BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474479
Length=2378
Score E
Sequences producing significant alignments: (Bits) Value
AT1G53510.1 | Symbols: ATMPK18, MPK18 | mitogen-activated prote... 3607 0.0
AT3G14720.1 | Symbols: ATMPK19, MPK19 | MAP kinase 19 | chr3:49... 1530 0.0
AT4G01595.1 | Symbols: | Protein kinase superfamily protein | ... 459 7e-128
AT4G01593.1 | Symbols: | other RNA | chr4:690710-692169 FORWAR... 246 6e-64
> AT1G53510.1 | Symbols: ATMPK18, MPK18 | mitogen-activated protein
kinase 18 | chr1:19970664-19974393 REVERSE LENGTH=2380
Length=2380
Score = 3607 bits (1953), Expect = 0.0
Identities = 2258/2400 (94%), Gaps = 42/2400 (2%)
Strand=Plus/Plus
Query 1 ATTTTTATTCAAATTTAGAAAAAATATCTCAAATTCGGTATTTTTAAAATCctctctcgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATTTTTATTCAAATTTAGAAAAAATATCTCAAATTCGGTATTTTTAAAATCCTCTCTCG- 59
Query 61 cttcttcttcttcttcgatcgctggatctaggttttgttcttctctctatc-ac-tc-t- 116
||||||||||||||||||||||||||||||||||| |||||||| |||| | || |
Sbjct 60 --TCTTCTTCTTCTTCGATCGCTGGATCTAGGTTTTGCTCTTCTCTGTATCGTCTTCTTC 117
Query 117 ATC-GTCT--TCTTCA--CAGA-CTGGGCTTG-ATT-GGATTCTTAGCAATCTAGG---- 164
| | | || ||| | || | || | || |||||||||||||||||||
Sbjct 118 A-CAGACTGGGCTTGATTTTGAGTTCTTCTAGTTTTCGGATTCTTAGCAATCTAGGTTTT 176
Query 165 GCttttttttttCCTTTT-GAAAACCCGATCCAGATTTTATTA-AAtttttttGAAGAAG 222
|||||||||| ||||| ||||| |||||||||||||| | | |||||| |||||||
Sbjct 177 TTTTTTTTTTTTACTTTTCGAAAAGCCGATCCAGATTTT-TGATAATTTTGAAGAAGAAG 235
Query 223 ATGCAACAAAATCAAGTGAAGAAGGGGACGAAAGAGATGGAATTTTTCACAGAGTATGGT 282
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 236 ATGCAACAAAATCAAGTGAAGAAGGGCACGAAAGAGATGGAGTTTTTCACAGAGTATGGT 295
Query 283 GATGCTAATAGATATCGGATTCTGGAAGTTATTGGTAAAGGAAGCTATGGAGTTGTGTGT 342
||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 GATGCAAACAGATATAGGATTCTGGAAGTTATTGGTAAAGGAAGCTATGGAGTTGTGTGT 355
Query 343 GCAGCTATTGATACACATACTGGAGAGAAAGTTGCTATTAAAAAGATTAATGATGTCTTT 402
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 356 GCAGCTATTGATACACATACTGGAGAGAAAGTTGCTATTAAGAAGATTAATGATGTCTTT 415
Query 403 GAACATATCTCTGATGCGCTTCGTATTCTCCGTGAAGTGAAGCTTCTTCGGCTTTTACGG 462
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 GAACATATTTCTGATGCGCTTCGTATTCTCCGTGAAGTGAAGCTTCTTCGGCTTTTACGG 475
Query 463 CATCCAGATATTGTGGAAATCAAAAGCATTATGCTGCCTCCTTCTAAGAGAGAGTTTAAA 522
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 CATCCTGATATTGTGGAGATCAAAAGCATTATGCTGCCTCCTTCTAAGAGAGAGTTTAAA 535
