BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474258 Length=2213 Score E Sequences producing significant alignments: (Bits) Value AT1G51460.1 | Symbols: | ABC-2 type transporter family protein... 3531 0.0 > AT1G51460.1 | Symbols: | ABC-2 type transporter family protein | chr1:19076982-19081433 REVERSE LENGTH=2285 Length=2285 Score = 3531 bits (1912), Expect = 0.0 Identities = 2103/2195 (96%), Gaps = 13/2195 (1%) Strand=Plus/Plus Query 28 ATACATGTCTACGCCGGAAGAGGCAATGTATGTGGCGTGGGAAGATCTTACGGTGGTGAT 87 ||||||| |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| Sbjct 95 ATACATGACTACGCCGGAGGGGGCGATGTATGTGGCGTGGGAGGATCTTACGGTGGTGAT 154 Query 88 ACCAAACTTCGGTGAAGGAGCCACGAAGAGATTACTGAATGGAGTGAATGGTTGTGGTGA 147 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 155 ACCAAACTTCGGTGAAGGAGCAACTAAGAGATTACTGAATGGAGTGAATGGTTGTGGTGA 214 Query 148 GCCAAATAGGATCTTAGCTATTATGGGTCCTTCAGGTTCAGGCAAATCTACGCTTCTTGA 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 215 GCCAAATAGGATCTTAGCTATTATGGGTCCTTCAGGTTCAGGCAAATCTACGCTTCTTGA 274 Query 208 TGCTTTAGCAGGAAGATTGGCAGGGAATGTTGTAATGAGTGGCAAAGTTCTTGTCAATGG 267 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 275 TGCTTTAGCAGGAAGATTAGCAGGGAATGTTGTAATGAGTGGCAAAGTACTTGTCAATGG 334 Query 268 CAAGAAGAGAAAACTTGACTTTGGTGCTGCCGCTTATGTGACACAAGAAGATGTGTTGCT 327 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 335 CAAGAAGAGAAGACTTGACTTTGGTGCTGCCGCTTATGTGACGCAAGAAGATGTGTTGCT 394 Query 328 AGGAACTTTAACAGTGAGAGAATCCATATCTTACTCAGCTCATCTCAGGCTCCCTTCAAA 387 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 395 AGGAACTTTGACAGTGAGAGAATCCATATCTTACTCGGCTCATCTCAGGCTCCCTTCAAA 454 Query 388 GCTTACTAGAGAAGAGATCAGTGACATTGTGGAAGCTACAATTACTGACATGGGTCTTGA 447 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 455 GCTTACCAGAGAAGAGATCAGTGACATTGTGGAAGCTACAATCACTGACATGGGTCTTGA 514 Query 448 AGAATGTTCAGACAGGACCATTGGAAACTGGCATTTGCGTGGAATAAGCGGCGGAGAGAA 507 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 515 AGAATGTTCAGACAGGACCATTGGAAACTGGCATTTGCGTGGAATAAGCGGAGGAGAGAA 574 Query 508 GAAACGGCTTAGTATTGCGCTCGAGGTCTTAACCAAACCAAGTCTCCTCTTTCTAGACGA 567 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 575 GAAACGGCTTAGTATTGCCCTCGAGGTCTTAACAAAACCAAGTCTCCTCTTTCTAGACGA 634 Query 568 ACCAACCAGTGGATTGGACAGTGCTTCAGCTTTCTTTGTGGTTCAGATTCTTAGAAACAT 627 |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 635 ACCAACTAGTGGACTGGACAGTGCTTCAGCTTTCTTCGTGGTTCAGATTCTTAGAAACAT 694 Query 628 AGCAAGCAGTGGCAAAACTGTGGTTTCTTCAATTCATCAGCCGAGTGGTGAGGTTTTCGC 687 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 695 AGCAAGCAGTGGCAAAACTGTGGTTTCTTCGATCCATCAGCCGAGTGGTGAGGTTTTCGC 754 Query 688 