BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474473
Length=3114
Score E
Sequences producing significant alignments: (Bits) Value
AT1G53440.1 | Symbols: | Leucine-rich repeat transmembrane pro... 4743 0.0
AT1G53430.1 | Symbols: | Leucine-rich repeat transmembrane pro... 4113 0.0
AT1G53450.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 484 2e-135
AT4G00960.1 | Symbols: | Protein kinase superfamily protein | ... 63.9 9e-09
> AT1G53440.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:19945959-19951562 FORWARD LENGTH=3108
Length=3108
Score = 4743 bits (2568), Expect = 0.0
Identities = 2942/3123 (94%), Gaps = 24/3123 (1%)
Strand=Plus/Plus
Query 1 ATGGGTTTCATCTTCTCGACCAAGGAAGTTGTGTATGTTCTTCTTC-TCATCTTCATTGG 59
||||||||| | ||||||||| |||| | | | |||||| || ||||||||||| |
Sbjct 1 ATGGGTTTCTTTTTCTCGACC-CGGAA--AG-G--TCTTCTTC-TCATCATCTTCATTTG 53
Query 60 CTTGGATATTTTCGGATCAAATGCTCAACTGTTGCCAGATGATGAAGTTCAAACACTGCG 119
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||
Sbjct 54 CTTGGATATTTTCGGATCAAATGCTCAACTTTTGCCAGAAGATGAAGTTCAAACATTGCG 113
Query 120 AACGATTTTTAGAAAGCTTCAAAACCAAACAGTGAACATCGAAAGAACTTCTTGTTCGGA 179
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 114 AACGATCTTTAGAAAGCTTCAAAACCAAACAGTGAACATCGAAAGAACTTCTTGTTTGGA 173
Query 180 C-GAAAACTGGAACTTTGTTGCCG-GTTCATCGC-CCAACGCT-GTAACCAGTAACATCA 235
| ||||| |||||||||||||||| | ||| | | |||| ||| |||||||||||| |
Sbjct 174 CAGAAAA-TGGAACTTTGTTGCCGAG-TCAAC-CTCCAA-GCTACCAACCAGTAACATTA 229
Query 236 CCTGCGACTGTACTTTTAACGCCAGCTCAGTCTGTCGTGTCACAAGCATACAGCTTAGAG 295
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 230 CCTGCGACTGTACTTTCAACGCCAGCTCAGTCTGTCGTGTCACAAACATACAGCTTAGAG 289
Query 296 GTTTCAATTTGCGAGGAATTTTCCCGCCTGAATTCGGGAACCTCACGCGTCTTACAGAGA 355
|||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct 290 GTTTCAATTTGCGAGGAATTATACCGCCTGAATTCGGGAACCTCACACGTCTTACAGAGA 349
Query 356 TAGATCTTATGCTGAACTTTCTCAGTGGGACAATACCTACGACATTGTCCCAAATTCCGC 415
|||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 350 TAGATCTTGTGCTGAACTTTCTCAGTGGAACAATACCTACAACATTGTCTCAAATTCCGC 409
Query 416 TAGAAATCTTGGCAGTAACCGGAAACCGTCTCTCTGGACCATTTCCTCCTCAACTCGGAG 475
| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 410 TTGAAATCTTGGCTGTAACCGGAAACCGACTCTCTGGACCATTTCCTCCTCAGCTCGGAC 469
Query 476 AGATTACTACACTTACTGATGTGGTTATGGAAACTAATTTATTCACAGGACAACTTCCTT 535
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 470 AGATTACTACACTTACTGATGTGATTATGGAAAGTAATTTATTCACAGGACAACTTCCTC 529
Query 536 CAAACCTAGGGAACTTAAGAAGCTTGAAAAGATTGTTAATCTCTTCAAACAACATCACGG 595
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 530 CAAACCTAGGGAACTTAAGAAGCTTGAAAAGATTGCTAATCTCTTCAAATAACATCACGG 589
Query 596 GTCGGATCCCTGAGTCCTTGAGCAATCTCAAGAATTTGACTGATTTTCGGATTGATGGAA 655
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 590 GTCGGATCCCTGAGTCCTTGAGCAATCTCAAGAATTTGACTAATTTTCGGATTGATGGAA 649
Query 656 ACTATCTTA-CTGGGAAGATACCTGATTTTATTGGAAACTGGACTCGCCTCGATAGGCTA 714
||| || || ||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 650 ACTCTC-TATCTGGGAAGATACCTGATTTTATTGGAAACTGGACTCGGCTCGTTAGGCTA 708
