BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474746
Length=3323
Score E
Sequences producing significant alignments: (Bits) Value
AT1G54710.1 | Symbols: ATATG18H, ATG18H | homolog of yeast auto... 4708 0.0
AT1G54700.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 640 0.0
> AT1G54710.1 | Symbols: ATATG18H, ATG18H | homolog of yeast autophagy
18 (ATG18) H | chr1:20416770-20421035 REVERSE LENGTH=3335
Length=3335
Score = 4708 bits (2549), Expect = 0.0
Identities = 2923/3100 (94%), Gaps = 39/3100 (1%)
Strand=Plus/Plus
Query 1 aaaaagcaaacccaaaaaaaaaaaaaaaacagaaacacaaaaaaaaaaGCAAAGAACCGT 60
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1 AAAAAGCAAACCCAAAAAAAAAAAAAAAACAGAAAC-C--AAAAAAAAGCAAAGAACCGT 57
Query 61 ttcttcttcatcttcatcttcttcttcgcttcgtcttcttcttcttcttcCGTGAAGAAG 120
||||||| |||| ||||| || |||| ||||| ||||||||||||||||||||||||||
Sbjct 58 TTCTTCTCCATCATCATCATCATCTT--CTTCG-CTTCTTCTTCTTCTTCCGTGAAGAAG 114
Query 121 GTC-AAAAACACACCACCGCTTAA-CCCAATTACaaaaaaaaaaTGGCAAAGCTTCACAA 178
||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||
Sbjct 115 GTCAAAAAACACACCACCGCTTAACCCCAATTAC---CAAAAAATGGCAAAGCTTCAAAA 171
Query 179 TTCCTCAAATTAAACAATCTCTTTTAGTTATTTCCCCTTCTTCTTCGTAATCGCCGCCGG 238
|| |||||||||||||||||| |||| ||| || ||||||||||| ||||||||||||
Sbjct 172 TTTCTCAAATTAAACAATCTC-TTTACTTA-TT---CTTCTTCTTCGAAATCGCCGCCGG 226
Query 239 CTTATGCTGTTTCCGA---TTGT-T-ATCTCCGGTGTATCTCCGGTGGTCTCTCCCACGA 293
|||||||||||||||| |||| | |||||||||||||||||||||| ||| ||||||
Sbjct 227 CTTATGCTGTTTCCGATCGTTGTCTCTTCTCCGGTGTATCTCCGGTGGTATCTTCCACGA 286
Query 294 CTAATTTATAATTACTATGAAGAGCAACTCC-A----AA-AT---CAACAACGGAGATAA 344
|||| ||||||||||||||||| |||||| | || || |||||||||||||||
Sbjct 287 AGAATTCATAATTACTATGAAGAGTAACTCCAAGGTCAACATCAACAACAACGGAGATAA 346
Query 345 TCATAATCAAACGAAGAATAATGGTACTAATGGCTTTTTGCCTAATTCGTTAAAATTCAT 404
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 347 TCATAATCAAACGAAGAATAATGGTACTAATGGCTTTTTGCCCAATTCGTTAAAATTCAT 406
Query 405 CTCTACTTGTATCAGAACTGCTTCTTCCGGTGTTCGCTCAGCTAGCGCCTCCGTCGCTGC 464
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 407 CTCTACTTGCATCAGAACTGCTTCCTCCGGTGTTCGCTCAGCTAGCGCCTCCGTCGCTGC 466
Query 465 TTCTCTCTCTTCTGATTCTCATGAGCTTAAAGATCAGGTGTTGTGGTCTTCATTTGATAG 524
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 467 TTCCCTCTCTTCTGATTCTCACGAGCTTAAAGATCAGGTGTTGTGGTCTTCATTTGATAG 526
Query 525 ATTACACACAAGTGAATCTTCTTTCAAGAACGTTCTTTTACTAGGTTATACGAACGGGTT 584
||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||
Sbjct 527 ATTGCACACAAGTGAATCATCTTTCAAGAACGTTCTATTACTAGGTTATACAAACGGGTT 586
Query 585 TCAAGTTCTTGATATCGATGATGCAAGTGATGTTACCGAATTTGTGTCGAGGCGGGATGA 644
|||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||
Sbjct 587 TCAAGTTCTTGATATCGATGATTCAAATGATGTTACCGAATTCGTGTCGAGGCGGGATGA 646
