BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474567
Length=2040
Score E
Sequences producing significant alignments: (Bits) Value
AT1G55130.1 | Symbols: TMN6, AtTMN6 | Endomembrane protein 70 p... 3301 0.0
AT3G13772.1 | Symbols: TMN7, AtTMN7 | transmembrane nine 7 | ch... 2156 0.0
> AT1G55130.1 | Symbols: TMN6, AtTMN6 | Endomembrane protein 70
protein family | chr1:20569654-20572393 FORWARD LENGTH=2041
Length=2041
Score = 3301 bits (1787), Expect = 0.0
Identities = 1956/2040 (96%), Gaps = 1/2040 (0%)
Strand=Plus/Plus
Query 1 ATGGCGATCATGATTCGAATCTACGGCActctcttactctctttcttattcttctcaact 60
|||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||| |||
Sbjct 1 ATGGCGATCAGGATTCGAATCTCCGGAACTCTCTTACTATCTTTCTTATTCTTCTCCACT 60
Query 61 cttcacgctttctatcttcCCGGTGTCGCTCCTCGGGATTTCCAAAAGGGTGATCCTCTA 120
||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct 61 CTTCACGCTTTCTATCTTCCCGGTGTCGCTCCTCGCGATTTTCAGAAGGGTGATCCTCTT 120
Query 121 TATGTCAAAGTGAACAAATTATCGTCTACAAAGACTCAGCTTCCTTATGATTTCTACTAC 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TATGTGAAAGTGAACAAATTATCGTCTACAAAGACTCAGCTTCCTTATGATTTCTACTAC 180
Query 181 CTGAATTACTGTAAGCCTCCGAAGATCTTGAATACCGGTGAAAATTTGGGGGAGGTTCTT 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 181 CTGAATTACTGTAAGCCTCCGAAGATCTTGAATACCGGCGAAAATTTGGGGGAGGTTCTC 240
Query 241 AGAGGAGATCGCATTGAGAATTCGGTTTATACTTTTGAAATGTTGGAGGATCAGCCCTGT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AGAGGAGATCGCATTGAGAATTCGGTTTATACTTTTGAAATGTTGGAGGATCAGCCCTGT 300
Query 301 AGAGTAGGTTGCCGTGTTAGAGTCGATGCTGAGTCTGCTAAAAATTTCAGGGAGAAGATT 360
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 301 AGAGTAGGCTGCCGTGTTAGAGTTGATGCAGAGTCTGCTAAAAATTTCAGGGAAAAGATT 360
Query 361 GATGATGAATACCGAGCTAATATGATTCTTGATAACCTTCCGGTAGCTGTTCTTAGACAA 420
||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||
Sbjct 361 GATTATGAATACCGAGCTAATATGATTCTTGATAATCTTCCAGTAGCTGTTCTTCGACAA 420
Query 421 AGAAAAGATGGAATTCAGTCGACGACTTATGAACATGGTTTCCGTGTTGGCTTCAAAGGG 480
|||||||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||
Sbjct 421 AGAAAAGATGGAATTCAGTCAACGACTTATGAGCATGGTTACCGTGTTGGCTTTAAAGGG 480
Query 481 AGTTACGAAGGGAGTAAAGAGAAAAAATACTTTATCCATAACCATTTGAGTTTCCGAGTC 540
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 481 AGTTATGAAGGGAGTAAAGAGAAAAAATACTTTATCCATAACCACTTGAGTTTCCGAGTC 540
Query 541 ATGTACCACAGAGATCAAGAGTCTGATTCTTCTCGCATTGTTGGTTTTGAGGTTACGCCT 600
