BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474507
Length=2402
Score E
Sequences producing significant alignments: (Bits) Value
AT1G53730.2 | Symbols: SRF6 | STRUBBELIG-receptor family 6 | ch... 3795 0.0
AT3G14350.1 | Symbols: SRF7 | STRUBBELIG-receptor family 7 | ch... 1498 0.0
> AT1G53730.2 | Symbols: SRF6 | STRUBBELIG-receptor family 6 |
chr1:20061701-20065713 FORWARD LENGTH=2471
Length=2471
Score = 3795 bits (2055), Expect = 0.0
Identities = 2306/2424 (95%), Gaps = 29/2424 (1%)
Strand=Plus/Plus
Query 1 TAGAGAGAGGAAGAAGATGAGGGAGAATTGGGCGGTGGTGGCTCTGTTTACTCTATGCAT 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 55 TAGAGAGAGGAAGAAGATGAGGGAGAATTGGGCGGTGGTGGCTCTGTTTACACTATGCA- 113
Query 61 TGTTGTAGGATTTGAGCTTAGATTCATCCATGGAGCCACAGATGCATCAGACACTTCAGC 120
||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 114 --TTGTAGGGTTTGAGCTTAGATTCATCCATGGAGCTACTGATGCATCAGACACTTCAGC 171
Query 121 ATTGAACACATTGTTCAGTGGTATGCATTCTCCAGCTCAGCTAACACAGTGGACTGCAGC 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 172 ATTGAACACATTGTTCAGTGGTATGCATTCTCCAGCTCAGCTAACACAATGGACTGCAGC 231
Query 181 AGCTGGTGATCCTTGTGGCCAGAATTGGAGAGGCGTAACTTGTTCTGGCTCTCGAGTTAC 240
|||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct 232 AGCTGGTGATCCTTGTGGCCAGAATTGGAGAGGCGTCACTTGTTCCGGCTCACGAGTTAC 291
Query 241 TCAAATAAAGTTATCAGGTCTTGAGCTCTCTGGAACACTTGGAGGATACATGCTTGATAA 300
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 292 TCAAATAAAGTTGTCAGGTCTTGAGCTCTCTGGAACTCTTGGAGGATACATGCTTGATAA 351
Query 301 ATTGACTTCTCTTACCGAGCTTGATCTAAGCAGCAATAATCTTGGAGGTGATTTACCATA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 ATTGACTTCTCTTACCGAGCTTGATCTAAGCAGCAATAATCTTGGAGGTGATTTACCATA 411
Query 361 TCAGTTTCCTCCAAATCTGCAACGATTGTATCTTGCGAATAATCAATTCACTGGAGCTGC 420
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 412 TCAGTTTCCTCCAAATCTGCAACGATTGAACCTTGCGAATAATCAATTCACTGGAGCTGC 471
Query 421 TGCGTACTCAATTTCTCAGATAACAACACTTAAGTATCTAAATCTTGGTCACAATCAGTT 480
| |||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||||||
Sbjct 472 TTCGTACTCACTTTCTCAGATTACACCACTTAAGTATCTCAATCTTGGTCACAATCAGTT 531
Query 481 TAAGGGGCAGATAGCTATCGACTTCACCAAGCTCGACTCTCTCACAACCTTGGACTTCTC 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 532 TAAGGGGCAGATAGCTATCGACTTCTCCAAGCTCGACTCTCTCACAACCTTGGACTTCTC 591
Query 541 TTTCAATTCTTTCACGAACTCTTTACCGGGAACTTTTTCCTCTCTAACTAGTTTAAAATC 600
