BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474322
Length=2186
Score E
Sequences producing significant alignments: (Bits) Value
AT1G52030.2 | Symbols: MBP2, MBP1.2, F-ATMBP | myrosinase-bindi... 1430 0.0
AT1G52040.1 | Symbols: MBP1, ATMBP | myrosinase-binding protein... 1389 0.0
AT1G52000.1 | Symbols: | Mannose-binding lectin superfamily pr... 514 1e-144
AT5G38540.1 | Symbols: | Mannose-binding lectin superfamily pr... 63.9 6e-09
> AT1G52030.2 | Symbols: MBP2, MBP1.2, F-ATMBP | myrosinase-binding
protein 2 | chr1:19345940-19348668 REVERSE LENGTH=2465
Length=2465
Score = 1430 bits (774), Expect = 0.0
Identities = 931/1008 (92%), Gaps = 6/1008 (1%)
Strand=Plus/Plus
Query 132 TCTCTCAGGT-TTTCTCTAAAATTAAAAGATAGAAAGAATGTCGGAAAAGGTGGGAGCGA 190
||| |||||| ||| ||| || |||||||||||||| |||||| ||||||||||||||||
Sbjct 350 TCTTTCAGGTATTT-TCTGAAGTTAAAAGATAGAAATAATGTCTGAAAAGGTGGGAGCGA 408
Query 191 TGGGTGGTAACAAGGGAGGAGCATTCGACGATGGTGTTTTTGATGGTGTGAAGAAAGTAA 250
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 409 TGGGTGGTAACAAGGGTGGAGCATTCGACGATGGTGTTTTTGATGGTGTGAAGAAAGTAA 468
Query 251 TAGTTGGAAAAGACTTCAGCAAGGTAACTTATATCAAGATCGAATACGAAAAGGACGGAA 310
| |||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||
Sbjct 469 TTGTTGGAAAAGACTTCAACAATGTAACTTATATCAAGGTTGAATACGAAAAGGACGGAA 528
Query 311 AATTCGAAATTCGTGAACACGGGACGAATCGCGGGGAACTAAAAGAGTTTTCAGTGGATT 370
||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||
Sbjct 529 AATTCGAAATTCGTGAACACGGGACTAATCGCGGGCAGCTAAAAGAGTTTTCAGTGGATT 588
Query 371 ATCCGAATGAATATATCATAGCCGTTGGTGGAAGCTACGATACTGTTTTCGGTTATGGAT 430
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||
Sbjct 589 ATCCGAATGAATATATCACAGCCGTTGGTGGAAGCTACGACACTGTTTTCGGTTACGGAT 648
Query 431 CAGAATTGATCAAATCATTACTCTTCAAAACCTCTTATGGAAGAACCTCTCCGATACTTG 490
||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 649 CAGCGTTGATCAAGTCATTACTCTTCAAAACCTCTTATGGAAGAACCTCTCCAATCCTTG 708
Query 491 GTCATACGACATTATTAGGGAATCCAGCTGGGAAAGAATTCATGCTAGAGGGCAAAAATG 550
|||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct 709 GTCACACGACATTACTAGGGAATCCAGCTGGGAAAGAATTCATGCTCGAGTCCAAATATG 768
Query 551 GAGGAAAGCTTCTTGGTTTCCATGGACGTTCTGGTGAAGCTCTTGATGCTATTGGACCTC 610
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 769 GAGGAAAGCTTCTTGGTTTCCATGGACGTTCTGGTGAAGCTCTTGATGCCATTGGACCTC 828
