BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474332
Length=2722
Score E
Sequences producing significant alignments: (Bits) Value
AT1G52160.1 | Symbols: TRZ3 | tRNAse Z3 | chr1:19420715-1942443... 3984 0.0
AT3G16260.1 | Symbols: TRZ4 | tRNAse Z4 | chr3:5509374-5513204 ... 1391 0.0
> AT1G52160.1 | Symbols: TRZ3 | tRNAse Z3 | chr1:19420715-19424439
REVERSE LENGTH=2889
Length=2889
Score = 3984 bits (2157), Expect = 0.0
Identities = 2508/2675 (94%), Gaps = 34/2675 (1%)
Strand=Plus/Plus
Query 1 CTCCAGAGAGG-CAGAGATGATAAACTCAATGCCCTATTTACACAAAAACCTACGccttc 59
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5 CTCCAGAG-GGAGAGAGATGATAAACTCAATGCCCTATTTACACAAAAACCTACGCCTTC 63
Query 60 ttcttctcctctcttcaaagtcttcttctttccctctttctctcagacccttttctccac 119
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 64 TTCGTCTCCTCTCTTCAAAGTCTTCTCCTTTCCCTCTTTCTCTCAGACCCTTTTCTCCAC 123
Query 120 gatccttctctctctcaaccctc-t-tc-tcttcttcatc--c-tcttcaATGGAGAACA 173
||||||||||||||||||||||| | || ||||||||||| | ||||||||||||||||
Sbjct 124 GATCCTTCTCTCTCTCAACCCTCTTCTCTTCTTCTTCATCATCGTCTTCAATGGAGAACA 183
Query 174 ACGAATCTACTAATGG-TACCAAGTCTTCTTCT--TTC-GTC-T-TT-AATAAGCGAAGA 226
||||| | |||||||| | |||||||||||||| ||| || | || ||||||||||||
Sbjct 184 ACGAAGCAACTAATGGCT-CCAAGTCTTCTTCTAATTCATTCGTGTTCAATAAGCGAAGA 242
Query 227 GCTGAAGGAATTGATAAAACCGATAAGaaaaaaaGAAATCTTGAACGCAAAACCCAAAAG 286
||||||||| |||| | |||||||||||||||||| ||||| ||||||||| ||||||||
Sbjct 243 GCTGAAGGATTTGACATAACCGATAAGAAAAAAAGGAATCTAGAACGCAAATCCCAAAAG 302
Query 287 CTTAATCCCTCTAACACTATTGCTTACGCACAGATTCTTGGAACGGGAATGGATACTCAG 346
||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| |||
Sbjct 303 CTTAATCCCACTAACACTATTGCTTACGCACAGATACTTGGAACTGGAATGGATACACAG 362
Query 347 GATACATCATCTTCTGTATTACTCTTCTTTGACAAACAAAGATTCATTTTTAATGCTGGA 406
|||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 363 GATACATCATCTTCTGTATTACTCTTCTTTGATAAGCAAAGATTCATCTTTAATGCTGGA 422
Query 407 GAGGGCTTGCAACGTTTTTGTACAGAGCATAAGATTAAACTATCAAAGATAGATCATGTG 466
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 423 GAGGGCTTGCAACGTTTTTGTACAGAACATAAGATTAAACTATCAAAGATAGATCATGTA 482
Query 467 TTTTTGTCTCGTGTCTGCTCAGAGACAGCAGGAGGACTTCCAGGTCTTTTACTAACTCTT 526
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 483 TTTTTGTCTCGTGTTTGCTCAGAGACAGCAGGAGGACTTCCAGGTCTTCTACTAACTCTA 542
