 1613 TTTGACAAAGACAGCAGCGGATACATTACAATAGACGAACTGGAATCTGCATTGAAGGAA 1672
Query 1708 TATGGAATGGGAGATGATGCTACAATCAAAGAGATTTTGTCAGATGTCGACGCCGATAAT 1767
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 1673 TATGGAATGGGAGATGATGCAACAATCAAAGAGGTTTTGTCAGATGTCGACTCCGATAAC 1732
Query 1768 GACGGTAGAATTAACTATGAAGAGTTTTGTGCTATGATGAGAAGTGGGAATCCACAACAA 1827
|| |||||||| |||||||||||||| || || |||||||||||||| ||||||||||||
Sbjct 1733 GATGGTAGAATCAACTATGAAGAGTTCTGCGCAATGATGAGAAGTGGAAATCCACAACAA 1792
Query 1828 C 1828
|
Sbjct 1793 C 1793
> AT1G76040.2 | Symbols: CPK29 | calcium-dependent protein kinase
29 | chr1:28537673-28540637 FORWARD LENGTH=1945
Length=1945
Score = 381 bits (206), Expect = 1e-104
Identities = 751/1004 (75%), Gaps = 78/1004 (8%)
Strand=Plus/Plus
Query 642 TCA-GATCATGCAGCA-TTTGAGTGGACAACCTAACATTGTTGAGTATAAAGGAGCTTAT 699
||| |||| |||| || || | ||| ||||| ||||| || |||| | ||| || |||
Sbjct 552 TCATGATCTTGCAACACCTT-ACTGGTCAACCAAACATAGTCGAGTTTCGAGGCGCGTAT 610
Query 700 GAAGA-TGAGA-AAGCTGTGAATTTGGTTATGGAGCTTTGTGCTGGTGGTGA-ATTGTTT 756
||||| ||| || || | |||||||||||||||| ||| |||| || || || |||
Sbjct 611 GAAGACAAAGACAATCT-T-CATTTGGTTATGGAGCTCTGTTCTGGAGGAGAGCTT-TTT 667
Query 757 GATAGAATT-T-TAGCAAAGGGACA-TTACAGTGAGAGAGCAGCTGCTTCTGT-TTGTAG 812
||| | ||| | || ||| ||| | |||| ||||| || ||||||| | | || ||
Sbjct 668 GATCGTATTATCAAG-AAA-GGA-AGTTACTCTGAGAAAGAAGCTGCTAATATCTT-CAG 723
Query 813 ACAGATTGTTAATGTTG-TCAACATTTGTCATTTCATGGGTG-TGATGCATAGAGACTTA 870
|||||| |||||||||| || | ||||||| |||||||| | || | ||||||||||||
Sbjct 724 ACAGATCGTTAATGTTGTTC-ATGTTTGTCACTTCATGGGCGTTG-TTCATAGAGACTTA 781
Query 871 AAGCCTGAGAATTTCTTG-TTATCTAGCAAAGATGAGAAGGCTCTT-ATT-AAAGCCACT 927
|||||||||||||||||| || | ||| || || ||||| ||| | | ||||| ||
Sbjct 782 AAGCCTGAGAATTTCTTGCTTGT-TAGTAACGA--AGAAGATTCTCCAATCAAAGCAACA 838
Query 928 GATTTCGGATTATCGGTCTTT-ATTGAAGAAGGGAGAGTGTATAAAGGTATAGTTGGGAG 986
||||| ||| | || || ||| || |||||||| | |||||||| || ||||||||||||
Sbjct 839 GATTTTGGACTCTCTGT-TTTCATCGAAGAAGGTAAAGTGTATAGAGATATAGTTGGGAG 897
Query 987 TGCATATTATGTAGCTCCTGAAGTTTTGA-AGCGTAGA-TACGGTAAAGAAATCGATATA 1044
||||| || || || ||||||||| | | | || | | ||||| |||||||||||| ||
Sbjct 898 CGCATACTACGTTGCACCTGAAGTTCT-ACATCGAA-ACTACGGGAAAGAAATCGATGTA 955
