BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474438
Length=2547
Score E
Sequences producing significant alignments: (Bits) Value
AT1G53165.3 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfam... 3814 0.0
AT3G15220.1 | Symbols: | Protein kinase superfamily protein | ... 1707 0.0
> AT1G53165.3 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfamily
protein | chr1:19813804-19819564 FORWARD LENGTH=2619
Length=2619
Score = 3814 bits (2065), Expect = 0.0
Identities = 2448/2618 (94%), Gaps = 85/2618 (3%)
Strand=Plus/Plus
Query 1 AAAAATGAAAAATTGAATAATCAAAATCGAGAAAACTTCATAATCGAAGTTC----T--T 54
|||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
Sbjct 16 AAAAATGAAAAATTGAATAATCAAAATCGAGAAAACTTGATAATCGAAGTTCTTGTTCAT 75
Query 55 CTTCTCGATCTCTTGGTGCTCGAGAGAGAGAGCATTGGATAGAGAATTTTCTTGGGAAAG 114
||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
Sbjct 76 CTTCTCGATCTCTTGGTGCTC----GAGA-AGCATTGGATAGAGAATTTTCTTGGGAAGG 130
Query 115 TAATAG-A-AAAACTAAGATCTGTATATATATTCGACGCGTCTTCTTCGTTCACCTATA- 171
| |||| | |||| ||||||||| ||||||||| |||||||||||||||||| |||||
Sbjct 131 TGATAGAACAAAAGTAAGATCTG--TATATATTCAACGCGTCTTCTTCGTTCAACTATAT 188
Query 172 AGGTAATCTGAATG-CGATCCTGTTT-GTTGTGGAAATGGATGATGTTGCTGGTTTACAA 229
| | | ||| | | | | ||| |||||||||||||||||||||||||||||||||
Sbjct 189 AAG-AGGGGGAA-GAAGGTGGT-TTTAGTTGTGGAAATGGATGATGTTGCTGGTTTACAA 245
Query 230 GAGGCAGCTGGAACCAGATTTAGCCAGTTTGAGTTAATCGGAAGAGGATCGTTTGGTGAT 289
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 246 GAGGCAGCTGGAACCAGATTTAGCCAGTTTGAGCTAATCGGAAGAGGATCGTTTGGTGAT 305
Query 290 GTCTACAAAGCGTTTGATACGGTGCTTAACAAAGATGTTGCCATTAAAGTTATTGATTTG 349
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||
Sbjct 306 GTCTACAAAGCGTTTGATACGGAGCTTAACAAAGACGTTGCCATTAAAGTTATTGATCTG 365
Query 350 GAAGAATCAGAAGACGAGATTGAAGATATACAGAAGGAAATTTCAGTATTGTCACAATGC 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 GAAGAATCAGAAGACGAGATTGAAGATATACAGAAGGAAATTTCAGTATTGTCACAATGC 425
Query 410 CGTTGCCCATATATTACCGAATACTATGGTTCTTACCTTCACCAGACCAAGTTATGGATC 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 CGTTGCCCATATATTACCGAATACTATGGTTCTTACCTTCACCAGACCAAGTTATGGATC 485
Query 470 ATCATGGAATATATGGCTGGTGGCTCAGTTGCTGACCTTCTTCAACCGGGTAATCCATTG 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 ATCATGGAATATATGGCTGGTGGCTCAGTTGCTGACCTTCTTCAACCGGGTAATCCATTG 545
Query 530 GATGAAATTTCAATTGCTTGTATTACGCGCGACCTACTTCATGCTGTTGAATATCTCCAC 589
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 546 GATGAAATTTCAATTGCTTGTATTACGCGCGACCTACTTCATGCTGTTGAATATCTCCAT 605