Query 527 GCTGGTATTGGTGAAGAAGGGCTTTCGGTGAATGTATGGGGTCCTTCGGATCTTAACTAT 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 GCTGGTATTGGTGAAGAAGGGCTTTCGGTGAATGTATGGGGTCCTTCGGATCTTAACTAT 602
Query 587 TTAGTTGATGCAATGAAGTCGTTTATTCCACGGGCGGCTATGGTTCATACTCGGAGTTTT 646
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 603 TTAGTTGATGCAATGAAGTCGTTTATTCCACGGGCAGCTATGGTTCATACACGGAGTTTT 662
Query 647 GGTCCCTCGAGTACACCTGATCCTATTGTTCTTGTGAACGATGAAATTGTGAAAATATCC 706
|||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 663 GGTCCCTCGAGTACTCCTGATCCTATTGTTCTTGTGAATGATGAAGTTGTGAAAATATCC 722
Query 707 GCGATTATCTTGAAACCGTGTCACTCTGAGGAAGACTCTGGCAACAAATCTGGCGAGCTC 766
|| |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 723 GCCATTATCTTAAAACCGTGTCATTCTGAGGAAGACTCTGGCAACAAATCTGGCGATCTC 782
Query 767 TCAGTTGTATATGTATGTGAATTACCTGAAATTTTGGGAAAATTTGACTTAGAGAAGGCA 826
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 783 TCAGTTGTATATGTATGTGAATTACCTGAAATATTGGGAAAATTTGACTTAGAGAAGGCT 842
Query 827 AAGAAGATTTTTGGTGTTAAGCCTGGTCCAAAATATAGTAAACTTCAGTCCGGCGAATCA 886
|||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 843 AAGAAGGTTTTTGGTGTTAAGCCTGGTCCAAAATATAGTAGACTTCAGTCCGGTGAATCA 902
Query 887 GTGAAGTCGGATGAAAGAGATATTACGGTTTATCCAAGTGATGTTATGGGACCTTCACTT 946
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 903 GTGAAGTCAGATGAAAGAGATATTACGGTTCATCCAAGTGATGTTATGGGACCTTCACTC 962
Query 947 CCTGGTCCCATTGTTCTCCTTGTGGACTGTCCAACTGAGTCGCACGCTGCAGAACTGTTC 1006
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 963 CCTGGTCCCATTGTTCTCCTTGTGGACTGTCCAACAGAGTCGCACGCTGCAGAACTGTTC 1022
Query 1007 TCAGTTAAGTCTTTGGATAGTTATTATTCATGTACTGATGATCAAACCGA-TGGACCGAA 1065
||| ||||||||||||| ||||||||||||| | |||| || |||||| | |||| | ||
Sbjct 1023 TCACTTAAGTCTTTGGAGAGTTATTATTCATCTCCTGACGAGCAAACC-ATTGGAGCAAA 1081
Query 1066 GTTTGTAAATTGTATTATACATTTGAGTCCATTTTCTGTGACAAGTAGTCCTACTTACCA 1125
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1082 GTTTGTAAATTGTATTATACATTTGAGCCCATCTTCTGTGACAAGTAGTCCTACTTACCA 1141
Query 1126 AAGCTGGATGAATAAATTTCATTCT-AGTCAACATATTCTTGCTGGACATCAAAGGAAGA 1184
|||||||||||| || ||||||| | | |||||| ||||||||||| |||||||||||||
Sbjct 1142 AAGCTGGATGAAGAAGTTTCATT-TGACTCAACACATTCTTGCTGGCCATCAAAGGAAGA 1200
Query 1185 ATATGGCTTTCCCAATTCTGAAAGCAAGTTCAAGAATCGCTGCCAGACTTAACTATTTGT 1244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1201 ATATGGCTTTCCCAATTCTGAAAGCAAGTTCAAGAATCGCTGCCAGACTTAACTATCTAT 1260
