BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474539
Length=2259
Score E
Sequences producing significant alignments: (Bits) Value
AT1G54090.1 | Symbols: ATEXO70D2, EXO70D2 | exocyst subunit exo... 3103 0.0
AT3G14090.1 | Symbols: ATEXO70D3, EXO70D3 | exocyst subunit exo... 1053 0.0
> AT1G54090.1 | Symbols: ATEXO70D2, EXO70D2 | exocyst subunit exo70
family protein D2 | chr1:20189567-20191900 FORWARD LENGTH=2334
Length=2334
Score = 3103 bits (1680), Expect = 0.0
Identities = 2102/2290 (92%), Gaps = 91/2290 (4%)
Strand=Plus/Plus
Query 29 CTTCACCTAAATCTCATTTCAAAGGACCAAACACaaaaaaaaaaCACCTAAATCGATCTG 88
|||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||||
Sbjct 77 CTTCACCTAAATCTCATTTCAAAGGAAC-AA-ACAAAAAGAAAACACCTAAATCGATCTG 134
Query 89 TGAAGTC-AAACACTTTCCAGTTTCCGATTTTTGAATATGGCAACACCGGAGAATCATCA 147
||||||| ||||||||||||||||| || || ||| |||||||||||||||| | | ||
Sbjct 135 TGAAGTCAAAACACTTTCCAGTTTCAGA-TTCTGATTATGGCAACACCGGAG-A-C-TCG 190
Query 148 TGGCGATAG-TTCCGATTTAGAGACAGCGGAGAAGATAATACTCCGTTGGGATTCAACAG 206
||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 191 TGGCG-TTGATTCCGATTTAGAGACAGCGGAGAAGATAATACTCCGGTGGGATTCAACAA 249
Query 207 CATCTGAAGAAGCTAAAGAGAAGAATCTGATTTTCCAAAGCGGTGGTGATCGAGATGAAG 266
|||||||||||||| || || |||||||||||||||||||||||||||||||||| ||||
Sbjct 250 CATCTGAAGAAGCT-AA-AG-AGAATCTGATTTTCCAAAGCGGTGGTGATCGAGAAGAAG 306
Query 267 TAGATCGCTACTTGAAAGCCGTCGATGAACTTCAAAGACACATCTCTTCAATCTCAATCT 326
||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||
Sbjct 307 TAGATCGGTACTTGAAAGCTGTAGATGAAGTTCAAAGACACATCTCTTCAATCTCAATCT 366
Query 327 CCGATGAAGTCAAAGCAGCTAGCTCAACGATTCAAATCGCCATGGCTAGGCTTGAAGACG 386
||||||||||| | | || ||||||||||||||||||||||||| || || ||||
Sbjct 367 CCGATGAAGTC--A--A---AG--CAACGATTCAAATCGCCATGGCTAGACTCGAGGACG 417
Query 387 AGTTCAGAAACATCTTAATCTCACAGACTTCTACTTTCGAACCTGAttctcttcttctcg 446
|| | ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 418 AGCTAAGAAATATCTTAATCTCTCAGACTTCTACTTTCGAACCTGATTCTCTTCTTCTCG 477
Query 447 attcatcgttatcttcttcctctttcgcttcttcttcgCATACCGAGCTTGAAGATG--A 504
||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |
Sbjct 478 ATTCATCGTTATCTTCTTCCTCTTTCGCTTCTTCTTCTCGTACGGAGCTTGAAGATGACA 537
Query 505 --TG-G-TAAC-GT--CGAAGAAGAAGAGCAACAACAACTAGTGGATCTGGTTTTACCAG 557
|| | | || || |||||||||||||||||||| | ||||||||||||||||||||