Query 590 GCTGAGGGAAAAATCCACAGAGATATTAAAGCCGCTAATATTTTGTTGAGTGAGAATGGT 649
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 606 GCTGAGGGAAAAATCCACAGAGATATTAAAGCCGCCAATATTTTGTTGAGTGAGAACGGT 665
Query 650 GATGTTAAGGTCGCGGACTTTGGTGTTTCTGCACAATTAACCCGGACAATATCAAGGAGA 709
||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 666 GATGTTAAGGTTGCAGACTTTGGTGTTTCTGCACAATTAACCCGGACTATATCAAGGCGA 725
Query 710 AAGACATTTGTGGGAACACCATTTTGGATGGCACCAGAAGTGATTCAGAACTCAGAAGGG 769
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 726 AAGACATTTGTAGGAACACCATTTTGGATGGCACCAGAAGTGATTCAGAACTCCGAAGGT 785
Query 770 TATAATGAGAAGGCAGATATATGGTCTCTTGGAATAACAATGATCGAGATGGCCAAAGGA 829
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 786 TATAATGAGAAGGCAGATATATGGTCTCTTGGAATAACAATGATAGAGATGGCAAAAGGA 845
Query 830 GAACCTCCACTTGCTGACCTTCATCCTATGAGAGTGCTTTTTATCATTCCCCGGGAAAGC 889
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 846 GAACCTCCCCTTGCTGACCTTCATCCTATGAGAGTGCTTTTTATCATTCCCCGGGAAAGC 905
Query 890 CCTCCTCAGTTAGATGAGCATTTTTCACGTCCTTTGAAGGAATTTGTTTCGTTCTGCTTG 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 906 CCTCCTCAGTTAGATGAGCATTTTTCACGTCCTTTGAAGGAATTTGTTTCGTTCTGCTTG 965
Query 950 AAAAAGGCTCCTGCTGAGAGACCAAGTGCCAAAGAACTTCTCAAACATAGATTTATAAAG 1009
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 966 AAAAAGGCTCCGGCTGAGAGACCAAATGCCAAAGAACTTCTCAAACATAGATTTATAAAG 1025
Query 1010 AATGCTAGGAAAAACCCGAAACTTCTTGAAAGAATAAGAGAGCGGCCAAAATACCAAGTA 1069
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1026 AATGCTAGGAAAAGCCCGAAACTACTTGAAAGAATAAGAGAGCGGCCAAAATACCAAGTA 1085
Query 1070 AAAGAGGACGAAGAGATTCCAACAAACGGTCCAAAATCTCCCG-TGGAATCATCTGGGAC 1128
|||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||
Sbjct 1086 AAAGAGGACGAAGAGATTCCAACAAACGGTCCAAAAGCTCCGGCT-GAATCATCTGGGAC 1144
Query 1129 TGTTAGAGTGGCTGGAGATGAGAGGGGCCAGGGAAC-T-T----C-----TGG---AA-- 1172
||||||||||||| ||||||||| ||||||||||| | | | ||| ||
Sbjct 1145 TGTTAGAGTGGCTAAAGATGAGAGAGGCCAGGGAACTTCTGGAACTAGGTTGGATAAATG 1204
Query 1173 -----CT--A-GTTTTCAGGTAAAAACTGTCAGAAATGCGGGGTGGGACTTTAGCTTTGG 1224
| | |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1205 GTTGGATAAATGTTTTCAGGTAAAAACTGTCAGAAATGCGGGGTGGGACTTTAGCATTGG 1264
Query 1225 GGGTTCACAGGGTGCTGGAACTGTTCGAGCTTTAAAACCTCCACAAGCCAGGGAAAGGCG 1284
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265 GGGTTCGCAGGGTGCTGGAACTGTTCGAGCTTTAAAACCTCCACAAGCCAGGGAAAGGCG 1324