||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct 592 TTTCAATTCTTTCACGAACTCTTTACCGGCAACGTTTTCCTCTCTAACAAGTTTAAAATC 651
Query 601 ACTATACCTTCAGAACAATCAGTTCTCAGGCACAGTCGATGTCTTAGCCGGTCTTCCTCT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ACTATACCTTCAGAACAATCAGTTCTCAGGCACAGTCGATGTCTTAGCCGGTCTTCCTCT 711
Query 661 TGAGACTCTAAACATTGCAAACAACGACTTCACTGGGTGGATCCCCAGTTCTTTAAAGGG 720
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 712 TGAGACTCTGAACATTGCGAACAATGACTTCACGGGGTGGATCCCCAGTTCTTTAAAGGG 771
Query 721 CATCACATTAATAAAAGACGGCAACTCATTCAATACTGGACCTGCGCCTCCACCACCACC 780
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 772 CATCACATTAATAAAAGATGGCAACTCATTCAATACTGGACCTGCACCTCCACCACCACC 831
Query 781 TGGAACACCTCCAATCCGTGGCTCCCCAAACCGTAAACCCGGAGGACGTGAAAGCCGGTC 840
||| |||||||| |||||||||||||| | ||||||| | ||||||||||||||||||||
Sbjct 832 TGGTACACCTCCTATCCGTGGCTCCCCGAGCCGTAAATCTGGAGGACGTGAAAGCCGGTC 891
Query 841 TAGTGATGATTCCACCAGAAATGGAGATACCAAGAAATCAGGAATCGGAGCTGGTGCAAT 900
||||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||
Sbjct 892 TAGTGATGAGTCCACCAGAAATGGAGATTCCAAGAAATCAGGAATCGGAGCGGGGGCAAT 951
Query 901 TGCAGGCATAATCATTTCATTGTTAGTAGTTACAGCTCTTCTTGTGGCTTTCTTCTTGTT 960
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 952 TGCGGGCATAATCATTTCATTGTTAGTAGTTACAGCTCTTCTTGTTGCTTTCTTCTTGTT 1011
Query 961 CAAAAGaaaaaaaTCAAAGAGGTCATCACCCATGGACATTGAGAAAACCGATAACCAGCC 1020
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 CAGAAGAAAAAAATCAAAGAGGTCATCACCCATGGACATTGAGAAAACCGATAACCAGCC 1071
Query 1021 TTTCACTCTTGCTTCAAACGACTTTCACGAAAACAATTCCATTCAGAGTTCTTCATCAGT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 TTTCACTCTTGCTTCAAACGACTTTCACGAAAACAATTCCATTCAGAGTTCTTCATCAGT 1131
Query 1081 TGAGACAAAGAAGCTGGATACTTCATTGTCTATTAATCTCCGGCCTCCACCAGTTGATAG 1140
|||||||||||| ||||| |||||||||||||||||||| || ||||||||| |||||||
Sbjct 1132 TGAGACAAAGAAACTGGACACTTCATTGTCTATTAATCTTCGACCTCCACCAATTGATAG 1191
Query 1141 AAACAAATCATTTGATGATGAAGATTCGACAAGAAAGCCTAGTACTGTCAAGAAATCCAC 1200
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1192 AAACAAATCATTTGATGATGAAGATTCGACAAGAAAGCCTATTGCTGTCAAGAAATCCAC 1251
Query 1201 GGTGGTGGTTCCTTCACATGTGAGACTCTATTCAGTTGCAGATCTCCAAATTGCTACTGG 1260
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 AGTGGTGGTTCCTTCAAATGTGAGACTCTATTCAGTTGCAGATCTCCAAATTGCTACTGG 1311
Query 1261 CAGTTTTAGCGTAGATAATCTTCTTGGAGAAGGGACTTTTGGACGAGTATACAGAGCTGA 1320
