BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474471
Length=2862
Score E
Sequences producing significant alignments: (Bits) Value
AT1G53420.1 | Symbols: | Leucine-rich repeat transmembrane pro... 4294 0.0
AT3G14840.2 | Symbols: | Leucine-rich repeat transmembrane pro... 592 8e-168
> AT1G53420.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:19926626-19931494 REVERSE LENGTH=2862
Length=2862
Score = 4294 bits (2325), Expect = 0.0
Identities = 2692/2871 (94%), Gaps = 18/2871 (1%)
Strand=Plus/Plus
Query 1 ATGTTGTTTATTCAGTTTCTCTTCACTTCCTTCTTGCTATTTCTCTTCTTCCTCTTCGGT 60
|||| ||| | || |||||||||||||||||||| | | |||||||||||| || || |
Sbjct 1 ATGTCGTTAAATCGGTTTCTCTTCACTTCCTTCTCGTTCTTTCTCTTCTTCATCGTCCAT 60
Query 61 TTCGCATCATCTGCAACTTTGCCAACCCAAGAAGGGGAGGCTTTTAAAGTTGCACTAACC 120
|||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 61 TTCGCATCGTCTGCAACTTTGCCAACACAAGAAGGGGAGGCTTTTAAAGTTGTACTAACC 120
Query 121 ACATTGAAAAAGACTAATATTGATTTAAATGCGGATCCATGCGAAGTCTCATCTACTGGA 180
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 121 ACATTGAAAAAGACGAATATTGATTTAAATGTGGATCCATGCGAAGTCTCATCTACTGGA 180
Query 181 AGTGAATGGTCAACCATCAGCAGAAATTTGAAGAGAGAAAATCTTCAAGGGTCTCTTCCC 240
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AATGAATGGTCAACCATCAGCAGAAATTTGAAGAGAGAAAATCTTCAAGGGTCTCTTCCA 240
Query 241 AAAGAGTTTGTGGGACTTCCTTTTCTGCAAAAGATTGATCTCTCAAGAAACTATCTCAAT 300
|||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 241 AAAGAGTTAGTGGGACTTCCTTTACTGCAAGAGATTGATCTCTCAAGAAACTATCTCAAT 300
Query 301 GGTTCCATCCCTCCTGAATGGGGAGTCTTGCCACTTGTCAACATATCGCTTCGT-GGAAA 359
|||||||||||||||||||||||||||||||||||||||||||| | ||||| | |||||
Sbjct 301 GGTTCCATCCCTCCTGAATGGGGAGTCTTGCCACTTGTCAACATTTGGCTTC-TCGGAAA 359
Query 360 CCGATTAACGGGTCCAATCCCTAAGGAATTTGGAAACATTACAACTCTTACTAGCCTTGT 419
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 360 CCGATTAACAGGTCCAATCCCTAAGGAGTTTGGAAACATTACAACTCTTACTAGCCTTGT 419
Query 420 CCTGGAAGCCAATCAACTTTCAGAAGAATTACCTCTTGAGCTCGGGAATCTACCAAACAT 479
| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 420 CTTGGAAGCCAATCAACTTTCAGGAGAATTACCTCTTGAGCTAGGGAATCTACCAAACAT 479
Query 480 TaaaaaaaTGATTCTTAGCTCGAATAACTTCAACGG-AAACATTCCATCTACATTTACAA 538
| || ||||||||||||||||||||||||| || || || ||||||||||||||| |||
Sbjct 480 TCAACAAATGATTCTTAGCTCGAATAACTTTAATGGTGAA-ATTCCATCTACATTTGCAA 538
Query 539 AACTAACCACCTTGAGAGATTTTCATGTATGTGACAACCAGTTTTCAGGAACAATTCCAG 598