Query 1285 CCAAGAAGTTAGTTCTAATCAGACTTCTCAAAAAACATCACGAGCCAGTGGTAGTCAATT 1344
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1325 CCAAGAAGTTAATTCTAATCAGACTTCTCAAAAAACATCACGAACCAGTGGTAGTCAATT 1384
Query 1345 GTCATCCACTTTTGGTGTCCATGAAATCTCTGAAGGAGGTTTTATTAAAAGAGATTCTTA 1404
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1385 GTCATCCACTTTTGGTGTCCCTGAAATCTCTGAAGGAGGTTTTAATAAAAGAGATTCTTA 1444
Query 1405 TCAGAATAACAATCAAGAAGAAGATGATTCAAGTGGTTCTGGAACTGTTGTCATAAGATC 1464
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 TCAGAATGACTATCAAGAAGAAGATGATTCAAGTGGTTCTGGAACTGTTGTCATAAGATC 1504
Query 1465 TCCGAGAAGCTCTCAGCCATCTTCAATGTTTCGTGATCAAAGCTCTGGGTCTAACAGGTA 1524
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1505 GCCGAGAAGCTCTCAGTCATCTTCAATGTTTCGTGATCAAAGCTCTGGGTCTACCAGGTA 1564
Query 1525 TACGTCTTTTGATGATGCTTCTACGAGTGGAACAGTCGTTGTCCGTGGGCAGAATGATGA 1584
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1565 TACGTCTTTTGATGATGCTTCTACAAGTGGAACAGTTGTTGTCCGTGGGCAGAATGATGA 1624
Query 1585 TTCTGGATCACCTCGAACACCAAGATCTAGACTAGGGCTTCAAGAAAGAAGTTCCAGTGC 1644
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1625 TTCTGGATCACCTCGAACACCGAGATCTAGACTAGGGCTTCAAGAAAGAAGTTCCAGTGC 1684
Query 1645 CTCAGAAGATAGCATCTCAAATCTTGCAGAGGCAAAATTAGCACTTGAAGCAGGTTTCAG 1704
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685 CTCAGAGGATAGCATCTCAAATCTTGCAGAGGCAAAATTAGCACTTGAAGCAGGTTTCAG 1744
Query 1705 AAGAGGGAATGCTAGGGAAAAACTTGGTAATGGGAAGGTTAACAAAAGAAGAGAACAAGC 1764
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 1745 AAGAGGGAATGCTAGGGAAAGACTTGGTAATGGGAAGGTTAACAAAAGAAGAGAGCAAGC 1804
Query 1765 AACAGATAATTCTGATCACTTGAGAAATTCCCGCGATCATTCTGATAAACAAAAACCAGT 1824
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1805 AACAGATAATTCTGATTACTTGAGAAATTCCCGCGATCATTCTGATAAACAAAGACCAGT 1864
Query 1825 CATAAGATCACAACAAGTGAGTGATGAT---GAAGATGACTCCAAATTAGCATCATTGTC 1881
||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1865 CATGAGATCACAACAAGTGAGTGATGATGAAGAAGATGACTCCAAATTGGCATCATTGTC 1924
Query 1882 TGCATCATTGTCACTATTGCTATTACCATCCCTAAAAGAGGCTGTCGGGGGTGACGACTC 1941
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1925 TGCATCATTGTCACTATTGCTATTACCATCCCTAAAAGAGGCTGTTGGGGGTGACGACTC 1984
Query 1942 AAAAGGATCTGTTGGACATAGAGTTTCGAGATCCTTAGTGAACATGGAACGCGAAAAGCC 2001
||||||| || |||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1985 AAAAGGAACTATTGGACATAGAGTTTCGAGATCCTTAGTTAAAATGGAACGCGAAAAGCC 2044
Query 2002 TGGTTCTTCTGAAGCTTTTATTGCCAAACTTATCGAACAGTTGGGAAGTACAAATGAAGT 2061