Query 645 TCCGGTTACGTTTTTACAGATGCAGCCATTACCTGCCAAATGTGATGGTGTTGAAGGTTT 704
||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 647 TCCGGTTACATTTTTACAGATGCAGCCATTACCTGCTAAATGTGATGGAGTTGAAGGGTT 706
Query 705 TAGATCATCACATCCTATACTTTTAGCTGTTGCTGATGAGGCTAAAGGTTCAGGTCCTAT 764
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 707 TAGATCATCACATCCTATACTTTTAGCTGTTGCTGATGAAGCTAAAGGTTCAGGTCCTAT 766
Query 765 TGTTACTGGTAGAGATGGATCGGTTAGAAATGGTTATGAGGATCCTCTTGCACTCTCTCC 824
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 767 TGTTACTAGTAGAGATGGATCTGTTAGAAATGGTTATGAGGATCCTCTTGCACTCTCTCC 826
Query 825 CACGGTTGTGCGGTTCTATTCGCTTCGATCTCATAACTATGTTCATGTTTTGAGATTTCG 884
|||||||||||| || ||||||||| |||| ||||||||||||||||||||||| ||| |
Sbjct 827 CACGGTTGTGCGATTTTATTCGCTTAGATCGCATAACTATGTTCATGTTTTGAGGTTTAG 886
Query 885 ATCTACTGTTTATATGGTTAGATGCAGTCCTCGGATTGTCGCTGTTGGCCTTGGTTCGCA 944
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 887 ATCTACTGTTTATATGGTTAGATGCAGTCCTCGGATTGTCGCTGTTGGCCTCGGTTCGCA 946
Query 945 GATATATTGTTTTGATGCTCTAACTCTTGAAAACAAATTCAGCGTCCTTTCGTATCCTGT 1004
|||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct 947 GATATATTGTTTTGATGCGCTAACTCTTGAAAACAAATTCAGTGTCCTCTCGTATCCTGT 1006
Query 1005 ACCTCAGCTTGGAAACCAAGGGATATCTGGGGTTAATGTCGGATATGGTCCAATGGCTGT 1064
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1007 ACCTCAGCTTGGAAACCAAGGGATATCTGGGGTTAATGTTGGATATGGTCCAATGGCTGT 1066
Query 1065 CGGACCTAGATGGTTAGCTTATGCTTCCAATAGTCCTTTGTCATCTAGTATAGGTCGTCT 1124
||| ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1067 CGGGGCTAGATGGTTAGCGTATGCTTCCAATAGTCCCTTGTCTTCTAGTATAGGTCGTCT 1126
Query 1125 GAGCCCTCAGAATGTTACTCCTCCTGGGGTCAGTCCATCTACCTCGCCAAGTAATGGTAA 1184
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1127 GAGCCCTCAGAATGTTACTCCTCCTGGTGTCAGTCCATCTACCTCGCCAAATAATGGTAA 1186
Query 1185 TCTAGTGGCAAGATACGCCATGGAATCTAGTAAGCATTTGGCAGCTGGGTTACTCAATAT 1244
||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1187 TCTGGTGGCAAGATACGCTATGGAATCTAGTAAGCATTTGGCAGCTGGGTTACTCAATTT 1246
Query 1245 GGGTGACAAGAGTTTCAAAACTATAACTAAATACTGTCAAGATCTCAAGCATGATGGTCC 1304
|||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1247 GGGTGACAAGGGTTACAAAACTATATCTAAATACTGTCAAGATCTCAAGCATGACGGTCC 1306
Query 1305 TGGTCCTTCTCTTTCGTCCAGTCCTGGCCGGAAAGTTGGTCGGCTTGCATCTCATTCAGC 1364
||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||||
Sbjct 1307 TGGTCCTTCTCTTTCGTCCAGCCCTGGCCGGAAAGTTGGTCGGGTCGGTTCTCATTCAGC 1366
Query 1365 AGAGTCAGATGTTGTTGGAACGGTAATTGTCAAAGATTTTGAGTCCCGAGCTATTATAGC 1424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1367 TGAGTCAGATGTTGTTGGAACGGTAATTGTCAAAGATTTTGAGTCCCGAGCTATTATAGC 1426
Query 1425 ACAATTCAGGGCTCACACTAGTCCAATTTCTGCTCTCTGTTTCGACCCAAGTGGCACTCT 1484
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