Query 523 GACATTTATGTTGTGTTTGAGCTCATGGAATCAGATCTTCATCAAGTTATTAAAGCTAAT 582
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 GATATCTATGTTGTGTTTGAGCTCATGGAATCAGATCTTCATCAAGTTATTAAAGCTAAT 595
Query 583 GATGATTTGACTCGTGAACACCACCAGTTTTTCCTTTATCAGATGCTTCGTGCTTTAAAG 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 GATGATTTGACTCGTGAACACCACCAGTTTTTCCTTTATCAGATGCTTCGTGCTTTAAAG 655
Query 643 TTCATGCATACTGCTAATGTTTATCATCGTGATCTTAAGCCAAAGAATATACTGGCTAAT 702
||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct 656 TTCATGCATACAGCTAATGTTTATCACCGTGATCTTAAGCCAAAGAATATACTTGCAAAC 715
Query 703 GCAAATTGCAAGTTGAAAGTTTGTGACTTTGGATTGGCTAGAGTAGCGTTTAATGATACT 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 GCAAATTGCAAGTTGAAAGTTTGTGACTTTGGATTGGCTAGAGTAGCGTTTAATGATACT 775
Query 763 CCTACAACAGTCTTTTGGACGGACTATGTTGCCACAAGATGGTATAGAGCACCTGAGCTC 822
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 CCTACGACAGTCTTTTGGACGGACTATGTTGCCACAAGATGGTATAGAGCACCTGAGCTC 835
Query 823 TGTGGATCATTCTTTTCGAAGTACACTCCAGCTATCGACATTTGGAGCATTGGCTGCATC 882
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 836 TGTGGATCATTCTTTTCGAAGTACACTCCAGCTATCGACGTTTGGAGCATTGGCTGCATC 895
Query 883 TTTGCAGAGGTACTTACAGGGAAGCCATTGTTTCCAGGAAAAAGTGTCGTCCATCAGTTG 942
|||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 896 TTTGCAGAGGTACTAACAGGGAAGCCATTGTTTCCGGGAAAAAGTGTTGTCCATCAGTTG 955
Query 943 GAGTTGATTACTGATCTTCTTGGCACACCAAAATCAGAAACAATTTCTGGAGTTCGAAAT 1002
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 956 GAGTTGATTACTGATCTTCTTGGCACACCAAAATCAGAAACAATTTCTGGAGTTCGTAAT 1015
Query 1003 GATAAAGCTAGAAAATACTTGACCGAAATGAGGAAGAAAAATCCTGTCACCTTCTCGCAA 1062
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1016 GATAAAGCTAGAAAATACTTGACTGAAATGAGGAAGAAAAATCCTGTCACCTTCTCGCAA 1075
Query 1063 AAATTCTCCAAAGCAGATCCATTAGCACTCCGTCTTTTGCAGAGGCTGTTGGCTTTCGAT 1122
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 AAATTTTCCAAAGCAGATCCATTAGCACTCCGTCTTTTGCAGAGGCTGTTGGCTTTCGAT 1135
Query 1123 CCAAAGGATCGACCGACTCCTGCAGAGGCATTGGCTGATCCTTACTTCAAGGGTCTTTCT 1182
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1136 CCAAAGGATCGACCGACTCCTGCAGAGGCATTAGCTGATCCTTACTTCAAGGGTCTTTCT 1195
Query 1183 AAGGTTGAAAGAGAACCTTCAAGTCAGCCAATCTCGAAGATGGAGTTTGAATTTGAGAGA 1242
||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1196 AAGATTGAAAGAGAACCTTCAAGTCAGCAAATCTCGAAAATGGAGTTTGAATTTGAGAGG 1255