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2045 TGGTTCTTCTGAAGCTTTTATTGCCAAACTGATCGAACAGTTGGGAAGTACAAAGGAAGT 2104
Query 2062 GTCAGTGAAAGAGGTGCAAGACATGGCGATCCGTGTGTTCGCTAAGACAATGAACAATGA 2121
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2105 GTCAGTGAAAGAAGTGCAAGACATGGCGATCCGTGTGTTCGCTAAGACAATGAACAATGA 2164
Query 2122 TGCAGAGAACAAAAGAAAGCAAGCTAGCAAAGAATTTAGTTCCAATGCAAACTTTAGTCC 2181
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2165 TGCAGAGAACAAAAGAAAGCAAGCTAGCAAAGAATTTAGTTCTAATGCAAACTTTAGTCC 2224
Query 2182 ACTTGCAAGATTCTTATTCTCAAGATGGCTAGGTCAAACATCGCGTGATCTTAACCAAAG 2241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2225 ACTTGCAAGATTCTTATTCTCAAGATGGCTAGGTCAAACATCGCGTGATCTTAACCAAAG 2284
Query 2242 TTGAGACACGCACAGAAGACAGAACATAAGAATGTTGTTTGTGTGTCTTTTACATTGATT 2301
|||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2285 TTGAGAAACTCACAGAAGACAGAACATAAGAATGTTGTTTGTGTGTCTCTTACATTGATT 2344
Query 2302 TGATGCATTGAATTTTGGTATTTATGTGTATAAATTTTTCATCAGAAAAAGGGTGTattt 2361
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 2345 TGATGCATTGAATTTTGGTATTTATGTGTATAATTTTTTT-TCAGAAAAAGGGTGTATTT 2403
Query 2362 ataaa-ttttaagtttctttttcttt--tt----tt----a----attgt--catttttt 2404
||||| |||||||||| ||||| ||| || || | ||| | | |||||
Sbjct 2404 ATAAAATTTTAAGTTTTTTTTTTTTTAATTGGCATTTTCTACCTTATTTTGGCCTTTTT- 2462
Query 2405 agttttatctttattttcccttcctggttttttt-a-----------T-T-CTTAGTTGT 2450
||||||||||||||||| |||||||||||||||| | | | |||||||||
Sbjct 2463 AGTTTTATCTTTATTTTTCCTTCCTGGTTTTTTTTAGAGAGGAAGCATATTCTTAGTTGT 2522
Query 2451 ATAATTAAGGGCTTGCCTTT-ATCTTGTGATAATATGTAATCACTCTTACCATTTCATTC 2509
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 2523 ATAATTAAGGGCTTGCCTTTTATCT-GTGATAATATGTAATCACTCTTACCATTTCATTC 2581
Query 2510 ATAAACCAGTACTCATTATCATTATTTTTGTTTCTCTT 2547
||| |||||||||||| |||||||||||||||| ||||
Sbjct 2582 ATATACCAGTACTCATAATCATTATTTTTGTTTTTCTT 2619
> AT3G15220.1 | Symbols: | Protein kinase superfamily protein
| chr3:5126597-5132306 REVERSE LENGTH=2574
Length=2574
Score = 1707 bits (924), Expect = 0.0
Identities = 1801/2211 (81%), Gaps = 114/2211 (5%)
Strand=Plus/Plus
Query 195 TTGT-TGTGGAAATGGATGATGTTGCTGGTTTACAAGAGGCAGCTGGAACCAGATTTAGC 253
|||| |||||| ||||| |||||||| ||||||||||||||||||||| |||||||||||
Sbjct 188 TTGTATGTGGAGATGGACGATGTTGCGGGTTTACAAGAGGCAGCTGGAGCCAGATTTAGC 247
Query 254 CAGTTTGAGTTAATCGGAAGAGGATCGTTTGGTGATGTCTACAAAGCGTTTGATACGGTG 313
||| ||||||| || |||||||| || |||||||||||||| ||||||||||||| ||
Sbjct 248 CAGATTGAGTTGATTGGAAGAGGCTCTTTTGGTGATGTCTATAAAGCGTTTGATAAGGAC 307