Sbjct 1427 ACAATTCAGGGCTCACACTAGTCCAATCTCTGCTCTCTGTTTCGACCCTAGTGGCACTTT 1486
Query 1485 ACTAGTAACAGCCTCAATCCACGGTAACAATATTAACGTTTTCCGGATTATGCCGTCACC 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1487 ACTAGTAACAGCCTCAATCCACGGTAACAATATTAACGTTTTCCGGATTATGCCGACACC 1546
Query 1545 TACAAAGAATGGAACAGGTGCTCAAAGCTATGATTGGAGCTCCTCCCATGTGCCTCTTTA 1604
||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1547 TACAAAGAATGGACCGGGTGCTCAAAGCTATGATTGGAGCTCTTCCCATGTGCCTCTTTA 1606
Query 1605 CAAACTACATCGTGGCATGACATCAGCTGTAATACAAGATATTTGTTTTAGTAGCTACAG 1664
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1607 CAAACTACATCGTGGCATGACATCAGCTGTGATACAAGATATTTGCTTTAGTAGCTACAG 1666
Query 1665 TCAGTGGATTGCAATTGTATCATCTAAGGGCACCTGCCATATCTATGTTTTGTCTCCGTT 1724
|||||||||||||||||| ||||||||| ||||||||||||| |||||||| || |||||
Sbjct 1667 TCAGTGGATTGCAATTGTTTCATCTAAGAGCACCTGCCATATTTATGTTTTATCCCCGTT 1726
Query 1725 CGGCGGAGAAAATGTTCTTGAAATACGAAACTCTCAATTTGATGGACCAACACTTGCTCC 1784
||| ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 1727 CGGGGGAGAAAATGTTCTTGAAATACGAAACTCTCAATTCGATGGACCGACGCTTGCTCC 1786
Query 1785 AACATTGTCCCTGCCGTGGTGGTCGAGTCCATCGTTTATGACCACCCATTTTTCATATCC 1844
|||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1787 AACATTATCCCTGCCATGGTGGTCAAGTCCGTCGTTTATGACCACCCATTTTTCATATCC 1846
Query 1845 ACCCCCAGCGTCGGTTACTCTTTCTGTGGTTAGCCGAATCAAATGCAACAATTTCTTCCA 1904
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1847 ACCACCAGCGTCAGTTACTCTTTCTGTGGTTAGCCGAATCAAATGCAACAATTTCTTCCA 1906
Query 1905 TGCTGCAAGTTCCGTTGTAGGAAAACCGACCTTCCCCTCTGGCTGTCTTGCTGCTGTTTT 1964
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1907 TGCTGCAAGTTCCGTTGTAGGAAAACCCACCTTCCCCTCTGGCTGTCTTGCTGCTGTTTT 1966
Query 1965 CCATCAATCTGTGCCACATGAATCGCAGTCGTCATCTCATGCCTTGGACTACTTACTGGT 2024
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 1967 CCATCAATCTGTGCCACAAGAATCGCAGTCGTCATCTCCTGCCTTGGACTACTTACTGGT 2026
Query 2025 TTACACCCCATCAGGTCATGTAGTTCAATACAAACTCATTCCATCTCTTGGAGGAGACCA 2084
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2027 TTACACTCCATCAGGTCATGTAGTTCAATACAAACTCATTCCATCTCTTGGAGGAGACCA 2086
Query 2085 GGCTGAGAGCAATACGCGAAATGGAGCAACTTCTGTACTGACTTCTGAAGAGGAACTGAG 2144
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 2087 GGCTGAGAGCAATACGCGAAATGGAGCAACTTCTGGGCTGACCTCTGAAGAGGAACTGAG 2146
Query 2145 AGTGAAAGTTGAACCAGTTCAGTGTTGGGATGTCTGTCGAAGAGCTGATTGGCCAGAGAG 2204
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2147 AGTGAAAGTTGAACCAGTTCAGTGTTGGGATGTCTGTCGAAGAGCGGATTGGCCAGAGAG 2206
Query 2205 AGAGGAGAACATATGTGGGCTTACTTATGGTGGACGAAACATTGCAGAGCAAACCGTTGA 2264
|||||||||||||| ||||||||||||||||||||||| | ||| ||| ||| |||||
Sbjct 2207 GGAGGAGAACATATGCGGGCTTACTTATGGTGGACGAAAAAATGCTGAGTTAACTGTTGA 2266
Query 2265 TACCTCTGATAGTGAAGACT-TAACAAAGCCTCTGGAGAAACACCATGTTTATCTTGCCA 2323