Sbjct 538 CTTGCGATGACGGTAACGAAGAAGAAGAGCAACAAC-A--AGTGGATCTGGTTTTACCAG 594
Query 558 ATGAG-TCCGGTTCAGATTCCGGTTCGAGACGGTTATCGAGGAGTAGAAGGAGTAATAGC 616
||| | ||||||||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct 595 ATG-GTTCCGGTTCAGATTCCGGTTCGAGACGGTTATCGAGGAGTAGGAGAAGCAATAGC 653
Query 617 AAATCCACAAGCAGTATACGAGAGATCGATCTTGTATCGCCGGAAGCTGTTTCTGATCTG 676
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 654 AAATCCACAAGCAGTATACGAGAGATCGATCTTGTAACACCGGAAGCTGTTTCTGATCTG 713
Query 677 AGATCGATTGCTCAGAGAATGATCGGAGCTGGTTACTCTCGTGAATGTGTTCAGGTATAC 736
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 AGATCGATAGCTCAGAGGATGATCGGAGCTGGTTACTCTCGTGAATGTGTTCAGGTATAC 773
Query 737 GGAAACGTGAGAAAATCCGCCATGGAAATGATTTTTAAGCAGCTAGGGATTGTGAAATTA 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 774 GGAAACGTGAGAAAATCCGCCATGGAAATGATTTTTAAGCAGCTAGGGATTGTGAAACTA 833
Query 797 GGGATTGGAGATGTGCAGAGGCTTGATTGGGAAGCTGTGGAAGTGAAGATCAGAAGATGG 856
|||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 834 GGGATTGGTGATGTGCAGAGACTTGACTGGGAAGCTGTAGAAGTGAAGATCAGAAGATGG 893
Query 857 ATCCGTGCGGCGAAGGTTTGCGTTAGAGTTGTTTTCGCTAGCGAGAAGAGACTCTGTGAA 916
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 ATCCGTGCTGCGAAGGTTTGCGTTAGAGTTGTTTTCGCTAGCGAGAAGAGACTCTGTGAG 953
Query 917 CAAATATTTGAAGGAGCCATGGAAGAGACATGTTTCATGGAGATTGTTAAAAGCTCTGCT 976
|| |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 954 CAGATATTTGAAGGAACCATGGAAGAGACTTGTTTCATGGAGATTGTTAAAACCTCTGCT 1013
Query 977 TTGCAGCTTTTCAATTTCCCTGAAGCTATAAGTATTAGTAGAAGATCACCTGAGAAACTA 1036
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1014 TTGCAGCTTTTTAATTTCCCTGAAGCTATAAGCATTAGTAGAAGATCACCTGAGAAACTA 1073
Query 1037 TTCAAGATTCTTGATTTACATGATGCTTTAACTGATTTGTTGCCTGATATGGAAGAGATT 1096
||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct 1074 TTCAAGATTCTTGATTTACATGATGCTATAACAGATTTGTTACCTGATATGGAAGAGATT 1133
Query 1097 TTCGATTCGAGTTCATCGGAATCGATTCTTGTTCAAGCTACAGAGATTCAATCAAGATTA 1156
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1134 TTCGATTCGAGTTCATCGGAGTCGATTCTTGTTCAAGCTACAGAGATTCAATCAAGATTA 1193
Query 1157 GCTGAAGCAGCAAGAGGGATACTCACTGAGTTTGAGAATGCGGTTTTTCGTGAACCATCG 1216
||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||
Sbjct 1194 GCTGAAGCAGCAAGAGGGATACTTACCGAGTTTGAGAATGCGGTGTTTCGCGAACCTTCG 1253
