BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474331 Length=954 Score E Sequences producing significant alignments: (Bits) Value AT1G52155.1 | Symbols: | unknown protein; Has 37 Blast hits to... 1375 0.0 > AT1G52155.1 | Symbols: | unknown protein; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:19417666-19419853 FORWARD LENGTH=1222 Length=1222 Score = 1375 bits (744), Expect = 0.0 Identities = 890/958 (93%), Gaps = 19/958 (2%) Strand=Plus/Plus Query 1 ATGTCTTTTGGTGTATATGTGACTGGTGTTCTGTTTCAGACAGCTTCATTTGTGTCTTTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 253 ATGTCTTTTGGTGTATATGTGACTGGTGTTCTGTTTCAGACAGCTTCATTTGTGTCTTTT 312 Query 61 TTACTCATCTCTCATGGTTATTGCATCACTTGTGAACGGCTCTCATTGACTGAACGCAGA 120 ||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct 313 TTACTTATCTCTCACGGTTATTGCATCACTTGTGAACGGCTCTCGTTGACCGAACGTAGA 372 Query 121 ACCACTGCTTCACTTGGTTGTGTTTTTTACTTGACGCTTGTTGGATACAGAGCTTCTGTT 180 || || ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| Sbjct 373 ACTACAGCTTCACTTGGTTGTGTCTTTTATTTGACTCTTGTTGGATACAGAGCTTCTGTT 432 Query 181 CCTTATTTTGCTGTGCTTCTGATACTTAACTACATGATCTCATTCTATGTTATATTCCAC 240 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 433 CCTTATTTTGCAGTGCTTCTGATACTTAACTACATGATCTCATTCTATGTTATATTCCAT 492 Query 241 CACATATCGCAAAACCTAGCGGTCTTACGAGAACAGCTAAGTTTTATCGAGGATGAGAAT 300 |||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||| Sbjct 493 CACATATCGCAAAATCTAGCGGTGTTACGAGAACAGCTGAGTTTTATCGAAGATGAGAAT 552 Query 301 GTTCAAGCTATGCATGATGCTGTCTATGCTAAATATATTATGTTCAAAAAATTCCAAGGA 360 ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct 553 GTTCAAGCTATGCATGATGCTGTATATGCTAAATACATCATGTTCAAAAAATTCCAAGGA 612 Query 361 GCTATGCAGATTGTAGCAATGGCAGAAACTGTGATTTATATGAACATGGATAACTCCTCG 420 ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 613 GCTATGCAGATTGTAGCAATGGCAGAAACTGTGATCTACATGAACATGGATAACTCCTCA 672 Query 421 CAGAACTATTGGCTCCGGCTACTAATTCGAGAATGGGCTCAGTTCTGCATTTTTCTCTAT 480 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 673 CAAAACTATTGGCTCAGGCTACTAATTCGAGAATGGGCTCAGTTCTGCATTTTTCTCTAT 732 Query 481 ATTGGTTGGACTTTCAGGTCTCAGGACATGGCACCGCGTTTCTCGGTAATGCCTACACTA 540 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 733 ATTGGTTGGACTTTCAGGTCTCAGGATATGGCACCGCGTTTCTCGGTAATGCCTACACTA 792 Query 541 AAACCTAAAGAGAATACAGTTATTCCTCCGATTTATAGCATGGACATGGACGCAAAATCT 600 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 793 AAACCGAAAGAGAATACAATTATTCCTCCGATTTATAGCATGGAAATGGACGCAAAATCT 852 Query 601 TTCAAAGAATTCAGAAGTCAAGAATGGAACATCGGAGTGCCAATGCCATATTCAAACTAC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 853 TTCAAAGAATTCAGAAGTCAAGAATGGAACATCGGAGTGCCAATGCCATATTCAAACTAC 912 Query 661 GAAAAGCAAAAAGATTCAGTTCTAGTGATAATTCAGCATCCGCGATAGCATTCAGAGAGA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 913 GAAAAGCAAAAAGATTCAGTTCTAGTGATAATTCAGCATCCGCGATAGCATTTAGAGAGA 972 Query 721 CGCGGAAA-ATACAACGCTT-CCTCTTTCCATCTTCCTATTTAGAGTGAAAGATCACCAA 778 || ||| |||||| | || ||||| |||||||||||| |||||||||||||||||| Sbjct 973 AGCA-AAAGATACAATGTTTTCCTCTATCCATCTTCCTAAAGAGAGTGAAAGATCACCAA 1031 Query 779 AAACGACTAAGCGTCTCTCCGATTAAGACAAGATGCTTCCTCAGCAACTACTTTGTCCCT 838 || ||| ||| |||||| ||||||||||||||||||||||||||||||| || || || Sbjct 1032 AATTGACAAAGTTTCTCTCTGATTAAGACAAGATGCTTCCTCAGCAACTACCTT-TCTCT 1090 Query 839 CTTTCC-TTTGG-TTTTGCGGGTTTCTTATCTTATAGAGGAATAAAAGTTGATTTTAATG 896 |||||| ||| ||||| |||||||||||||||||||||||||||| || | | Sbjct 1091 CTTTCCATTTACATTTTG-GGGTTTCTTATCTTATAGAGGAATAAAA-TT--T------G 1140 Query 897 TATAGATGCAAAAATTAGTTCTAGTATAAATATGCTTCAAATGAAAATGTACACACAA 954 |||||||||||||| |||||||||||||| | |||||||||||||||||| |||||| Sbjct 1141 TATAGATGCAAAAACTAGTTCTAGTATAA-T--GCTTCAAATGAAAATGTAAACACAA 1195 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46667522563 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5