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 541 ATGTACCACAGAGACCAAGAGTCTGAATCTTCTCGCATTGTTGGTTTTGAGGTTACGCCT 600
Query 601 AACAGTGTATTGCATGAGTACAAAGATTGGGATGAAAATAATCGTCAGTTAACAACATGC 660
|||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||
Sbjct 601 AACAGTGTATTGCATGAGTACAAAGAGTGGGATGAAAACAATCCCCAATTAACAACATGC 660
Query 661 AACAAAGACACAAAGAATCTGATCCAAAGCAACACTGTTCCTCAAGAAGTTGAGGAAGGA 720
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 661 AACAAAGACACAAAGAATTTGATCCAAAGCAACACTGTTCCTCAAGAAGTCGAGGAAGGA 720
Query 721 AAAGAAATTGTGTTTACATATGATGTCGCCTTTAAGGAGAGTGAAATCAAATGGGCTTCT 780
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 721 AAAGAAATTGTGTTTACATATGATGTCGCCTTTAAGGAGAGTGTTATCAAATGGGCTTCG 780
Query 781 CGATGGGACACATATTTGCTAATGAACGATGATCAAATCCACTGGTTTTCAATCATAAAC 840
|| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 781 CGCTGGGACACATACTTGCTTATGAACGATGATCAAATCCACTGGTTTTCAATCATAAAC 840
Query 841 TCGCTTATGATTGTCCTTTTCCTCTCTGGAATGGTAGCGATGATCATGATGAGAACTTTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TCGCTTATGATTGTCCTTTTCCTCTCTGGAATGGTAGCGATGATCATGATGAGAACTTTA 900
Query 901 TACAAGGATATTTCAAACTACAATCAGCTCGAGACCCAAGACGAGGCTCAGGAAGAAACA 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TACAAGGATATTTCAAACTACAATCAGCTCGAGACCCAAGACGAGGCTCAGGAAGAAACC 960
Query 961 GGATGGAAACTTGTACATGGAGATGTCTTTAGGACGCCCATGAACTCTGGGTTACTGTGT 1020
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GGATGGAAGCTTGTACATGGAGATGTCTTTAGGACGCCCATGAACTCTGGGTTACTGTGT 1020
Query 1021 GTTTATGTCGGCACAGGTCTTCAGATTTTTGGTATGACTCTTGTGACAATGATGTTTGCA 1080
|||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1021 GTTTATGTCGGCACAGGTGTTCAGATTTTCGGTATGACTCTTGTGACAATGATCTTTGCA 1080
Query 1081 TTGCTGGGCTTCTTATCTCCATCCAACAGAGGAGGGCTCATGACTGCCATGGTTCTCTTA 1140
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1081 TTGCTGGGCTTCTTATCTCCATCCAACAGAGGAGGGCTCACGACTGCCATGGTTCTCTTA 1140
Query 1141 TGGGTATTCATGGGCATATTTGCTGGTTACTCATCTTCTCGTCTTCACAAAATGTTCAAA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 TGGGTATTCATGGGCATATTTGCTGGTTACTCATCTTCTCGTCTTCACAAAATGTTCAAA 1200
Query 1201 GGGAATGAGTGGAAAAGAATCACCTTGAAGACTGCATTCATGTTTCCCGGTATACTCTTC 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 GGGAATGAGTGGAAAAGAATCACCTTGAAGACTGCATTCATGTTTCCCGGTATACTCTTC 1260
Query 1261 GCGATCTTCTTCGTTCTCAACACACTCATATGGGGAGAACGATCATCCGGAGCCATTCCC 1320
