BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474575
Length=2206
Score E
Sequences producing significant alignments: (Bits) Value
AT1G55200.1 | Symbols: | Protein kinase protein with adenine n... 3038 0.0
AT3G13690.1 | Symbols: | Protein kinase protein with adenine n... 427 2e-118
> AT1G55200.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain | chr1:20589129-20592063
REVERSE LENGTH=2225
Length=2225
Score = 3038 bits (1645), Expect = 0.0
Identities = 2004/2168 (92%), Gaps = 61/2168 (3%)
Strand=Plus/Plus
Query 1 TCTTAAATGAGCAGAGAGAAACAGGAGAAGAGATCAGGTTCCAATGGGACTGAGAAGGTT 60
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 9 TCTTAAATGAGCAGAGAGAAACAGGGGAAGAGATCAGGTTCTAATGGGACTGAGAAGGTT 68
Query 61 CTTGTTGCTGTTAAAGCATCTAGGGAGATTTCAAAGACAGCATTGGTTTGGGCTTTGACT 120
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 69 CTTGTTGCTGTCAAAGCATCTAGGGAGATTTCAAAGACAGCATTTGTTTGGGCCTTGACT 128
Query 121 CATATTGTTCATCCTGGAGATTGCATTACTCTGATTGTTGTTGTCACTTCTCATAATGCT 180
|||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct 129 CATATTGTTCATCCTGGAGATTGCATTACTCTGATTGTTGTTGTTACTTCTTACAATGCT 188
Query 181 GGCCGAAAGCTATGGACTTTCCCGAGGTTCGCTGGAGATTGTGCTACTGGTCATCGGAAA 240
||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||
Sbjct 189 GGCCGAAAGCTATGGACTTTCCCTAGGTTTGCTGGAGATTGTGCTACTGGTCATTGGAAA 248
Query 241 CTGCATTCTGATGCAAT-TCCTGAGATAAAGAGTGATCTCACTGATACTTGTTCCCAAAT 299
|||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 249 CTGCATTCTGATCCAATGT-CTGAGATAAAGAGTGATCTCACTGATACTTGTTCCCAAAT 307
Query 300 GATTCTCCAGCTTCATGATGTCTATGATCCAAACAAGGTTAATGTCAGGATCAAGATTGT 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 308 GATTCTCCAGCTTCATGATGTATATGATCCAAACAAGGTTAATGTCAGGATCAAGATTGT 367
Query 360 TTCTGGATCACCATGTGGAGCTGTTGCGGCTGAGGCCAAGAAATCACAAGCAAATTGGGT 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 368 TTCTGGATCACCATGTGGAGCTGTTGCGGCTGAGGCCAAGAAATCTCAAGCAAATTGGGT 427
Query 420 AGTTCTGGATAAGCACCTTGAGCATGAAAAGAAACGGTGCATAGATGAGCTACAATGTAA 479
|||||| |||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 428 AGTTCTTGATAAGCACCTTAAGCATGAAGAGAAACGGTGCATAGATGAGTTACAATGTAA 487
Query 480 CATTGTGGCAATGAAGCGTTCTCAGGCAAAATTTCTGCGCTTGAACTTGGTCGGGTCACC 539
||||||||| |||||||||||| |||||||| | ||||| ||||||||||||||||| |
Sbjct 488 CATTGTGGCGATGAAGCGTTCTGAGGCAAAAGTCCTGCGGTTGAACTTGGTCGGGTCTTC 547
Query 540 AACGAAGCAACCAGAATTAGCATCTGaaaaaaacaaaaaCAAGTTGTTAGATTCTGTTAA 599
||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 548 AACAAAGGAACCAGAATTAGCATCTGAAAAAAACAAAAACAGGTTGTTAGATTCTGTTAA 607
