BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474542
Length=2023
Score E
Sequences producing significant alignments: (Bits) Value
AT1G54115.1 | Symbols: ATCCX4, CCX4 | cation calcium exchanger ... 3094 0.0
AT3G14070.1 | Symbols: CAX9, CCX3, ATCCX3 | cation exchanger 9 ... 1631 0.0
> AT1G54115.1 | Symbols: ATCCX4, CCX4 | cation calcium exchanger
4 | chr1:20202118-20204177 FORWARD LENGTH=2060
Length=2060
Score = 3094 bits (1675), Expect = 0.0
Identities = 1913/2024 (95%), Gaps = 32/2024 (2%)
Strand=Plus/Plus
Query 1 ATGAGAGCTGTGAATTTTCTATATAGCTCGAGTAATCCCAAATTTCGGGGGATTTTTAAT 60
|||||||||||||||||| | |||||||||| ||||||||||||||| |||||||| |||
Sbjct 1 ATGAGAGCTGTGAATTTTATGTATAGCTCGAATAATCCCAAATTTCGAGGGATTTTCAAT 60
Query 61 GGGCTTTGTGCAATAGTCCTATTCATCTTCTTCTTTGATCGGAGTGATATACT-CAGGAA 119
|||||||| || ||| |||||||||||||||||||||||| ||| ||||| | ||||||
Sbjct 61 GGGCTTTGCGCTATAATCCTATTCATCTTCTTCTTTGATCAGAGCGATAT-TTACAGGAA 119
Query 120 CCCTTTGTT-AAGGAATCTGTCTTTCGTTGATTCTAGCGGTCAATTCAGTAATGGGTTTA 178
||||||||| || |||||| ||||||||||||||||| ||| |||||| | ||||||||
Sbjct 120 CCCTTTGTTGAA-GAATCTTTCTTTCGTTGATTCTAGTGGTAAATTCAATCGTGGGTTTA 178
Query 179 GCCAGTTTACTGTAATTCGTCGACATTTGAGT---G--G-------T---TCTTCTGGTA 223
|||||||||||||| |||||||||||||||| | | | ||||||||||
Sbjct 179 GCCAGTTTACTGTACCTCGTCGACATTTGAGTGAAGTTGACACTAATGGCTCTTCTGGTA 238
Query 224 ATAGCAGCTTGAGTGGTGATACTACTGTATCTTGCTCTGGGTTACATGAACACAGAGGTT 283
||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||
Sbjct 239 ATAGCAGCTTGAGTGGTGATAGTACTGTATCCTGCTCTGGGTTACATGAACATAGAGGTT 298
Query 284 ATGTTGATCAATGCGAGTTCTTGATATCGAATCCGATTTGTTCTCCAGATGGGTTCTTTG 343
||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||||||
Sbjct 299 ATGCTGATCAATGCGAATTCTTGAAATCGAATCCAATTTGTTCTCCAGATGGCTTCTTTG 358
Query 344 ATTACCTCAAGTTCTTTTACTGCTCCTGCAGAGATTTTAAGATCTTGGGTTATTTAGTGT 403
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 359 ATTACCTCAAGTTCTTTTACTGCTCCTGCAGAGATTTTAAGATCTTGGGTTATATACTGT 418
Query 404 TAGGGGTTTGGCTTGTTGCTTTGTTTTATCTTTTGGGTAATACTGCTGCTGATTACTTTT 463
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 419 TAGGTGTTTGGCTTGTTGCTTTGTTTTATCTGTTGGGTAATACTGCTGCTGATTACTTTT 478
Query 464 GTTGTTCGTTGGAGAAGCTTTCTAAGCTTTTGAGGTTGCCTCCAACTGTTGCTGGTGTTA 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 GTTGTTCGTTGGAGAAGCTTTCTAAGCTTTTGAGGTTGCCTCCAACTGTTGCTGGTGTTA 538
Query 524 CTTTGCTTCCACTTGGTAATGGAGCTCCTGATGTGTTTGCGAGTATAGCTGCTTTTGTTG 583