Query 1217 GTTGTTCCTGTCCCTGGAGGAACTATACATCCTTTGACAAGGTATGTGATGAATTACCTC 1276
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1254 GTTGTTCCTGTCCCTGGAGGAACTATACATCCATTGACAAGGTATGTGATGAATTACCTC 1313
Query 1277 AACTTGATCTCTGACTATAAGGAAACGTTGATTGATCTCATTATGACGAAACCATGTCGG 1336
||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||
Sbjct 1314 AACTTGATCTCTGACTATAGGGAAACGTTGATTGATCTCGTCATGACGAAACCATGTCGG 1373
Query 1337 GGTTTGCAATGTACCAATGATCCAAACAATCCCGATATGGATATCTCTCAGCTTGAAGGA 1396
|||||| ||||||||||||||| |||| |||| ||||||||||||||| |||||||||||
Sbjct 1374 GGTTTGAAATGTACCAATGATCGAAACGATCCGGATATGGATATCTCTGAGCTTGAAGGA 1433
Query 1397 ATATCTCCGTTAGCTTTGCATATGATATGGACAATGGTGATGCTACAATTCAATCTAGAA 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 ATATCTCCGTTAGCTTTGCATATGATATGGACAATGGTGATGCTACAATTCAATCTAGAA 1493
Query 1457 GAGAAGTCTTTGCATTACAAAGATGAACCTTTATCTCACATCTTCGTTATGAACAATGTC 1516
||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct 1494 GAGAAGTCTTTGCATTACAGGGACGAACCTTTATCTCACATCTTCGTCATGAACAATGTC 1553
Query 1517 CATTACATAGTTCAGAAGGTCAAAAGCTCGCCGGAGCTAATGGAGTTGATTGGAGACAAG 1576
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1554 CATTACATAGTTCAGAAGGTCAAAAGCTCTCCGGAGCTAATGGAGTTGATAGGAGACAAG 1613
Query 1577 TATTTAAGAAAGCTTACCGGGATATTTAGACAGGCAGCCACCAAGTATCAGAGAGCTACA 1636
|||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1614 TATTTAAGGAAGCTTACCGGGATATTTAGACAAGCAGCTACCAAGTATCAGAGAGCTACA 1673
Query 1637 TGGGTTAGAGTGTTGAATAGCTTGAGAGATGAAGGATTACATGTGAGCGGAAGCTTCTCT 1696
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1674 TGGGTCAGGGTGTTGAATAGCTTGAGAGATGAAGGATTACATGTGAGCGGAAGCTTCTCT 1733
Query 1697 TCCGGTGTATCAAAGAGTGCTTTAAGAGAGAGGTTTAAAGCTTTCAATACAATGTTTGAA 1756
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 TCCGGTGTATCGAAGAGTGCTTTAAGAGAGAGGTTTAAAGCTTTCAATACAATGTTTGAA 1793
Query 1757 GAGGTTCACAGGATTCAATCGACATGGTCGGTTCCAGATACTCAGCTTAGAGAAGAACTG 1816
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1794 GAGGTTCACAGGATTCAATCGACATGGTCGGTTCCGGATACTCAGCTTAGAGAAGAACTC 1853
Query 1817 AGGATATCTCTATCGGAACATCTTATCCCGGCTTATAGATCCTTTCTTGGAAGATTCAGG 1876
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1854 AGGATATCTCTATCGGAGCATCTTATCCCGGCTTATAGATCCTTTCTTGGAAGATTCAGG 1913
Query 1877 GGACATATAGAGAGCGGAAGACATCCAGAAAACTACTTGAAATACTCTGTTGACAATCTT 1936