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 CAGTTTCAGCGTAGATAATCTTCTTGGAGAAGGGACTTTTGGACGAGTATACAGAGCTGA 1371
Query 1321 GTTTGATGATGGAAAGGTTCTTGCTGTGAAGAAAATTGATTCGTCTGCTCTTCCACATGG 1380
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1372 GTTTGATGATGGAAAGGTTCTTGCTGTGAAGAAAATTGATTCGTCTGCTCTCCCACATGG 1431
Query 1381 CATGACCGATGATTTCATTGAAATGGTATCGAAAATCGCCAATTTGGATCATCCAAATGT 1440
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1432 CATGACCGATGATTTCATTGAAATGGTATCGAAAATAGCCAATTTGGATCATCCAAATGT 1491
Query 1441 GACCAAGCTTGTTGGTTACTGTGCTGAGCACGGACAACATCTCGTGGTCTATGAATTCCA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 GACCAAGCTTGTTGGTTACTGTGCTGAGCACGGACAACATCTCGTGGTCTATGAATTCCA 1551
Query 1501 CAAAAATGGATCATTACATGACTTCTTACACTTATCAGAAGAGGAAAGTAAAGCATTGGT 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 CAAAAATGGATCATTACATGACTTCTTACACTTATCAGAAGAGGAAAGTAAAGCATTGGT 1611
Query 1561 GTGGAATTCACGAGTCAAGATCGCTCTTGGGACTGCACGCTCATTGGAGTATCTGCATGA 1620
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1612 GTGGAATTCACGAGTCAAGATCGCTCTTGGGACTGCACGCGCATTGGAGTATCTGCATGA 1671
Query 1621 AGTTTGTTCACCATCTATAGTTGACAAGAATATCAAATCAGCCAATATTTTACTCGACTC 1680
|||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct 1672 AGTTTGCTCACCGTCTATAGTGGACAAGAATATCAAATCAGCTAATATTTTACTCGATTC 1731
Query 1681 AGAGCTGAATCCTCACTTATCAGATT-TAGGTCTCGCAAGCTTCCTTCCCACAGCTAATG 1739
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1732 AGAGCTGAATCCTCACTTATCAGATTCT-GGTCTCGCAAGCTTCCTTCCCACAGCTAATG 1790
Query 1740 AGTTACTAAACCAAACCGATGAAGGGTATAGTGCACCTGAAGTATCAATGTCAGGCCAAT 1799
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1791 AGTTATTAAACCAAACCGATGAAGGGTATAGCGCACCTGAAGTATCAATGTCAGGCCAAT 1850
Query 1800 ATTCTTTGAAGAGCGACGTTTACAGTTTTGGAGTAGTGATGCTTGAACTTTTAACCGGGA 1859
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1851 ATTCTTTGAAGAGTGACATTTACAGTTTTGGAGTAGTGATGCTTGAACTTTTAACTGGGA 1910
Query 1860 GAAAACCATTCGACAGCAGCACAAGGTCAAGATCTGAGCAGTCATTGGTTCGATGGGCGA 1919
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1911 GAAAACCATTTGACAGCAGCACAAGGTCAAGATCTGAGCAGTCACTGGTTCGATGGGCGA 1970
Query 1920 CACCCCAA-TTACATGACATTGATGCTTTAGCCAAAATGGTTGATCCAGCTCTTAAAGGG 1978
|||| ||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1971 CACCACAACTT-CACGACATTGATGCTTTAGCCAAAATGGTTGATCCAGCTCTTAAAGGG 2029
Query 1979 CTTTATCCTGTTAAATCTCTGTCTCGGTTTGCAGATGTTATCGCTCTCTGCGTCCAGCCG 2038