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 539 CTTTGCTTCCACTTGGTAACGGAGCTCCTGATGTGTTTGCGAGTATAGCTGCTTTTGTTG 598
Query 584 GTTCAGATAAAGGGGAAGTGGGTCTTAACAGCGTCTTGGGTGGTGCGGtgtttgtaactt 643
||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct 599 GTTCAGATAAAGGGGAAGTGGGTCTCAACAGCGTCTTGGGTGGTGCAGTGTTTGTGACTT 658
Query 644 gtgttgttgttgggattgtttctctttgtgttgCGGATAAAGAAGTTAAGATCGATAAGA 703
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 659 GTGTTGTTGTTGGGATTGTTTCACTTTGTGTTGCGGATAAAGAAGTTAAGATTGATAAGA 718
Query 704 AATGTTTCATCAGAGACTTGAGTTTCTTCCTTTTCACATTGGTGGCTTTGATGGTGATTT 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 AATGTTTCATCAGAGACTTGAGTTTCTTCCTTTTCACATTGGTGGCTTTGATGGTGATTT 778
Query 764 TGATGGTCGGTAAGGTGACTGTTGGTATCGCCATTGCGTTTGTCTCGATCTATGTCCTTT 823
||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct 779 TGATGGTTGGTAAGGTGACTGTGGGTATTGCCATTGCGTTTGTCTCGATCTATGTGTTTT 838
Query 824 ATGCTTCTCTCGTGGCTGCGAATGAGATTTTGAGGAAACATTCCAGGAGGTTGAAGCTGG 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 ATGCTTCTCTCGTGGCTGCGAATGAGATTTTGAGGAAACATTCCAGGAGGTTGAAGCTGG 898
Query 884 ATTCTCTTACGCCTTTGCTCCCAATGCAGGGAAGTGTGTTCTCC-CC--AAGTGTTGAAG 940
||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||||
Sbjct 899 ATTCTATTACGCCTTTGCTCCCAATGCAAGGAAGTGTGTTCTCCTCCCCAAGTGTTGAAG 958
Query 941 AGGATATTCCTATGTACAGCCCGTTGCTAGAACTTGACACCGAG-GAAGGTCCACCTCGG 999
|||||||||||||||||||||||||| | || |||||||||| | |||||||||||||||
Sbjct 959 AGGATATTCCTATGTACAGCCCGTTGATGGAGCTTGACACCG-GTGAAGGTCCACCTCGG 1017
Query 1000 CTACATGATTCTCTCCCACAGTGGATGTGGGCTACAAATGTAGCCATCTATTCAAACCAT 1059
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CTACATGATTCTCTACCACAGTGGATGTGGGCTACAAATGTAGCCATCTATTCAAACCAT 1077
Query 1060 TTCGCAAAAGCCAATGTACATGATGAAGAAAGACCTCCATGGGGATGGACCGAAGATGGT 1119
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1078 TTCGCAAAAGCCAATGTTCATGATGAAGAAAGACCTCCATGGGGGTGGACCGAAGATGGT 1137
Query 1120 GCAGAAGTCGAGAGCTCATTATGTTCTAAAATCACATCTTTTCTGGAAACTCCACTGACT 1179
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1138 GCAGAAGTCGAGAGCTCGTTATGTTCTAAAATCACATCTTTGCTGGAAACTCCACTGACT 1197
Query 1180 GTTCCTAGACGGTTGACAATCCCGTTGATTGAGGAAGATAGCTGGTCAAAGACGTATGCG 1239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1198 GTTCCTAGACGGTTGACAATCCCATTGATTGAGGAAGATAGCTGGTCAAAGACGTATGCG 1257
Query 1240 GTGGCTAGTGTCTCGTTGGCTCCTGTCCTACTTTCTTTTCTTTGGAGCAGCCAAGATGAT 1299