Query 715 GACCTCCAAGGCACATCAATGGAAGGTCCAATTCCAGCTTCGATATCAAACTTGAAAAAC 774
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 709 GACCTCCAAGGCACATCAATGGAAGGTCCTATTCCAGCTTCGATTTCAAACTTGAAAAAC 768
Query 775 CTGACTGAATTGAGGATAACAGATTTGCGTGGACCAACCTCTCCTTTTCCAGA-CTTGCA 833
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||
Sbjct 769 CTGACTGAATTGAGGATAACAGATTTGCGTGGACCAACTTCTCCTTTTCCAGACCTT-CA 827
Query 834 AAATATGACAAATATGGAACGATTGGTACTAAGAAATTGTTTGATAAGGGAACCTATACC 893
||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 828 AAATATGACGAATATGGAAAGATTGGTACTAAGAAACTGTTTGATAAGGGAACCTATACC 887
Query 894 GGAATACATCGGTACTTCCATGAGTAAGCTGAAGTTACTAGATTTAAGCTCAAACATGTT 953
||| ||||||||||||||||||| || | |||||||||||||||||||||||||||||||
Sbjct 888 GGAGTACATCGGTACTTCCATGACTATGTTGAAGTTACTAGATTTAAGCTCAAACATGTT 947
Query 954 AAATGGTACAATTCCAGACACATTTCGGAGTCTG-ACGGCATTCAATTTTATGTATCTTA 1012
|||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |
Sbjct 948 AAATGGTACAATTCCAGACACATTTCGGAGTCTGAAC-GCATTCAACTTTATGTATCTGA 1006
Query 1013 ATAATAACTCGTTGACTGGTCCAGTTCCTCAGTTCA-TCATCAACAGTAAAGAAAACCTC 1071
|||||||||| ||||||||||||||||||||||||| || | | |||||| ||||| |
Sbjct 1007 ATAATAACTCATTGACTGGTCCAGTTCCTCAGTTCATTC-TTGATAGTAAACAAAACATA 1065
Query 1072 GATTTATCTGACAACAATTTCACTCAGCCACCTACTTTAAGCTGTAATCAGCTTGATGTG 1131
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 GATTTATCTTACAACAATTTCACTCAGCCACCTACTTTAAGCTGTAATCAGCTTGATGTT 1125
Query 1132 AACTTGATCTCCAGCTACCCGTCAGTAACCGATAACTCTGTTCAATGGTGCTTGAGAAAG 1191
|||||||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||
Sbjct 1126 AACTTGATCTCCAGCTACCCCTCAGTAACCAATAACTCTGTCCAATGGTGCTTAAGAAAG 1185
Query 1192 GATCTTTCGTGCCCTGCAGACGCACACCATTCTTCCTTGTTCATCAACTGTGGAGGAAAC 1251
|||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1186 GATCTTCCGTGTCCTGGAGACGCACACCATTCTTCCTTGTTCATTAACTGTGGAGGAAAC 1245
Query 1252 CGACTCAAGGTTGATAAAGACGAGTATGCGGATGACTTAAACAAAAGAGGAGCATCAACA 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1246 CGACTCAAGGTTGATAAAGACGAGTATGCGGATGACTTAAACAAAAGAGGAGCATCAACA 1305
Query 1312 TTCTCTTCTGTCTCTGAAAGATGGGGATACAGCAGTTCTGGAGCTTGGTTAGGCAATGAC 1371
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1306 TTCTCTTCTGTCTCTGAAAGATGGGGATACAGTAGTTCTGGAGCTTGGTTAGGCAATGAC 1365
Query 1372 GGTGCCACCTACTTAGCAACAGACACATTTAACTTGATCAATGAATCAACTCCAGAGTAT 1431
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1366 GGTGCCACTTACTTAGCAACAGATACGTTTAACTTGATCAATGAATCAACTCCAGAGTAT 1425
Query 1432 TACAAAACAGCCCGTCTCTCTTCACAATCACTCAAGTACTATGGATTATGCATGAGAAGA 1491
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1426 TACAAAACAGCCCGTCTCGCTTCACAATCACTCAAGTACTATGGACTATGCATGAGAAGA 1485
Query 1492 GGAAGTTACAAAGTGCAGCTCCATTTTGCAGAGATAATGTTCTCGAACGACCAGACTTAT 1551
|||||||||||||| |||||| |||||||||||||||||||||| || || |||||||||
Sbjct 1486 GGAAGTTACAAAGTTCAGCTCTATTTTGCAGAGATAATGTTCTCAAATGATCAGACTTAT 1545
Query 1552 AGTAGCTTAGGGCGACGAGTATTCGACATTTATGTCCAAGGGACTTTGTTGGAGAGGGAC 1611
|||||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||
