BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474434
Length=2505
Score E
Sequences producing significant alignments: (Bits) Value
AT1G53140.1 | Symbols: DRP5A | Dynamin related protein 5A | chr... 3999 0.0
> AT1G53140.1 | Symbols: DRP5A | Dynamin related protein 5A | chr1:19799238-19802598
FORWARD LENGTH=2644
Length=2644
Score = 3999 bits (2165), Expect = 0.0
Identities = 2391/2504 (95%), Gaps = 0/2504 (0%)
Strand=Plus/Plus
Query 1 CCTTCTTCAATGGCGAATTCAAACACATACCTAACCACACCGACGAAAACCCCATCTTCG 60
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 25 CCTTCGTCAATGGCGAATTCAAACACATACCTAACCACACCGACTAAAACCCCATCTTCA 84
Query 61 AGGAGAAACCAACAGAGTCAATCGAAGATGCAATCTCACTCCAAGGATCCGATAAACGCA 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 85 AGGAGAAACCAACAGAGTCAATCTAAGATGCAATCTCACTCCAAGGATCCGATAAACGCA 144
Query 121 GAGTCTAGGTCACGATTCGAGGCATACAATCGTCTCCAAGCAGCAGCCGTTGCTTTCGGA 180
|| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 145 GAATCTAGGTCACGATTCGAGGCATACAATCGTCTTCAAGCAGCAGCCGTGGCTTTCGGA 204
Query 181 GAGAAACTTCCGATACCAGAGATTGTAGCCATTGGTGGCCAATCAGACGGAAAAAGCTCT 240
||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct 205 GAGAAACTTCCGATACCGGAGATTGTAGCCATTGGTGGTCAATCAGACGGCAAAAGCTCT 264
Query 241 CTTCTCGAAGCGCTTTTAGGGTTCCGATTTAATGTCCGTGAAGTTGAAATGGGTACTCGA 300
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 265 CTTCTCGAAGCACTTTTAGGGTTCCGATTCAATGTCCGTGAAGTTGAAATGGGCACTCGA 324
Query 301 CGCCCTTTGATTCTCCAGATGGTTCATGATTTATCAGCGTTAGAACCACGGTGTCGATTT 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 CGCCCTTTGATTCTCCAGATGGTTCATGATTTATCAGCGTTAGAACCACGGTGTCGATTC 384
Query 361 CAGGATGAAGATTCTGAAGAATATGGAGGTCCAATTGTTTCGGCTACAGCAGTAGCAGAT 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 385 CAGGATGAAGATTCTGAAGAATATGGAAGTCCAATTGTTTCGGCTACAGCAGTAGCAGAT 444
Query 421 GTAATTAGGTCTAGGACAGAGTCGCTTTTGAAGAAGACGAAAACCGCAGTTTCGTCTAAG 480
|||||||||||||| |||||| | |||||||||||||||||||| ||||| ||| | |||
Sbjct 445 GTAATTAGGTCTAGAACAGAGGCACTTTTGAAGAAGACGAAAACTGCAGTCTCGCCAAAG 504
Query 481 CCGATTGTGATGAGAGCTGAGTATGCCCATTGTCCAAATCTGACTATCATTGATACTCCT 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 505 CCGATTGTGATGAGAGCTGAGTATGCTCATTGTCCAAATCTGACTATCATTGATACTCCT 564
Query 541 GGATTTGTTCTTAAGGCCAAGCAAGGAGAGCCTGAAACCACACCTGATGAAATTTTATCG 600
|| |||||||| ||||| ||| |||||||||||||||| ||||||||||||||| | ||
Sbjct 565 GGTTTTGTTCTCAAGGCTAAGAAAGGAGAGCCTGAAACTACACCTGATGAAATTCTGTCA 624
Query 601 ATGGTCAAGTCACTGGCTAGTCCTCCACATCGCATTCTCTTGTTCCTTCAGCAGAGTAGT 660
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 625 ATGGTTAAGTCACTGGCTAGTCCTCCACATCGTATTCTCTTGTTCCTTCAGCAGAGTAGT 684
Query 661 GTGGAATGGTGTTCATCCTTGTGGTTGGATGCAGTTCGTGAGATTGATTCAAGCTTTCGA 720
||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 685 GTGGAGTGGTGCTCATCCTTGTGGTTAGATGCTGTTCGTGAGATTGATTCAAGCTTTCGG 744
Query 721 AGGACTATTGTTGTTGTCTCCAAGTTTGATAATCGCCTCAAGGAATTTAGTGATCGCGGT 780
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 745 AGGACTATTGTTGTTGTGTCCAAGTTTGATAATCGCCTTAAGGAATTTAGTGATCGCGGT 804