Query 314 CTTAACAAAGATGTTGCCATTAAAGTTATTGATTTGGAAGAATCAGAAGACGAGATTGAA 373
|| || ||||| |||||||||||||| || || |||||||||||||||| ||||| |||
Sbjct 308 CTCAATAAAGAAGTTGCCATTAAAGTAATCGACCTGGAAGAATCAGAAGATGAGATCGAA 367
Query 374 GATATACAGAAGGAAATTTCAGTATTGTCACAATGCCGTTGCCCATATATTACCGAATAC 433
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 368 GATATTCAGAAGGAAATTTCAGTATTGTCACAATGTCGTTGCCCATATATCACCGAATAC 427
Query 434 TATGGTTCTTACCTTCACCAGACCAAGTTATGGATCATCATGGAATATATGGCTGGTGGC 493
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 428 TATGGTTCTTACCTTCATCAGACCAAGTTGTGGATCATCATGGAATATATGGCCGGTGGC 487
Query 494 TCAGTTGCTGACCTTCTTCAACCGGGTAATCCATTGGATGAAATTTCAATTGCTTGTATT 553
|| |||||||| ||||||||| | |||||| |||||||||| ||||| ||||||||
Sbjct 488 TCTGTTGCTGATCTTCTTCAATCTAATAATCCGTTGGATGAAACATCAATCGCTTGTATC 547
Query 554 ACGCGCGACCTACTTCATGCTGTTGAATATCTCCACGCTGAGGGAAAAATCCACAGAGAT 613
|| ||||| | |||||||||||||||||||| || ||||||||| |||||||||||
Sbjct 548 ACACGCGATTTGCTTCATGCTGTTGAATATCTGCATAATGAGGGAAAGATCCACAGAGAC 607
Query 614 ATTAAAGCCGCTAATATTTTGTTGAGTGAGAATGGTGATGTTAAGGTCGCGGACTTTGGT 673
|||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct 608 ATTAAAGCTGCGAATATTTTGTTGAGCGAGAATGGCGATGTTAAGGTGGCGGACTTTGGT 667
Query 674 GTTTCTGCACAATTAACCCGGACAATATCAAGGAGAAAGACATTTGTGGGAACACCATTT 733
|| ||||| || |||| |||||||||||||| || ||||| ||||| ||||| ||||||
Sbjct 668 GTGTCTGCTCAGCTAACGCGGACAATATCAAGAAGGAAGACTTTTGTAGGAACCCCATTT 727
Query 734 TGGATGGCACCAGAAGTGATTCAGAACTCAGAAGGGTATAATGAGAAGGCAGATATATGG 793
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 728 TGGATGGCACCAGAAGTTATTCAGAACTCAGAAGGGTATAATGAGAAGGCAGATATTTGG 787
Query 794 TCTCTTGGAATAACAATGATCGAGATGGCCAAAGGAGAACCTCCACTTGCTGACCTTCAT 853
|| || ||||||||| | || |||||||| |||||||||||||| || ||||||||||||
Sbjct 788 TCGCTCGGAATAACAGTTATTGAGATGGCAAAAGGAGAACCTCCCCTAGCTGACCTTCAT 847
Query 854 CCTATGAGAGTGCTTTTTATCATTCCCCGGGAAAGC-CCTCCTCAGTTAGATGAGCATTT 912
|| ||||||||||||||||||||||| || |||| | || || |||||||||||||||||
Sbjct 848 CCCATGAGAGTGCTTTTTATCATTCCTCGAGAAA-CTCCACCACAGTTAGATGAGCATTT 906
Query 913 TTCACGTCCTTTGAAGGAATTTGTTTCGTTCTGCTTGAAAAAGGCTCCTGCTGAGAGACC 972
||| |||| | ||||| |||||||| || ||| |||| ||||| ||||| ||||||||
Sbjct 907 TTCCCGTCAAGTAAAGGAGTTTGTTTCATTATGCCTGAAGAAGGCCCCTGCCGAGAGACC 966
Query 973 AAGTGCCAAAGAACTTCTCAAACATAGATTTATAAAGAATGCTAGGAAAAACCCGAAACT 1032
|||||||||||||||| | ||||| |||||||| |||||||||||||||| ||||||||
Sbjct 967 AAGTGCCAAAGAACTTATTAAACACAGATTTATTAAGAATGCTAGGAAAAGTCCGAAACT 1026