||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1258 GTGGCTAGTGTCTCGCTGGCGCCTGTCCTACTTTCCTTTCTTTGGAGCAGCCAAGATGAT 1317
Query 1300 ACGAGTCTTCAAGCTCGGATTGTAGCCTATTTTATCGGAATTGCGATTGGATCTACTCTT 1359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 ACGAGTCTTCAAGCTCGCATTGTAGCCTATTTTATCGGAATTGCGATTGGATCTACTCTT 1377
Query 1360 GGATATCTCGCGTACAAAAACACAGAACCCGATCGTCCACCTCAAAGATACTTAATCCCT 1419
||||||||||||| |||||||||||| ||||| ||||||||||||| ||| |||||||||
Sbjct 1378 GGATATCTCGCGTTCAAAAACACAGAGCCCGACCGTCCACCTCAAATATATTTAATCCCT 1437
Query 1420 TGGGTACTCGGTGGATTCATCATGAGCATCGTATGGTTCTACATGATTGCAAACGAACTC 1479
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TGGGTACTTGGTGGATTCATCATGAGCATCGTATGGTTCTACATGATTGCAAACGAACTT 1497
Query 1480 GTTGCACTTTTGGTTACATTTGGTGGAATCTACGGAATCAACCCGTCGATACTCGGTCTA 1539
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1498 GTTGCACTTTTGGTTACATTTGGTGGAATCTATGGAATCAACCCGTCAATACTCGGTCTA 1557
Query 1540 ACCGTACTTGCTTGGGGAAACTCAATGGGTGACTTAGTGTCGAACATCGCATTGTCGATG 1599
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1558 ACCGTACTTGCTTGGGGAAACTCAATGGGTGACTTAGTGTCAAACATCGCATTGTCAATG 1617
Query 1600 AACGGTGGAGATGGGGTACAAATCGCATTATCGGGTTGCTACGCAGGTCCAATGTTTAAC 1659
|||||||||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct 1618 AACGGTGGAGATGGGGTACAAATCGCGTTGTCTGGTTGCTACGCAGGTCCAATGTTTAAC 1677
Query 1660 ACGCTTGTTGGGTTAGGTATGTCGATGTTTCTTGGTGCTTGGTCGAAGAGTCCAGAGACA 1719
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1678 ACGCTTGTTGGGTTAGGTATGTCGATGTTTCTTGGTGCTTGGTCGAAAAGTCCAGAGACT 1737
Query 1720 TACATGATCCCTGAGGACAATAGCTTGTTCTACACTCTAGGGTTTCTAATATTCGGATTG 1779
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 TACATGATCCCGGAGGACAATAGCTTGTTCTACACTCTAGGGTTTCTAATATTCGGATTG 1797
Query 1780 ATTTGGTCTCTTGTGATGCTCCCACGCAACGAAATGCGACCGAACAAAGTGATGGGAATT 1839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1798 ATTTGGTCTCTTGTGATGCTCCCACGCAACGAAATGCGACCGAACAAAGTGATGGGCATT 1857
Query 1840 GGTCTGATTGCACTGTATCTGATATTCGTCACTTTCAGGCTCAGCTCCGCCATGGGATTC 1899
||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1858 GGTCTTATTACACTGTATCTGATATTCGTCACTTTCAGGCTTAGCTCCGCCATGGGATTC 1917
Query 1900 ATACCTTGGGCTTCTTAAAACGCCATTGTTGCCAGCTTATTGTATACTACTATACATGTT 1959
|||||||||||||||| |||||||||||||||||||||||||||||| | | ||||||
Sbjct 1918 ATACCTTGGGCTTCTTGAAACGCCATTGTTGCCAGCTTATTGTATAC-A-T---CATGTT 1972
Query 1960 GTTAGAGATA--GCC-ACTGGTTCTGAAGTAAATGTTGTTTGTA 2000
|||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1973 GTTAGAGATATAGCCCACTGGTTCTGAAGTAAATGTTGTTTGTA 2016