Query 781 GAAGTGGATCGTTATCTGAGTGCTAGCGGATACCTTGGGGAGAACACTCGTCCTTATTTC 840
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 GAAGTTGATCGTTATCTGAGTGCTAGCGGATACCTTGGGGAGAACACTCGTCCTTATTTC 864
Query 841 GTGGCATTGCCAAAAGACCGGAGCACTGTCTCAAATGATGAATTTCGCCGACAAATATCT 900
|||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 865 GTGGCATTACCAAAAGACAGGAGCACTATCTCAAATGATGAATTTCGCCGACAAATATCT 924
Query 901 CAGGTGGACACTGAAGTTATAAGGCATTTACGGGAGGGAGTTAAGGGAGGATTTGATGAA 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 CAGGTGGACACTGAAGTTATAAGGCATTTACGGGAGGGAGTTAAGGGAGGATTTGATGAA 984
Query 961 GAAAAATTCCGGTCCTATATTGGTTTTGGATCATTAAGAGATTTCTTAGAGTCTGAGCTT 1020
|||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||
Sbjct 985 GAAAAATTCCGGTCCTGTATTGGTTTTGGGTCTTTAAGAGATTTCTTAGAGTCTGAGCTG 1044
Query 1021 CAGAAGAGATACAAGGAAGCTGCACCAGCAACACTAGCTTTGCTTGAACAGCGCTGCTCT 1080
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1045 CAGAAGAGATACAAGGAAGCTGCACCAGCAACACTAGCTTTGCTTGAAGAACGCTGCTCT 1104
Query 1081 GAGGTAACCGACGATATGCTGAGAATGGAGATGAAAATTCAAGCTACTTCTGATGTTGCT 1140
||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1105 GAGGTAACCGATGATATGCTGAGAATGGATATGAAAATCCAAGCTACTTCTGATGTTGCT 1164
Query 1141 CATCTCAGAAAAGCGGCAATGCTATACACCGCTTCTATTAGCAATCATGTGGGGGCTTTG 1200
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1165 CATCTCAGAAAAGCGGCAATGCTATACACTGCTTCTATTAGCAATCATGTGGGAGCTTTG 1224
Query 1201 ATTGATGGAGCTGCAAATCCAGCACCTGAGCAATGGGGGAAAACAACTGAAGAAGAACGT 1260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1225 ATTGATGGAGCTGCAAATCCAGCACCTGAACAATGGGGGAAAACAACTGAAGAAGAACGT 1284
Query 1261 GGTGAGAGTGGCATTGGAAGTTGGCCAGGCGTAAGTGTGGATATTAAGCCGCCCAATGCT 1320
|| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||||||
Sbjct 1285 GGCGAAAGTGGCATTGGAAGCTGGCCAGGTGTAAGTGTGGATATCAAGCCACCCAATGCC 1344
Query 1321 GTTCTTAAACTATATGGAGGAGCTGCTTTTGAAAGAGTGATTCATGAGTTCCGTTGTGCA 1380
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1345 GTTCTTAAACTCTATGGAGGAGCTGCTTTTGAAAGAGTGATTCATGAATTCCGTTGTGCA 1404
Query 1381 GCCTACTCAATTGAGTGCCCTCCAGTGTCAAGAGAGAAGGTAGCAAACATTTTGCTAGCT 1440
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1405 GCCTACTCAATCGAGTGCCCTCCAGTGTCAAGAGAGAAGGTAGCAAACATTCTGCTTGCT 1464
Query 1441 CATGCTGGGCGTGGAGGTGGTAGAGGAGTAACAGAAGCTTCAGCAGAAATTGCTCGAACC 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1465 CATGCTGGGCGTGGAGGTGGTAGAGGAGTAACAGAAGCTTCAGCAGAAATTGCTCGAACC 1524
Query 1501 GCTGCGCGGTCATGGCTCGCTCCTCTTCTTGACACAGCCTGCGACAGGCTTGCCTTTGTT 1560
||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1525 GCTGCACGGTCATGGCTTGCTCCTCTTCTTGACACAGCCTGCGACAGACTTGCCTTTGTA 1584
Query 1561 TTAGGAAGTCTCTTTGAAATTGCTCTAGAAAGAAACCTGAACCAAAACTCAGAATATGAG 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1585 TTAGGAAGTCTCTTTGAAATTGCTCTAGAAAGAAACCTGAACCAAAACTCAGAATATGAG 1644
Query 1621 AAGAAAACCGAAAATATGGATGGATATGTGGGCTTTCATGCCGCTGTACGGAACTGTTAC 1680
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1645 AAGAAAACCGAAAATATGGATGGATACGTGGGTTTTCATGCCGCTGTACGGAACTGTTAC 1704