|||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||
Sbjct 539 AACTAACCACCTTGAGAGATTTTCGTGTAAGTGACAACCAGTTGTCAGGAACAATTCCAG 598
Query 599 ATTTCATCCAAAAATGGACTAAACTTGAGAAACTGGTTATTCAAGCAAGTGGTTTAGTTG 658
|||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||
Sbjct 599 ATTTCATCCAAAAATGGACTAAGCTTGAGCGACTGTTTATTCAAGCAAGTGGTTTAGTTG 658
Query 659 GACCGATTCCTAGTGCCATTGCTTCTCTCGTAGAGTTAAAAGACTTGAGAATCAGCGATT 718
|||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GACCAATTCCCATTGCCATTGCTTCTCTCGTAGAGTTAAAAGACTTGAGAATCAGCGATT 718
Query 719 TGAATAATGGACCCGAATCTCCCTTTCCACCGTTAAGGAACATAAAAAAGATGGAGACAT 778
|| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 719 TG---AATGGACCCGAATCTCCATTTCCACAGTTAAGGAACATAAAAAAGATGGAGACAT 775
Query 779 TAATTCTGAGGAACTGCAACCTTACAGGAGACTTACCTGCGTATCTTGGAACTATTACCT 838
||||||| ||||||||||| || |||||||||||||||| |||||||||| |||||||
Sbjct 776 TAATTCTTAGGAACTGCAATCTCACAGGAGACTTACCTGATTATCTTGGAAAGATTACCT 835
Query 839 CCTT-AAAGCTCTTAGATCTTAGCTTCAATAAATTAAGTGGAGCCATCCCTAACACTTAT 897
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 CCTTCAAA-TTCTTAGATCTTAGCTTCAATAAATTAAGTGGAGCCATCCCTAACACTTAT 894
Query 898 GTTAATCTTAGCGACGGAGGTTACATATATTTTACAGGAAACATGTTAAATGGGTCGGTT 957
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 895 ATTAATCTTAGAGACGGAGGTTACATATATTTTACAGGAAACATGTTAAACGGGTCGGTT 954
Query 958 CCAAATTGGATGGTAAATAAAGGATATAAAATTGATCTTAGTTACAACAATTTCTCAGTA 1017
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 CCAGATTGGATGGTAAATAAAGGATATAAAATTGATCTTAGTTACAACAATTTCTCAGTA 1014
Query 1018 GATCCAACCAATGCCGTATGCAAG---AATAATGCACTTTCATGCATGAGAAACTACCAG 1074
|||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 1015 GATCCAACCAATGCAGTATGCAAGTACAATAATGTACTTTCATGCATGAGAAACTACCAA 1074
Query 1075 TGTCCTAAAACTTTCAATGGTCTTCATATAAACTGTGGTGGAGATGAAATGTCTATCAAT 1134
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1075 TGTCCTAAAACTTTCAATGCTCTTCATATAAACTGTGGTGGGGATGAAATGTCTATCAAT 1134
Query 1135 GGGACAATATATGAAGCTGATAAGTATGATAGACTGGAGAGTTTATACAAAAGTCGAAAT 1194
||||||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||
Sbjct 1135 GGGACAATATATGAATCTGATAAGTACGATAGACTGGAGAGTTGGTACGAAAGTCGAAAT 1194
Query 1195 GGGTGGTTCTCAAGCAACGTAGGAGTCTTCGTAGACGATAAACATGTTCCCGAGAGAATA 1254
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1195 GGATGGTTCTCAAACAACGTAGGAGTCTTCGTAGACGATAAACATGTTCCCGAGAGAGTA 1254
Query 1255 ACCATCGGGTCTAACTCATCTGAGCTCAATGTGGTAGATTTTGGGCTGTATACGCAAGCT 1314