Query 1243 CGAAGGTTGACAAAGGACGACATTAGAGAACTAATATACAGAGAAATCCTGGAATACCAT 1302
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1256 CGAAGGTTGACAAAGGACGACATTAGAGAACTAATATACAGAGAAATACTGGAGTACCAT 1315
Query 1303 CCTCAGTTGCTCAAGGATTATATGAGCGGATCTGAGGGGTCTAATTTTGTATATCCTAGC 1362
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 CCTCAGTTGCTCAAGGACTATATGAGCGGATCTGAGGGGTCTAATTTTGTATATCCTAGC 1375
Query 1363 GCCATTGGACATCTTAGACAGCAGTTCACTTACTTAGAGGAAAATAGTAGCAGAAATGGG 1422
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1376 GCCATTGGACATCTTAGACAGCAGTTCACTTACTTAGAGGAAAATAGCAGTAGAAATGGG 1435
Query 1423 CCGGTCATACCTCTCGAGAGGAAACATGCATCGCTTCCGCGGTCTACGGTTCACTCAACT 1482
|||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct 1436 CCGGTCATACCTCTCGAGAGGAAACACGCATCACTACCGCGGTCTACGGTTCACTCAACT 1495
Query 1483 GTAGTCCATTCCACCACACAACCCAACTTGAGTGCAACAGATAGTAGACGTGTTACTTTC 1542
||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1496 GTAGTCCATTCCACCTCGCAACCCAACTTGGGTGCAACAGATAGTAGACGTGTTTCTTTC 1555
Query 1543 GAGCCTTCAAAAAATGGAG-TTCCTTCTGCAGGACATCCATCAACTTCCGCGTATCCTAC 1601
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1556 GAGCCTTCAAAAAATGGAGCTTC-TTCTGCAGGACATCCATCAACTTCCGCGTATCCTAC 1614
Query 1602 TAAATCTATCGGACCTCCACCAAGGGTTCCACCATCAGGTAGACCAGGTCGAGTTGTGGA 1661
|||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1615 TAAATCCATCGGACCTCCACCAAGAGTTCCACCATCAGGTAGACCAGGTCGTGTTGTGGA 1674
Query 1662 ATCATCTGTATCTTATGAGAATGGCAGGAACCTCAAAGAAGCTTATTTCAGAAGCGCGGT 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 ATCATCTGTATCTTATGAGAATGGCAGGAACCTCAAAGAAGCTTATTTCAGAAGCGCGGT 1734
Query 1722 TTCATCTCCTCATTGCTACTTCCGAGCAAACACCATGACGAACCCAGAGAACCGCAACGT 1781
||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| |
Sbjct 1735 TTCATCTCCTCATTGCTACTTCCGACCAAACACCATGACAAACCCGGAGAACCGCAACAT 1794
Query 1782 AGAGGCTTCGTCTTTTCCGCCAAAACCACAAAATCCTGTCCACCAATTC-GTTCCCACCG 1840
||| |||||||||||||| ||||| |||||||||||||||||||||||| || ||||| |
Sbjct 1795 AGAAGCTTCGTCTTTTCCACCAAAGCCACAAAATCCTGTCCACCAATTCAGT-CCCACTG 1853
Query 1841 AGCCGCCAGCTGCTACAACTAACCAAACAGACGCTGAGACTATGAACCACCCAAACCCTT 1900
|||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 1854 AGCCACCAGCTGCTACAACTAACCAAGCAGACGTTGAGACTATGAACCACCCAAACCCTT 1913
Query 1901 ACTTTCAACCACAGCTCCCCAATATAGATCAACTAAACAACAACAACACACATATGGCCA 1960
||||||||||||||||||| || | ||||||| |||||||||||| |||| ||||||||