Query 1245 GCCCGCAGTTCTTTCCTGCTCCTGGATTTTGG-C--CTCAACTTGCTGATATGTCGATGA 1301
|||||||||||||||||||||||||||||||| | |||||||| | |||| ||||| |
Sbjct 1261 GCCCGCAGTTCTTTCCTGCTCCTGGATTTTGGCCTTCTCAACTTACCGATAACTCGATTA 1320
Query 1302 TAGATTCCACTCCTTGGAACAAGTGCTCAAGTTCAAACCTTGCTGAAAGCATTTCTGCTG 1361
| ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1321 TTGATCCCACTCCTTCGAACAAGTGCTCAAGTTCAAATCTTGCTGAAAGCATTTCTGCTG 1380
Query 1362 AAAATCTCCTCAAGTTCAATTTGCGTCCCGTGGCTATTCGTGGGATAGAAAGATCTTGTA 1421
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||
Sbjct 1381 AAAATCTCCTCAAGTTCAATTTGCGTCCCGTGGCTATTCGTGGGATCGACAGATCGTGTA 1440
Query 1422 TCCCTGCTCAATTGACATCCTCAGAAGTATTGGATGAGCTA-TTTGATGAAATTCCGGAG 1480
||||||||| | | ||||||||||||||| ||||||||||| ||| |||||||||||||
Sbjct 1441 TCCCTGCTCCACTAACATCCTCAGAAGTAGTGGATGAGCTACTTT-CTGAAATTCCGGAG 1499
Query 1481 ATTAAAGATAAAAGCGAAGAAATCAAGCAGTTCTGGAATAAACAACACAACAAGACGATC 1540
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1500 ATAAAAGATAAAAGTGAAGAAATCAAGCAGTTCTGGAATAAACAACACAACAAGACAATC 1559
Query 1541 ATCGAAAAGCTATGGCTGACTGAGAGCAATACTGTTCTTCCTAGCTGTCTTGAAAACATT 1600
|||||||||||||||||| ||||| |||||||||||||||| | |||||||||||| |||
Sbjct 1560 ATCGAAAAGCTATGGCTGTCTGAGTGCAATACTGTTCTTCCAAACTGTCTTGAAAAGATT 1619
Query 1601 AGACGAGATGACATGGAGATTGTTATTTTAGGCACTGGTTCGTCTCAGCCTTCAAAATAC 1660
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1620 AGACGAGATGACATGGAGATTGTTATTCTAGGCACTGGTTCGTCTCAGCCTTCAAAATAC 1679
Query 1661 CGAAATGTCAGTGCAATTTATATTGACCTATTCTCTAGAGGTAGTCTTCTCCTAGATTGT 1720
||||| || |||||||||| ||||||| | ||||||||||||||||||||||||||||||
Sbjct 1680 CGAAACGTTAGTGCAATTTTTATTGACTTGTTCTCTAGAGGTAGTCTTCTCCTAGATTGT 1739
Query 1721 GGTGAAGGAACCTTGGGCCAGCTTAAAAGAAGATATGGTTTAGACGGTGCAGATGAGGCG 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 GGTGAAGGAACCTTGGGCCAGCTTAAAAGAAGATATGGTTTAGACGGTGCAGATGAGGCG 1799
Query 1781 GTTAGAAAGTTGAGATGTATATGGATCTCTCACATCCACGCCGATCACCATACAGGTCTT 1840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1800 GTTAGAAAGTTGAGATGTATATGGATCTCTCACATCCACGCTGATCACCATACAGGTCTT 1859
Query 1841 GCGAGGATTCTAGCTCTTAG-AGGCAAGCTTTTGAAAGGAGTGACTCACGAGCCAGTGAT 1899
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1860 GCGAGGATTCTAGCTCTTAGGAG-CAAGCTTTTGAAAGGAGTGACTCACGAGCCAGTGAT 1918
Query 1900 TGTGGTGGGACCGAGGCCGCTTAAACGCTTTCTCGATGCATATCAAAGACTTGAGGATTT 1959
