BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474703 Length=690 Score E Sequences producing significant alignments: (Bits) Value AT5G48920.1 | Symbols: TED7 | tracheary element differentiation... 597 4e-170 > AT5G48920.1 | Symbols: TED7 | tracheary element differentiation-related 7 | chr5:19835337-19836122 FORWARD LENGTH=786 Length=786 Score = 597 bits (323), Expect = 4e-170 Identities = 553/656 (84%), Gaps = 48/656 (7%) Strand=Plus/Plus Query 16 ACA-ACACACGCCCAAAATGGCTGCCTCTGTTGACTTCTTCCCCTTTTACCCACCACCGT 74 ||| ||| || |||||||||||||||||||| || | ||| |||| |||| ||||||| | Sbjct 52 ACATACATACTCCCAAAATGGCTGCCTCTGTGGAATACTTTCCCTATTACTCACCACCCT 111 Query 75 CCCATCAACATCCTCTCCCTTCTCCGTTCCCAGCCCCACCGCATCATCCGCCCCCTCCTT 134 ||||||||||||||||||| | | | | ||| | | ||| |||||||||| Sbjct 112 CCCATCAACATCCTCTCCC-T-T-C--T-------CCA--G--T--TCCACCCCCTCCTT 153 Query 135 CCCACATTGT-CCCTCCATCGCCCCCATCTTCTCGTCCCCATTacccaccgcca-c-c-t 190 |||||||| | ||||||| | || |||| ||||| ||| ||| ||||||| ||| | | | Sbjct 154 CCCACATT-TCCCCTCCACCACCTCCATTTTCTCCTCCTCATCACCCACCACCACCACAT 212 Query 191 ccttc-cct-ct--t-tg-gtcctcc-tccacc--a-cctcttccccattcc-ccacc-t 238 ||| ||| || | | || || | |||| | |||| ||| || ||| ||||| Sbjct 213 TTTTCTCCTCCTCATCAGCCACCGCCAT-CACCATATCCTCATCCTCA-TCCGCCACCAC 270 Query 239 c--caccatatcctcGTCCCCATCAGCCACCGCCTCCACCTCACGTTCTTccaccaccac 296 | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 271 CATCACCATATCCTCATCCCCATCAGCCACCGCCTCCACCTCACGTTCTTCCACCACCAC 330 Query 297 ca-c--ca-c--caccGGGGCATCATGTTATCATTGTGGTTGTTATCTCTCTTGGCAGTT 350 || | || | ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 331 CACCAACACCAGCACCGGGGCATCATGTTATCATTGTGGTTGTTATCTCTCTTGGAAGTT 390 Query 351 TGTTCCTTCTTGCATTCCTCGCTGCTGCTCTCTTCTGCTATCTCAAGAAAAGAAGAATGT 410 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 391 TGTTTTTTCTTGCATTCCTCGCTGCTGCTCTCTTCTGCTATCTCAAGAAAAGAAGAAAGT 450 Query 411 CTTCTACAAAGACTGAGATTATCAAGTTTGATGAACACCTCAAAGTCCAAGAAGTCATAG 470 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 451 CTTCTACAAAGGCTGAGATTATCGAGTTTGATGAACACCTCAAAGTCCAAGAAACCATAG 510 Query 471 TGCCAGGACCCCATGGCGAACCAACTAGAGTGGTAATGCTTGAAGAAGACATTCATTTGG 530 ||| ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| Sbjct 511 TGCAAGGACCCCATGGCGAACAAACGAGAGTGGTAATGCTTGAAGAGGACATTCATTTGG 570 Query 531 AAGAGGACATTCACAAGACTGAAAAGCTTAGCAGAGCTAACCATCTCAGTTCAACTGGAG 590 |||||| |||||||||||||||||||||||| | ||| || ||||||||||||||| Sbjct 571 TAGAGGATATTCACAAGACTGAAAAGCTTAGCCGTCCTAGTCACCTCAGTTCAACTGGAA 630 Query 591 GACATGCGATTGATATATCAGATCCCAATCACCACTTTATTGAG-AACAAGGCCTA 645 ||||||| |||||||| |||||||||||||| || |||| |||| || ||| |||| Sbjct 631 GACATGCCATTGATATTTCAGATCCCAATCATCATTTTACTGAGCAA-AAGTCCTA 685 Score = 63.9 bits (34), Expect = 2e-09 Identities = 36/37 (97%), Gaps = 0/37 (0%) Strand=Plus/Plus Query 654 TAAATAAGGTACCAAATCTTGCAATCCAAAACTTGAT 690 |||||| |||||||||||||||||||||||||||||| Sbjct 750 TAAATATGGTACCAAATCTTGCAATCCAAAACTTGAT 786 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33405707755 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5