Sbjct 1546 AGTAGCTTAGGGCGGCGACTATTCGACATTTATGTTCAAGGGATTTTGTTGGAGAGGGAC 1605
Query 1612 TTTAACATAGCAGAGAGAGCAGGTGGAGTTGGTAAACCGTTCCTAAGACAAATTGATGAT 1671
|||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 1606 TTTAACATAGCACAGAGAGCAGGTGGAGTTGGTAAACCGTTCCTAAGGCAAGTTGATGAA 1665
Query 1672 GTTCAAGTGAATGGAAGTACGCTGGAGATTCATTTGAAGTGGTTAGGGAAAGGCACAAAC 1731
||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||
Sbjct 1666 GTTCAAGTGAATGGAAGTACGTTGGAGATTCATTTGAAGTGGACAGGAAAAGGCACAAAC 1725
Query 1732 GTAATACCAACACGAGGTGTTTACGGGCCTCTCATATCCGCTATAACAATCACACCGAAT 1791
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1726 GTAATACCAACAAGAGGTGTTTACGGGCCTCTCATATCCGCTATAACCGTCACACCGAAT 1785
Query 1792 TTCAAGGTTGATACCGGAAAACCATTGTCCAATAAAGCAGTTGCAGGCATTGTAATCGCA 1851
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1786 TTCAAGGTTGATACCGGAAAACCATTGTCCAATGGAGTAGTTGCAGGCATTGTAATCGCA 1845
Query 1852 GCGTGTGCGGCTTTCGGGTTGCTGGTACTTGTAATCCTCTGGCTTACAGGTTACTTAGGT 1911
||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 1846 GCGTGTGTAGCTTTCGGGTTGCTGGTACTTGTAATCCTCAGGCTAACAGGTTACTTAGGT 1905
Query 1912 GGAAAAGAAGTGGATGAAAATGAAGAGCTTCGGGGACTTGATTTGCAGACAGGATCGTTT 1971
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1906 GGAAAAGAAGTGGATGAAAATGAAGAGCTTCGGGGACTCGATTTGCAGACAGGATCGTTC 1965
Query 1972 ACATTGAAACAAATCAAACGTGCGACTAACAACTTTGATCCAGAAAACAAGATTGGCGAA 2031
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1966 ACATTGAAGCAAATCAAACGTGCTACTAACAACTTTGATCCAGAAAACAAGATTGGAGAA 2025
Query 2032 GGAGGATTTGGACCGGTTTATAAGGGTGTTCTCGCTGATGGAATGACCATCGCGGTGAAG 2091
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 2026 GGAGGATTTGGACCGGTTTATAAGGGTGTTCTCGCTGATGGGATGACCATAGCGGTGAAG 2085
Query 2092 CAGCTTTCATCAAAATCTAAGCAAGGAAACAGAGAATTTGTGACTGAGATCGGGATGATC 2151
||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 2086 CAGCTTTCATCGAAATCTAAGCAAGGAAACCGAGAATTTGTGACTGAGATCGGTATGATA 2145
Query 2152 TCTGCGTTGCAACACCCAAATCTTGTGAAGCTTTATGGTTGTTGCATTGAAGGGAAAGAG 2211
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 2146 TCTGCGTTGCAACACCCTAATCTTGTGAAACTTTATGGTTGTTGCATCGAAGGGAAAGAG 2205
Query 2212 CTTTTGCTTGTGTATGAGTACTTAGAGAACAACAGTCTCGCTCGCGCACTCTTTGGCACA 2271
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2206 CTTTTGCTTGTGTATGAATACTTAGAGAACAACAGTCTCGCTCGCGCACTCTTTGGCACA 2265
Query 2272 GAGAAACAGAGACTGCACTTGGATTGGTCAACAAGGAACAAGATATGCTTAGGGATTGCC 2331
|||||||| ||||| |||||||||||||| || ||||||||| ||||| ||||||||||
Sbjct 2266 GAGAAACAAAGACTTCACTTGGATTGGTCCACGAGGAACAAGGTATGCATAGGGATTGCG 2325
Query 2332 AAAGGATTGGCTTATCTACACGAGGAATCAAGGCTGAAGATTGTGCACAGAGACATAAAA 2391
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2326 AAAGGATTGGCTTATCTACACGAGGAATCAAGGCTGAAGATTGTGCACAGAGACATTAAA 2385
Query 2392 GCGACAAATGTGCTTCTTGATCAGTCTCTAAATGCTAAGATCTCTGATTTTGGTCTAGCT 2451
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2386 GCGACAAATGTGCTTCTTGATCTGTCTCTAAATGCTAAGATCTCTGATTTTGGTCTAGCG 2445
Query 2452 AAACTCGACGAAGAAGAGAATACACATATCAGCACAAGGATTGCAGGAACAATAGGTTAC 2511