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1919 TGTGGTGGGGCCGAGGCCGCTTAAACGCTTTCTTGATGCATATCAAAGACTTGAGGATTT 1978
Query 1960 AGATATGGAATTTCTAGATTGTAGAAGCACCACAACAACTTCTTGGGCTTCTTTAGAAAG 2019
||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 1979 AGATATGGAGTTTCTTGATTGTAGAAGCACCACAGCAACTTCTTGGGCTTCTTTAGAGAG 2038
Query 2020 CGGCGGCGGCGATGCAGAGGGATCTTTGTTTAGTGAAGGAAGTCCTATGCAGAGTGTCTT 2079
|| || | ||| || ||||| |||||||||| | |||||||||||||||||||||||||
Sbjct 2039 TGG-GG-G-CGAAGCTGAGGGTTCTTTGTTTACTCAAGGAAGTCCTATGCAGAGTGTCTT 2095
Query 2080 TAAAAGATCTGATATCCCGGCGGATAATTCTTCGGTTTTGCTGTGTTTAAAGAATCTGAA 2139
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 2096 CAAAAGATCTGATATCTCGATGGATAATTCTTCGGTTTTGCTGTGTTTAAAGAATCTGAA 2155
Query 2140 GAAGGTTCTTAGCGAAATCGGATTGGATGATTTGATTAGTTTTCCTGTTGTACATTGTCC 2199
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 2156 GAAGGTTCTTAGCGAAATTGGATTGAATGATTTGATTAGTTTTCCTGTTGTACATTGTCC 2215
Query 2200 TCAAGCCTATGGTGTCGTTATAAAAGCAGCTGAAAGAGTAAATAGTGTTGGAGAACAAAT 2259
|||||| |||||||| ||||| || |||||||||||||||||||||||||||||||||||
Sbjct 2216 TCAAGCGTATGGTGTTGTTATCAAGGCAGCTGAAAGAGTAAATAGTGTTGGAGAACAAAT 2275
Query 2260 CCCGGGATGGAAAATGGTTTATTCAGGCGACACAAGACCTTGTCCC-GAGATCGTT-GAA 2317
|| |||||||||||||||||||| |||||| |||||||||| ||| |||| || | |||
Sbjct 2276 CCTTGGATGGAAAATGGTTTATTCGGGCGACTCAAGACCTTG-CCCTGAGA-CGGTCGAA 2333
Query 2318 GCATCACGAGATGCAACAGTTCTTATACATGAGGCTACGTTTGAAGATGCATTGATAGAA 2377
|||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct 2334 GCATCACGAGATGCAACAATTCTTATACATGAGGCAACGTTTGAAGATGCGTTGATAGAA 2393
Query 2378 GAAGCTTTGGCGAAGAATCACAGCACGACTAAAGAAGCAATCGATGTGGGATCTTCTGCA 2437
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2394 GAAGCTTTGGCGAAGAATCACAGCACGACTAAAGAAGCAATCGATGTGGGATCTGCGGCG 2453
Query 2438 AATGCGTATCGGATTGTTCTCACGCATTTTAGCCAGCGATATCCGAAGATTCCGGTGATT 2497
|||| |||||||||||||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct 2454 AATGTGTATCGGATTGTTCTCACACATTTTAGCCAGAGATATCCGAAGATTCCAGTGATT 2513
Query 2498 GATGAGTCGCATATGCATAATACCTGCATTGCCTTTGATCTGATGAGTATAAACATGGCG 2557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2514 GATGAGTCGCATATGCATAATACCTGCATTGCCTTTGATCTGATGAGTATAAACATGGCG 2573
Query 2558 GATTTGCAAGTGCTTCCTAAGGTCTTACCGTATTTCAAAACTCTCTTCAGAGATGAGATG 2617