||||||| |||||||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct 1255 ACCATCGAGTCTAACTCATCCGAGCTCAATGTGGTTGATTTTGGTCTGTATACGCAAGCT 1314
Query 1315 CGAATCTCAGCCATCTCACTCACTTACTATGCATTGTGTTTAGAAAATGGAAATTACAAT 1374
|| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 CGCATATCAGCTATCTCACTCACTTACTATGCATTGTGTTTAGAAAATGGAAATTACAAC 1374
Query 1375 GTTAATCTCCATTTCGCCGAGATTATGTTTAGCGGTAACAACACTTATCAAAGCTTGGGT 1434
||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||
Sbjct 1375 GTTAATCTCCATTTCGCCGAGATTATGTTCAATGGTAACAACAATTATCAAAGCTTGGGT 1434
Query 1435 AGACGGTTTTTCGACATATACATTCAGAGGAAGCTCGAGGTTAAAGATTTCAATATCGCT 1494
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 AGACGGTTTTTCGACATATACATTCAGAGGAAGCTCGAGGTTAAAGATTTCAATATCGCC 1494
Query 1495 GAGGCGGCAAAAGCTGTTGGAAACGTTGTTATTAAGACATTTCCGGTCGAGGTAACAA-A 1553
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct 1495 AAGGAGGCAAAAGATGTTGGAAACGTTGTTATTAAGACATTTCCGGTCGAGATAA-AAGA 1553
Query 1554 CGGAAAGTTGGAGATACAATTGTATTGGGCCGGGAAAGGAACTACAGTCATTCCCAAAAA 1613
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1554 TGGAAAGTTGGAGATACGATTGTATTGGGCCGGGAGAGGAACTACAGTCATTCCCAAAGA 1613
Query 1614 ACGTGTATATGGTCCTCTCATATCTGCTGTATCAGTTGATCCAAAT-TTCAATCCACCAC 1672
|||||| ||||||||||||||||| ||| ||||||| ||| ||| | || |||||| | |
Sbjct 1614 ACGTGTTTATGGTCCTCTCATATCAGCTATATCAGTGGATTCAAGTGTT-AATCCATCTC 1672
Query 1673 CTAGAAATGGTATGAGTACTGGTACTCTCCATGCATTGGTAGTGATGGCATGCATTTTCA 1732
|||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||
Sbjct 1673 CTAGAAATGGTATGAGTACTGGTACTCTCCATACATTGGTAGTGATCTTATCCATTTTCA 1732
Query 1733 TTTTGTTTTC-CGTACTTGGAATTCTATGGAAAAAAGGTTGCTTGAAATCGAAAAGCCAA 1791
|| || |||| |||| |||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct 1733 TTGTG-TTTCTCGTATTTGGAACTCTATGGAAAAAAGGTTACTTGAGATCGAAAAGCCAA 1791
Query 1792 ATGGAAAGAGATTTCAAAAGTTTGGAACTCATGATTGCTTCTTTCTCGTTGAGGCAAATC 1851
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1792 ATGGAAAAAGATTTCAAAAGTTTGGAACTCATGATTGCTTCTTTCTCGTTGAGGCAAATC 1851
Query 1852 AAAATCGCTACAAACAACTTTGATTCTGCAAATAGAATTGGAGAAGGCGGCTTTGGTCCT 1911
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1852 AAAATCGCTACAAACAACTTTGATTCTGCAAATAGGATTGGAGAAGGCGGCTTTGGTCCT 1911
Query 1912 GTATACAAGGGAAAGTTGTCTGATGGAACAATAATCGCGGTGAAACAACTTTCGACAGGA 1971
||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||
Sbjct 1912 GTATACAAGGGAAAGTTATTTGATGGAACAATAATCGCAGTGAAACAACTTTCGACAGGA 1971