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1914 GGACATATAGAGAGCGGAAGACATCCCGAAAACTACTTGAAATACTCTGTTGAAAATCTT 1973
Query 1937 GAAACCGCTGTGTTGGATTTCTTCGAAGGATATACCACAGCTCCACATTTGAGACGGTCT 1996
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1974 GAAACCGCAGTGTTGGATTTCTTCGAAGGATATACCACAGCCCCACATTTGAGACGGTCT 2033
Query 1997 CAGTGA-----------------C---ATAAAGCTTTCGTTTTCGGTTTACCCACATTAG 2036
|||||| | ||||| ||||| |||||||||| ||||||||||
Sbjct 2034 CAGTGAAAGAAGAAGATTGAAAACCCCATAAAACTTTCCTTTTCGGTTTGCCCACATTAG 2093
Query 2037 AATTAACGATATATATCATTCTTTGAATTCTTTCCATTTTAATGTGG-G-CT-TCT-G-G 2091
||||||| || ||||||||||||||||||| ||||||||| |||||| | | | | | |
Sbjct 2094 AATTAACCATTTATATCATTCTTTGAATTCATTCCATTTTCATGTGGTGGCAGTGTTGAG 2153
Query 2092 -T-GAAT---AGTCTTC-----A-----CT-T-A-T-TT--GTACTTGTAAGCATATttg 2130
| | | || |||| | || | | | || |||||||||||||||||||
Sbjct 2154 ATTGTTTTCCAGGCTTCTGGTGAATAGTCTCTCACTCTTTTGTACTTGTAAGCATATTTG 2213
Query 2131 ttgtgtgttgtttgtttgttACCAAATTTCGAT-ACTCCATTGTTGATATAAATGTTTGA 2189
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 2214 TTGTGTGTTGTTTGTTTGTTACCAAATTTC-ATTACTCCATTGTTGATATAAATGTTTG- 2271
Query 2190 TTATTTGTATTTTGTGACTTTTGGTGTACTAGTTTCTTCATAAACACATCTAAATGCAAT 2249
| |||| | |||||||||| |||||||||| |||||||||| ||||||||||||||
Sbjct 2272 T-ATTT-T-----GTGACTTTTGTTGTACTAGTTCCTTCATAAACCCATCTAAATGCAAT 2324
Query 2250 TTGATTTTTT 2259
||||||||||
Sbjct 2325 TTGATTTTTT 2334
> AT3G14090.1 | Symbols: ATEXO70D3, EXO70D3 | exocyst subunit exo70
family protein D3 | chr3:4669253-4671575 REVERSE LENGTH=2238
Length=2238
Score = 1053 bits (570), Expect = 0.0
Identities = 1171/1452 (81%), Gaps = 78/1452 (5%)
Strand=Plus/Plus
Query 574 TTCCGGTTCGAGACGGTTATCGAGGAGTAGAAGGAGTAATAGCAAATCCACAAGCAGTAT 633
||||||||| || |||||| | | || ||||| ||| || || |||||| ||||||||
Sbjct 564 TTCCGGTTCAAGCCGGTTAACTCGTAGAAGAAGCAGT--TA-CAGATCCACTAGCAGTAT 620
Query 634 ACGAGAGATCGATCTTG-TATCGCCGGAAGCTGTTTCTGATCTGAGATCGATTGCTCAGA 692
|||||| || |||| || | ||||||||||| ||||||||||| |||||||||| ||| |
Sbjct 621 ACGAGAAATGGATC-TGATTTCGCCGGAAGCAGTTTCTGATCTAAGATCGATTGTTCA-A 678
Query 693 -GAATGATCGGAGCTGGTTACTCTCGTGAATGTGTTCAGGTATACGGAAAC-GTGAGAAA 750
||||| ||| || |||||||||||||||||| | || || || || ||| || | ||
Sbjct 679 CGAATGGTCGCCGCCGGTTACTCTCGTGAATGTATCCAAGTCTATGG-AACTGTTCGCAA 737