Query 611 ACTTCTTCGCTGTGAATTCTCCTCTCAAGCACTTTAAACTGCAAGGTGGGAATGGAGGGA 670
||||||| |||||||| ||| |||| ||||||||||||| ||||||||||||||||||||
Sbjct 829 ACTTCTTTGCTGTGAACTCTTCTCTTAAGCACTTTAAACCGCAAGGTGGGAATGGAGGGA 888
Query 671 GTGCTTGGGACGATGGTGCTTTTGATGGTGTTAGAAAAGTGCTCGTTGGACGAAATGGTA 730
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 889 GTGCTTGGGACGATGGTGCTTTTGATGGTGTTAGAAAAGTGCTTGTTGGGCGAAATGGTA 948
Query 731 AGTTTGTGAGTTATGTGAGGTTTGAGTATGCGAAAGGCGAAAGAATGGTACCACATGCTC 790
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 949 AGTTTGTGAGTTATGTCAGGTTTGAGTATGCGAAAGGAGAAAGAATGGTACCACATGCTC 1008
Query 791 ATGGGAAGAGACAAGAAGCTCCACAAGAGTTTGTGGTGGATTATCCTAATGAACATATTA 850
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1009 ATGGGAAGAGACAAGAAGCTCCACAAGAGTTTGTAGTGGATTATCCTAATGAACATATTA 1068
Query 851 CATCGGTCGAGGGAACAATCGATGGTTACCTTTCTTCGCTGACA-TTTAAGACATCAAAA 909
|||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||
Sbjct 1069 CATCGGTCGAGGGAACAATCGATGGTTACCTTTCGTCGCTGA-AGTTTACGACATCAAAA 1127
Query 910 GGAAGAGTCTCCCCTGCTTTTGGGAATGTGGTTGGTAATAAATTTGTGTTCGAAGAAACA 969
|||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 1128 GGAAGAACCTCCCCTGTTTTTGGGAATGTGGTCGGTAGTAAATTTGTGTTCGAAGAAACA 1187
Query 970 GGTTTTAAACTTGTTGGGTTTTGTGGTCGGTCTGGTGATGCTATTGATGCTCTTGGTGCA 1029
|||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct 1188 AGTTTTAAACTTGTTGGGTTTTGTGGTCGATCCGGTGAAGCTATTGATGCTCTTGGTGCA 1247
Query 1030 CATTTTGCCCCTCTTCCCGTTCCGgctccagctccagctccagctccagctccagctcca 1089
||||||||||||||||| | ||| |||||||||| || || || || || || ||||||
Sbjct 1248 CATTTTGCCCCTCTTCCTGCTCCCACTCCAGCTCCCGCGCCCGCGCCCGCGCCCGCTCCA 1307
Query 1090 gctcccgctccagctccagctccagat-catgctcctgttcctgctcc 1136
||||| ||||| | || ||||| | | | ||| || ||||| |||||
Sbjct 1308 GCTCCAGCTCCCTCGCCCGCTCCCGCTTC-TGCGCCCGTTCCAGCTCC 1354
Score = 1314 bits (711), Expect = 0.0
Identities = 897/985 (91%), Gaps = 19/985 (2%)
Strand=Plus/Plus
Query 1214 CTCCTCCCAACAAAGTGGAAGCTCAAGGAGGAAATGGTGGGGA-AACATTCGACGATGGT 1272
||||||| |||||||||||||||| ||||||||||||| || | || ||| |||||||||
Sbjct 1381 CTCCTCCTAACAAAGTGGAAGCTCTAGGAGGAAATGGT-GGAACAATATTTGACGATGGT 1439
Query 1273 GCTTTTGATCATGTAAGAAAGGTTTATGTTGGTCAAGGCGAGTCCGGTGTAACTTATGTC 1332
||||| ||||||||||||||||||||| |||||||||| || || |||||| |||||||
Sbjct 1440 GCTTTCGATCATGTAAGAAAGGTTTATATTGGTCAAGGTGATTCTGGTGTAGCTTATGTG 1499