||||||||||| ||||| || ||||| ||||||||||||||||||||||| |||||||||
Sbjct 2030 CTTTATCCTGTCAAATCCCTTTCTCGATTTGCAGATGTTATCGCTCTCTGTGTCCAGCCG 2089
Query 2039 GAGCCGGAGTTTAGACCACCAATGTCTGAAGTTGTGCAGGCTCTGGTTGTGTTAGTGCAG 2098
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2090 GAGCCGGAGTTTAGACCACCAATGTCTGAAGTTGTGCAGGCTCTAGTTGTGTTAGTGCAG 2149
Query 2099 AGAGCTAACATGAGCAAGAGAACTGTCGGAGTTGATCCGTCGCAACGTTCTGGTAGTGCG 2158
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 2150 AGAGCTAACATGAGCAAGAGAACTGTCGGAGTTGATCCATCGCAACGTGCTGGTAGTGCC 2209
Query 2159 GAGACAACCAATGATTACATGTAAATTCCTCTCCCAAGAGAAAAGACAAACACTTTGCTC 2218
|| || |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2210 GACACGACCAGTGATTACATGTAAATGCCTCTACCAAGAGAAAAGACAAACACTTTGCTC 2269
Query 2219 CG----A-G--AA--A-A-----TTGGAAGAT-GAAAA--GCACAC-TCACGCATTGTAT 2259
|| | | || | | ||||||||| ||||| ||| || ||| ||||||||
Sbjct 2270 CGTCGGATGTTAATCATAGACAATTGGAAGATAGAAAAAAGCA-ACCTCATACATTGTAT 2328
Query 2260 AATCCCATTGTTTTATTGTAATTGTATGTTCCAAAGTTGTAGCTTCTAGATCCTCTACAT 2319
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 2329 AATCCCATTGTTTTATTGTAATTGTATGTTCCAAAGGTGTAGCTTCTAGATCCTTTACAT 2388
Query 2320 GAACATAATTCTTTCTTGTTTTCTTCTAAATTGGTTCTATTTGGGCTTGGTTCAATTCTT 2379
||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 2389 GAACAAAATTCTTTCTTGTAATCTTCTACATTGGTTCTATTTGGGCTTGGTTCAATTCTT 2448
Query 2380 GATCATCAA-TATGTTATCAATTT 2402
||||||||| | ||||||||||||
Sbjct 2449 GATCATCAACT-TGTTATCAATTT 2471
> AT3G14350.1 | Symbols: SRF7 | STRUBBELIG-receptor family 7 |
chr3:4782757-4787236 REVERSE LENGTH=2749
Length=2749
Score = 1498 bits (811), Expect = 0.0
Identities = 1745/2183 (80%), Gaps = 115/2183 (5%)
Strand=Plus/Plus
Query 7 GAGGAAGAAGATGAGGGAGAATTGGGCGGTGGTGGCTCTG-TT-TACTCTATGCATTGTT 64
|||||||||||||| |||||| ||| ||| |||||||| || ||||| |||||||||
Sbjct 228 GAGGAAGAAGATGACTGAGAATCGGGTGGTTTTGGCTCTGCTTATACTC--TGCATTGTT 285
Query 65 GTAGGATTTGAGCTTAGATTCATCCATGGAGCCACAGATGCATCAGACACTTCAGCATTG 124
| || ||||||| || |||||||||||||| || ||| ||||||| ||||| || ||
Sbjct 286 G--GG-TTTGAGCCAAGTTTCATCCATGGAGCTACGGATTCATCAGATACTTCGGCGTTA 342
Query 125 AACA-CATTGTTCAG-TGGTATGCATTCTCCAGCTCAGCTAACACAGTGGACTGCAGCAG 182
|||| || ||||||| | ||| ||||||||| ||||| |||| ||||| ||| |||
Sbjct 343 AACATCA-TGTTCAGCT-CCATGAATTCTCCAGGACAGCTCTCACAATGGACAGCATCAG 400
Query 183 CTGGTGATCCTTGTGGCCAGAATTGGAGAGGCGTAACTTGTTCTGGCTCTCGAGTTACTC 242