Query 1972 TCAAAACAAGGGAACCGCGAGTTCTTGAACGAGATTGGCATGATTTCAGCTCTGCACCAC 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1972 TCAAAACAAGGGAACCGCGAGTTCTTGAACGAGATTGGCATGATTTCAGCTCTGCACCAC 2031
Query 2032 CCGAATCTGGTTAAACTATATGGATGTTGCGTTGAAGGAGACCAGCTTTTGCTAGTCTAT 2091
|| ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct 2032 CCTAATCTGGTTAAACTATATGGATGTTGCGTTGAAGGAGGCCAACTTTTATTAGTCTAT 2091
Query 2092 GAGTTTGTAGAAAACAACAGCCTTGCTAGAGCATTGTTTGGTCCCCAAGAAACTCAGTTG 2151
|||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||
Sbjct 2092 GAGTTTGTAGAAAACAACAGTCTCGCTCGAGCATTGTTTGGTCCTCAAGAAACTCAGTTG 2151
Query 2152 AGATTGGACTGGCCTACAAGACGGAAGATATGTATCGGGGTAGCGAGAGGACTAGCATAT 2211
||||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||
Sbjct 2152 AGATTGGACTGGCCTACAAGACGGAAGATCTGTATCGGAGTGGCGAGAGGGCTAGCATAT 2211
Query 2212 CTACACGAAGAATCGAGGCTAAAGATTGTACATAGAGACATCAAATCCACTAATGTGTTG 2271
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 2212 CTACACGAAGAATCGAGGCTAAAGATTGTACACAGAGACATCAAAGCCACTAATGTGTTG 2271
Query 2272 TTAGACAAAGAACTGAATCCAAAAATATCAGACTTTGGTCTTGCTAAGCTTGATGAAGAG 2331
|||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 2272 CTAGACAAACAACTGAATCCGAAAATATCAGACTTTGGTCTTGCCAAGCTTGATGAAGAG 2331
Query 2332 GACAGCACTCACATTAGCACTCGAATCGCTGGAACATTTGGTTACATGGCTCCAGAGTAC 2391
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2332 GACAGCACTCACATTAGCACTCGAATCGCTGGAACATTTGGTTACATGGCTCCGGAGTAC 2391
Query 2392 GCCATGAGAGGCCATTTGACAGATAAAGCCGATGTTTACAGCTTTGGCATTGTAGCTCTA 2451
||||||||||||||||||||||||||||| || |||||||||||||| || |||||||||
Sbjct 2392 GCCATGAGAGGCCATTTGACAGATAAAGCTGACGTTTACAGCTTTGGTATAGTAGCTCTA 2451
Query 2452 GAGATCGTTCATGGAAGAAGCAATAAAATAGAACGTTGCAAAAACAATACCTTCTATCTT 2511
||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 2452 GAGATTGTTCATGGAAGAAGCAATAAAATAGAACGATCCAAAAACAATACCTTCTATCTT 2511
Query 2512 ATTGACTGGGTGGAGGTTTTGAGGGAGCAGAATAATCTCTTGGAACTGGTGGATCCAAGA 2571
||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct 2512 ATTGACTGGGTGGAGGTTTTGAGAGAGAAGAATAATCTGTTGGAACTGGTGGATCCAAGA 2571
Query 2572 TTAGGATCAGATTACAACAGAGAAGAAGCAATGACAATGATCCAAATTGCGATAATGTGT 2631
|||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2572 CTAGGATCAGAATATAACAGAGAAGAAGCAATGACCATGATCCAAATTGCGATAATGTGT 2631
Query 2632 ACAAGCTCAGAGCCTTGTGTTAGACCGTCAATGTCAGAAGTGGTGAAGATATTGGAAGGT 2691
||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 2632 ACAAGCTCAGAACCTTGTGAGAGACCGTCAATGTCAGAAGTGGTGAAGATGTTAGAAGGT 2691