CCTCTTTGATGACCTTCTACTGCTGTCTGGAGGAGAAACCGTTTACTTTGGCGAAGCAGA 747 ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 755 CCTCTTTGATGACCTGCTACTTCTGTCTGGAGGAGAAACTGTTTACTTTGGCGAAGCAGA 814 Query 748 ATCTGCAACAAAGTTCTTTGGTGAAGCGGGTTTTCCTTGTCCCAGCAGACGGAATCCATC 807 ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| Sbjct 815 ATCTGCAACAAAGTTCTTTGGTGAAGCAGGTTTTCCTTGTCCAAGTAGACGGAATCCATC 874 Query 808 TGACCACTTCCTTCGCTGTGTCAATTCAGATTTCGATAATGTCACAGCGGCTTTGGTTGA 867 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 875 AGACCACTTCCTTCGCTGTGTCAATTCCGATTTCGATAATGTCACAGCGGCTTTGGTTGA 934 Query 868 ATCTCGGCGAATCCAA-GATTCTTCTTTCTCTCATT-ATCAACTACATGAAACTTCAAAT 925 ||||||| |||| ||| ||||| |||||||||| || | ||||||||||||||| |||| Sbjct 935 ATCTCGGAGAAT-CAACGATTCATCTTTCTCTC-TTCACCAACTACATGAAACTACAAAC 992 Query 926 ACATTAGATCCTCTGGATGATATACCAACAGCAGAAATTAGAACAACACTTGTCAGAAAA 985 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 993 ACATTAGATCCTCTGGATGATATACCAACTGCAGAAATTAGAACAACACTTGTCAGAAAA 1052 Query 986 TTCAAGTGTTCGGTATATGCAGCAACTTCAAGAGCAAGAATTCAAGAAATAGCATCGATA 1045 || |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1053 TTTAAGTGTTCACTTTATGCAGCAGCTTCAAGAGCAAGAATTCAAGAAATAGCATCGATA 1112 Query 1046 GAGGGGCTTGTCACAGAAAGGAAAAAGGGGAGCCGAACAAATTGGTGGAAACAACTCAGA 1105 | |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 1113 GTGGGGATTGTCACAGAAAGGAAAAAGGGGAGCCAAACTAATTGGTGGAAACAACTCAGA 1172 Query 1106 ATACTTACTCAGCGATCTTTCATCAACATGAGTAGAGACGTGGGGTACTACTGGATGCGG 1165 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1173 ATACTTACTCAGCGATCTTTCATCAACATGAGTAGAGACTTGGGGTACTACTGGATGCGG 1232 Query 1166 ATTGCAGTCTACATAGTGTTATCCATTTGTGTCGGGTCAATCTTCTTCAACGTCGGGAGA 1225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1233 ATTGCAGTCTACATAGTGTTATCCATTTGTGTCGGGTCAATCTTCTTCAACGTCGGGAGA 1292 Query 1226 AACCACACAAATGTTATGAGTACTGCAGCTTGTGGCGGATTTATGGCAGGCTTTATGACA 1285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1293 AACCACACAAATGTTATGAGTACTGCAGCTTGTGGCGGATTTATGGCAGGCTTTATGACA 1352 Query 1286 TTCATGTCAATAGGAGGTTTCCAATCATTCATTGAAGAAATGAAGGTGTTTTCTCGGGAA 1345 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1353 TTCATGTCAATAGGAGGATTCCAATCCTTCATTGAAGAAATGAAGGTGTTTTCTCGCGAA 1412 Query 1346 AGGCTCAATGGACACTATGGGGTTGCAGTATATACTATGTCTAATTTACTCTCCTCATTA 1405 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 1413 AGGCTCAATGGACACTATGGGGTTGCAGTATACACTGTGTCTAATTTACTCTCCTCATTA 1472 Query 1406 CCTTTCATAATCCTTATGTGCCTCTCCACTAGCTCAATCACTATCTACATGGTGAAGTTC 1465 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct 1473 CCTTTCATAATCCTTATGTGCCTCTCCACCAGCTCAATCACTATCTACATGGTGAGGTTC 1532 Query 1466 CAATCTGGAGGTTCTCATTTCTTCTACAATTGTCTCGACCTCATCTGTGCGATTACAACT 