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2446 AAACTCGATGAAGAAGAGAATACACATATCAGCACAAGGATTGCAGGAACAATAGGTTAC 2505
Query 2512 ATGGCTCCTGAGTATGCAATGAGAGGTTACTTAACAGACAAGGCAGATGTTTACAGCTTC 2571
|||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2506 ATGGCTCCAGAGTATGCAATGAGAGGTTACTTAACAGACAAAGCAGATGTTTATAGCTTC 2565
Query 2572 GGTGTTGTCTGTTTAGAGATTGTTAGCGGAAAGAGCAACACAAATTACAGACCAAAAGAA 2631
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2566 GGTGTAGTCTGTTTAGAGATTGTTAGCGGAAAGAGCAACACAAATTACAGACCAAAAGAA 2625
Query 2632 GAGTTTATTTACCTTCTTGATTGGGCATATGTCTTGCAAGAACAAGGGAGTCTTCTAGAA 2691
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2626 GAGTTTATTTACCTTCTTGACTGGGCATATGTCTTGCAAGAACAAGGGAGTCTTCTAGAA 2685
Query 2692 CTCATGGATCCAGATCTCGGTACAAGCTTTTCGAAGAAAGAAGCGATGAGGATGTTGAAC 2751
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2686 CTCGTGGATCCAGATCTCGGTACAAGCTTTTCGAAGAAAGAAGCAATGAGGATGTTGAAC 2745
Query 2752 ATAGCTTTACTCTGTACGAACCCATCTCCGACATTGAGACCACCAATGTCATCTGTCGTA 2811
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 2746 ATAGCTTTACTCTGTACAAACCCATCTCCAACATTGAGACCACCGATGTCATCTGTTGTA 2805
Query 2812 AGAATGTTGGAAGGAAAAATCAAAGTCCAACCACCACTGGTGAAACGTGAAGCTGATCCA 2871
|| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2806 AGTATGCTACAAGGAAAAATCAAAGTCCAACCACCACTGGTGAAACGTGAAGCTGATCCA 2865
Query 2872 AGTGGTTCAGCTGCAATGAGGTTTAAGGCCTTTGAGCTTTTGTCACAAGACAGCGAGTCA 2931
||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 2866 AGTGGTTCAGCCGCAATGAGGTTTAAGGCCTTAGAGCATTTGTCACAAGACAGCGAGTCA 2925
Query 2932 CAGGTTTCGACCCATACAAGCAACAGAGAACACAAAAGCTCCTCATCGATGGACGGTCCT 2991
|| || || ||| ||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct 2926 CAAGTCTCAACCTATACAAGAAACAAAGAACACAAAAGCTCCTCCTCGATGGACGGTCCT 2985
Query 2992 TGGGTTGATTCTTCCTTCTCTGAGCCTAGCAAAGATGTTAGCCTACAACAGCAAGAAGAA 3051
||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||
Sbjct 2986 TGGGTCGATTCTTCCTTCTCTGATCCGAGCAAAGATGTTAGCCTATTACAGCAAGAAGAA 3045
Query 3052 GGAAATTCATCATCTTCGTCGAGGAGACTGTTAGATGATCTTACCGATGTGGAGATTGAG 3111
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3046 GGAAATTCATCATCTTCGTCGAGGAGACTGTTAGATGATCTTACTGATGTGGAGATTGAG 3105
Query 3112 TAA 3114
|||
Sbjct 3106 TAA 3108
> AT1G53430.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:19935167-19941088 FORWARD LENGTH=3353
Length=3353
Score = 4113 bits (2227), Expect = 0.0
Identities = 2849/3141 (91%), Gaps = 75/3141 (2%)
Strand=Plus/Plus
Query 1 ATGGGTTTCATCTTCTCGACCAAGGAAGTTGTGTATGTTCTTCTTCTCATCTTCATTGGC 60
||||||||||||||||||||| || ||||||||||||||||||||||||||||| || ||
Sbjct 132 ATGGGTTTCATCTTCTCGACCGAGAAAGTTGTGTATGTTCTTCTTCTCATCTTCGTTTGC 191
Query 61 TTGGATATTTTCGGATCAAATGCTCAACTGTTGCCAGATGATGAAGTTCAAACACTGCGA 120
||||| | ||||||||||||||||||||| ||||| || ||||||||||||||| |||||
Sbjct 192 TTGGAAAATTTCGGATCAAATGCTCAACTTTTGCCTGAAGATGAAGTTCAAACATTGCGA 251
Query 121 ACGATTTTTAGAAAGCTTCAAAACCAAACAGTGAACATCGAAAGAACTTCTTGTTCGGAC 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 252 ACGATCTTTAGAAAGCTTCAAAACCAAACAGTGAACATCGAAAGAACTTCTTGTTCGGAC 311
Query 181 GAAAACTGGAACTTTGTTGCCG-GTTCATCGC-CCAACGCTGTAACCAGTAACATCACCT 238