|||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct 2574 GATTTGCATGTGCTTCCTAAGGTTTTGCCGTATTTCAAAACTCTTTTCAGAGATGAGATG 2633
Query 2618 GTTGAAGATGAGGATGCAGATGGTGTTGCCATGGA 2652
|||||||||||||||||||||| ||||||||||||
Sbjct 2634 GTTGAAGATGAGGATGCAGATGATGTTGCCATGGA 2668
> AT3G16260.1 | Symbols: TRZ4 | tRNAse Z4 | chr3:5509374-5513204
FORWARD LENGTH=2938
Length=2938
Score = 1391 bits (753), Expect = 0.0
Identities = 1618/2023 (80%), Gaps = 110/2023 (5%)
Strand=Plus/Plus
Query 664 TGAT-CCTATTGTTCTTGTGAACGATGAAATTGTGAAAATATCCGCGATTAT-CTTGAAA 721
|||| |||| |||||||||| | || ||| |||||||||||||||| ||| | || | ||
Sbjct 806 TGATGCCTA-TGTTCTTGTGGATGACGAAGTTGTGAAAATATCCGCCATTCTCCTAG-AA 863
Query 722 CCGTGTCACTCTGAGGAAGACTCTGGCAACAAATCTGGCG-AGCTCTCAGTTGTATATGT 780
|| ||| || | | || || ||||||| |||| |||| | | | ||||| |||||||
Sbjct 864 CCAAGTCGCT-T-A-GAGGAATCTGGCAGCAAACCTGGTGAAAC-AGCAGTTATATATGT 919
Query 781 ATGTGAATTACCTGAAATTTTGGGAAAATTTGACT-TAGAGAAGGCAAAGAAGATTTTTG 839
|||||||||||||||||| ||||| ||||| | | ||||||| | | | | |||
Sbjct 920 ATGTGAATTACCTGAAATCAAAGGAAAGTTTGA-TCCAAAGAAGGCCATG--G-CTCTTG 975
Query 840 GTGTT-A-AGCCTGGTCCAAAATATAGTAAACTTCAGTCCGG-CGAATCAGTGAAGTCGG 896
| || | || |||||||||| || ||| | |||||||| || | | ||||| ||||| |
Sbjct 976 G-ATTGAGAG-CTGGTCCAAAGTACAGTTATCTTCAGTCTGGAC-AGTCAGTCAAGTCAG 1032
Query 897 A-TGAAAGAGATATTACGGTTTATCCAAGTGATGTTATGGGACCTTCACTTCCTGGTCCC 955
| | || ||||||||||||| |||| |||||||| |||||||||||| ||||||||||
Sbjct 1033 ATTTTAA-AGATATTACGGTTCATCCGAGTGATGTGATGGGACCTTCAGTTCCTGGTCCT 1091
Query 956 ATTGTTCTCCTTGTGGACTGTCCAACTGAGTCGCACGCTGCA-GAACTG-T-TCTCAGTT 1012
||||| | |||||||| |||||||| ||||| || || | | |||||| | ||| | |
Sbjct 1092 GTTGTTTTGCTTGTGGATTGTCCAACAGAGTCACATGCCG-AGGAACTGCTATCT-A-TC 1148
Query 1013 AAGTCTTTGGATAGTTATTATTCATGTAC-TGATGA-TCAAACCGATGGACCGAAGTTTG 1070
|||| || | | ||||||||||||| | ||| | || ||| |||||| | ||| |||
Sbjct 1149 CCGTCTATGAAGACTTATTATTCATGT-CTTGACAATTC-AACAGATGGAGCTAAGCTTG 1206
Query 1071 TAAATTGTATTATACATTTGAGTCCATTTTCTGTGACAAGTAGTCCTACTTACCAAAGCT 1130
| ||||||||||| ||| | |||||| |||||| |||| |||| |||| |||| |||||
Sbjct 1207 TTAATTGTATTATTCATCTAAGTCCAGCTTCTGTAACAAATAGTTCTACATACCGAAGCT 1266
Query 1131 GGATGAATAAATTTCATTCTAG-TCAACATATTCTTGCTGGACATCAAAG-GAAGAATAT 1188
||||||| | ||| |||||| | || || ||||| ||||||||| ||| |||||||||
Sbjct 1267 GGATGAAGAGATTCCATTCT-GCCCAGCACATTCTCGCTGGACAT-GAAGCGAAGAATAT 1324