||||||||||||||||| || |||| |||| ||||||| ||||||||||||||||| |
Sbjct 401 GAGGTGATCCTTGTGGCCAAAACTGGAAAGGCATAACTTGCTCTGGCTCTCGAGTTACAC 460
Query 243 AAATAAAGTTATCAGGTCTT-GAGCTCTCTGGAACACTTGGAGGATACATGCTTGATAAA 301
||||||||||| || ||||| || || |||||| ||||| |||| |||||||||||||
Sbjct 461 AAATAAAGTTACCAAGTCTTGGA-CTTTCTGGATCACTT---GGATTCATGCTTGATAAA 516
Query 302 TTGACTTCTCTTACCGAGCTTGATCTAAGCAGCAATAATCTTGGAGGTGATTTACCATAT 361
||||||||| |||| ||| ||||| | |||| |||||| |||||||| ||||| || |||
Sbjct 517 TTGACTTCTGTTACTGAGTTTGATATGAGCAACAATAACCTTGGAGGCGATTTGCCTTAT 576
Query 362 CAGTTTCCTCCAAATC-TGCAACGATTGTATCTTGCGAATAATCAATTCACTGGAGCTGC 420
||| |||||||||| | || | |||||| ||||||| ||||| || ||||||||| ||||
Sbjct 577 CAGCTTCCTCCAAA-CTTGGAGCGATTGAATCTTGCTAATAACCAGTTCACTGGATCTGC 635
Query 421 TGC-GTACTCAATTTCTCA-GATAACAACACTTAAGTATCTAAATCTTGGTCACAATCAG 478
| | || || |||||| | ||| | | |||||||| || || |||| |||||| |||
Sbjct 636 T-CAATATTCCATTTCT-ATGATGGCTCCTCTTAAGTACCTCAACCTTGCTCACAACCAG 693
Query 479 TTTAAGGGGCAGATAGCTATCGACTTCACCAAGCTCGA-CTCTCTCACAACCTTGGACTT 537
|| || |||| ||||||| |||||||| || ||| | ||||||| | | |||||| |
Sbjct 694 TTGAA---GCAGCTAGCTATTGACTTCACAAAACTC-ACCTCTCTCTCTATATTGGACCT 749
Query 538 CTCTTTCAATTCTTTCACGA-ACTCTTTACCGGGA-ACTTTTTCCTCTCTAACTAGTTTA 595
||||| |||| |||| | | ||| | || | |||| | |||||| || ||| |
Sbjct 750 CTCTTCCAATGCTTTTA-TAGGGTCTCT-CCCAAACACTTGTAGCTCTCTTACGAGTGCA 807
Query 596 AAATCACTATACCTTCAGAACAATCAGTTCTCAGGCA-CAGTCGAT-GTCTTAGCCGGTC 653
|||||| | || ||||||||||||||||||||||||| || | ||| || ||||| |
Sbjct 808 AAATCAATTTATCTTCAGAACAATCAGTTCTCAGGCACCA-TTGATATTC-TAGCCACCC 865
Query 654 TTCCTCTTGAGACTCTAAACATTGCAAACAA-CGACTTCACTGGGTGGATCCCCAG-TTC 711
||||||| || | ||| || ||||||||||| || ||||| || ||||| ||| | |||
Sbjct 866 TTCCTCTCGAAAATCTGAATATTGCAAACAATCG-GTTCACAGGCTGGAT-CCCTGATTC 923
Query 712 TTT-AAAGGGCA-TCACATT-AATAAAAGACGGCAACTCATTCAATACTGGACCTGCGCC 768
||| ||| |||| | || || | |||||| ||||| | ||| ||| | || ||||| ||
Sbjct 924 TTTGAAA-GGCATTAAC-TTGCA-AAAAGATGGCAATTTATTAAATTCCGGGCCTGCACC 980
Query 769 TCCACCACCACCTGGAACACCTCCAATCCGT--GGC-TC-CCCAAACCGTAAACCCGGAG 824
||||||||| ||||| ||||| || ||| || | || || | ||| ||| |||| |
Sbjct 981 TCCACCACCTCCTGGTACACCACCGATCAGTAAATCATCACCTACTCCG-AAATCCGG-G 1038
Query 825 GA-CGT-GAAAGCCGGTCTAGTGATGATTCCACCAGAAATGGAGATAC-CAAG-AAATCA 880
| ||| |||| ||| || | || |||||||| || | | | | | || | || ||||||