1525 ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct 1533 CAATCCGGAGGTTCTCATTTCTTCTACAACTGTCTCGACCTTATCTGCGCGATTACAACT 1592 Query 1526 GTGGAGAGTTGCATGATGATGATAGCTTCAGTAGTCCCTAACTTCTTGATGGGAGTCATG 1585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1593 GTGGAGAGTTGCATGATGATGATAGCTTCAGTAGTCCCTAACTTCTTGATGGGAGTCATG 1652 Query 1586 TTGGGAGCTGGTTACATTGGAATTATGGTGTTAAGTGCGGGTTTTTTCCGATTCTTCCCC 1645 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1653 TTGGGAGCTGGTTACATTGGAATTATGGTGTTAAGTGCGGGGTTTTTCCGATTCTTCCCC 1712 Query 1646 GACTTACCTATGGTGTTCTGGCGATACCCGGTGTCCTACATAAACTACGGAGCATGGGCA 1705 |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1713 GACTTACCAATGGTGTTCTGGCGATACCCGGTGTCCTACATAAACTATGGTGCATGGGCA 1772 Query 1706 CTACAGGGAGCATTCAAGAATGAGATGATTGGGGTCGAGTATGATTCTCCGATACCTTTG 1765 ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||| Sbjct 1773 CTACAGGGAGCATACAAGAATGAGATGATTGGGGTGGAGTATGATTCTCCGTTACCCTTG 1832 Query 1766 GTACCAAAAATGAAAGGGGAACTCATTCTTCAAACTGTTTTAGGCATAAATCCAGAAAGA 1825 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1833 GTACCAAAAATGAAAGGAGAACTCATTCTTCAAACTGTTCTAGGCATAAATCCAGAAAGT 1892 Query 1826 TCAAAGTGGTTGGACCTAGCAGTTGTGATGATGATTCTCATTGGGTATAGAATTGCCTTC 1885 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1893 TCAAAGTGGTTGGATCTAGCAGTTGTGATGATGATTCTCATTGGGTATAGGATTGCCTTC 1952 Query 1886 TTCGCCACCCTCAAGTTCCGGGAAAAGGTTTTCCCAGTTATTCACATGTTATACACAAAG 1945 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1953 TTCGCCATCCTCAAGTTCCGGGAAAAGGTTTTCCCAGTTATTCACATGTTATACACAAAG 2012 Query 1946 AGAACTCTGAGCCATATCCAGAAAAGGCCTTCTTTCAGAAGAATGACACCTTTCCATTCC 2005 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2013 AGAACTCTGAGCCATATCCAGAAAAGGCCTTCTTTCAGAAGAATGACACCTTTCCCTTCC 2072 Query 2006 AGGCGATACCCTGTTCACCATGCTCTCTCTTCTCAGGAAGGACTTAACTCTCCACTGCAT 2065 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2073 AGGCGATACCCTGTTCACCATGCTCTCTCTTCTCAGGAAGGACTTAACTCTCCACTGCAT 2132 Query 2066 TAGACGCATATACAGCAGAATGCAATGTTACATATATTTCAATATGTCAGATGTTACTCT 2125 |||| ||||||||||||| ||||||| || |||||||||||||||||||||||| ||||| Sbjct 2133 TAGAAGCATATACAGCAGGATGCAAT-TTCCATATATTTCAATATGTCAGATGTCACTCT 2191 Query 2126 CTTCAAACTTGATAAACTGTTTGTAGCCTGTTGTGTAAG-aaaaaaaaaa-a---GAGA- 2179 |||||||||||||||||||||||||||| |||||||||| |||||||||| | |||| Sbjct 2192 CTTCAAACTTGATAAACTGTTTGTAGCCCGTTGTGTAAGGAAAAAAAAAAGAAAAGAGAG 2251 Query 2180 -TACTATTCATTCTGACTAATCAGATTTGTTTAGC 2213 |||||| ||||||||||||| ||||||||||||| Sbjct 2252 ATACTAT-CATTCTGACTAATGAGATTTGTTTAGC 2285 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 109788591915 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5