> AT3G14070.1 | Symbols: CAX9, CCX3, ATCCX3 | cation exchanger
9 | chr3:4661143-4663074 REVERSE LENGTH=1932
Length=1932
Score = 1631 bits (883), Expect = 0.0
Identities = 1623/1970 (82%), Gaps = 91/1970 (5%)
Strand=Plus/Plus
Query 1 ATGAGAGCTGTGAATTTTCTATATAGCTCGAGTAA-TCCCAAATTTCG-GGGGATTTTTA 58
||||| || || | |||||| || ||||||| || ||||||||||| |||| |||| |
Sbjct 1 ATGAGCGCGGTTAGTTTTCTTTACAGCTCGA-AAACCCCCAAATTTCGAGGGG-TTTTCA 58
Query 59 ATGGGCTTTGTGCAATAGTCCTATTCAT-CTTCTTCTTTGATCGGAGTG-ATATACTCAG 116
||||| ||||||| | || || || | |||||||||||||||||| | || |||||||
Sbjct 59 ATGGGATTTGTGCTCTGGTTCTGTT-TTGCTTCTTCTTTGATCGGAGCGAAT-TACTCAG 116
Query 117 GAACCCTTTGTTAAGGAATC-TGTCTTTCGT---TGATTCTAGCGG-TCAA-TTCAGTAA 170
||||||||||||||||| | ||||||||| || | ||| || |||| || | |
Sbjct 117 AAACCCTTTGTTAAGGAA-CGCGTCTTTCGTCAATGGTGGTAGTGGCTCAACCTCCG-GA 174
Query 171 TGGGT-TTAGCCAGTTTACT-GTAATTC---G---T-CGA--C-ATTTG--A-G--TGGT 213
||| | | |||||||| | ||||||| | | ||| | | ||| | | ||||
Sbjct 175 --GGTATCACCCAGTTTA-TGGTAATTCGTAGAAATGCGAGGCAAATTGAAACGAATGGT 231
Query 214 TCTTCTGGTAATAGCAGCTTGAGT-GGTGATACTACTGTATCT-TGCTCTGGGTTACATG 271
||| | |||||||||||||||| | | || |||||| | | ||||| ||||||||
Sbjct 232 TCTGGTAATAATAGCAGCTTGAGTAGCAG-TAGTACTGT-TTTATGCTCAGGGTTACACA 289
Query 272 AACACA-GAGGTTATGTTGATCAATGCGAGTTCTTGATATCGAATCCGATTTGTTCTCCA 330
|||||| | ||||||| |||||||||||||||||| | | | || || |||||||| ||
Sbjct 290 AACACATG-GGTTATGCTGATCAATGCGAGTTCTTAAAAGCAAACCCAATTTGTTCCCCT 348
Query 331 GATGGGTTCTTTGATTACCTCAAG-TTCTTTTACTGCTCCTGCAGAGATTTTAAG-ATCT 388
||||| ||||||||||||||| || ||||||||||||||||| ||||| ||| || ||||
Sbjct 349 GATGGATTCTTTGATTACCTC-AGCTTCTTTTACTGCTCCTGTAGAGA-TTTCAGTATCT 406
Query 389 TGGGTTA-TTTAGTGTTAGGGGTTTGGCTTGTTGCTTTGTTTTATCTTTTGGGTAATACT 447
||||||| | | ||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 407 TGGGTTACATGA-TGTTAGGTGTTTGGCTTGTTGCTTTGTTTTATCTGTTGGGTAATACT 465
Query 448 GCTGCTGATTACTTTTGTTGTTCGTTGGAGAAGCTTTCTAAGCTTTTGAGGTTGCCTCCA 507
||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct 466 GCTGCTGATTACTTTTGTTGTTCACTGGAGAAGCTTTCAAAGCTTTTGAGGCTGCCTCCA 525
Query 508 ACTGTTGCTGGTGTTACTTTGCTTCCACTTGGTAATGGAGCTCCTGATGTGTTTGCGAGT 567
|||||||||||||||||||| ||||| ||||| |||||||| || ||||||||||| |||
Sbjct 526 ACTGTTGCTGGTGTTACTTTACTTCCTCTTGGGAATGGAGCACCAGATGTGTTTGCTAGT 585
Query 568 ATAGCTGCTTTTGTTGGTTCAGATAAAGGGGAAGTGGGTCTTAACAGCGTCTTGGGTGGT 627
|||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||