Query 1189 GG-CTTTCCCAATTCTGAAAGCAAGTTCAAGAATCGCTGCCAGACTTAACTATTTGTGCC 1247
|| ||| ||||| |||| ||| ||||| |||||| | ||||||||||||||||| || |
Sbjct 1325 GGAGTTT-CCAATCCTGAGAGCCAGTTCTAGAATCACAGCCAGACTTAACTATTTATGTC 1383
Query 1248 CGCAGTTCTTTCCTGCTCCTGGATTTTGG-C-C-TCAACTTGCTGATATGTCGATGATAG 1304
| |||||||| || ||||||||||||||| | | ||||| || | ||| ||||| | |
Sbjct 1384 CACAGTTCTTCCCAGCTCCTGGATTTTGGTCTCATCAACATGATAATAACTCGAT-A-A- 1440
Query 1305 ATTCCACTCCTTGGAACAAGTGC-TCAAGTTCAAACCTTGCTGAAAGCATTTCTGCTGAA 1363
| ||||| ||| || ||||||| || | ||| || |||| |||||||||||||||||||
Sbjct 1441 ACCCCACTTCTTTGAGCAAGTGCTTCGA-TTCGAATCTTGGTGAAAGCATTTCTGCTGAA 1499
Query 1364 AATCTCCTCAAGTTCAATTTGCGTCC-CGTGGCTATTCGTGGGATAGAAAGATCTTGTAT 1422
|||||||||||||||| ||||||||| | ||| || || |||| |||| |||||| ||||
Sbjct 1500 AATCTCCTCAAGTTCACTTTGCGTCCACATGG-TAATCTTGGGGTAGACAGATCTAGTAT 1558
Query 1423 CCCT-GCTCAATTGACATCCTCA-GAAGT-ATTGGATGAGC-TATTTGATGAAATTCCGG 1478
|||| | || ||| ||| | | | | ||| | ||||||||| | ||| | |||||||| |
Sbjct 1559 CCCTAG-TCGATTAACAGCTTTACG-AGTGA-TGGATGAGCTTCTTTCA-GAAATTCCTG 1614
Query 1479 AGATTA-AAGATAAAAGCGAAGAAATCAAGCAGTTCTGGAATAAACAACACAACAAGACG 1537
| || | || ||| | |||||||||||||||||| |||||| |||||||||||||| |
Sbjct 1615 AAATCAGCAG-TAAGACCGAAGAAATCAAGCAGTTATGGAATGGACAACACAACAAGATG 1673
Query 1538 ATCATCGAAAAGCTATGGCTGACTGAGAGCAATACTGTTCTTCCTAGCTGTCTTGAAAAC 1597
|| |||||| ||| ||||||| ||| ||| |||| |||| |||||||||||||||
Sbjct 1674 ATGATCGAAGAGCCATGGCTGGGTGAAAGC---ACTG---TTCCAAGCTGTCTTGAAAAC 1727
Query 1598 ATTAGACGAGATGACATGGAGATTGTTATTTTAGGCACTGGTTCGTCTCAGCCTTCAAAA 1657
|||||| |||| ||||||||||| ||| |||| ||||||||||| || || || ||||||
Sbjct 1728 ATTAGAAGAGACGACATGGAGATAGTTCTTTTGGGCACTGGTTCCTCCCAACCCTCAAAA 1787
Query 1658 TACCGAAATGTCA-GTGCAATTTATATTGACCTATTCTCTAGAGGTAGTCTTCTCCTAGA 1716
||||||||||||| | |||||||| || ||||||||||||||||| ||| ||||| | ||
Sbjct 1788 TACCGAAATGTCACG-GCAATTTACATCGACCTATTCTCTAGAGGCAGTATTCTCTTGGA 1846
Query 1717 TTGTGGTGAAGGAACCTTGGGCCAGCTTAAAAGAAGATATGGTTTAGACGGTGCAGATGA 1776
|||||| ||||| ||||| |||||||||||| |||||||||||||||| || || |||||
Sbjct 1847 TTGTGGGGAAGGTACCTTAGGCCAGCTTAAACGAAGATATGGTTTAGAAGGAGCTGATGA 1906
Query 1777 GGCGGTTAGAAAGTTGAGATGTATATGGATCTCTCACATCCACGCCGATCACCATACAGG 1836
|| || ||||| ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 1907 AGCAGTCAGAAACTTGAGATGTATATGGATCTCTCACATCCATGCTGATCACCATACGGG 1966