Sbjct 1039 AACCGTGGAAA-CCGTTCCAATGGTGATTCCAGCA-ATA-GCAAAGACTCCAGCAAATCA 1095
Query 881 GGAATCGGAGCTGGTGCAATTGCAGGCATAATCATTTCATTGTTAGTAGTTACAGCTCTT 940
|| | |||||||||| | | ||||| ||| ||||||| ||| |||| || ||||| |
Sbjct 1096 GGGCTTGGAGCTGGTGGAGTAGCAGGAATAGTCATTTCTTTGATAGTTGTAACAGC-AGT 1154
Query 941 CTTGTGGCTTTCTTCTTGTTCAAAAGaaaaaaaTCAAAGAGGTCATCACCCATGGACATT 1000
| | |||||||||||| |||| ||||||| ||||||| |||||||| ||| |||||||
Sbjct 1155 C--ATAGCTTTCTTCTTGATCAAGAGAAAAAGATCAAAGCGGTCATCATCCACGGACATT 1212
Query 1001 -----GA--GA-AA-ACCGA-TAACC-AGCCTTTCACT-CTTGCTTCAAACGACTTTCA- 1047
|| || || | | | ||||| | || || | | || || || || ||||||||
Sbjct 1213 GAAAAGACTGATAATAAC-ATTAACCAACCCATT-A-TACTAGCGTCCAATGACTTTCAT 1269
Query 1048 C--GAAAACAATTCCATTCAGAGTTCTTCATCAGTTGAGACAAAGAAGCTGGATACTTCA 1105
| || || || || | |||| | | ||| |||||||||||||| |||||||| |||
Sbjct 1270 CAAGAGAATAAGTCTGTACAGAATCCACCATTGGTTGAGACAAAGAAACTGGATACGTCA 1329
Query 1106 TTGTCTATTAATCTCCGGCCTCCACCAGT-TGATAGAAACAAATCATTTGATGATGAAGA 1164
||||| || ||||| || ||||||||| | ||| || | || || |||||||| || ||
Sbjct 1330 TTGTCGATGAATCTACGTCCTCCACCA-TCTGAGCGACATAAGTCGTTTGATGACGATGA 1388
Query 1165 TTCGAC-A--AGAAAGCCTAGTACTGTC-AAGAAATCCACGGTGGTGGTTCCTTCACATG 1220
||| || | ||||| |||| | || | |||||| | | || || ||||||||| |||
Sbjct 1389 TTCAACAATGAGAAAACCTATTGTTG-CAAAGAAAGCTGCTGTTGTTGTTCCTTCAAATG 1447
Query 1221 TGAGACTC-TATTCAGTTGCAGATCTCCAAATTGCTACTGGCAGTTTTAGCGTAGATAAT 1279
||| || | ||| | ||| ||||||| ||| | ||||| |||||| ||||||||||||
Sbjct 1448 TGA-ACACATATACGGTTTCAGATCTTCAAGTAGCTACCAACAGTTTCAGCGTAGATAAT 1506
Query 1280 CTTCTTGGAGAAGGGACTTTTGGACGAGTATACAGAGCTGAGTTTGATGATGGAAAGGTT 1339
||||| || ||||| || |||||| |||||||||||||| ||||||| |||||||||||
Sbjct 1507 CTTCTCGGTGAAGGAACATTTGGAAGAGTATACAGAGCTCAGTTTGAAGATGGAAAGGTA 1566
Query 1340 CTTGCTGTGAAGAAAATTGATTCGTCTGCTCTTCCACATGGCATGAC--C-GATGATTTC 1396
||||||||||||||||| || || ||||| ||||| || || || || | ||||||||
Sbjct 1567 CTTGCTGTGAAGAAAATCGACTCATCTGCGCTTCC-CACGG-AT-ACTGCTGATGATTTT 1623
Query 1397 ATTGAAATGGTATCGAAAATCGC-CAATTTGGATCATC-CAAATGTGACCAAGCTTGTTG 1454
| ||||| ||||||||||| || | |||||||||| | |||||| || ||||||| ||
Sbjct 1624 ACCGAAATTGTATCGAAAATAGCGC-ATTTGGATCA-CGAAAATGTCACAAAGCTTGATG 1681
Query 1455 GTTACTGTGCTGAGCACGGACAACATC-TCGTGGTCTATGAATTCCACAAAAATGGATCA 1513
|||||||| |||| ||||| ||||| | | ||||||||||| ||||| | ||| || |||
Sbjct 1682 GTTACTGTTCTGAACACGGGCAACA-CTTGGTGGTCTATGAGTTCCATAGAAACGGCTCA 1740