Query 751 ATCCGCCATGGAAATGATTTTTAAGCAGCTAGGGATTGTGAA-ATTAGGGATTGGAGATG 809
||| ||||||||| || ||||||||||| ||||||||||| | || | ||||| ||||
Sbjct 738 ATCAGCCATGGAAGCAATATTTAAGCAGCTTGGGATTGTGAAGA-TAAGCATTGGTGATG 796
Query 810 TGCAGAGGCTTGATTGGGAAGCTGTGGAAGTG-AAGATCA-GAAGATGGATCCGTGCGGC 867
| || |||||||| ||||||| ||| |||| | ||||||| ||| |||||| ||||| ||
Sbjct 797 TTCAAAGGCTTGAGTGGGAAGTTGTTGAAG-GAAAGATCAGGAA-ATGGATTCGTGCTGC 854
Query 868 GAAGGTTTGCGTTAGAGTTGTTTTCGCTAGCGAGAAGAGACTCTGTGAACAAATATTTGA 927
|| |||||| |||||||||||||| |||| ||||||||||| ||||| || | |||||
Sbjct 855 TAAAGTTTGCATTAGAGTTGTTTTCTCTAGTGAGAAGAGACTATGTGAGCAGCTCTTTGA 914
Query 928 ----A---GGA--GCCATGGAAGAGACATGTTTCATGGAGATTGTTAAAAGC-TCTGCTT 977
| | | |||||||| ||||| ||||||||||||| | | || || ||||||
Sbjct 915 TGGTATTTGCACTGCCATGGATGAGACTTGTTTCATGGAGACAG-TGAAGGCTTCTGCTC 973
Query 978 TGCAG-CTTTTCAATTTCCCTGAAGCTATAAGTATTAGTAGAAGATCACCTGAGAAACTA 1036
|| || ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 974 TG-AGACTTTTCACTTTCCCTGAAGCTATAAGTATCAGTAGAAGATCACCTGAGAAGCTG 1032
Query 1037 TTCAAGATTCTTGATTTACATGATGCTTTAACTGATTTGTTGCCTGATATGGAAG-AGAT 1095
|||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||| | ||
Sbjct 1033 TTCAAGATTCTTGATTTACATGATGCTTTAACGGATATGTTGCCGGATATTGAAGCA-AT 1091
Query 1096 -TTTCGATTC-GAGTTCATCGGAAT-CGATTCTTGTTCAAGCTACAGAGATTCAATCAAG 1152
||| || || || |||||| || | | ||| | ||| ||| ||||||||||| ||
Sbjct 1092 CTTT-GACTCAGA-TTCATCAGA-TGCTATTAGAGCTCAGGCTGTTGAGATTCAATCGAG 1148
Query 1153 ATTAGCTGAAGCAGCAAGAGGGATACTCACTGAGTTTGAGAATGCGGTTTTTCGTGAACC 1212
||||| |||||||| ||||| ||||| | |||||||||||||||||| |||| |||||
Sbjct 1149 GTTAGCGGAAGCAGCGAGAGGTATACTTTCGGAGTTTGAGAATGCGGTTCTTCGCGAACC 1208
Query 1213 ATCGGTTGTTCCTGTCCCTGGAGGAACTATACATCCTTTGACAAGGTATGTGATGAATTA 1272
||| | |||||||||||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct 1209 TTCGATAGTTCCTGTCCCTGGAGGAACGATTCATCCATTGACAAGGTATGTGATGAACTA 1268
Query 1273 CCTCAACT-TGATCTCTGACTATAAGGAAACGTTG-ATTGATCTCATTATGACGAAACCA 1330
| | | |||||||||| |||||| |||||||| || |||||||| ||| |||| ||
Sbjct 1269 CATTGT-TATGATCTCTGATTATAAGCAAACGTTGGAT-GATCTCATCATGTCGAATCCC 1326
Query 1331 TGT-CGGGGTT-TGCAATGTACCAATGATCCAAACAATCCCGATATGGATATCTCTCAGC 1388
| | | || || || | | |||| | | | || || ||||||||| || | ||
Sbjct 1327 TCTACTGG-TTCTG-A-T---CCAA--A-C-A--CA--CCGGATATGGATTTCACGGAG- 1371