Query 1333 AAATTCGAATACGA-AAAAGACAGGAAAAGTGAGACACGAGAGCATGGTAAAATGACATT 1391
|| ||||||||| | |||||| ||||||| |||||||| |||||||| ||||||||| |
Sbjct 1500 AAGTTCGAATAC-AGAAAAGATGGGAAAAGAGAGACACGGGAGCATGGAAAAATGACAGT 1558
Query 1392 GTTAGGAACAGAGGAGTTTGAGGTTGATTCAGATGATTACATCACATCAGTTCAAGTTTC 1451
||||||||||||||||||||||||||| || |||||||||||||||||| || |||||||
Sbjct 1559 GTTAGGAACAGAGGAGTTTGAGGTTGAGTCTGATGATTACATCACATCAATTGAAGTTTC 1618
Query 1452 TGTCGACAAAGTCTTTGGTTATAACAGCGAAATCGTCACTGCTCTTGTCTTCAAGACCTT 1511
||||||||| |||||||||| ||| || |||||||||||| |||||||||||||||||||
Sbjct 1619 TGTCGACAATGTCTTTGGTTTTAAGAGTGAAATCGTCACTTCTCTTGTCTTCAAGACCTT 1678
Query 1512 TAAGGGTAA-AACCTCACAGCCTTTTGGAATGGTGACTGAGAAGAAATTCGAACTTAAAG 1570
|||||| || ||||||||| ||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1679 TAAGGG-AATAACCTCACAACCTTTTGGAATGGAGACTGAGAAGAAATTGGAACTTAAAG 1737
Query 1571 ACGGTAAGGGAGGAAAACTTGCT-GGATTCCATGGGAAAGCTAGTGATGTTCTGTATGCT 1629
||||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct 1738 ACGGTAAAGGAGGAAAACTTG-TGGGATTCCATGGGAAAGCTAGTGATGTTCTTTATGCT 1796
Query 1630 CTTGGTGCTTATTTCGCTCCAACAACAACTTCGACTACTCCGTTGACACCTTCTAC-TGC 1688
||||| |||||||||||||||||||||| ||| ||||| || | ||| |||||||| | |
Sbjct 1797 CTTGGCGCTTATTTCGCTCCAACAACAAATTCAACTACGCCATCGACTCCTTCTACAT-C 1855
Query 1689 TAAGAAGCTACAAGCAAGAGGTGGTAATGGAGGAGCTTCTTGGGATGATGGTGTTTTTGA 1748
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1856 TAAGAAACTACAAGCAAGAGGTGGAAATGGAGGAGCTTCTTGGGATGATGGTGTTTTTGA 1915
Query 1749 TGGCGTTAGAAAGATACTTGTAGGTCAAGGAAACGATGGAGTAGCTTTTGTCACGTTTGA 1808
||| ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 1916 TGGTGTTAGAAAGATACTTGTAGGTCAAGGAAACGATGGTGTAGCTTTCGTTACGTTTGA 1975
Query 1809 GTACAACAAAGGCTCTCAAGCTATCATCGGTGATGGTCATGGGAAACAAACAGTACTTGG 1868
||||||||||||||||||||| ||| |||||||| |||||||||| |||||| |||||||
Sbjct 1976 GTACAACAAAGGCTCTCAAGCAATCCTCGGTGATCGTCATGGGAAGCAAACATTACTTGG 2035
Query 1869 AACTGAAACGTTTGAGCTTGATTATCCAAGTGAATACATCACTTCGGTGGAAGGTTACTA 1928
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2036 AACTGAAACGTTTGAGCTTGATTATCCAAGTGAGTACATCACTTCGGTAGAAGGTTACTA 2095
Query 1929 TGATAAAATCTTT-GGAGTTGAAGCTGAAGTGGTGACGAGTCTAACGTTCAAGACTAACA 1987
||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2096 TGACAAAAT-TTTCGGAGTTGAAGCTGAAGTGGTGACGAGTCTAACGTTCAAGACTAACA 2154