Query 2692 AAGAAGATAGTGGAGTTGGAGAAGCTTGAGGAAGCTTCAGTCCATAGAGAAACAAAGAGA 2751
|||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 2692 AAGAAGATGGTGGAGGTGGAGAAACTTGAAGAAGCTTCAGTCCATAGAGAAACAAAGAGA 2751
Query 2752 CTTGAAAACATGAACACGATGAAGAAGTATTACGAAATGATAGGGCAAGAGATAAGTACG 2811
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2752 CTTGAAAACATGAACACGATGAAGAAGTACTACGAAATGATAGGGCAAGAGATAAGTACA 2811
Query 2812 AGCATGAGCATGATCATGAGTGATCATAGTGAATCATCAGCAGATCATTAG 2862
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2812 AGCATGAGCATGATCATGAGTGATCGTAGTGAATCATCAGCAGATCATTAG 2862
> AT3G14840.2 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr3:4988107-4994058 FORWARD LENGTH=3394
Length=3394
Score = 592 bits (320), Expect = 8e-168
Identities = 732/929 (79%), Gaps = 36/929 (4%)
Strand=Plus/Plus
Query 1767 AGGTTGCTTGAA-ATCGAAAAGCCAAATGGAAAGAGATTTCAA-AAGTTTGGAACT-CAT 1823
||| ||||| || | | || || || ||||||| ||||||||| || || || | ||
Sbjct 2075 AGGCTGCTT-AAGACCCAAGAGTCAGATGGAAAAAGATTTCAAGAA-CTTAGATTTCCA- 2131
Query 1824 GAT-TGCTTCTTTCTCGTTGAGGCAAATCAAAATCGCTACAAACAACTTTGATTCTGCAA 1882
||| | ||| ||||| ||||||||||||||| | || || | ||||||||| ||||||
Sbjct 2132 GATCAG-TTCGTTCTCCTTGAGGCAAATCAAAGTTGCCACGGATAACTTTGATCCTGCAA 2190
Query 1883 A-TAGAATTGGAGAAGGCGGCTTTGGTCCTGTATACAAGGGAA-AGTTGTCTGATGGAAC 1940
| || || |||||||| || |||||||||||| ||||||||| | || ||||||||||
Sbjct 2191 ACAAG-ATCGGAGAAGGTGGTTTTGGTCCTGTACACAAGGGAATA-ATGACTGATGGAAC 2248
Query 1941 AATAATCGCGGTGAAACAACTTTCGACAGGATCAAAACAAGGGAACCGCGAGTTCTTGAA 2000
||||||||||||| || || ||| || ||||||||||||||| || || ||||| ||
Sbjct 2249 TGTAATCGCGGTGAAGCAGCTATCGGCAAAATCAAAACAAGGGAATCGAGAATTCTTAAA 2308
Query 2001 CGAGATTGGC-ATGATTTCAGCTCTGCACCACCCGA-ATCTGGTTAAACTATATGGATGT 2058
||||||| || |||||||| |||||||| || || | || ||||||||||||||||||||
Sbjct 2309 CGAGATT-GCTATGATTTCGGCTCTGCAGCATCC-ACATTTGGTTAAACTATATGGATGT 2366
Query 2059 TGCGTTGAAGGAGACCAGCTTTTGCTAGTCTATGAGT--TTGTAGAAAACAACAGCCTTG 2116
||||||||||| || ||||| ||||||| || |||| ||| || |||||||| || |
Sbjct 2367 TGCGTTGAAGGTGATCAGCTCCTGCTAGTTTACGAGTACTTG--GAGAACAACAGTCTCG 2424
Query 2117 CTAGAGCAT-TGTTT-GGTCCCCAAGAAACTCAGTTGA-GATTGGACTGGCCTACAAGAC 2173
| |||| | | ||| || || ||||| |||||| | | | | | ||||| | || |
Sbjct 2425 CGCGAGC-TCT-TTTCGGACCTCAAGAGACTCAGAT-ACCACTAAATTGGCCAATGAGGC 2481
Query 2174 GGAAGATATGTATCGGGGTAGCGAGAGGACTAGCATATCTACACGAAGAATCGAGGCTAA 2233