|||||||||||||||||| || | ||| | | ||||| | |||||||||||| ||||
Sbjct 312 CAAAACTGGAACTTTGTTGTCGAG-TCAGC-CTCCAACTCACCAACCAGTAACATTACCT 369
Query 239 GCGACTGTACTTTTAACGCCAGCTCAGTCTGTCGTGTCACAAGCATACAGCTTAGAGGTT 298
||||||||||||| |||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct 370 GCGACTGTACTTTCAACGCCAGCTCAGTCTGTCGTGTCACAAACATACAGCTTAAAAGTT 429
Query 299 TCAATTTGCGAGGAATTTTCCCGCCTGAATTCGGGAACCTCACGCGTCTTAC-AGAGATA 357
||| |||| ||||| ||||||||||| ||||| ||||||||||||||| | |||||||
Sbjct 430 TCAGCTTGCCCGGAATATTCCCGCCTGAGTTCGGAAACCTCACGCGTCTT-CGAGAGATA 488
Query 358 GATCTTAT-GCTGAACTTTCTCAGTGGGACAATACCTACGACATTGTCCCAAATTCCGCT 416
|||||| | || ||||||||||| ||| |||||||||||||||||||| |||||||| ||
Sbjct 489 GATCTT-TCGCGGAACTTTCTCAATGGAACAATACCTACGACATTGTCTCAAATTCCACT 547
Query 417 AGAAATCTTGGCAGTAACCGGAAACCGTCTCTCTGGACCATTTCCTCCTCAACTCGGAGA 476
||||||||| | |||| ||||||||||||||| |||||||||||||||||||| |||||
Sbjct 548 TGAAATCTTGTCTGTAATCGGAAACCGTCTCTCAGGACCATTTCCTCCTCAACTTGGAGA 607
Query 477 GATTACTACACTTACTGATGTG-GTTATGGAAACTAATTTATTCACAGGACAACTTCCTT 535
||||||||||||||||||||| || |||||||||||||||||||||||| |||||| |
Sbjct 608 TATTACTACACTTACTGATGTGAATT-TGGAAACTAATTTATTCACAGGACCACTTCC-T 665
Query 536 C-AAACCTAGGGAACTTAAGAAGCTTGAAAAGATTGTTA-ATCTCT-T-CAAACAACATC 591
| ||||||||||||||||||||||||| ||||| |||| ||||| | |||||||| ||
Sbjct 666 CGAAACCTAGGGAACTTAAGAAGCTTG-AAAGA--GTTACTTCTCTCTGCAAACAACTTC 722
Query 592 ACGGGTCGGATCCCTGAGTCCTTGAGCAATCTCAAGAATTTGACTGATTTTCGGATTGAT 651
||||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct 723 ACGGGTCAAATCCCTGAGTCCTTAAGTAATCTCAAGAATTTGACTGAATTTCGGATTGAT 782
Query 652 GGAAACTATCTTA-CTGGGAAGATACCTGATTTTATTGGAAACTGGACTC-GCCTCGATA 709
||||||| || || ||||||| |||||||||||||||||||||||||||| | || || |
Sbjct 783 GGAAACTCTC-TATCTGGGAAAATACCTGATTTTATTGGAAACTGGACTCTG-CTGGAGA 840
Query 710 GGCTAGACCTCCAAGGCACATCAATGGAAGGTCCAATTCCAGCTTCGATATCAAACTTGA 769
|||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 841 GGCTAGACCTTCAAGGCACATCAATGGAAGGTCCAATTCCACCTTCAATATCAAACTTGA 900
Query 770 AAAACCTGACTGAATTGAGGATAACAGATTTGCGTGGACCAA----CCTCTCCTTTTCCA 825
||| ||||||||||||||||||| |||||||||||| ||| ||| | |||||||
Sbjct 901 CGAACTTGACTGAATTGAGGATAACCGATTTGCGTGGA-CAAGCGGCCTTTTCTTTTCCG 959
Query 826 GACTTGCAAAATATGACAAATATGGAACGATTGGTACTAAGAAATTGTTTGATAAGGGAA 885
||| ||| || || | | || ||| | | | |||| ||| ||| |
Sbjct 960 GACCTGC-GAA-AT--C-TA-AT-GAA--A-----A-T--GAAA-----CGAT-TGGG-A 995
Query 886 CCTATACCGGAATACATCGGTACTTCCATGAGTAAGCTGAAGTTACTAGATTTAAGCTCA 945
||||| ||||||||||| || |||||||||| |||||||| ||||||||||||||||
Sbjct 996 CCTATCCCGGAATACATTGG---TTCCATGAGTGAGCTGAAGACACTAGATTTAAGCTCA 1052
Query 946 AACATGTTAAATGGTACAATTCCAGACACATTTCGGAGTCT-GACGGCATTCAATTTTAT 1004
|||||| ||| ||| |||||| ||||||||||||| ||| || ||||| || |||||
Sbjct 1053 AACATGCTAACCGGTGTAATTCCTGACACATTTCGGAATCTCGA-TGCATTTAACTTTAT 1111
Query 1005 GTATCTT-AATAATAACTCGTTGACTGGTCCAGTTCCTCAGTTCATCATCAACAGTAAAG 1063
|| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1112 GT-TTTTGAATAATAACTCATTGACTGGTCCAGTTCCTCAGTTCATCATCAACAGTAAAG 1170