Query 1681 AGCCGTTTTGTGAAGAATCTTGCGAAACAGTGTAAGCAATTAGTTAGACACCATCTTGAT 1740
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1705 AGCCGTTTTGTGAAGAATCTTGCAAAACAGTGTAAGCAATTAGTAAGACACCATCTTGAT 1764
Query 1741 TCAGTGACCAGCCCATATTCCATGGCGTGCTATGAGAATGACTACCACCAAGGAGGAGCT 1800
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1765 TCAGTGACCAGTCCATATTCCATGGCGTGCTATGAGAATAACTACCACCAAGGAGGAGCT 1824
Query 1801 TTTGGCTCTTATAACAAATTCAACCAAGCCTCAGGTAATTCGTTTTGCTTCGAGCTCTCT 1860
|||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1825 TTTGGCGCTTATAACAAATTCAACCAAGCCTCACCTAATTCGTTTTGCTTCGAGCTCTCT 1884
Query 1861 GATACCAGTCGTGATGAGCCAATGAAAGATCAAGAAAACATTCCTCCTGAGAATAATAAT 1920
|||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 1885 GATACCAGCCGTGATGAGCCAATGAAAGACCAAGAAAACATTCCTCCTGAGAAGAACAAT 1944
Query 1921 GGCCAAGAGACAACATCAGGAAAAGGAGGGGAAAGCCACATAACAGTTCCTGAGACGCCT 1980
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1945 GGCCAAGAGACAACACCAGGAAAAGGAGGGGAAAGCCACATAACAGTCCCTGAGACTCCT 2004
Query 1981 TCACCGGACCAACCTTGTGAGATAGTGTATGGTTTGGTAAAGAAAGAAATTGGAAATGGT 2040
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2005 TCACCGGACCAACCATGTGAAATAGTGTATGGTTTGGTAAAGAAAGAAATTGGAAATGGT 2064
Query 2041 CCTGATGGTGTTGGAGCTAGAAAAAGAATGGCGAGAATGGTGGGAAACAGGAACATAGAG 2100
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2065 CCTGATGGTGTTGGAGCTAGAAAAAGAATGGCGAGAATGGTTGGAAACAGGAACATAGAG 2124
Query 2101 CCATTTAGAGTTCAGAATGGTGGGCTTATGTTTGGTAACGCGGATAACGGAATGAAATCA 2160
|||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 2125 CCATTTAGAGTTCAGAATGGTGGGCTTATGTTTGCTAATGCAGATAACGGAATGAAATCA 2184
Query 2161 AGCTCTGCTTACTCTGAGATATGTTCATCAGCTGCACAACATTTTGCTAGAATACGCGAA 2220
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 2185 AGCTCTGCTTACTCTGAGATATGTTCATCAGCCGCACAACATTTTGCTAGAATTCGCGAA 2244
Query 2221 GTTCTTGTCGAAAGAAGCGTAACATCGACTCTAAACTCAGGGTTTCTAACACCTTGCCGA 2280
|| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct 2245 GTGCTTGTCGAAAGAAGCGTAACATCAACTCTAAACTCAGGATTTCTAACTCCTTGCCGA 2304
Query 2281 GACAGACTAGTGGTTGCACTTGGATTGGATCTATTTGCAGTAAATGACGATAAGTTCATG 2340
|||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 2305 GACAGACTAGTGGTGGCACTTGGATTGGATCTATTTGCAGTGAATGACGACAAGTTCATG 2364
Query 2341 GACATGTTCGTTGCTCCTGGAGCCATTGACGTACTACAGAACGAACGTCAACAGCTTCAG 2400
|||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct 2365 GACATGTTCGTTGCTCCTGGAGCCATTGTGGTACTACAAAACGAACGCCAACAGCTTCAG 2424
Query 2401 AAACGTCAGAAGATTCTTCAATCTTGCTTGACTGAATTCAAAACCGTGGCTCGTTCTCTA 2460
|||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct 2425 AAACGTCAAAAGATTCTTCAATCTTGCTTGACTGAGTTTAAAACGGTGGCTCGTTCTCTA 2484
Query 2461 TGATGAAATGAATGATCATTGTCTCTATGATGTGTTCTCTTCTC 2504
| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 2485 TAATGAAATGAACGATCATTGTCTCTATGATGTGTTCTCTTCTC 2528
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124313684754
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5