Query 600 AGCGGTTGTTACATCAACTCCAATGAGCAGTCCTGAGGTTGAGACATCATTCACAGGAAC 659
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 AGCGGTTGTTACAACTACTCCAATGAGCAGTCCTGAGGTTGAGACATCATTCACAGGAAC 667
Query 660 AGAAG-TTGGGACTTCATCAGTTTCTAGCTCTGACCTCGG-AGCATCATCACCTTTTTTC 717
||||| || ||||||||||||| ||||||||||||||||| | ||||||| || |||||
Sbjct 668 AGAAGCTT-GGACTTCATCAGTATCTAGCTCTGACCTCGGTA-CATCATCGCCAGTTTTC 725
Query 718 ACAGCTGAAGTGAAAAAGGATGAAACTTTGGCCATCAAAGAGAATGAATCTGATTCTGAT 777
||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 726 ACAGCTGAAGTGAGAAAGGATGAAACTTTGGTCGTCAAAGAGAATGAATCTGATTCTGAT 785
Query 778 TCAGAGAGCGAAAATGTATCACTACCTTCCACT-AGTATGAGATTACAGCCATGGATATC 836
||||||||||||||| |||||||||||||| | |||| |||||| || |||||||||||
Sbjct 786 TCAGAGAGCGAAAATCTATCACTACCTTCC-TTAAGTAAGAGATTCCAACCATGGATATC 844
Query 837 AGAATATCTTGGCACTCATCGCCTCTC-ATTGCAGGAATCCGAGGAGAGTCTGTGGAAAA 895
|||||||||| |||||||| || |||| | ||||||||| | | |||| ||
Sbjct 845 AGAATATCTTAGCACTCATTGCGTCTCGA-TGCAGGAAT-CAACGAGA------GG---- 892
Query 896 CTGATGATAAGGCTGCTCAAGTTTCAT-CTAAAAAGGCTTTTCTTGAGAAAATTTCTAAG 954
| ||||||||||||| |||||| || | ||||||||||||| ||||||||||||||||||
Sbjct 893 C-GATGATAAGGCTGTTCAAGTATC-TACTAAAAAGGCTTTGCTTGAGAAAATTTCTAAG 950
Query 955 GTTGATGAAGGAGAAGAATCAGCAATGTCAAGTAAAAGGAATGACTTGGAGGAGTTTAGT 1014
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||
Sbjct 951 CTTGATGAAGGAGAAGAAGCAGCTATGTCAAGTAAAAGGAAAGACTTGGAGGAGTATAGT 1010
Query 1015 GGAACCTTAAGAGAAACAATTTCCTTATCACGAAATGCTCCTCCTGTTTCTCCTCCTCTA 1074
||||||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct 1011 GGAACCTTAAGAG---------CGTTATCACGAAATGCTCCTCCTGTTTCACCTCCTCTC 1061
Query 1075 TGTTCTATCTGTCAGCACAAAGCGCCTGTATTTGGAAAACCGCCGAGGTTTTTCTCCTAC 1134
|||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1062 TGTTCTATATGCCAGCACAAAGCGCCTGTATTTGGAAAACCACCGAGGTTTTTCTCCTAC 1121
Query 1135 AAAGAGTTAGAGCTTGCAACAAATGGGTTTTCTCGAGCTAATTTCTTGGCAGAAGGTGGA 1194
||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 1122 AAAGAGTTAGAGCTTGCAACAAACGGGTTTTCGCGAGCTAATTTTTTGGCAGAAGGTGGA 1181
Query 1195 TTTGGATCTGTTCATAGAGGTGTATTACCTGAAGGCCAGATTGTAGCAGTAAAGCAACAC 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TTTGGATCTGTTCATAGAGGTGTATTACCTGAAGGCCAGATTGTAGCAGTAAAGCAACAC 1241
Query 1255 AAACTGGCTAGCACACAAGGAGATGTAGAGTTTTGCTCTGAAGTAGAAGTTTTGAGCTGT 1314
||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 AAAGTGGCCAGTACACAAGGAGATGTAGAGTTTTGCTCTGAAGTAGAAGTTTTGAGCTGT 1301