|||||| ||| | || ||||||||||| |||| ||||| ||||| ||||| || || |
Sbjct 2482 AGAAGATTTGTGTTGGAATAGCGAGAGGATTAGCTTATCTCCACGAGGAATCAAGACTCA 2541
Query 2234 AGATTGTACATAGAGACATCAAATCCACTAATGTGTTGTTAGACAAAGAACTGAATCCAA 2293
|||| ||||| |||||||||||| |||||||||| ||| | || || ||||| || ||||
Sbjct 2542 AGATCGTACACAGAGACATCAAAGCCACTAATGTCTTGCTGGATAAGGAACTAAACCCAA 2601
Query 2294 AAATATCAGACTTTGGTCTTGCTAAGCTTGATGAAGAGGACAGCACTCACATTAGCACTC 2353
| || ||||| ||||| |||||||||||||||||||| || | ||| ||||| ||||| |
Sbjct 2602 AGATTTCAGATTTTGGGCTTGCTAAGCTTGATGAAGAAGAAAACACACACATCAGCACAC 2661
Query 2354 GAATCGCTGGAACATTTGGTTACATGGCTCCAGAGTACGCCATGAGAGGCCATTTGACAG 2413
|| |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 2662 GAGTCGCTGGAACATATGGATACATGGCTCCAGAATACGCCATGAGAGGCCATTTGACAG 2721
Query 2414 ATAAAGCCGATGTTTACAGCTTTGGCATTGTAGCTCTAGAGATCGTTCATGGAA-GAAGC 2472
|||||||||| || ||||| |||||| |||| || ||||| |||||||| |||| || ||
Sbjct 2722 ATAAAGCCGACGTCTACAGTTTTGGCGTTGTGGCCCTAGAAATCGTTCACGGAAAGA-GC 2780
Query 2473 AATAAAATAGAACGTTGCAAAAACA-ATACCTTCTATCTTATTGACTGGGTGGAGGTTTT 2531
|| | | ||| | | ||| | |||||||||| ||| ||||||||||| | |||||
Sbjct 2781 AACACGAGCTCACGAT-CTAAAGCTGATACCTTCTACCTTCTTGACTGGGTGCACGTTTT 2839
Query 2532 GAGGGAGCAGAATAATCT-CTTGGAACTGGTGGATCCAAGATTAGGATCAGATTACAACA 2590
||||| || || | ||| |||| || | || |||||||| ||||| ||||||||||||
Sbjct 2840 AAGGGAACAAAACACTCTACTTG-AAGTAGTAGATCCAAGGCTAGGAACAGATTACAACA 2898
Query 2591 GAGAAGAAGCAATGACAATGATCCAAATTGCGATAATGTGTACAAGCTC-AGAGCCTTGT 2649
| |||||||| ||| ||||| || || | ||| | ||||| || || || || |
Sbjct 2899 AACAAGAAGCATTGATGATGATTCAGATAGGGATGCTCTGTACCAG-TCCAGCTCCAGGG 2957
Query 2650 GTTAGACCGTCAATGTCAGAAG-TGGTGA 2677
| |||||| || ||||| || | ||||||
Sbjct 2958 GATAGACCTTCGATGTC-GACGGTGGTGA 2985
Score = 460 bits (249), Expect = 2e-128
Identities = 635/815 (78%), Gaps = 51/815 (6%)
Strand=Plus/Plus
Query 223 CTTCAAGGGTCTCTTCCCAAAGAGT-TTGT-GGGACTTCCTTTTC-TGCAAAAGATTGAT 279
|||||||| |||||||| | ||| | || | |||||||| |||| ||||| || |||||
Sbjct 459 CTTCAAGGATCTCTTCCTACAGA-TCTT-TCAGGACTTCC-TTTCTTGCAAGAGCTTGAT 515
Query 280 CTCTCAAGAAACTATCTCAATGGTTCCATCCCTCCTGAATGGGGAGTCTTGCCACTTGTC 339
|| | |||||||||||||| |||||||| ||||| |||||||||| || ||||| |
Sbjct 516 CTGACTAGAAACTATCTCAACGGTTCCATTCCTCCCGAATGGGGAGCCTCATCACTTCTA 575
Query 340 AACATATCGCTTCGTGGAAACC-GATTAACG-GGTCCAATCCCTAAGGAATTTGGAAACA 397
||||| || || | |||||||| || ||| | ||| ||||||| || ||| ||||||||