Sbjct 1914 ACTTTCAACCACAGCTCCCGAAGACAGATCAATTAAACAACAACA-CACA--TATGGCCA 1970
Query 1961 TTGATGCTAAGCTGTTACAGGCACAATCACAGTTTGGTCCAGCTGGAGCTGCAGCAGTTG 2020
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1971 TTGATGCTAAGCTGTTGCAGGCACAATCACAGTTTGGTCCAGCAGGAGCTGCAGCGGTTG 2030
Query 2021 CAGTAGCAGCACACCGGAACATAGGCACAATTAGTTACGGCGCAGCATCATAGACAACAC 2080
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2031 CAGTAGCAGCACACCGGAACATAGGCACAATTAGTTACAGCGCAGCATCATAGACAACAC 2090
Query 2081 TTCAGACA-AGTCTTTAACCTCCACATCTTCCTCCAGGTGATTCTGGTTTCTCTCTAGTT 2139
|||||||| | ||||||||| ||||||||||||||| | | | || |||| ||||
Sbjct 2091 TTCAGACAGA-TCTTTAACCACCACATCTTCCTCCACCAGGT---GATT-CTCT--AGTT 2143
Query 2140 TTTATGTAAGTATTATTATTCAGTC-AGGCTCTGATTTGAACTTCGTTGCAATAATATGA 2198
||||||||||||||||| ||||| |||||||||| |||||| ||||||||| |||| |
Sbjct 2144 TTTATGTAAGTATTATT---CAGTCCAGGCTCTGATATGAACTACGTTGCAATGATATAA 2200
Query 2199 TAAAGACTTTTATTTAGTTGTAACTCTCCAGAACAAGATCGCCTTGGATTAGTCTGATTG 2258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2201 GAAAGACTTTTATTTAGTTGTAACTCTCCAGAACAAGATCGCCTTGGATTAGTCTGATTG 2260
Query 2259 CGGGTCAGCCCCGGTTATTGTTTCAGTTATCTTGTTGGCTCCATAATCTTTGAATTTTCC 2318
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 2261 CGGGTCAGTCCCGGTTATTGTTTCGGTTATCTTGTTGGCTCCATAATCTTTGAATTTGCC 2320
Query 2319 ATAAGCGTAGTTCACAGTAGAGAAGAATATCGTGGTGATTATATACTTCTTAAACTTCTT 2378
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2321 ATAAGCGTAGTTCACCGTAGAGAAGAATATCGTGGTGATTATATACTTCTTAAACTTCTT 2380
> AT3G14720.1 | Symbols: ATMPK19, MPK19 | MAP kinase 19 | chr3:4945601-4949042
FORWARD LENGTH=2389
Length=2389
Score = 1530 bits (828), Expect = 0.0
Identities = 1291/1511 (85%), Gaps = 45/1511 (3%)
Strand=Plus/Plus
Query 204 TTAAAttt-ttttGAAGAAGATGCAACAAAA-TCAAGTGAAGAAGGGGACGAAAGAGATG 261
|||||||| |||||||| ||||||| |||| ||| | ||||||| | ||||||||||
Sbjct 437 TTAAATTTGATTTGAAGAGGATGCAA-AAAACTCAGGAGAAGAAGAACATGAAAGAGATG 495
Query 262 GAATTTTTCACAGAGTATGGTGATGCTAATAGATATCGGATTCTGGAAGTTATTGGTAAA 321
|| |||||||| |||||||||||||||||| | ||||||||||| ||||||||||| |||
Sbjct 496 GAGTTTTTCACTGAGTATGGTGATGCTAATCGTTATCGGATTCTTGAAGTTATTGGGAAA 555
Query 322 GGAAGCTATGGAGTTGTGTGTGCAGCTATTGATACACATACTGGAGAGAAAGTTGCTATT 381
||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct 556 GGAAGCTATGGAGTTGTATGTGCAGCTATTGATACACAAACAGGAGAGAAAGTTGCTATT 615
Query 382 AAAAAGATTAATGATGTCTTTGAACATATCTCTGATGCGCTTCGTATTCTCCGTGAAGTG 441