||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 2267 TACTTCTGATAGTGAAGA-TCAAACAAAGCCTCTGGAGAAACACCATGTTTATCTTGCCA 2325
Query 2324 ATGCAGAGGTGCTGATAAACTCCGGAAGAAAACCAATCTGGCAAAATTCAGAGATATCCT 2383
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2326 ATGCAGAGGTGCTGATAAACTCCGGAAGAAAACCAATCTGGCAAAATTCAGAGATATCTT 2385
Query 2384 TCTATCCGATGTTTCCACCAGACTCTGATGGCAAGAACCTGAATTCGCATCAAGGTGGTG 2443
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2386 TCTATCCGATGTATCCACCAGACTCTGATGGCAAGAACCTGAATTCGCATCAAGGTGGTG 2445
Query 2444 GGGAGACAGAAATCGGGAAAGTATCAGCGAATGAGGTTGACATTAGGCGGAAGGAT-TTG 2502
||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||
Sbjct 2446 GGGAGACAGAAATCGGGAAAGTATCTGCGAACGAGGTTGACATTAGGCGAAAGGATCTT- 2504
Query 2503 CTGCCGGTGTATGATAATTTTCACAGTGTGTATACCAGTATGCGCAACAGAGGATTTTCT 2562
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2505 CTGCCGGTATATGATAATTTTCACAGTGTGTATACCAGTATGCGCAACAGAGGATTTTCT 2564
Query 2563 GCGGAAAGAGATTCAGATTCAACTTCTTCTTCAGATCCC-GGACAAGTTAAAGAAATTCA 2621
| |||||||||||||||||| |||||||||| || ||| ||||||||||||||||| ||
Sbjct 2565 GGGGAAAGAGATTCAGATTCTTCTTCTTCTTCTGA-CCCTGGACAAGTTAAAGAAATGCA 2623
Query 2622 TCCATTCAATGGTATGGCTTACCCCGAGGATGTGGAAAGTAGAGGAAGTGCCCATTTTGC 2681
||||||||||||||||| ||||||||| |||| |||||| ||||| ||||||||||||||
Sbjct 2624 TCCATTCAATGGTATGGTTTACCCCGAAGATGAGGAAAGAAGAGGGAGTGCCCATTTTGC 2683
Query 2682 ACTAACTCCAAAACAAAATCCTCATACCGGGATTGTAACATTTAAACAGCCTGTAGTTTC 2741
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2684 ACTAACTCCAAACCAAAATCCTCATACCGGAATTGTAACATTTAAACAGCCTGTAGTTTC 2743
Query 2742 CATTTCTTCTGCTGTGAAAGACACTGATTATATAGACGACG-C--TCATCTCTTGCCAAA 2798
||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||
Sbjct 2744 CATTTCTTCTGCTGTGAAAGACACTGATTATATAGACGACGACGCTCATGTCTTGCCAAA 2803
Query 2799 GAACACCTCCCTGCCCGCTGAAACAAGAATTGAAAACAGCAGCGGGATAAGTGGAGATTC 2858
|||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 2804 GAACGCCTCCCTGCCCGCTGAAACAAAAATTGAAAACAGCAGTGGGATAAGTGGAGATTC 2863
Query 2859 AAATGTAAGTTCTAACCGTTCTGATATGAGCATGAATGCAGCTGGCGAGGGTGAAGGACC 2918
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 2864 AAATGTAAGTTCTAACCGTTCTGATATGAGCATGAATGCAGCAGACGAGGGTGAAGGACC 2923
Query 2919 CATTGATGGCTCCCCAAATTTCGAGCAGTTTTTCAAGGAGGTGATCTCCAATGAAACTGT 2978
|||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||
Sbjct 2924 CATTGACGGCTCCCCAAACTTCGAGCAGTTTTTCGAGGAGGTGGTCTCCAATGAAACTGT 2983
Query 2979 TACAGAAACTGAGCATAAGGATGCTCCATCTGATGGAAAACTCGATGATGATGACGAGGA 3038
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 2984 TACAGAAACTGAGCATAAGGATGCTCCATCTGATGGAAAACTCGATGATGATGAGGACGA 3043
Query 3039 TGACATGCTTGGTGGTGTTTTCGCTTTCTCCGAAGAAGGT 3078
||||||||||||||||||||||||||||||||||||||||
Sbjct 3044 TGACATGCTTGGTGGTGTTTTCGCTTTCTCCGAAGAAGGT 3083
Score = 326 bits (176), Expect = 1e-87