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1261 GCGATCTTCTTCGTTCTCAACACACTCATATGGGGAGAACGATCATCTGGAGCCATTCCC 1320
Query 1321 TTTGGTACAATGTTTGCTCTTGTCTGTCTCTGGTTTGGAATCTCTGTCCCACTAGTCTTC 1380
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1321 TTTAGTACAATGTTTGCTCTGGTCTGTCTCTGGTTTGGAATCTCTGTCCCACTAGTCTTC 1380
Query 1381 ATAGGTAGCTATCTCGGTCACAAAAAATCTGCAATCGAAGATCCGGTCAAAACTAACAAG 1440
|| |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||
Sbjct 1381 ATTGGTAGCTACCTCGGTCACAAAAAACCAGCAATCGAAGATCCAGTCAAAACTAACAAG 1440
Query 1441 ATCCCGAGACAAGTACCAGAGCAACCTTGGTACATGAAACCTGTTTTTTCCATACTAATT 1500
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1441 ATCCCGAGACAAGTACCAGAGCAACCTTGGTACATGAAACCTGGGTTTTCCATACTAATT 1500
Query 1501 GGAGGAATCCTTCCATTTGGAGCAGTCTTCATTGAGCTCTTCTTCATCCTAACATCAATC 1560
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1501 GGAGGCATCCTTCCATTTGGAGCAGTCTTCATCGAGCTCTTCTTCATCCTAACATCAATC 1560
Query 1561 TGGCTCAACCAATTCTACTACATTTTTGGATTCCTCTTCATCGTGTTCTTGATCTTGATC 1620
|||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1561 TGGCTCAATCAATTCTACTACATCTTCGGATTCCTCTTCATCGTGTTCTTGATCTTGATT 1620
Query 1621 GTGACCTGCGCAGAGATCACAATTGTCCTCTGCTACTTTCAGCTCTGCAGTGAAGACTAC 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 GTGACCTGCGCAGAGATCACAATTGTCCTCTGCTACTTTCAGCTCTGCAGTGAAGACTAC 1680
Query 1681 AATTGGTGGTGGAGAGCTTACCTCACATCAGGCTCATCCTCACTTTACCTCTTCCTTTAC 1740
|||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1681 AATTGGTGTTGGAGAGCATACCTCACATCAGGCTCATCTTCACTTTACCTCTTCCTCTAC 1740
Query 1741 TCGGTCTTCTACTTCTTCACAAAGCTTGAGATCTCAAAACTTGTCTCAGGATTGCTCTAC 1800
|| |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||
Sbjct 1741 TCCGTCTTCTACTTCTTCACAAAGCTTGAGATCTCAAAACTGGTATCAGGAGTGCTCTAC 1800
Query 1801 TTCGGGTACATGATCATTATCTCTTACTCGTTTTTCGTGCTAACCGGCTCAATCGGTTTC 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 TTCGGGTACATGATCATTATCTCTTACTCGTTTTTCGTGCTAACCGGCTCAATCGGTTTC 1860
Query 1861 TACGCATGTTTATGGTTCGTTAGAAAGATCTACTCCTCGGTGAAGATTGACTGAGATTTA 1920
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 1861 TACGCATGTTTGTGGTTCGTTAGAAAGATCTACTCCTCAGTGAAGATTGACTGAGATT-A 1919
Query 1921 GATAAAATGACATAACTTTTGATGCCTCTTGAGGTTTTGTTGGATGGTTTAGTCGTAGTT 1980
| |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1920 GTTAAATTGACATAACTTTTGATGCCTCTTGAGGTTTTGTTGGGTGGTTTAGTTGTAGTT 1979
Query 1981 GAAACAAAAAATTTACCAAATCTTTGTAACGTTTTGATGAATGGATCATGTATTCAAAAC 2040