Sbjct 586 ATAGCTGCTTTTGTTGGTACAGATAAAGGAGAAGTTGGTCTTAACAGCGTCTTGGGTGGT 645
Query 628 GCGGtgtttgtaacttgtgttgttgttgggattgtttctctttgtgttgCGGATAAAGAA 687
|| |||||||| |||| ||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct 646 GCTGTGTTTGTTACTTCTGTTGTTGTAGGGATTGTTTCGCTTTGTGTTGCGGATAAGGAA 705
Query 688 GTTAAGATCGATAAGAAATGTTTCATCAGAGACTTGAGTTTCTTCCTTTTCACA-TTGGT 746
|| |||||||||||||| || |||||||||||||||||||||||||||||| | ||| |
Sbjct 706 GTCAAGATCGATAAGAATTGCTTCATCAGAGACTTGAGTTTCTTCCTTTTCTCGCTTG-T 764
Query 747 GGCTTTGATGGTGATTTTGATGGTCGGTA-AGGTGACTGTT-GGTATCGCCATTGCGTTT 804
| ||||| |||||||||||||||| |||| || |||| || || || ||||| ||||||
Sbjct 765 GTCTTTGCTGGTGATTTTGATGGTTGGTAGAG-TGACAGTCCGG-ATTGCCATCGCGTTT 822
Query 805 GTCTCGATCTATGTCCTTTATGCTTCTC-TCGTGGCTGCGAATGAGATTTTGAGGAAACA 863
||||| || ||||| ||||||||| || | ||||| ||||||| |||| |||| |||||
Sbjct 823 GTCTCAATATATGTGGTTTATGCTT-TCCTTGTGGCAGCGAATGTGATTCTGAGAAAACA 881
Query 864 TTCCAGGAGGTTGAAGCTGGATTCTCTTACGCCTTTGCTCCCAATGCAGGGAAGTGTGTT 923
| | | |||||| || || || ||||||| |||||||| || ||||| |||||||||||
Sbjct 882 TGCTAAGAGGTTTAAACTAGAGGCTCTTACTCCTTTGCTACCTATGCAAGGAAGTGTGTT 941
Query 924 CTCCCCAAGTGTTGAAGAGGATATTCCTATGTACAGCCCGTTGCTAGAA-CTTGACACCG 982
||||| ||||||| ||||||||| || ||| | | ||| ||| ||||| || || || |
Sbjct 942 TTCCCCGAGTGTTGGAGAGGATATGCCAATGAATACCCCCTTGATAGAAACT-GAGACTG 1000
Query 983 AGGAAGGTCCACCTCGGCTACATGATTCTCTCCCACAGTGGATGTGGGC-TACAAATGTA 1041
|||| ||||||||||||||||| || ||| ||| |||||||||||||| | |||||||
Sbjct 1001 AGGATGGTCCACCTCGGCTACA-GAGTCT-TCCT-CAGTGGATGTGGGCGT-CAAATGTG 1056
Query 1042 GCCATCTATTCAAACCATTTCGCAAAAGCCAATGTACATGATGAAGAAAGACCTCCATGG 1101
|||||||||||||||||||||||||||| | ||||||||||||||| || || || |||
Sbjct 1057 GCCATCTATTCAAACCATTTCGCAAAAGTTAGTGTACATGATGAAGACAGGCCACCTTGG 1116
Query 1102 GGATGGACCGAAGATGGTGCAGAAGTCGAGAGCTCATTATGTTCTAAAATCACATCTTT- 1160
||||||| || || ||||||||| |||||||| | |||| ||||| |||| || ||
Sbjct 1117 GGATGGATTGATGACACTGCAGAAGTAGAGAGCTCCTCATGTACTAAATTCACTTCCTTG 1176
Query 1161 TCTGGAAACTCCACTGACTGTTCCTAG-ACGGTTGACAATCCCGTTGATTGAGGAAGATA 1219
| |||||| ||| ||||| |||| || | | || ||||| || | | | || |||||||
Sbjct 1177 T-TGGAAATTCCGCTGACCATTCCAAGGA-GATTAACAATTCCATCGGTCGAAGAAGATA 1234
Query 1220 GC-TGGTCAAAGACGTATGCGGTGGCTAGTGTCTCGTTGGCTCCTGTCCTACTTT--CTT 1276
| ||||||||||| ||||| ||||| || ||||| || || |||||||| ||| | |
Sbjct 1235 -CATGGTCAAAGACATATGCTGTGGCCAGCGTCTCATTAGCGCCTGTCCT--TTTGGCGT 1291