Query 1315 GCTCAGCATCGAAACGTAGTTATGTTAATCGGTTTCTGCATCGAAGATACCAGAAGACTC 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1302 GCTCAGCATCGAAACGTAGTTATGTTAATCGGTTTCTGCATCGAAGATACCAGAAGACTC 1361
Query 1375 TTGGTCTATGAATACATATGCAATGGATCATTAGACTCTCATCTATACGGTCGCCATAAA 1434
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 TTGGTCTATGAATACATATGCAATGGATCATTAGACTCTCATCTATACGGTCGCCATAAG 1421
Query 1435 GACACTTTGGGTTGGCCTGCAAGGCAAAAAATAGCGGTTGGAGCGGCTCGTGGTCTTCGA 1494
||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1422 GACACTTTGGGATGGCCTGCAAGACAAAAAATAGCGGTTGGAGCGGCTCGAGGTCTTCGA 1481
Query 1495 TATCTTCATGAAGAGTGTAGAGTGGGTTGCATTGTTCATAGAGACATGAGGCCTAACAAT 1554
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1482 TATCTTCATGAAGAGTGTAGAGTAGGTTGCATTGTTCACCGAGACATGAGGCCTAACAAT 1541
Query 1555 ATACTAATAACTCATGATTATGAACCACTGGTTGGTGATTTTGGTTTAGCGCGATGGCAG 1614
|||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1542 ATACTAATTACTCATGATTATGAACCACTGGTTGGAGATTTTGGTTTAGCAAGATGGCAG 1601
Query 1615 CCTGATGGAGAGCTCGGTGTAGACACGCGTGTGATAGGAACTTTTGGTTATTTAGCTCCA 1674
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1602 CCTGATGGAGAGCTAGGTGTAGACACGCGTGTGATAGGAACTTTCGGCTATTTAGCTCCA 1661
Query 1675 GAATATACTCAAAGTGGACAAATCACAGAGAAAGCTGATGTTTACTCGTTCGGGGTTGTA 1734
|| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1662 GAGTATGCTCAAAGTGGACAAATCACAGAGAAAGCCGATGTTTACTCGTTCGGGGTTGTA 1721
Query 1735 TTGGTCGAACTAATCACGGGTCGTAAAGCAATGGATATCTACAGACCAAAGGGACAACAA 1794
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 TTGATCGAACTAATCACGGGTCGTAAAGCAATGGATATCTACAGACCAAAGGGACAACAA 1781
Query 1795 TGTTTAACTGAATGGGCAAGGTCTTTATTAGAAGAGTATGCAGTTGAGGAATTGGTTGAT 1854
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct 1782 TGTTTAACTGAATGGGCAAGATCTTTATTAGAAGAGTATGCGGTTGAGGAATTAGTTGAT 1841
Query 1855 CCGAGGCTCGAAAAGCGATATTCAGAAACAGAAGTCATTTGTATGATTCATACAGCTTCA 1914
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1842 CCGAGGCTCGAAAAGCGATATTCAGAAACACAAGTCATTTGCATGATTCATACAGCTTCA 1901
Query 1915 TTATGTATACGTAAAGATCCACATTTGCGTCCTCGTATGTCTCAGGTGTTGCGTTTATTG 1974
|| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1902 TTGTGTATACGTAGAGATCCACATTTGCGTCCTCGCATGTCTCAGGTGTTGCGTTTATTG 1961
Query 1975 GAAGGAGATATGGTAATGAATGAAATCTCAGGCAGGTTTAACGGA-GA-T-T-----GAG 2026
|||||||||||| ||||||||||||||||||| |||||||| ||| || | | |||
Sbjct 1962 GAAGGAGATATGTTAATGAATGAAATCTCAGGGAGGTTTAATGGAAGACTATCCACTGAG 2021
Query 2027 AAAGGTCTCAGAGGTCATAACTAAT-GC--AG--AG--A-T-TGATCACTTTCTTTT--T 2075