|||||||| | ||||||||| |||||||| |||||||||||||||| || ||||||||||
Sbjct 1980 GAAACAAATATTTTACCAAACCTTTGTAATGTTTTGATGAATGGATAATATATTCAAAAC 2039
> AT3G13772.1 | Symbols: TMN7, AtTMN7 | transmembrane nine 7 |
chr3:4521532-4524394 REVERSE LENGTH=2106
Length=2106
Score = 2156 bits (1167), Expect = 0.0
Identities = 1667/1912 (87%), Gaps = 19/1912 (1%)
Strand=Plus/Plus
Query 14 TTCGAATCTACGGCActctcttactctc-tttct-t-attcttctcaactcttcacg-ct 69
||||| |||||| ||||||||||||||| ||||| | |||| || | || || || ||
Sbjct 26 TTCGATTCTACGCCACTCTCTTACTCTCTTTTCTCTCTTTCTCCT-TA-TC-TCGCGCCT 82
Query 70 ttctatcttcCCGGTGTCGCTCCTCGGGATTTCCAAAAGGGTGATCCTCTATATGTCAAA 129
|| ||||| || || ||||||||||| |||||||| |||||||||||||| ||||| |||
Sbjct 83 TT-TATCTACCAGGAGTCGCTCCTCGTGATTTCCAGAAGGGTGATCCTCTTTATGTTAAA 141
Query 130 GTGAACAAATTATCGTCTACAAAGACTCAGCTTCCTTATGATTTCTACTACCTGAATTAC 189
|| |||||||| ||||| ||||||||||| ||||||||||| | ||||||||||||||||
Sbjct 142 GTTAACAAATTGTCGTCCACAAAGACTCAACTTCCTTATGACTACTACTACCTGAATTAC 201
Query 190 TGTAAGCCTCCGAAGATCTTGAATACCGGTGAAAATTTGGGGGAGGTTCTTAGAGGAGAT 249
||||||||||| ||||||||||| | | ||| ||||| ||||||||||| ||||| ||
Sbjct 202 TGTAAGCCTCCTAAGATCTTGAACAATGCTGAGAATTTAGGGGAGGTTCTCAGAGGTGAC 261
Query 250 CGCATTGAGAATTCGGTTTATACTTTTGAAATGTTGGAGGATCAGCCCTGTAGAGTAGGT 309
|||||||||||||| |||||||||||| ||||| |||| ||||||||||| | |||||||
Sbjct 262 CGCATTGAGAATTCCGTTTATACTTTTCAAATGCTGGAAGATCAGCCCTGCAAAGTAGGT 321
Query 310 TGCCGTGTTAGAGTCGATGCTGAGTCTGCTAAAAATTTCAGGGAGAAGATTGATGATGAA 369
|||||||||| | | ||||||| || | || ||||||| ||| |||||||||||||||
Sbjct 322 TGCCGTGTTAAACTTAATGCTGACTCCACCAAGAATTTCAAGGAAAAGATTGATGATGAA 381
Query 370 TACCGAGCTAATATGATTCTTGATAACCTTCCGGTAGCTGTTCTTAGACAAAGAAAAGAT 429
||| | |||||||||||||||||||| ||||| |||||||| || |||||||| | ||||
Sbjct 382 TACAGGGCTAATATGATTCTTGATAATCTTCCAGTAGCTGTACTAAGACAAAGGAGAGAT 441
Query 430 GGAATTCAGTCGACGACTTATGAACATGGTTTCCGTGTTGGCTTCAAAGGGAGTTACGAA 489
|||| ||| || |||||||||||||| ||||| ||||||||||| ||||||||||| |||
Sbjct 442 GGAAGTCAATCAACGACTTATGAACACGGTTTTCGTGTTGGCTTTAAAGGGAGTTATGAA 501
Query 490 GGGAGTAAAGAGAAAAAATACTTTATCCATAACCATTTGAGTTTCCGAGTCATGTACCAC 549
||||| |||||| | ||||||||||| ||||| || ||||| ||||||||||||||||||
Sbjct 502 GGGAGCAAAGAGGAGAAATACTTTATACATAATCACTTGAGCTTCCGAGTCATGTACCAC 561
Query 550 AGAGATCAAGAGTCTGATTCTTCTCGCATTGTTGGTTTTGAGGTTACGCCTAACAGTGTA 609
||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||| |