Query 1064 AAAACCTCGATTTATCTGACAACAATTTCACTCAGCCACCTACTTTAAGCTGTAATCAGC 1123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 AAAACCTAGATTTATCTGACAACAATTTCACTCAGCCACCTACTTTAAGCTGTAATCAGC 1230
Query 1124 TTGATGTGAACTTGATCTCCAGCTACCCGTCAGTAACCGATAACTCTGTTCAATGGTGCT 1183
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1231 TTGATGTGAACTTGATCTCCAGCTACCCTTCAGTAACCGATAACTCTGTTCAATGGTGCT 1290
Query 1184 TGAGAAAGGATCTTTCGTGCCCTGCAGACGC-ACACCATTCTTCCTTGTTCATCAACTGT 1242
||||| ||| |||| | || || | ||| || | || | |||||| ||||||||||||||
Sbjct 1291 TGAGAGAGGGTCTTCCATGTCCAGAAGATGCTAAAC-AGTCTTCCCTGTTCATCAACTGT 1349
Query 1243 GGAGGAAACCGACTCAAGGTTG-ATAAAGACGAGT-ATGCGGATGACTTAAACAAAAGAG 1300
||||||| | |||||||| ||| | |||||| | | || | |||||||| |||| ||||
Sbjct 1350 GGAGGAAGCAGACTCAAGATTGGA-AAAGAC-ACTTATACAGATGACTTGAACAGTAGAG 1407
Query 1301 GAGCA-TCAACATTCTCTTCTGTCTCTGAAAGATGGGGATACAGCAGTTCTGGAGCTTGG 1359
|| || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1408 GA-CAATCAACATTCTCTTCTGTCTCTGAAAGATGGGGATACAGTAGTTCTGGAGTTTGG 1466
Query 1360 TTAGGCAATGACGG-TGCCACCTACTTAGCAACAGACACATTTAACTTGATCAATGAATC 1418
|||||||| || || ||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 1467 TTAGGCAAGGA-GGATGCTGGCTACTTAGCAACAGACAGATTTAACTTGATCAATGGATC 1525
Query 1419 AACTCCAGAGTATTACAAAACAGCCCGTCTCTCTTCACAATCACTCAAGTACTATGGATT 1478
|||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
Sbjct 1526 AACTCCAGAGTATTACAAAACAGCCCGTCTCTCTCCACAGTCACTCAAGTACTATGGACT 1585
Query 1479 ATGCATGAGAAGAGGAAGTTACAAAGTGCAGCTCCATTTTGCAGAGATAATGTTCTCGAA 1538
|||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||
Sbjct 1586 ATGCTTGAGAAGAGGAAGTTACAAACTGCAGCTACATTTTGCAGAGATAATGTTCTCAAA 1645
Query 1539 CGACCAGACTTATAGTAGCTTAGGGCGACGAGTATTCGACATTTATGTCCAAGGGA-CTT 1597
|||||||||| || |||||||||||| ||| |||||||||||||||||||||||| |||
Sbjct 1646 TGACCAGACTTTTAATAGCTTAGGGCGGCGAATATTCGACATTTATGTCCAAGGGAACTT 1705
Query 1598 TGTTGGAGAGGGACTTTAACATAGCAGAGAGAGCAGGTGGAGTTGGTAAACCGTTCCTAA 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1706 -GTTGGAGAGGGACTTTAACATAGCAGAGAGAGCAGGTGGAGTTGGTAAACCGTTCATAA 1764
Query 1658 GACAAATTGATG-ATGTTCAAGTGAATGGAAGTACGCTGGAGATTCATTTGAAGTGGTTA 1716
| |||||||||| | ||||||||||||||||||||| | |||||||||||| ||||| |
Sbjct 1765 GGCAAATTGATGGA-GTTCAAGTGAATGGAAGTACGTTAGAGATTCATTTGCAGTGGACA 1823
Query 1717 GGGAAAGGCACAAACGTAATACCAACACGAGGTGTTTACGGGCCTCTCATATCCGCTATA 1776
||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||
Sbjct 1824 GGGAAAGGCACAAACGTAATACCAACAAGAGGTGTTTACGGGCCTCTCATATCTGCCATA 1883
Query 1777 ACAATCACACCGAATTTCAAGGTTGATACCGGAAAACCATTGTCCAATAAAGCAGTTGCA 1836
|| || ||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1884 ACCATTACACCAAATTTCAAGGTTGATACCGGAAAACCATTGTCCAATGGAGCAGTTGCA 1943
Query 1837 GGCATTGTAATCGCAGCGTGTGCGGCTTTCGGGTTGCTGGTACTTGTAATCCTCTGGCTT 1896
||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||
Sbjct 1944 GGCATTGTAATCGCAGCGTGTGCGGTTTTCGGGTTGCTGGTACTTGTAATCTTGAGGCTT 2003
Query 1897 ACAGGTTACTTAGGTGGAAAAGAAGTGGATGAAAATGAAGAGCTTCGGGGACTTGATTTG 1956