Query 1837 TCTTGCGAGGATTCTAGCTCTTAGAGGCAAGCTTTTGAAAGGAGTGACTCACGAGCCAGT 1896
|||||| || || || |||| ||| | |||||||||||||| || |||| |||||||
Sbjct 1967 TCTTGCAAGAATCCTTGCTCGCAGACGTGAGCTTTTGAAAGGATTGGCTCATGAGCCAGC 2026
Query 1897 GATTGTGGTGGGACCGAGGCCGCTTAA-ACGCTTTCTCGATGCATATCAAAGACTTGAGG 1955
|||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||
Sbjct 2027 AATTGTGGTTGGACCGAGATCGCTTAAGA-ACTTTCTCGATGCATATCAAAGACTTGAGG 2085
Query 1956 ATTTAGATATGGAATTTCTAGATTGTAG-AAGCACCACAACAACTTCTTGGGCTTCTTTA 2014
||||||||||||| ||||| || || || || |||||||||||| |||||||||||| ||
Sbjct 2086 ATTTAGATATGGAGTTTCTCGACTGCAGGAA-CACCACAACAACATCTTGGGCTTCTGTA 2144
Query 2015 GAAAGC-G--GC---G-G-------C--G--GCG--A-TGCAGAGGGATCTTTGTTTAGT 2053
|||| | | || | | | | ||| | ||||||||| |||||||| |||
Sbjct 2145 GAAACCAGCCGCCCTGAGAAAAATACCAGTAGCGGCAATGCAGAGGGTTCTTTGTTCAGT 2204
Query 2054 GAAGGAAGTCCTA-TGCAGAGTGTCTTTAAAAGATCTGAT-ATCCCG--G-CGGATAATT 2108
||||||||| || |||||||| | | ||||||| | || | ||| | | || ||||
Sbjct 2205 AAAGGAAGTC-TAATGCAGAGTATATATAAAAGACC-GAGCAGCCCACTGACAGACAATT 2262
Query 2109 CTTCGGTTTTGCTGTGT-TTAAAGAATCTGAAGAAGGTTCTTAGCGAAATCGGATTGGAT 2167
|||| | ||| | | | || ||||| ||||| || || || ||||||| || |||||
Sbjct 2263 CTTCAGCTTTACCAT-TCTTGAAGAAACTGAAAAAAGTCCTCGGCGAAATGGGGTTGGA- 2320
Query 2168 G-ATTTGATTAGTTTTCCTGTTGTACATTGTCCTCAAGCCTATGGTGT--CGTTATAAAA 2224
| |||||||||| ||||||||||| ||||| |||||||||| ||| || ||||| |||
Sbjct 2321 GCATTTGATTAGCTTTCCTGTTGTGCATTGCCCTCAAGCCTTTGGGGTTTCGTTA-AAA- 2378
Query 2225 GCAGCTGAAAGAGTAAATAGTGTTGGAGAACAAATCCCGGGATGGAAAATGGTTTATTCA 2284
||||| |||||| ||| | || ||||| | || ||||| |||||||||||||| ||
Sbjct 2379 GCAGCAGAAAGAAAAAACATTGCCGGAGATGAGATTCCGGGGTGGAAAATGGTTTACTCG 2438
Query 2285 GGCGACACAAGACCTTGTCCCGAGATCGTTGAAGCATCACGAG-ATGCAACAGTTCTTAT 2343
|| |||||||| |||||||| ||||| |||||||| ||| || | ||||||||||||||
Sbjct 2439 GGAGACACAAGGCCTTGTCCTGAGATGGTTGAAGCTTCAAAAGGA-GCAACAGTTCTTAT 2497
Query 2344 ACATGAGGCTACGTTTGAAGATGCATTGATAGAAGAAGCTTTGGCGAAGAATCACAGCAC 2403
||||||||| |||||||| ||||| ||| ||||||||||| |||| || || || |||||
Sbjct 2498 ACATGAGGCGACGTTTGAGGATGCGTTGGTAGAAGAAGCTGTGGCTAAAAACCATAGCAC 2557
Query 2404 GACTAAAGAAGCAATCGATGTGGGATCTTCTGCAAATGCGTATCGGATTGTTCTCACGCA 2463
||||||||||||||| | || |||||||| ||| || || || | || || || ||
Sbjct 2558 AACTAAAGAAGCAATCAAAGTTGGATCTTCAGCAGGTGTATACCGAACCGTACTGACACA 2617
Query 2464 TTTTAGCCAGCGATATCCGAAGATTCCGGTGATTGATGAGTCGCATATGCATAATACCTG 2523