Sbjct 562 AGAGACCAAGAGTCTGATTCTGCTCGAATTGTTGGATTTGAGGTTACGCCTAACAGTATC 621
Query 610 TTGCATGAGTACAAAGATTGGGATGAAAATAATCGTCAGTTAACAACATGCAACAAAGAC 669
|||||||| ||||| || ||||||||||| |||| ||||||||||||||| || || |||
Sbjct 622 TTGCATGAATACAAGGAGTGGGATGAAAAAAATCCTCAGTTAACAACATGTAATAAGGAC 681
Query 670 ACAAAGAATCTGATCCAAAGCAACACTGTTCCTCAAGAAGTTGAGGAAGGAAAAGAAATT 729
|| |||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct 682 ACGAAGAATCTAATCCAAGGCAACACTGTCCCTCAAGAAGTTGAGCAAGGAAAAGAAATA 741
Query 730 GTGTTTACATATGATGTCGCCTTTAAGGAGAGTGAAATCAAATGGGCTTCTCGATGGGAC 789
|||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct 742 GTGTTTACATATGATGTCTCGTTTAAGGAGAGTGAAATCAAATGGGCTTCTCGGTGGGAC 801
Query 790 ACATA-TTTGCTAATGAACGATGATCAAATCCACTGGTTTTCAATCATAAACTCGCTTAT 848
|| || || || ||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct 802 ACGTACCTT-CTCATGAACGATGATCAAATCCACTGGTTTTCCATCATAAATTCACTTAT 860
Query 849 GATTGTCCTTTTCCTCTCTGGAATGGTAGCGATGATCATGATGAGAACTTTATACAAGGA 908
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 861 GATTGTCCTTTTCCTTTCTGGAATGGTAGCCATGATCATGATGAGAACTTTATACAAGGA 920
Query 909 TATTTCAAACTACAATCAGCTCGAGACCCAAGACGAGGCTCAGGAAGAAACAGGATGGAA 968
||| ||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||
Sbjct 921 TATCTCAAACTACAATCAGCTCGAGACCCAAGATGAGGCCCAGGAAGAGACTGGATGGAA 980
Query 969 ACTTGTACATGGAGATGTCTTTAGGACGCCCATGAACTCTGGGTTACTGTGTGTTTATGT 1028
|||||||| ||||||||||| ||| | || |||||||||| ||| |||||||||||||
Sbjct 981 GCTTGTACACGGAGATGTCTTCAGGCCACCGGTGAACTCTGGTTTATTGTGTGTTTATGT 1040
Query 1029 CGGCACAGGTCTTCAGATTTTTGGTATGACTCTTGTGACAATGATGTTTGCATTGCTGGG 1088
|| |||||| ||||||| || || ||| | ||||| |||||||||||||| ||||| ||
Sbjct 1041 TGGTACAGGTGTTCAGATCTTCGGAATGTCACTTGTTACAATGATGTTTGCGTTGCTTGG 1100
Query 1089 CTTCTTATCTCCATCCAACAGAGGAGGGCTCATGACTGCCATGGTTCTCTTATGGGTATT 1148
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 1101 CTTCTTATCTCCATCCAACAGAGGAGGGCTTATGACTGCCATGGTTCTCTTGTGGGTTTT 1160
Query 1149 CATGGGCATATTTGCTGGTTACTCATCTTCTCGTCTTCACAAAATGTTCAAAGGGAATGA 1208
|||||||||||| ||||||||||| || ||||| |||||||||||||||||||| || |
Sbjct 1161 CATGGGCATATTCGCTGGTTACTCCTCGTCTCGCCTTCACAAAATGTTCAAAGGAAACAA 1220
Query 1209 GTGGAAAAGAATCACCTTGAAGACTGCATTCATGTTTCCCGGTATACTCTTCGCGATCTT 1268
|||||| ||||| |||||||||||||||||||||||||||||||| || || || |||||
Sbjct 1221 GTGGAAGAGAATGACCTTGAAGACTGCATTCATGTTTCCCGGTATCCTTTTTGCTATCTT 1280
Query 1269 CTTCGTTCTCAACACACTCATATGGGGAGAAC-GATCATCCGGAGCCATTCCCTTTGGTA 1327