|| |||||||||||||| ||||| ||| |||||||||| ||||||||||||||||| ||
Sbjct 616 AAGAAGATTAATGATGTTTTTGAGCATGTCTCTGATGCTCTTCGTATTCTCCGTGAGGTT 675
Query 442 AAGCTTCTTCGGCTT-TTACGGCATCCAGATATTGTGGAAATCAAAAGCATTATGCTGCC 500
|||||||| |||||| ||| |||| || ||||| || ||||||||||| || ||||| ||
Sbjct 676 AAGCTTCTACGGCTTCTTA-GGCACCCTGATATAGTTGAAATCAAAAGTATCATGCTTCC 734
Query 501 TCCTTCTAAGAGAGAGTTTAAAGACATTTATGTTGTGTTTGAGCTCATGGAATCAGATCT 560
||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct 735 GCCTTCTAAGAGGGAGTTTAAAGATATATATGTTGTTTTTGAGCTCATGGAATCAGATCT 794
Query 561 TCATCAAGTTATTAAAGCTAATGATGATTTGACTCGTGAACACCACCAGTTTTTCCTTTA 620
||||||||| || |||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct 795 TCATCAAGTCATCAAAGCTAATGATGATTTGACTCGTGAGCATCACCAGTTTTTTCTTTA 854
Query 621 TCAGATGCTTCGTGCTTTAAAGT-TCATGCATACTGCTAATGTTTATCATCGTGATCTTA 679
|||||||||||||||||| |||| | |||||||| ||||||||||| |||||||||||||
Sbjct 855 TCAGATGCTTCGTGCTTTGAAGTAT-ATGCATACAGCTAATGTTTACCATCGTGATCTTA 913
Query 680 AGCCAAAGAATATACTGGCTAATGCAAATTGCAAGTTGAAAGTTTGTGACTTTGGA-TTG 738
| || ||||| |||||||| |||||||| |||||||||||||| |||||||||||| |||
Sbjct 914 AACCCAAGAACATACTGGCAAATGCAAACTGCAAGTTGAAAGTCTGTGACTTTGGACTTG 973
Query 739 GCTAGAGTAG-CGTTTAATGATACTCCTACAACAGTCTTTTGGACGGACTATGTTGCCAC 797
| ||||| | ||||||||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct 974 -CAAGAGT-GTCGTTTAATGATACACCTACGACAGTCTTTTGGACGGATTATGTTGCCAC 1031
Query 798 AAGATGGTATAGAGCACCTGAGCTCTGTGGATCATTCTTTTCGAAGTACACTCCAGCTAT 857
||||||||| || ||||||||||||||||||||||||| ||| ||||| |||||||| ||
Sbjct 1032 AAGATGGTACAGGGCACCTGAGCTCTGTGGATCATTCTGTTCTAAGTATACTCCAGCAAT 1091
Query 858 CGACATTTGGAGCATTGGCTGCATCTTTGCAGAGGTACTTA-CAGGGAAGCCATTGTTTC 916
|||||||||||||||||||||||||| || |||||| ||| |||||||||| |||||||
Sbjct 1092 TGACATTTGGAGCATTGGCTGCATCTTCGCTGAGGTA-TTAACAGGGAAGCCTTTGTTTC 1150
Query 917 CAGGAAAAAGTGTCGTCCATCAGTTGGAGTTGATTACTGATCTTCTTGGCACACCAAAAT 976
||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct 1151 CAGGAAAAAGTGTTGTCCATCAGTTAGACTTGATTACCGATCTTCTTGGCACACCAAAAT 1210
Query 977 CAGAAACAATTTCTGGAGTTCGAAATGATAAAG-CTAGAAAATACTTGACCGAAATGAGG 1035
|||| || ||| |||| || |||||||| |||| |||||||||| |||| ||||||||||
Sbjct 1211 CAGAGACCATTGCTGGGGTGCGAAATGA-AAAGGCTAGAAAATATTTGAACGAAATGAGG 1269
Query 1036 AAGAAAAATCCTGTCACCTTCTCGCAAAAATTCTCCAAA-GCAGATCCATTAGCACTCCG 1094
|||||||||| |||| |||| |||||||| || ||| || |||||||| |||||| | ||
Sbjct 1270 AAGAAAAATCTTGTCCCCTTTTCGCAAAAGTT-TCCTAACGCAGATCCTTTAGCATTGCG 1328