Query 1988 AGAGAACGTCTCAGCCGTTTGGTTTGACTGCTGGTGAACATTTCGAGCTGAAGGAGGATG 2047
|||||||||||||||||||||| |||||||||| |||||||||||||| || ||||| |
Sbjct 2155 AGAGAACGTCTCAGCCGTTTGGAATGACTGCTGGGGAACATTTCGAGCTTAACGAGGACG 2214
Query 2048 GTTACAAGATCGTCGGGTTCCATGGAAAAGCTGGTAATGTGGTTCATCAGATCGGAGTCC 2107
||||||||||||| ||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct 2215 GTTACAAGATCGTTGGGTTCCATGGCAAAGCTGGTGATTTGGTTCATCAGATCGGAGTCC 2274
Query 2108 ATGTCGTGCCCATTTTCACCAATTAGAGA-GT-TATT--A-TTTAGTTTCTCTGATGATA 2162
||| ||||||||||||||||||||| ||| || | || | ||| |||||||||||||
Sbjct 2275 ATGCCGTGCCCATTTTCACCAATTACAGATGTGTTTTCTAGTTTC-TTTCTCTGATGATT 2333
Query 2163 CCGT-AAATAAGGTCCATGGACCAT 2186
|||| ||||||||||||||||||||
Sbjct 2334 CCGTTAAATAAGGTCCATGGACCAT 2358
> AT1G52040.1 | Symbols: MBP1, ATMBP | myrosinase-binding protein
1 | chr1:19350375-19352782 REVERSE LENGTH=1681
Length=1681
Score = 1389 bits (752), Expect = 0.0
Identities = 934/1018 (92%), Gaps = 27/1018 (3%)
Strand=Plus/Plus
Query 1180 TATTTTGCACCCATCTCTTCCTCTTCTT-CCTTGACTCCTCCCAACAAAGTGGAAGCTCA 1238
||||||||||||||||||||||| ||| | | ||| ||||||||||||||||||||||
Sbjct 505 TATTTTGCACCCATCTCTTCCTC--CTTGAC-T-ACTACTCCCAACAAAGTGGAAGCTCA 560
Query 1239 AGGAGGAAATGGTGGGGAAACATTCGACGATGGTGCTTTTGATCATGTAAGAAAGGTTTA 1298
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 561 AGGAGGAAATGGTGGAGAAACATTCGACGATGGTGTTTTTGATCATGTAAGAAAGGTTTA 620
Query 1299 TGTTGGTCAAGGCGAGTCCGGTGTAACTTATGTCAAATTCGAATACGAAAAAGACAGGAA 1358
|||||||||||| |||||||||||| ||||||||||||||||||| || ||||| ||||
Sbjct 621 TGTTGGTCAAGGTGAGTCCGGTGTAGCTTATGTCAAATTCGAATATGAGAAAGATGGGAA 680
Query 1359 AAGTGAGACACGAGAGCATGGTAAAATGACATTGTTAGGAACAGAGGAGTTTGAGGTTGA 1418
||| || ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 681 AAGAGAAACAAGAGACCATGGGAAAATGACATTGTTAGGAACAGAGGAGTTTGAGGTTGA 740
Query 1419 TTCAGATGATTACATCACATCAGTTCAAGTTTCTGTCGACAAAGTCTTTGGTTATAACAG 1478
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 741 TTCAGATGATTACATCACATCAATTGAAGTTTCTGTCGACAAAGTCTTTGGTTATAACAG 800
Query 1479 CGAAATCGTCACTGCTCTTGTCTTCAAGACCT-TTAAGGGTAAAACCTCACAGCCTTTTG 1537
||||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||
Sbjct 801 CGAAATCGTCACTGCTCTTGTGTTCAAGA-CTAGTAAGGGTACAACCTCACCGCCTTTTG 859
Query 1538 GAATGGTGACTGAGAAGAAATTCGAACTTAAAGACGGTAAGGGAGGAAAACTTGCTGGAT 1597
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||