Sbjct 576 AACATCTCACTACTTGGAAACCGGA-TAA-GTGGTTCAATCCCAAAAGAACTTGGAAACC 633
Query 398 TTACAACTCTTACTAGCCTTGTCCTGGAAGCCAATCAACTTTCA--GAAGAATTACCTCT 455
||||||| ||| || | |||||| ||||| ||| ||||| ||| |||| | ||||||
Sbjct 634 TTACAACCCTTTCTGGTCTTGTCTTGGAATACAACCAACTCTCAGGGAAG-A-TACCTCC 691
Query 456 TGAGCTCGGGAATCTACCAAACATTaaaaaaaTGATT-CTTAGCTCGAATAACTTCAAC- 513
||||||||||||||||||||| |||||| | || || ||||||||||||||||| | |
Sbjct 692 AGAGCTCGGGAATCTACCAAACCTTAAAAGACTG-TTACTTAGCTCGAATAACTTGAGCG 750
Query 514 GGAAACATTCCATCTACATTTACAAAACTAACCACCTTGAGAGATTTTCATGTA-T-GTG 571
|| || || ||| |||||| | ||||| || || |||| || ||| | ||| | |||
Sbjct 751 GGGAA-ATCCCAAGTACATTCGCCAAACTTACTACGTTGACTGA-TTT-ACGTATTAGTG 807
Query 572 ACAACCAGTTTTCAGGAACAATTCCAGATTTCATCCAAAAATGGACTAA--ACTTGAGAA 629
|||||||||| | || | || |||||||||||||| || |||| || ||| |||||
Sbjct 808 ACAACCAGTTCACTGGTGCTATACCAGATTTCATCCAGAACTGGA--AAGGACTAGAGAA 865
Query 630 ACTGGTTATTCAAGCAAGTGGTTTAGTTGGACCGATTCCTAGTGCCATTGCTTCT-CTCG 688
|||||||||||||||||||||||||||||||||||||||||||||||||| | || || |
Sbjct 866 ACTGGTTATTCAAGCAAGTGGTTTAGTTGGACCGATTCCTAGTGCCATTGGT-CTTCTGG 924
Query 689 TAGAG-TTAAAAGACTTGAGAATCAGC-GATTTGAATAATGGACCCGAATCTCCCTTTCC 746
| | || | |||||||||||||| | || |||| | ||||| |||||||| |||||
Sbjct 925 GA-ACCTTGACAGACTTGAGAATCA-CTGACTTGAGT---GGACCTGAATCTCCATTTCC 979
Query 747 ACCGTTAAGGAACATAAAAAAGATGGAGACATTA-ATTCTGAGGAACTGCAACCTTACAG 805
|| |||| ||||| | | |||| || ||| ||||| |||||||| ||||||||||
Sbjct 980 GCCACTAAGAAACATGACATCGATGAAGT-ATTTGATTCTTAGGAACTGTAACCTTACAG 1038
Query 806 GAGACTTACCTGCGTATCTTGGA-ACTATTACCTCCTTAAAGC-TCTTAGATCTTAGCTT 863
||||||||||||||||||||||| | || | |||||| ||| ||||||||||||
Sbjct 1039 GAGACTTACCTGCGTATCTTGGACAGAAT-AGAAAATTAAAGAATCT-AGATCTTAGCTT 1096
Query 864 CAATAAATTAAGTGGAGCCA-TCCCTAAC-ACTTATGTTAA-TCTTAGC-GACGGAGGTT 919
|| ||| | |||||| ||| |||| | | || ||| | |||| | || | || ||
Sbjct 1097 TAACAAACTGAGTGGA-CCAATCCC-AGCCACATAT-TCCGGTCTTT-CAGATGTAGATT 1152
Query 920 ACATATATTTTACAGGAAACATGTTAAATGGGTCG-GTTCCAAATTGGATGGTAAATAAA 978
|||||| |||||| | |||||||||||||| | || |||| |||||||||| | ||
Sbjct 1153 TCATATACTTTACAAGTAACATGTTAAATGGA-CAAGTACCAAGTTGGATGGTAGACCAA 1211
Query 979 GGATATAAAATTGATCTTAGTTACAACAATTTCTC 1013
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Sbjct 1212 GGAGACACGATTGATATTACTTACAATAACTTCTC 1246
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 142223283405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5