Query 1033 TCTTGAAAGAATAAGAGAGCGGCCAAAATACCAAGTAAAAGAGGACGAAGAGATTCCAAC 1092
|||||| || ||||||||||||||||| |||||||||||||| || ||||||| ||| |
Sbjct 1027 TCTTGAGAGGATAAGAGAGCGGCCAAAGTACCAAGTAAAAGAAGATGAAGAGACTCCTAG 1086
Query 1093 AAACGGT-CCAAAATCTCCCGTGGAATCATCTGGGACTGTTAG-AGTGGCTGGAGATGAG 1150
|| || ||||| |||| || ||||||||||| |||||||| | | ||| |||||||
Sbjct 1087 GAATGGGGCCAAAG-CTCCAGTTGAATCATCTGGTACTGTTAGGA-TAGCTAGAGATGAA 1144
Query 1151 AGGGGCCAGGGAACTTCTGGA-ACTAGTTTTCAGGTAAAAACTGTCAGAAATGCGGGGTG 1209
|| |||| || | ||||| | ||||||||||| || || |||| |||||| || ||
Sbjct 1145 AGAAGCCAAGGCGCGCCTGGATA-TAGTTTTCAGGGGAATACCGTCAAAAATGCTGGATG 1203
Query 1210 GGACTTTAGCTTTGGGGGTTCACAGGGTGCTGGAACTGTTCGAGCTTTAAAACCTCCACA 1269
|||||||| | ||||||| |||||| || |||||| ||||| |||||||||||||| ||
Sbjct 1204 GGACTTTACCGTTGGGGGGTCACAGAGTATTGGAACAGTTCGTGCTTTAAAACCTCCTCA 1263
Query 1270 AGCCAGGGAAAGGCGCCAAGAAGTTAGTTCTAATCAGACTTCTCAAAAAACATCACGAGC 1329
||| ||||| ||||||||||||||| | |||||| || ||| |||| |||| || || |
Sbjct 1264 AGCAAGGGAGAGGCGCCAAGAAGTTTCTCCTAATCGGATTTCGCAAAGAACAACAAGA-C 1322
Query 1330 C-AGTGGTAGTCAATTGTCATCCACTTTTGGT-GTCCA-T----GAAATCT-CTGAAGGA 1381
| ||||||| ||||| |||||| | ||| || || | ||| || ||||||||
Sbjct 1323 CTAGTGGTAATCAATGGTCATCTGCGACTGGGAGTACAATTTCTGAAG-CTTCTGAAGGA 1381
Query 1382 GGTTTTATTAAAAGAGATTCTTATCAGAATAACAATCAAGA--------A-GAAGATGA- 1431
|||||| | | |||| | ||| ||||||| || || |||| | ||||| ||
Sbjct 1382 GGTTTTGTCAGAAGACACCCTTTTCAGAATGACCATGAAGATGGCTTCCACGAAGAGGAC 1441
Query 1432 --TTCA------AGTGGTTCTGGAACTGTTGTCATAAGATCTCCGAGAAGCTCTCAGCCA 1483
|||| ||||| || |||||||||||||||||| | || ||||| ||||| ||
Sbjct 1442 GATTCATCGCTCAGTGGATCGGGAACTGTTGTCATAAGAACCCCAAGAAGTTCTCAATCA 1501
Query 1484 TCTTCAATGTTTCGTGATCAAAGCTCTGGGTCTAAC---AGGTATAC-GTCTTTTGATGA 1539
|||||| | || ||||| | |||||||||||||| | |||||| | | ||||||||||
Sbjct 1502 TCTTCAGTATTCCGTGAACCAAGCTCTGGGTCTAGCGGCAGGTATGCAG-CTTTTGATGA 1560
Query 1540 TGCTTCTA-CGAGTGGAACAGTCGTTGTCCGTGGGCAGAATGATGATTCTGGATCACCTC 1598
|||||| | | |||||||| || ||||||||||| ||| | ||||| |||||||||||||
Sbjct 1561 TGCTTC-AGCAAGTGGAACTGTTGTTGTCCGTGGACAGTACGATGACTCTGGATCACCTC 1619
Query 1599 GAACACC-AAGATCTAGACTAGGGCTTCAAGAAAGAAGTTCCAGTGCCTCAGAAGATAGC 1657
|||| || || ||||||||||||| ||||||| |||| ||| ||||| ||||||||||||
Sbjct 1620 GAACCCCGAA-ATCTAGACTAGGGATTCAAGAGAGAACTTCGAGTGCATCAGAAGATAGC 1678
Query 1658 ATCTCAAATCTTGCAGAGGCAAAATTAGCACTTGAAGCAGGTTTCAGAAGAGGG-AATGC 1716
| | ||||||| || |||||||| |||||| || |||||||||||||| ||| || ||