|||||||||| |||| || ||||| ||||||||||| || || |||||||| ||||| ||
Sbjct 2618 TTTTAGCCAGAGATACCCAAAGATCCCGGTGATTGACGAATCACATATGCACAATACATG 2677
Query 2524 CATTGCCTTTGATCTGATGAGTATAAACATGGCGGATTTGCAAGTGCTTCCTAAGGTCTT 2583
||||||||||||| ||||||||||||||||||||||||| || |||||||| ||| | ||
Sbjct 2678 CATTGCCTTTGATATGATGAGTATAAACATGGCGGATTTACATGTGCTTCCAAAGATTTT 2737
Query 2584 ACCGTATTTCAAAACTCTCTTCAGAGATGA-GATGGTTGAAGA 2625
||| || ||||||||||| |||||| | | | ||||||||||
Sbjct 2738 ACCTTACTTCAAAACTCTATTCAGAAACCAAG-TGGTTGAAGA 2779
Score = 388 bits (210), Expect = 1e-106
Identities = 374/454 (82%), Gaps = 8/454 (2%)
Strand=Plus/Plus
Query 202 TTCTTTCGTCTTTAATAAGCGAAGAGCTGAAGGAATT-GATAAAACCGATAAG-aaaaaa 259
|||||||| ||||||||| ||||||||| ||| ||| ||||| ||||||| || |
Sbjct 302 TTCTTTCGAGTTTAATAAGAGAAGAGCTG-AGGGATTGGATAAGGTCGATAAGCCTAAGA 360
Query 260 aGAAATCTTGAA-CGCAAAACCCAAAAGCTTAATCCCT-CTAACACTATTGCTTACGCAC 317
|| |||| | || | || || | | ||||| |||| | || || || || || | |
Sbjct 361 AG-AATC-TCAAGAGGAATACTCGCACCCTTAA-CCCTACCAATACCATCGCCTATGTTC 417
Query 318 AGATTCTTGGAACGGGAATGGATACTCAGGATACATCATCTTCTGTATTACTCTTCTTTG 377
|||| ||||| || ||||||||||| |||||||| ||| |||||||||||||||||||||
Sbjct 418 AGATCCTTGGGACTGGAATGGATACACAGGATACGTCACCTTCTGTATTACTCTTCTTTG 477
Query 378 ACAAACAAAGATTCATTTTTAATGCTGGAGAGGGCTTGCAACGTTTTTGTACAGAGCATA 437
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||
Sbjct 478 ACAAACAAAGATTCATCTTTAATGCTGGAGAGGGGTTGCAACGTTTTTGTACTGAACATA 537
Query 438 AGATTAAACTATCAAAGATAGATCATGTGTTTTTGTCTCGTGTCTGCTCAGAGACAGCAG 497
| ||||| |||||||| |||||||| | |||||||||||||| ||||||||||||||||
Sbjct 538 AAATTAAGTTATCAAAGGTAGATCATATATTTTTGTCTCGTGTGTGCTCAGAGACAGCAG 597
Query 498 GAGGACTTCCAGGTCTTTTACTAACTCTTGCTGGTATTGGTGAAGAAGGGCTTTCGGTGA 557
| || |||||||||||| |||| || || |||||||| || ||| |||| || || || |
Sbjct 598 GCGGGCTTCCAGGTCTTCTACTGACCCTAGCTGGTATCGGGGAACAAGGACTATCCGTCA 657
Query 558 ATGTATGGGGTCCTTCGGATCTTAACTATTTAGTTGATGCAATGAAGTCGTTTATTCCAC 617
| |||||||||||||| |||||||| ||||| |||||||| |||| ||| ||||| || |
Sbjct 658 ACGTATGGGGTCCTTCAGATCTTAAGTATTTGGTTGATGCTATGAGGTCATTTATCCCTC 717
Query 618 GGGCGGCTATGGTTCATACTCGGAGTTTTGGTCC 651
| || || ||||||||||| | |||||||||||
Sbjct 718 GTGCTGCCATGGTTCATACAAGAAGTTTTGGTCC 751
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135199911385
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5