Sbjct 860 GAATGGTGACTGAGAAGAAATTCGAACTTAAAGATGGTAACGGAGGAAAACTTGCCGGAT 919
Query 1598 TCCATGGGAAAGCTAGTGATGTTCTGTATGCTCTTGGTGCTTATTTCGCTCCAACAACAA 1657
||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||
Sbjct 920 TCCATGGGAAAGCTAGTGATGTTCTTTATGCTCTTGGTGCCTATTTCGCTCCATCGACAA 979
Query 1658 CTTCGACTACTCCGTTGACACCTTCTACTGCTAAGAAGCTACAAGCAAGAGGTGGTAATG 1717
||||||||||| | || |||||| | ||||||||||||||||||||||||||||
Sbjct 980 CTTCGACTACT-C-----CA---TCTACTACCAAGAAGCTACAAGCAAGAGGTGGTAATG 1030
Query 1718 GAGGAGCTTCTTGGGATGATGGTGTTTTTGATGGCGTTAGAAAGATACTTGTAGGTCAAG 1777
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1031 GAGGAGCTTCTTGGGATGATGGTGTTTTTGATGGTGTTAGAAAGATACTTGTTGGTCAAG 1090
Query 1778 GAAACGATGGAGTAGCTTTTGTCACGTTTGAGTACAACAAAGGCTCTCAAGCTATCATCG 1837
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1091 GAAACGATGGTGTAGCTTTTGTCACGTTTGAGTACAACAAAGGCTCTCAAGCAATCCTCG 1150
Query 1838 GTGATGGTCATGGGAA-ACAAACAGTACTTGGAACTGAAACGTTTGAGCTTGATTATCCA 1896
|||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1151 GTGATGGTCATGGGAAGA-AAACATTACTTGGAACTGAAACGTTTGAGCTTGATTATCCA 1209
Query 1897 AGTGAATACATCACTTCGGTGGAAGGTTACTATGATAAAATCTTT-GGAGTTGAAGCTGA 1955
||||| ||||||||||| ||||||||||||||||||||||| ||| || |||||||||||
Sbjct 1210 AGTGAGTACATCACTTCAGTGGAAGGTTACTATGATAAAAT-TTTCGGTGTTGAAGCTGA 1268
Query 1956 AGTGGTGACGAGTCTAACGTTCAAGACTAACAAGAGAACGTCTCAGCCGTTTGGTTTGAC 2015
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 1269 AGTGGTGACGAGTCTAATGTTCAAGACTAACAAGAGAACGTCTCAGCCGTTTGGAATGAC 1328
Query 2016 TGCTGGTGAACATTTCGAGCTGAAGGAGGATGGTTACAAGATCGTCGGGTTCCATGGAAA 2075
|||||| |||||||||||||| || || || ||||||||| |||| ||||||||||||||
Sbjct 1329 TGCTGGGGAACATTTCGAGCTTAAAGAAGACGGTTACAAGGTCGTTGGGTTCCATGGAAA 1388
Query 2076 AGCTGGTAATGTGGTTCATCAGATCGGAGTCCATGTCGTGCCCATTTTCACCAATTAGAG 2135
||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 1389 AGCGGGTGATTTGGTTCATCAGATCGGAGTCCATATCGTGCCCATTTTCACCAATTACAG 1448
Query 2136 AGTTATTATTTAG-TTT----CT-CTGATGATACCGTAAA-TAAGGTCCATGGACCAT 2186
|||| ||||||| ||| || |||||||| ||||||| |||||||||||||||||
Sbjct 1449 AGTTGCTATTTAGGTTTTTTTCTTCTGATGATTCCGTAAAATAAGGTCCATGGACCAT 1506
> AT1G52000.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr1:19333159-19336115 REVERSE LENGTH=2451
Length=2451
Score = 514 bits (278), Expect = 1e-144
Identities = 423/492 (86%), Gaps = 14/492 (3%)