Query 1095 TCTTTTGCAGAGGCTGTTGGCTTTCGATCCAAAGGATCGACCGACTCCTGCAGAGGCATT 1154
|||| |||| || ||||||||||| |||||||||||| | |||||| |||||||||| |
Sbjct 1329 TCTTCTGCAAAGACTGTTGGCTTTTGATCCAAAGGATAGGCCGACTGCTGCAGAGGCGCT 1388
Query 1155 GGCTGATCCTTACTTCAAGGGTCTTTCTAAGGTTGAAAGAGAACCTTCAAGTCAGCCAAT 1214
|||||||||||| || ||| | ||| ||||||||||||||||||| || ||||||| ||
Sbjct 1389 GGCTGATCCTTATTTTAAGTGCCTTGCTAAGGTTGAAAGAGAACCCTCTTGTCAGCCGAT 1448
Query 1215 CTCGAAGATGGAGTTTGAATTTGAGAGACGAAGGTTGACAAAGGACGACATTAGAGAACT 1274
||||||||||| ||||| ||||| ||| |||||||||||||||| ||||||||||||||
Sbjct 1449 TTCGAAGATGGAATTTGAGTTTGAAAGAAGAAGGTTGACAAAGGATGACATTAGAGAACT 1508
Query 1275 AATATACAGAGAAATCCTGGAATACCATCCTCAGTTGCTCAAGGATTATATGAGCGGATC 1334
||||||||| || || |||||||||||||| ||| |||||||||||||||||| | ||
Sbjct 1509 AATATACAGGGAGATACTGGAATACCATCCACAGCTGCTCAAGGATTATATGAAC---TC 1565
Query 1335 TGAGGGGTCTAA-TTTTGTATATCCTAGCGCCATTGGACATCTT-AG-ACAGCAGTTCAC 1391
||| || || || |||| |||||||||| ||||| || ||| || || | | || || |
Sbjct 1566 TGAAGGCTC-AAGTTTTCTATATCCTAGTGCCATCGGTCAT-TTGAGGAAA-CAATTTGC 1622
Query 1392 TTACTTAGAGGAAAATAGTAGCAGAAA-TGGGCCGGTCATACCTCTC-GAGAGGAAACAT 1449
||| |||||||||||||| ||| ||| |||||| |||||||||| | || ||||| |||
Sbjct 1623 GTACCTAGAGGAAAATAGTGGCA-AAAGTGGGCCAGTCATACCTC-CAGACAGGAAGCAT 1680
Query 1450 GCATCGCTTCCGCGGTCTACGGTTCACTCAACTGTAGTCCATTCCACCACACAACCCAAC 1509
|| || ||||| || ||| | ||||| || | || ||| | |||| | | |||||||
Sbjct 1681 GCTTCACTTCCACGATCTGCAGTTCATTCCAGTGCAGTAAACTCCAACGCTCAACCCAGT 1740
Query 1510 TTGAGTGCAACAGATAGTAGACGTGTTACTTTCGAGCCTTCAAAAAATGGAGTTCCTTCT 1569
|| | ||| |||| ||| |||||||| || |||| ||||||| |||||||||
Sbjct 1741 TTAAACGCATCAGACAGTCGACGTGTTTCTATCGAACCTTCAAGAAATGGAGT------- 1793
Query 1570 GCAGGACATCCATCAACTTCCGCGTATCCTACTAAATCTATCGGACCTCCACCAAGGGTT 1629
| | |||||||||||| || ||| | |||||| || | || ||||||||||| ||
Sbjct 1794 G--GT---TCCATCAACTTCAGCATATTCAACTAAACCTTTAGGGCCTCCACCAAGAGT- 1847
Query 1630 CCACCATCAGGTAGACCAGGTCGAGTTGTGGAATCATCTGTATCTTATGAGAATGGCAGG 1689
||||||||||| |||||| || |||||||||||||||||| ||||||| |||| |||
Sbjct 1848 --ACCATCAGGTAAACCAGGCCGTGTTGTGGAATCATCTGTAACTTATGAAAATGACAGA 1905
Query 1690 AACCTCAAAGA 1700
|||||||||||
Sbjct 1906 AACCTCAAAGA 1916
> AT4G01595.1 | Symbols: | Protein kinase superfamily protein
| chr4:690726-691993 REVERSE LENGTH=762
Length=762
Score = 459 bits (248), Expect = 7e-128