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2004 ACAGGTTACTTAGGTGGAAAAGAAGTAGATGAGAATGAAGAGCTTCGGGGACTTGATTTG 2063
Query 1957 CAGACAGGATCGTTTACATTGAAACAAATCAAACGTGCGACTAACAACTTTGATCCAGAA 2016
|||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct 2064 CAGACAGGATCGTTCACATTGAAACAAATAAAACGTGCTACTAATAACTTTGATCCAGAA 2123
Query 2017 AACAAGATTGGCGAAGGAGGATTTGGACCGGTTTATAAGGGTGTTCTCGCTGATGGAATG 2076
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2124 AACAAGATTGGTGAAGGAGGATTTGGACCGGTTTATAAGGGTGTTCTCGCTGATGGGATG 2183
Query 2077 ACCATCGCGGTGAAGCAGCTTTCATCAAAATCTAAGCAAGGAAACAGAGAATTTGTGACT 2136
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2184 ACCATAGCGGTGAAGCAGCTTTCATCAAAATCTAAGCAAGGAAACCGAGAATTTGTGACT 2243
Query 2137 GAGATCGGGATGATCTCTGCGTTGCAACACCCAAATCTTGTGAAGCTTTATGGTTGTTGC 2196
|||||||| ||||| |||||| |||||||||| ||||||||||| |||||||||||||||
Sbjct 2244 GAGATCGGTATGATATCTGCGCTGCAACACCCTAATCTTGTGAAACTTTATGGTTGTTGC 2303
Query 2197 ATTGAAGGGAAAGAGCTTTTGCTTGTGTATGAGTACTTAGAGAACAACAGTCTCGCTCGC 2256
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2304 ATCGAAGGGAAAGAGCTCTTGCTTGTGTATGAGTACTTAGAGAACAACAGTCTCGCTCGC 2363
Query 2257 GCACTCTTTGGCACAGAGAAACAGAGACTGCACTTGGATTGGTCAACAAGGAACAAGATA 2316
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 2364 GCACTCTTTGGCACAGAGAAACAGAGGCTTCACTTGGATTGGTCAACAAGGAACAAGATT 2423
Query 2317 TGCTTAGGGATTGCCAAAGGATTGGCTTATCTACACGAGGAATCAAGGCTGAAGATTGTG 2376
||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2424 TGCATAGGGATTGCGAAAGGATTGGCCTATCTACACGAGGAATCAAGGCTGAAGATTGTT 2483
Query 2377 CACAGAGACATAAAAGCGACAAATGTGCTTCTTGATCAGTCTCTAAATGCTAAGATCTCT 2436
|| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 2484 CATAGAGACATAAAAGCGACAAATGTGCTTCTTGATCTGTCTCTAAACGCTAAGATCTCT 2543
Query 2437 GATTTTGGTCTAGCTAAACTCGACGAAGAAGAGAATACACATATCAGCACAAGGATTGCA 2496
||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||
Sbjct 2544 GATTTTGGTCTAGCTAAACTCAACGATGACGAGAATACACATATCAGCACAAGGATTGCA 2603
Query 2497 GGAACAATAGGTTACATGGCTCCTGAGTATGCAATGAGAGGTTACTTAACAGACAAGGCA 2556
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2604 GGAACAATAGGTTACATGGCTCCTGAGTATGCAATGAGAGGTTACTTGACAGACAAGGCA 2663
Query 2557 GATGTTTACAGCTTCGGTGTTGTCTGTTTAGAGATTGTTAGCGGAAAGAGCAACACAAAT 2616
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2664 GATGTTTACAGCTTTGGTGTTGTCTGTTTAGAGATTGTTAGTGGAAAGAGCAACACAAAT 2723
Query 2617 TACAGACCAAAAGAAGAGTTTATTTACCTTCTTGATTGGGCATATGTCTTGCAAGAACAA 2676
||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 2724 TACAGACCAAAGGAAGAGTTTGTTTACCTTCTGGATTGGGCATATGTCTTGCAAGAACAA 2783
Query 2677 GGGAGTCTTCTAGAACTCATGGATCCAGATCTCGGTACAAGCTTTTCGAAGAAAGAAGCG 2736
|| ||||||||||||||| | ||||| |||||||| ||||||||||||||||||||||||
Sbjct 2784 GGTAGTCTTCTAGAACTCGTTGATCCGGATCTCGGCACAAGCTTTTCGAAGAAAGAAGCG 2843
Query 2737 ATGAGGATGTTGAACATAGCTTTACTCTGTACGAACCCATCTCCGACATTGAGACCACCA 2796
|||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 2844 ATGAGGATGTTGAACATAGCATTACTCTGCACGAACCCATCTCCAACATTGAGACCACCA 2903
Query 2797 ATGTCATCTGTCGTAAGAATGTTGGAAGGAAAAATCAAAGTCCAACCACCACTGGTGAAA 2856