Identities = 212/227 (93%), Gaps = 11/227 (5%)
Strand=Plus/Plus
Query 3106 GTTGAGTTTAGTTAAATCTATGGCC----AAAGCTCTAATGGAGAAGGGGTCACTTACTA 3161
|||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct 3082 GTTGAGTTTAGTTAAA-CTATGGCCAAAGAAAGCTCTAATGGAGAAGGGGTCACATACTA 3140
Query 3162 ATCCCGTTTGCTGCAAC--TTACTCACTGATGATC-TTAATTCCCTGaaaaaaaaaCTTT 3218
||||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||| ||
Sbjct 3141 ATCCCGTTTGCTGCAACTTTTACTCACTGATGATCTTTAATACCCTGAAAAAATAACATT 3200
Query 3219 TAAAATCAATTTCTTTTATCATCTGTTTCTGTAAATGCTTGTAAATG-AATTGTTCATTA 3277
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 3201 TAAAATCAATTTCTTTTATCATCTGTTTCTGTAAATGCTTGTAAATGTAA-TGTTCATTA 3259
Query 3278 TCAACAGTCTCTCGATTTCCATGGACTGTTTCTTTGTAAt-tttttt 3323
|||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3260 TCAACAGTCTCTCGATTTCCATGGACTGTTTCTTTGTAATCTTTTTT 3306
> AT1G54700.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s: Serine endopeptidase
DegP2 (InterPro:IPR015724); BEST Arabidopsis thaliana protein
match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78
Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). | chr1:20415898-20417506
FORWARD LENGTH=914
Length=914
Score = 640 bits (346), Expect = 0.0
Identities = 388/408 (95%), Gaps = 3/408 (1%)
Strand=Plus/Minus
Query 2701 CCTCATACCGGGATTGTAACATTTAAACAGCCTGTAGTTTCCATTTCTTCTGCTGTGAAA 2760
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 CCTCATACCGGAATTGTAACATTTAAACAGCCTGTAGTTTCCATTTCTTCTGCTGTGAAA 855
Query 2761 GACACTGATTATAT--A-GACGACGCTCATCTCTTGCCAAAGAACACCTCCCTGCCCGCT 2817
|||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||||
Sbjct 854 GACACTGATTATATAGACGACGACGCTCATGTCTTGCCAAAGAACGCCTCCCTGCCCGCT 795
Query 2818 GAAACAAGAATTGAAAACAGCAGCGGGATAAGTGGAGATTCAAATGTAAGTTCTAACCGT 2877
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 794 GAAACAAAAATTGAAAACAGCAGTGGGATAAGTGGAGATTCAAATGTAAGTTCTAACCGT 735
Query 2878 TCTGATATGAGCATGAATGCAGCTGGCGAGGGTGAAGGACCCATTGATGGCTCCCCAAAT 2937
||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct 734 TCTGATATGAGCATGAATGCAGCAGACGAGGGTGAAGGACCCATTGACGGCTCCCCAAAC 675
Query 2938 TTCGAGCAGTTTTTCAAGGAGGTGATCTCCAATGAAACTGTTACAGAAACTGAGCATAAG 2997
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 674 TTCGAGCAGTTTTTCGAGGAGGTGGTCTCCAATGAAACTGTTACAGAAACTGAGCATAAG 615
Query 2998 GATGCTCCATCTGATGGAAAACTCGATGATGATGACGAGGATGACATGCTTGGTGGTGTT 3057
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 614 GATGCTCCATCTGATGGAAAACTCGATGATGATGAGGACGATGACATGCTTGGTGGTGTT 555
Query 3058 TTCGCTTTCTCCGAAGAAGGTAAAAAGAATCCATCCCATATCCCGTAA 3105
||||||||||||||||||||||| |||||| ||||||||| || ||||
Sbjct 554 TTCGCTTTCTCCGAAGAAGGTAAGAAGAATACATCCCATAGCCTGTAA 507
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 165350244128
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5