Query 1514 TTACATGACTTCTTACA-CTTATCAGAAGAGGAAAGTAAAGCATTGGTGTGGAATTCACG 1572
|| |||||||| ||||| ||| ||||||||||||| ||| | ||| | |||||| | ||
Sbjct 1741 TTGCATGACTTTTTACATCTT-GCAGAAGAGGAAAGCAAACCGTTGATATGGAATCCCCG 1799
Query 1573 AGTCAAGATCGCTCTTGGGACTGCACGCT-CATTGGAGTATC-TGCATGAAGTTTGTTCA 1630
||||||||||||||||| |||||||| | |||||||||| | ||||||||||||| |||
Sbjct 1800 TGTCAAGATCGCTCTTGGCACTGCACG-TGCATTGGAGTA-CTTGCATGAAGTTTGCTCA 1857
Query 1631 CCATCTATAGTTGACAAGAATATCAAATCAGCCAATATTTTACTCGACTCAGAGCTGAAT 1690
||||||||||| ||||||| || |||||||| ||||||||||| |||||||||||||||
Sbjct 1858 CCATCTATAGTCCACAAGAACATTAAATCAGCAAATATTTTACTTGACTCAGAGCTGAAT 1917
Query 1691 CCTCACTTATCAGATTTAGGTCTCGCAAGCTTCCTTCCCACAGCTAATGAGTTACTAAAC 1750
|| ||| | ||||| | ||||||||| |||||||||||||| || || ||| ||||||||
Sbjct 1918 CCACACCTCTCAGACTCAGGTCTCGCTAGCTTCCTTCCCACTGCAAACGAGCTACTAAAC 1977
Query 1751 CAAACCGATGAAGGGTATAGTGCACCTG-AAGTATCAATGTCAGGCCAATATTCTTTGAA 1809
|||| ||||||||| || || ||||| | || | ||||||||||||||||| ||||||||
Sbjct 1978 CAAAACGATGAAGGATACAGCGCACCAGAAACT-TCAATGTCAGGCCAATACTCTTTGAA 2036
Query 1810 GAGCGACGTTTACAGTTTTGGAGTAGTGATGCTTGAACTTTTAACCGGGAGAAAACCATT 1869
|||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||
Sbjct 2037 GAGCGATGTTTACAGTTTTGGAGTAGTGATGCTCGAGCTTTTAACCGGAAGAAAACCATT 2096
Query 1870 CGACAGCAGCACAAGGTCAAGATCTGAGCAGTCATTGGTTCGATGGGCGACACCCCA-AT 1928
|| | |||||||||||||||||| || || |||||||| ||||||| ||||| || |
Sbjct 2097 CG--A-CAGCACAAGGTCAAGATCGGAACAATCATTGGTAAGATGGGCAACACCTCAGCT 2153
Query 1929 TACATGACATTGATGCTTTAGCCAAAATGGTTGATCCAGCTCTTAAAGGGCTTTATCCTG 1988
| || |||||||||||||| | ||||||||||||||||||||| |||||||| || || |
Sbjct 2154 T-CACGACATTGATGCTTTGGGCAAAATGGTTGATCCAGCTCTCAAAGGGCTATACCCGG 2212
Query 1989 TTAAATCTCTGTCTCGGTTTGCAGATGTTATCGCTCTCTGCGTCCAGCCGGAGCCGGAGT 2048
||||||| || || || ||||||||||||||||| || ||||||||||||||||| ||||
Sbjct 2213 TTAAATCCCTCTCCCGATTTGCAGATGTTATCGCCCTTTGCGTCCAGCCGGAGCCAGAGT 2272
Query 2049 TTAGACCACCAATGTCTGAAGTTGTGCAGGC-TCTGGTTGTGTTAGTGCAGAGAGCTAAC 2107
|||||||||| ||||||||||| ||||| || | ||||||| || |||||||||||||||
Sbjct 2273 TTAGACCACCCATGTCTGAAGTGGTGCAAGCAT-TGGTTGTATTGGTGCAGAGAGCTAAC 2331
Query 2108 ATGAGCAAGAGAACTGTCGGAGT 2130
||||||||||||||||| |||||
Sbjct 2332 ATGAGCAAGAGAACTGTTGGAGT 2354
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119276494920
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5