||| ||||| || | || || |||||||||| | ||||| |||||||| || |||||||
Sbjct 1281 CTTTGTTCTGAATGCCCTTATTTGGGGAGAACAG-TCATCTGGAGCCATACCATTTGGTA 1339
Query 1328 CAATGTTTGCTCT-TGTCTGTCTCTGGTTTGGAATCTCTGTCCCACTAGTCTTCATAGGT 1386
||||||||||||| | |||| ||||||||||| ||||| ||||||||||||||| | |||
Sbjct 1340 CAATGTTTGCTCTCT-TCTGCCTCTGGTTTGGCATCTCAGTCCCACTAGTCTTCGTTGGT 1398
Query 1387 AGCTATCTCGGTCACAAAAAATCTGCAATCGAAGATCCGGTCAAAACTAACAAGATCCCG 1446
|||||||| ||| |||| || | ||||| |||||||| |||||||| ||||||||||||
Sbjct 1399 AGCTATCTGGGTTACAAGAAGCCAGCAATTGAAGATCCAGTCAAAACAAACAAGATCCCG 1458
Query 1447 AGACAAGTACCAGAGCAACCTTGGTACATGAAACCTGTTTTTTCCATACTAATTGGAGGA 1506
|| |||||||||||||| || |||||||||||||| ||||| || ||||||||||||||
Sbjct 1459 AGGCAAGTACCAGAGCAGCCGTGGTACATGAAACCAGTTTTCTCTATACTAATTGGAGGC 1518
Query 1507 ATCCTTCCATTTGGAGCAGTCTTCATTGAGCTCTTCTTCATCCTAACATCAATCTGGCTC 1566
|| || || ||||||||||||||||| ||||||||||||||| | ||||| || |||||
Sbjct 1519 ATTCTCCCGTTTGGAGCAGTCTTCATCGAGCTCTTCTTCATCTTGACATCTATATGGCTG 1578
Query 1567 AACCAATTCTACTACATTTTTGGATTCCTCTTCATCGTGTTCTTGATCTTGATCGTGACC 1626
||||| ||||||||||| || || |||||||| || || || |||||||||||||| |||
Sbjct 1579 AACCAGTTCTACTACATCTTCGGGTTCCTCTTTATAGTTTTTTTGATCTTGATCGTCACC 1638
Query 1627 TGCGCAGAGATCACAATTGTCCTCTGCTACTTTCAGCTCTGCAGTGAAGACTACAATTGG 1686
|| |||||||||||| | || ||||||||||| ||||| || || ||||||||||| |||
Sbjct 1639 TGTGCAGAGATCACAGTGGTGCTCTGCTACTTCCAGCTTTGTAGCGAAGACTACAACTGG 1698
Query 1687 TGGTGGAGAGCTTACCTCACAT-CAGGCTCATCCTCACTT-TACCTCTTCCTTTACTCGG 1744
||||||||||||||| | || | | ||||||||| | || ||||||||||| |||||
Sbjct 1699 TGGTGGAGAGCTTACTTAAC-TGCGGGCTCATCCGCT-TTCTACCTCTTCCTCTACTCAA 1756
Query 1745 TCTTCTACTTCTTCACAAAGCTTGAGATCTCAAAACTTGTCTCAGGATTGCTCTACTTCG 1804
|||||||||||||||||||||| |||||| |||| || ||||| ||| ||||||||||||
Sbjct 1757 TCTTCTACTTCTTCACAAAGCTGGAGATCACAAAGCTAGTCTCGGGAATGCTCTACTTCG 1816
Query 1805 GGTACATGATCATTATCTCTTACTCGTTTTTCGTGCTAACCGGCTCAATCGGTTTCTACG 1864
|||||||||| || ||||||||| | || ||||| ||||| ||| ||||||||||||| |
Sbjct 1817 GGTACATGATTATCATCTCTTACGCATTCTTCGTCCTAACTGGCACAATCGGTTTCTATG 1876
Query 1865 CATGTTTATGGTTCGTTAGAAAGATCTACTCCTCGGTGAAGATTGACTGAGA 1916
| || || |||||||| ||||||||||||||||| ||||||||||||| |||
Sbjct 1877 CTTGCTTCTGGTTCGTGAGAAAGATCTACTCCTCAGTGAAGATTGACT-AGA 1927
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101103897630
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5