||||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 2904 ATGTCATCTGTTGTAAGTATGTTAGAAGGAAAAATCAAAGTCCAACCACCATTGGTGAAA 2963
Query 2857 CGTGAAGCTGATCCAAGTGGTTCAGCTGCAATGAGGTTTAAGGCCTTTGAGCTTTTGTCA 2916
|||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 2964 CGTGAAGCAGATCCAAGTGGTTCAGCAGCAATGAGGTTTAAGGCCTTAGAGCTTTTGTCA 3023
Query 2917 CAAGACAGCGAGTCACAGGTTTCGACCCATACAAGCAACAGAGAACAC-A-A-AAGCTCC 2973
|||||||| |||||||| || ||||| || |||| |||||||| || | | |||||||
Sbjct 3024 CAAGACAGTGAGTCACAAGTCTCGACATATGCAAGAAACAGAGAGCAAGACATAAGCTCC 3083
Query 2974 TCATCGATGGACGGTCCTTGGGTTGATTCTTCCTTCTCTGAGCCTAGCAAAGATGTTAGC 3033
||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||
Sbjct 3084 TCATCGATGGACGGTCCTTGGGTAGATTCTTCCTTCTCTGAGCCTGGGAAAGATGTTAGC 3143
Query 3034 CTACAACAGCAAGAAGAAGGAAATTCATCATCTTCGTCGAGGAGACTGTTAGATGATCTT 3093
|| |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||
Sbjct 3144 CTGCAACAGCAAGAAGAAGGACGTTCATCATCTTCGTCGAGGAAACTTTTAGATGATCTT 3203
Query 3094 ACCGATGTGGAGATTGAGTAA 3114
||||||||| |||||||||||
Sbjct 3204 ACCGATGTGAAGATTGAGTAA 3224
> AT1G53450.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G14830.2);
Has 71 Blast hits to 71 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19951235-19954115
REVERSE LENGTH=2150
Length=2150
Score = 484 bits (262), Expect = 2e-135
Identities = 306/328 (93%), Gaps = 0/328 (0%)
Strand=Plus/Minus
Query 2787 GAGACCACCAATGTCATCTGTCGTAAGAATGTTGGAAGGAAAAATCAAAGTCCAACCACC 2846
||||||||| ||||||||||| ||||| ||| | |||||||||||||||||||||||||
Sbjct 2150 GAGACCACCGATGTCATCTGTTGTAAGTATGCTACAAGGAAAAATCAAAGTCCAACCACC 2091
Query 2847 ACTGGTGAAACGTGAAGCTGATCCAAGTGGTTCAGCTGCAATGAGGTTTAAGGCCTTTGA 2906
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2090 ACTGGTGAAACGTGAAGCTGATCCAAGTGGTTCAGCCGCAATGAGGTTTAAGGCCTTAGA 2031
Query 2907 GCTTTTGTCACAAGACAGCGAGTCACAGGTTTCGACCCATACAAGCAACAGAGAACACAA 2966
|| |||||||||||||||||||||||| || || ||| ||||||| |||| |||||||||
Sbjct 2030 GCATTTGTCACAAGACAGCGAGTCACAAGTCTCAACCTATACAAGAAACAAAGAACACAA 1971
Query 2967 AAGCTCCTCATCGATGGACGGTCCTTGGGTTGATTCTTCCTTCTCTGAGCCTAGCAAAGA 3026
||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct 1970 AAGCTCCTCCTCGATGGACGGTCCTTGGGTCGATTCTTCCTTCTCTGATCCGAGCAAAGA 1911
Query 3027 TGTTAGCCTACAACAGCAAGAAGAAGGAAATTCATCATCTTCGTCGAGGAGACTGTTAGA 3086
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1910 TGTTAGCCTATTACAGCAAGAAGAAGGAAATTCATCATCTTCGTCGAGGAGACTGTTAGA 1851
Query 3087 TGATCTTACCGATGTGGAGATTGAGTAA 3114
||||||||| ||||||||||||||||||
Sbjct 1850 TGATCTTACTGATGTGGAGATTGAGTAA 1823
> AT4G00960.1 | Symbols: | Protein kinase superfamily protein
| chr4:414361-416180 FORWARD LENGTH=1119
Length=1119
Score = 63.9 bits (34), Expect = 9e-09
Identities = 41/44 (93%), Gaps = 2/44 (5%)
Strand=Plus/Plus
Query 2492 TTGCAGGAACAATA-GGTTACATGGCTCCTGAGTATGCAATGAG 2534
|||||||||| || |||||||||||||||||||||||||||||
Sbjct 638 TTGCAGGAAC-TTACGGTTACATGGCTCCTGAGTATGCAATGAG 680
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154865353041
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5