Identities = 270/281 (96%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 843 GTACACTCCAGCTATCGACATTTGGAGCATTGGCTGCATCTTTGCAGAGGTACTTACAGG 902
||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
Sbjct 142 GTACACTCCAGCTATCGACGTTTGGAGCATTGGCTGCATCTTTGCAGAGGTACTAACATG 201
Query 903 GAAGCCATTGTTTCCAGGAAAAAGTGTCGTCCATCAGTTGGAGTTGATTACTGATCTTCT 962
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 202 GAAGCCATTGTTTCCGGGAAAAAGTGTTGTCCATCAGTTGGAGTTGATTACTGATCTTCT 261
Query 963 TGGCACACCAAAATCAGAAACAATTTCTGGAGTTCGAAATGATAAAGCTAGAAAATACTT 1022
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 262 TGGCACACCAAAATCAGATGCAATTTCTGGAGTTCGTAATGATAAAGCTAGAAAATACTT 321
Query 1023 GACCGAAATGAGGAAGAAAAATCCTGTCACCTTCTCGCAAAAATTCTCCAAAGCAGATCC 1082
||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 322 GACTGAAATGAGGAAGAAAAATCATGTCACCTTCTCGCAAAAATTCTCTAAAGCAGATCC 381
Query 1083 ATTAGCACTCCGTCTTTTGCAGAGGCTGTTGGCTTTCGATC 1123
|||||||||||||||||||||||||||||||||||||||||
Sbjct 382 ATTAGCACTCCGTCTTTTGCAGAGGCTGTTGGCTTTCGATC 422
> AT4G01593.1 | Symbols: | other RNA | chr4:690710-692169 FORWARD
LENGTH=1275
Length=1275
Score = 246 bits (133), Expect = 6e-64
Identities = 147/154 (95%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 842 AGTACACTCCAGCTATCGACATTTGGAGCATTGGCTGCATCTTTGCAGAGGTACTTACAG 901
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 972 AGTACACTCCAGCTATCGACGTTTGGAGCATTGGCTGCATCTTTGCAGAGGTACTAACAT 913
Query 902 GGAAGCCATTGTTTCCAGGAAAAAGTGTCGTCCATCAGTTGGAGTTGATTACTGATCTTC 961
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 912 GGAAGCCATTGTTTCCGGGAAAAAGTGTTGTCCATCAGTTGGAGTTGATTACTGATCTTC 853
Query 962 TTGGCACACCAAAATCAGAAACAATTTCTGGAGT 995
||||||||||||||||||| |||||||||||||
Sbjct 852 TTGGCACACCAAAATCAGATGCAATTTCTGGAGT 819
Score = 219 bits (118), Expect = 1e-55
Identities = 126/130 (97%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 994 GTTCGAAATGATAAAGCTAGAAAATACTTGACCGAAATGAGGAAGAAAAATCCTGTCACC 1053
||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct 732 GTTCGTAATGATAAAGCTAGAAAATACTTGACTGAAATGAGGAAGAAAAATCATGTCACC 673
Query 1054 TTCTCGCAAAAATTCTCCAAAGCAGATCCATTAGCACTCCGTCTTTTGCAGAGGCTGTTG 1113
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 TTCTCGCAAAAATTCTCTAAAGCAGATCCATTAGCACTCCGTCTTTTGCAGAGGCTGTTG 613
Query 1114 GCTTTCGATC 1123
||||||||||
Sbjct 612 GCTTTCGATC 603
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118071681840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5