Query 1389 TTG-A-AGGAATATCTCCGTTAGCTTTGCATATGATATGGACAATGGTGATGCTA-CAAT 1445
||| | || || ||||||||| | ||||||| |||||||| || ||| | || || |
Sbjct 1372 TTGGATAGTAA-ATCTCCGTTGGATTTGCATTTGATATGGTTGATTGTGGT-CTTGCATT 1429
Query 1446 TCAATCT-AGAAGAGAAGTCTTTGCATTACAAAGATGA-ACCTTTATCTCACATCTTCGT 1503
|||| || ||||||||| || ||| || | ||| | | || || ||||||| ||| |
Sbjct 1430 TCAA-CTTAGAAGAGAAATCCAAGCACTATAGAGAC-ACATCTCTAGCTCACATATTCAT 1487
Query 1504 TATGAACAATGTCCATTACATAGTTCAGAAGGTCAAAAGCTCGCCGGAGCTAATG-GAGT 1562
|||||||| |||||||||| |||||||| || ||||| || || || ||| | |||
Sbjct 1488 CATGAACAACATCCATTACATTGTTCAGAAAGTGAAAAGGTCACCAGAACTAC-GAGAGA 1546
Query 1563 TGATTGGAGACAAGTATTTAAG-AAAGCTTACCGGGATATTTAGACAGGCAGCCACCAAG 1621
||||||||||| | |||||||| ||| || || |||||||||||||| || ||||| ||
Sbjct 1547 TGATTGGAGACCATTATTTAAGGAAA-CTCACTGGGATATTTAGACATGCTGCCACAAAC 1605
Query 1622 TATCAGAGAGCTACATGGGTTAGAGTGTTGAATAGCTTGAGAGATGAAGGATTACATGTG 1681
|| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct 1606 TACCAGAGAGCTACATGGGTCAGAGTACTGAATAGTTTGAGAGATGAAGGATTACATGTG 1665
Query 1682 AGCGGAAGCTTCTCTTCCGGTGTATCAAAGA-GTGCTTTAAGAGAGAGGTTTAAAGCTTT 1740
|| || || ||||| || |||||||||| || |||| ||||||||||||||||| || ||
Sbjct 1666 AGTGGGAGTTTCTCCTCAGGTGTATCAA-GAAGTGCATTAAGAGAGAGGTTTAAGGCATT 1724
Query 1741 CAATACAATGTTTGAAGAGGTTCACAGGATTCAATCGACATGGTCGGTTCCAGATACTCA 1800
|||||||||||| |||||||||||||||| ||| || |||||||||||||||||| ||||
Sbjct 1725 CAATACAATGTTCGAAGAGGTTCACAGGACTCAGTCCACATGGTCGGTTCCAGATGCTCA 1784
Query 1801 GCTTAGAGAAGAACTGAGGATATCTCTATCGGAACATCTTATCCCGGCTTATAGATCCTT 1860
||||||||||||||| | ||||| ||||| || ||||| ||||| ||||||||||| ||
Sbjct 1785 GCTTAGAGAAGAACTCCGAATATCGCTATCCGAGCATCTAATCCCTGCTTATAGATCGTT 1844
Query 1861 TCTTGGAAGATTCAGGGGACATATAGAGAGCGGAAGACATCCAGAAAACTACTTGAAATA 1920
||||||||| |||||||| ||||||||||| |||||||| || || ||||| ||||||||
Sbjct 1845 TCTTGGAAGGTTCAGGGGTCATATAGAGAGTGGAAGACACCCTGAGAACTATTTGAAATA 1904
Query 1921 CTCTGTTGACA-ATCTTGAAACCG-CTGTGT-TGGATTTCTTCGAAGGATATACCACAGC 1977
|| ||||| | || | || ||| | || | | |||||||||||||||||||||||| |
Sbjct 1905 TTCGGTTGA-AGATATCGAGACCATC-GT-TCTAGATTTCTTCGAAGGATATACCACACC 1961
Query 1978 TCCACATTTGAG 1989
||||| |||||
Sbjct 1962 ACCACACTTGAG 1973
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112097816985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5