Strand=Plus/Plus
Query 1176 AGCTTATTTTGCACCCATCTCTTCCTCTTC-T--TCCTTGA---CTCCTCCCAACAAAGT 1229
||||||||| | || ||||| |||||||| | ||||||| ||||||||||||||||
Sbjct 1766 AGCTTATTTCGTTCCAATCTCATCCTCTTCTTCCTCCTTGACTCCTCCTCCCAACAAAGT 1825
Query 1230 GGAAGCTCAAGGAGGAAATGGTGGGGAAACATTCGACGATGGTGCTTTTGATCATGTAAG 1289
||||||||||||||| | ||| |||||||| |||||||||||||| |||||||||||
Sbjct 1826 TAAAGCTCAAGGAGGAAGTTATGGAGAAACATTTGACGATGGTGCTTTCGATCATGTAAG 1885
Query 1290 AAAGGTTTATGTTGGTCAAGGCGAGTCCGGTGTAACTTATGTCAAATTCGAATACGAAAA 1349
||||||||||||||||||||| || || |||||| |||||||||| ||||| || |||||
Sbjct 1886 AAAGGTTTATGTTGGTCAAGGTGATTCTGGTGTAGCTTATGTCAAGTTCGATTATGAAAA 1945
Query 1350 AGACAGG-AAAA-GTGAGACACGAGAGCATGGTAAAATGACATTGTTAGGAACAGAGGAG 1407
|||| || |||| | ||||||| ||| ||||| ||||||||||||| |||||||||||||
Sbjct 1946 AGAC-GGTAAAAAG-GAGACACAAGAACATGGAAAAATGACATTGTCAGGAACAGAGGAG 2003
Query 1408 TTTGAGGTTGATTCAGATGATTACATCACATCAGTTCAAGTTTCTGTCGACAAAGTCTTT 1467
||||||||||||||||| |||||||| |||||| | | |||| ||||||||||||||
Sbjct 2004 TTTGAGGTTGATTCAGACGATTACATAACATCAATGGAGGTTTATGTCGACAAAGTCTAC 2063
Query 1468 GGTTATAACAGCGAAATCGTCACTGCTCTTGTCTTCAAGACCTTTAAGGGTAAAACCTCA 1527
|||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||| ||
Sbjct 2064 GGTTATAAAAGCGAAATCGTCATTGCTCTTACCTTCAAGACCTTTAAGGGTGAAACTTCT 2123
Query 1528 C-AGCCTTTTGGAATGGTGACTGAGAAGAAAT-TCGAACTTAAAGACGGTAAGGGAGGAA 1585
| | | ||||||||| | ||||||||| |||| | ||| ||||||||||||| |||||||
Sbjct 2124 CCA-CGTTTTGGAATAGAGACTGAGAATAAATAT-GAAGTTAAAGACGGTAAAGGAGGAA 2181
Query 1586 AACTTGCTGGATTCCATGGGAAAGCTAGTGATGTTCTGTATGCTCTTGGTGCTTATTTCG 1645
|||||||||| |||||||| |||||||| |||||||| |||||| ||||||||||||||
Sbjct 2182 AACTTGCTGGTTTCCATGGAAAAGCTAGCGATGTTCTTTATGCTATTGGTGCTTATTTCA 2241
Query 1646 CTCCAACAACAA 1657
|||| || |||
Sbjct 2242 TTCCAGCAGCAA 2253
> AT5G38540.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr5:15426810-15428710 REVERSE LENGTH=1488
Length=1488
Score = 63.9 bits (34), Expect = 6e-09
Identities = 48/54 (89%), Gaps = 3/54 (6%)
Strand=Plus/Plus
Query 1691 AGAAGCTACAAGCA-AGAGGTGGTAATGGAGGAGCTTCTTGGGATGATGGTGTT 1743
|||| ||| ||||| | ||||||| ||||||||||||||||||||||||||||
Sbjct 1190 AGAAACTAAAAGCACA-AGGTGGT-GTGGAGGAGCTTCTTGGGATGATGGTGTT 1241
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108433177200
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5