Query 1045 TGGAGTGCTGGAATTATACTATACATTCTACTTAGCGGTGTGCCTCCGTTTTGGGCTGAA 1104
||||| || || |||| || |||||||| || || ||||| ||||| ||||||| ||
Sbjct 956 TGGAGCGCGGGTGTTATGCTTTACATTCTTCTCAGTGGTGTTCCTCCATTTTGGGGAGAG 1015
Query 1105 ACCGAGAA-AGGGATATTTGATGCTATATTGGAAGGTGAAATC-G-A-CTTTGAATCC-C 1159
|||||||| | |||||||| || || || ||||| ||| | | | ||| ||| | |
Sbjct 1016 ACCGAGAAGACT-ATATTTGAGGCGATCTTAGAAGG--AAAGCTGGATCTT-GAAACTTC 1071
Query 1160 AACCTTGGCCTTCAATTTCC-AATAGTGCTAAAGATTTGGTACGCA-GAATGTTGACACA 1217
||||||||| | || || || || || ||||||||| || | | || |||||| | |
Sbjct 1072 T-CCTTGGCCTACTATATCGGAA-AGCGCAAAAGATTTGATAAGAAAGA-TGTTGATA-A 1127
Query 1218 -AGATCCGAAAAGACGGATTTCTGCTGCTGAAGTTCTTCAGCATCCATGGCTAAGAGA-A 1275
|||||| |||| | |||| | || ||||||| ||| ||||||||||| | | ||| |
Sbjct 1128 GAGATCCTAAAAAAAGGATAACCGCAGCTGAAGCACTTGAGCATCCATGGATGACAGACA 1187
Query 1276 GGTGGAGAAGCATCAGATAAGCCTATTGATAGTGCTGTTCTC-TCAAGGATGAAGCAATT 1334
| || || ||||| || || ||||||||||||| | | |||||||||||||
Sbjct 1188 CCA--A-AATT-TCTGATAAACCAATCAATAGTGCTGTTCTTGTTA-GGATGAAGCAATT 1242
Query 1335 TAGAGCGATGAATAAACTAAAGAAACTTGCTTTAAAGGTCATTGCGGAGAACATTGACAC 1394
| |||||||| || || ||||||||||| || ||||| || ||||| ||| || | |
Sbjct 1243 CCGCGCGATGAACAAGCTCAAGAAACTTGCCTTGAAGGTGATAGCGGAAAAC-TT-AT-C 1299
Query 1395 GGAAGAA-A--TACAAGGCTTAAAGGCGAT-GTTTGCTAATATAGACACAGAC-AATAGT 1449
||||||| | || |||| |||||| | | |||| || || || ||||| || |||
Sbjct 1300 GGAAGAAGAGATAAAAGGATTAAAG-CAAACGTTTAAGAACATGGATACAGATGAA-AGT 1357
Query 1450 GGTACAATCACATATGAAGAACTGAAAGAA--GGATTAGC--CAAACTGGGATCAAAACT 1505
|| || ||||| | ||| ||||| || ||| || ||| | | || ||||| || ||
Sbjct 1358 GGCACCATCACTTTTGATGAACT-AA-GAAACGGGTTA-CATCGT-CTTGGATCTAAGCT 1413
Query 1506 CACTGAAG-CTGAAGTGAAACAGCTCATGGATGCTGCTGATGTTGATGGAAA-TGGGTCA 1563
|| || | ||||| | ||||| |||||||| ||||||||||| || ||| |||| |
Sbjct 1414 TACGGA-GTCTGAAATCAAACAACTCATGGAAGCTGCTGATGTGGACA-AAAGTGGGACG 1471
Query 1564 ATTGATTACATTGAGTTTATTACTGCAACAATGCATAGACATAG 1607
|||||||||||||||||| | ||||||||||||||| | |||||
Sbjct 1472 ATTGATTACATTGAGTTTGTAACTGCAACAATGCATCGTCATAG 1515
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95130032775
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5