Sbjct 1679 AACGCAAATCTCGCGGAGGCAAAGGCAGCACTCGACGCAGGTTTCAGAAG-GGGTAAGGC 1737
Query 1717 TAGGGAAAAACTTGG--T---AA-T---------G--GG-AAGGTTAACAAAAGAAGAGA 1758
||| |||| |||||| | || | | || |||||||||| |||||| ||
Sbjct 1738 TAGAGAAAGACTTGGAATGGGAAATAACAATAATGATGGGAAGGTTAACAGAAGAAGGGA 1797
Query 1759 ACAAGCAACAGATAATTCTGA-TCACTTGA-GAAATTCCCGCGATCATTCT-GATAAACA 1815
||| ||||| ||||||| | | || | |||||||| ||||| | ||| | ||||||
Sbjct 1798 GCAAATGGCAGATGATTCTGACT-A-TTCAAGAAATTCCGGCGATAAGTCTAG-TAAACA 1854
Query 1816 AAAACCAGT-CATAAGATCACAACAAGTGAGTGATGATGAAGATGACTCCAAATTAGCAT 1874
|||| ||| | ||| ||| |||||||||||||||| ||||||||||||| || | ||
Sbjct 1855 AAAAGTAGTTCC-AAGGTCAGAACAAGTGAGTGATGAAGAAGATGACTCCATATGGGAAT 1913
Query 1875 CATTGTCTGCATCATTGTCACTATTGCT-ATTACCATCCCTAAAAGAGGCTGTCGGGGGT 1933
||||| |||||||||||||| | ||||| || ||| ||||||||||| ||| | || |
Sbjct 1914 CATTGCCTGCATCATTGTCAGTGTTGCTCAT-ACCGTCCCTAAAAGAAGCTCTTGG---T 1969
Query 1934 GACGACTCAAAAGGATCTGTTG-GACATAGAGTTTCGAGATCC-TTAGTGAACATGGAAC 1991
||||| || |||| |||| || | | || ||| ||||||||| || |||| |||||||
Sbjct 1970 GACGATTCTAAAGAATCTACTGTG-CGTACAGTGTCGAGATCCCTT-GTGATGATGGAAC 2027
Query 1992 GCGAAAAGCCTGGTTCTTCTGAAGCTTTTATTGCCAAACTTATCGAACAGTTGGGAAGTA 2051
| |||||||||||||||| |||||||||| ||||||| || || |||| |||||||||
Sbjct 2028 GTGAAAAGCCTGGTTCTTGTGAAGCTTTTGTTGCCAAGCTGATTGAACTTTTGGGAAGTT 2087
Query 2052 CAAATGAAG-TGTCAGTGAAAGAGGTGCAAGACATGGCGATCCGTGTGTTCGCTAAGACA 2110
|||| |||| | || |||||||| |||| || |||||| || |||| || || |||||
Sbjct 2088 CAAAAGAAGCT-TCGGTGAAAGAATTGCACGATATGGCGGTCTGTGTTTTTGCCAAGACC 2146
Query 2111 ATGAACA-ATGATGCAGAGAACAAAA-GAAAGCAAGCTAGCAAAGAATTTAGTTCCAATG 2168
| | | | ||||||||||||||| |||| ||||||| ||| || |||||||||||
Sbjct 2147 AC-ACCCGACAATGCAGAGAACAAAATGAAA-CAAGCTAACAAGGAGTTTAGTTCCAACA 2204
Query 2169 CAAACT-TTAGTCCACTTG-CAAGATTCTTATTCTCAAGATGGCTAGGTCAAACATCGCG 2226
|||| | |||| ||||| | || |||||||| |||||||||||||||| ||| |||| ||
Sbjct 2205 CAAA-TGTTAGCCCACTCGGCA-GATTCTTACTCTCAAGATGGCTAGGCCAATCATCACG 2262
Query 2227 TGATCTT-AA-CCAA-AGT-TGAGACA-CGC-ACAGAAGACAGAA-CATAAGAATGTTGT 2279
||||||| || || | ||||||| | | ||||| || ||| ||| || ||
Sbjct 2263 TGATCTTTAATCCCCCACCCTGAGACAAC-CTACAGA-GATGGAATCAT-----TG--GT 2313
Query 2280 TTGTG-TGTCTTTTACATTGATTTGATGCATTGAATTTTGGTA-TTTATGT 2328
||||| | ||||| | || ||||||||||||| |||||||| |||||||
Sbjct 2314 TTGTGCT-TCTTT-ATTTTC-TTTGATGCATTGATTTTTGGTAATTTATGT 2361
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126420696360
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5