||||||||||||| |||||||||| || | || | | ||||||||||||||| |
Sbjct 2022 AAAGGTCTCAGAGATCATAACTAAAAGCTCAACTAGCCAATCTGATCACTTTCTTTTGGT 2081
Query 2076 ---GT----AGGATCAATACAAGGATTTTGTGTAATCAAAGTCCTCTCTTAATTGACAAT 2128
|| |||||||||| ||| ||||||| |||||||||||||| | ||||||||||
Sbjct 2082 ATAGTGCGTAGGATCAATAGAAGAATTTTGTAAAATCAAAGTCCTCT-T-AATTGACAAT 2139
Query 2129 TATGGTTT 2136
||||||||
Sbjct 2140 TATGGTTT 2147
> AT3G13690.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain | chr3:4485735-4490231
FORWARD LENGTH=3321
Length=3321
Score = 427 bits (231), Expect = 2e-118
Identities = 407/490 (83%), Gaps = 19/490 (4%)
Strand=Plus/Plus
Query 55 AAGGTTCTTGTTGCTGTTAAAGCATCTAGGGAGATTTCAAAGACAGCATTGGTTTGGGCT 114
|||||| ||||||||||||||||||||||||||||| ||||||| || ||| ||||||||
Sbjct 900 AAGGTTATTGTTGCTGTTAAAGCATCTAGGGAGATTCCAAAGACTGCCTTGATTTGGGCT 959
Query 115 TTGACTCATATTGTTCATCCTGGAGATTGCATTACTCTGATTGTTGTTGTCACTTCTCAT 174
||||||||| ||||||| ||||| ||||||||||| || |||||||||||| |||||||
Sbjct 960 TTGACTCATGTTGTTCAGCCTGGGGATTGCATTACCCTTATTGTTGTTGTCCCTTCTCAC 1019
Query 175 AA-TGCTGGCCGAAAGCTAT--GG----AC------TTTCCCGAGGTTCGCTGGAGATTG 221
|| | | || ||||| || | || || |||||| | ||| ||||| |||||
Sbjct 1020 AACT-CCGGACGAAAACTTTGGGGTTTCACTAAGAGTTTCCCTATGTTTGCTGGGGATTG 1078
Query 222 TGCTACTGGTCATCGGAAACT-GCATTCTGATGCAATTCCTGAGA-TAAAGAGTGATCTC 279
||| | ||||||||||||| | |||||||| ||| | || |||| |||| |||||||||
Sbjct 1079 TGCAAGTGGTCATCGGAAA-TCACATTCTGAAGCACTACCGGAGATTAAA-AGTGATCTC 1136
Query 280 ACTGATACTTGTTCCCAAATGATTCTCCAGCTTCATGATGTCTATGATCCAAACAAGGTT 339
||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct 1137 ACTGACACTTGTTCCCAAATGATTCTCCAGCTTCATGATGTCTATGACCCGAATAAGATA 1196
Query 340 AATGTCAGGATCAAGATTGTTTCTGGATCACCATGTGGAGCTGTTGCGGCTGAGGCCAAG 399
||||||| ||| |||||||||||||||||||| |||||||| ||||| |||||| | |||
Sbjct 1197 AATGTCAAGATTAAGATTGTTTCTGGATCACCCTGTGGAGCAGTTGCTGCTGAGTCGAAG 1256
Query 400 AAATCACAAGCAAATTGGGTAGTTCTGGATAAGCACCTTGAGCATGAAAAGAAACGGTGC 459
||| | ||||| || |||||||| |||| || ||||| |||| ||| ||||||||||
Sbjct 1257 AAAGCGCAAGCGAACTGGGTAGTAATGGACAAACACCTCAAGCAGGAAGAGAAACGGTGT 1316
Query 460 ATAGATGAGCTACAATGTAACATTGTGGCAATGAAGCGTTCTCAGGCAAAATTTCTGCGC 519
|| ||||| | ||||| |||||||||| ||||||||||| ||||||||| |||| |||
Sbjct 1317 ATGGATGAATTGCAATGCAACATTGTGGTGATGAAGCGTTCGCAGGCAAAAGTTCTACGC 1376
Query 520 TTGAAC-TTG 528
|| ||| |||
Sbjct 1377 TTAAACCTTG 1386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109437188100
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5