Query 1277 TTCTTTGGAGCAGCCAAGATGATACGAGTCTTCAAGCTCG-GATTGTAGCCTA-TTTTAT 1334
||| ||||| |||||||| ||| |||||| |||||| | | | || || || |||| |
Sbjct 1292 CTCTCTGGAGTAGCCAAGACGATGTGAGTCTCCAAGCTTGTGGT-GTCGCATACTTTT-T 1349
Query 1335 CGGAATTGCGATTGGATCTACTCTTGGATATCTCGCGTACAAAAACACAGAACCCGATCG 1394
| | ||| || || || |||||||| | ||| || ||||||||||||||||| ||||
Sbjct 1350 CAGCGTTGTTATAGGCTCCACTCTTGGCTTTCTGGCTTACAAAAACACAGAACCTGATCA 1409
Query 1395 TCCACCTCAAAGATACTTAATCCCTTGGGTACTCGGTGGATTCATCATGAGCATCGTATG 1454
||||||| ||||| ||| ||||||||||| || ||||| || || ||||||||||||||
Sbjct 1410 CCCACCTCGAAGATTCTTGATCCCTTGGGTTCTTGGTGGGTTTATAATGAGCATCGTATG 1469
Query 1455 GTTCTACATGATTGCAAACGAACTCGTTGCACTTTTGGTTACATTTGGTG-GAATCTACG 1513
|||||||||||| ||||||||||||||||| ||| |||| |||||||||| || | ||||
Sbjct 1470 GTTCTACATGATAGCAAACGAACTCGTTGCTCTTCTGGTGACATTTGGTGAGATT-TACG 1528
Query 1514 GAATCAACCCGTCGATACTCG-GTCTAACCGTACTTGCTTGGGGAAACTCAATGGGTGAC 1572
||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||
Sbjct 1529 GAATCAACCCGTCGATACTTGCG-CTAACAGTACTTGCTTGGGGAAACTCAATGGGTGAC 1587
Query 1573 TTAGTGTCGAACATCGCATTGTCGATGAACGGTGGAGATGGGGTACAAATCGCAT-TATC 1631
||||| ||||| ||||||||| | ||||||||||| ||||| ||||||||||| | ||||
Sbjct 1588 TTAGTATCGAATATCGCATTGACAATGAACGGTGGGGATGGTGTACAAATCGC-TCTATC 1646
Query 1632 GGGTTGCTACGCAGGTCCAATGTTTAACACGCTTGTTGGGTTAGGTATGTCGATG-TTTC 1690
||| |||||||| ||||||||||| ||||| || || ||| |||||||||||||| |||
Sbjct 1647 GGGATGCTACGCCGGTCCAATGTTCAACACACTCGTCGGGCTAGGTATGTCGATGCTTT- 1705
Query 1691 TTGGTGCTTGGTCGAAGAGTCCAGAGACATACATGATCCCTGAGGACAATAGCTTGTTCT 1750
|||| || ||||| |||||||| || ||||||||| | || || ||||| ||| | ||||
Sbjct 1706 TTGGCGCATGGTCCAAGAGTCCTGACACATACATGCTACCAGAAGACAAAAGCCTATTCT 1765
Query 1751 ACACTCTAGGGTTTCTAATATTCGGATTGATTTGGTCTCTTGTGATGCTCCCACGCAACG 1810
|||| || ||||||||| || |||| ||| ||||| || | ||||| ||||| |||||||
Sbjct 1766 ACACACTTGGGTTTCTAGTACTCGGTTTGGTTTGGGCTATGGTGATACTCCCGCGCAACG 1825
Query 1811 AAATGCGACCGAACA-AAG-TGATGG-GAATTGGTCTGATTGCACTGTATCTGATATTCG 1867
| |||| ||| | || || | | || | |||| || |||||| | |||||||||||||
Sbjct 1826 ACATGCAACCTAGCAGAACCTTA-GGTG--TTGGACTCATTGCAATATATCTGATATTCG 1882
Query 1868 TCACTTTCAGGCTCAGCTCCGCCATGGGATTCATACCTTGGGCTTCTTAA 1917
||||||||||||| |||| |||||||||||||||||| |||||| |||||
Sbjct 1883 TCACTTTCAGGCTGAGCTGCGCCATGGGATTCATACCATGGGCTGCTTAA 1932
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100250488365
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5