BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474203 Length=1428 Score E Sequences producing significant alignments: (Bits) Value AT1G50710.1 | Symbols: | unknown protein; Has 109 Blast hits t... 2342 0.0 > AT1G50710.1 | Symbols: | unknown protein; Has 109 Blast hits to 109 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:18784509-18787802 REVERSE LENGTH=1669 Length=1669 Score = 2342 bits (1268), Expect = 0.0 Identities = 1379/1431 (96%), Gaps = 13/1431 (1%) Strand=Plus/Plus Query 1 GGTAGATCGAAGCAGATCTCTCGCCGG-AAACGTCACATTGAGGTATCTATCGATCGCCA 59 |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct 129 GGTAGATCGAAGCAGATCTCTCGCTGGAAAACGTCACATTGAGGTATCTATCG-CCGCCA 187 Query 60 ATGGTGAAGGCACTTCAAGGCACGGCTCAGAATCTGCCGGCGGATGTCAACCAATTGATC 119 |||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 188 ATGGTGAAGGCACTGCAAGGCGCGGCTCAGAATCTACCGGCGGATGTCAACCAATTGATC 247 Query 120 GATCAGTTAGAGCGTCACTGTTTGGCTCCCGATGGATCTCTTGTTACCAAATCTGCCTAC 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 248 GATCAGTTAGAGCGTCACTGTTTGGCTCCCGATGGATCTCTTGTTACCAAATCTGTCTAC 307 Query 180 TCCGATCTCCAACTCGCGAGAGAGGAGATGTCTCGGGAGAGACTTCGGTATTTGGAAGCT 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 308 TCCGATCTCCAACTCGCGAGAGAGGAGATGTCTCGGGAGAGACTTCGGTATTTGGAAGCT 367 Query 240 ATGGCTATTTATTGTGAAGCTGTAGCTATGGTAGAAGAATATCAGCAAGCTATTTCAGTG 299 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 368 ATGGCTATTTATTGTGAAGCTGTAGCTATGGTTGAAGAATATCAGCAAGCTATTTCAGTA 427 Query 300 GCTAACCATGGTGGAATTCGGGATGTTCAGGGTCTATACCCTCAACTTGGCTTGAAGAAT 359 ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 428 GCTAACCATGGGGGAATTCGTGATGTTCAAGGTCTATACCCTCAACTTGGCTTGAAGAAT 487 Query 360 TCTCCTCAGGTTTATGAGACTCTAGAGCATAGATTGGTGGTTGCTGAGGCGGCTCAGAAA 419 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 488 TCTCCTCAGGTTTATGAGACTCTAGAGCATAGGTTGGTGGTTGCTGAGGCGGCTCAGAAA 547 Query 420 CTGAGGCTGCCTCTAATTTCAGATGATGGTGAAATTCATGAGGAAGAAATTGAAAAGTGG 479 |||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 548 CTGAGGCTACCTCTTATTTCAGATGGTGGTGAAATTCATGAGGAAGAGATTGAAAAGTGG 607 Query 480 AGTATA-TTATCAAGAAGCTCTCTTGATAGTGCAAGCACGAGTTTTACGATTAGCTCCAC 538 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 608 AGTATACTT-TCAAGAAGCTCTCTTGATAGTGCAAGCACGAGTTTTACGATTAGCTCCAC 666 Query 539 TTCTAACTCTGTGAACTATGCGAATAGCTCTGCAAATAGTGTTGCTGGTGGGACTAGTCT 598 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 667 TTCTAACTCCGTGAACTATGCGAATAGCTCTGCAAATAGTGTTGCTGGTGGGATTAGTCT 726 Query 599 TAGTGCTGTTGATACTGACGTAGTTGGTGGTGTGCCGAATCGATTTCTTGGAATAACACC 658 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 727 TAGTGCTGTTGATACTGACGTAGTAGGTGGTGTTCCGAATCGATTTCTTGGAATAACACC 786 Query 659 TGCTTACTTATCCTATGTTCAGCTCCAAAATACTATTTCCATGGACATGGCTGACTACCA 718 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 787 TGCTTACTTATCCTATGTTCAGCTTCAAAATACTATTTCCATGGACATGGCTGACTACCA 846 Query 719 AATGTTTCTTGCACGTGAGATAGAAGGTCGATTGAAGGACAAATGTGATAAGTTGGCTGA 778 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 847 AATGTTTCTTGCCCGTGAGATAGAAGGTCGATTGAAGGAAAAATGTGATAAGTTGGCTGA 906 Query 779 TGCCATTGTTGACGACACTGATTCATCCACAGGAAATCGAAATTCAAGTGCTAGGCTCCC 838 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 907 TGCCATTGTTGATGACACTGATTCGTCCACAGGAAATCGAAATTCAAGTGCTAGGCTCCC 966 Query 839 AGAAAGGGTTAAGTTTATAATTGAGGAGATTGAAAGAGATGAAGCAGCTCTACGAGAGGA 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 967 AGAAAGGGTTAAGTTTATAATTGAGGAGATTGAAAGAGATGAAGCAGCTCTACGAGAGGA 1026 Query 899 CCTCTACTCGGCTGACAGGAAGTTTGCTGAATATTACAATGTCCTGGAACAAATACTCGG 958 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1027 CCTGTACTCGGCTGACAGGAAGTTTGCTGAATATTACAATGTCCTGGAACAAATACTCGG 1086 Query 959 GGTGCTTATTAAGCTTGTGAAAGATCTAAAGTTAGAACATCAACACAAATATAATGAGAT 1018 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1087 GGTACTTATAAAGCTTGTGAAGGATCTAAAGTTAGAACATCAACACAAATATAATGAGAT 1146 Query 1019 GCAGAAGACTTGGTTGTGTAAAAGGTGTGAGACCATGAATGCAAAATTAAGGGTTCTGGA 1078 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1147 GCAGAAGACTTGGTTGTGTAAAAGGTGTGAGACCATGAATGCAAAATTAAGGGTTTTGGA 1206 Query 1079 AAATGTTCTCCTCCTTGAGACATACACCCCTGACTCCATATCAGCTCTGCACAACATCAG 1138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1207 AAATGTTCTCCTCCTTGAGACATACACCCCTGACTCCATATCAGCTCTGCACAACATCAG 1266 Query 1139 GAATTATCTAGTCGAGGCTACCGAGGAAGCTTCAGCTGCATACAACAAAGCGGTTACACG 1198 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1267 GAATTATCTAGTCGAGGCTACCGAGGAAGCTTCAGCTGCATACAACAAAGCGGTTACTCG 1326 Query 1199 GCTTAGAGAATATCAAGGAGTGGATCCACATTTTGATACAATTGCCAGACAGTATCATGA 1258 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct 1327 GCTTAGAGAATATCAAGGAGTAGATCCGCATTTTGATACAATTGCCAGACAGTACCATGA 1386 Query 1259 CATTGTAAAGAAACTGGAAAATATGCAGTGGACCATTCATCAAGTAGAAATGGACCTCAA 1318 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1387 CATTGTTAAGAAACTGGAAAATATGCAGTGGACCATTCATCAAGTAGAAATGGACCTTAA 1446 Query 1319 GTCTCATGACTGATCACTAGATTTGTTAACACTTGTGAGTTGTGACATATGTATTAGCAA 1378 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| Sbjct 1447 GTCTCATGACTGATCACTAGATTTGTTAACACTTGTGA-T----A--TATGTATTAGCAA 1499 Query 1379 ATCTGATCCTCGAAGAAAAGATTGAACTGAGa-aaaaaaTCAGTATAATTT 1428 |||| |||||| |||||| |||||||||| || |||||||||||||||||| Sbjct 1500 ATCTAATCCTCCAAGAAA-GATTGAACTGGGAGAAAAAATCAGTATAATTT 1549 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70381164090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5